+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ ulimit -s 8388608
+ run_scripts/run_cesm_uwm_coarse_res_gpu_no_silhs.sh
----- Case Setup -----
Compset longname is 2000_CAM70_CLM60%SP_CICE%PRES_DOCN%DOM_MOSART_SGLC_SWAV
Compset specification file is /home/jenkins/workspace/cam_gpu_test/cime_config/config_compsets.xml
Automatically adding SESP to compset
Compset forcing is 1972-2004
ATM component is CAM cam7 physics:
LND component is clm6.0:Satellite phenology:
ICE component is Sea ICE (cice) model version 6 :prescribed cice
OCN component is DOCN prescribed ocean mode
ROF component is MOSART: MOdel for Scale Adaptive River Transport
GLC component is Stub glacier (land ice) component
WAV component is Stub wave component
ESP component is Stub external system processing (ESP) component
Pes specification file is /home/jenkins/workspace/cam_gpu_test/cime_config/config_pes.xml
Machine is larson-group
Pes setting: grid match is a%ne3np4
Pes setting: grid is a%ne3np4.pg3_l%ne3np4.pg3_oi%ne3np4.pg3_r%r05_g%null_w%null_z%null_m%gx3v7
Pes setting: compset is 2000_CAM70_CLM60%SP_CICE%PRES_DOCN%DOM_MOSART_SGLC_SWAV_SESP
Pes setting: tasks is {'NTASKS_ATM': 24, 'NTASKS_LND': 24, 'NTASKS_ROF': 24, 'NTASKS_ICE': 24, 'NTASKS_OCN': 24, 'NTASKS_GLC': 24, 'NTASKS_WAV': 24, 'NTASKS_CPL': 24}
Pes setting: threads is {'NTHRDS_ATM': 1, 'NTHRDS_LND': 1, 'NTHRDS_ROF': 1, 'NTHRDS_ICE': 1, 'NTHRDS_OCN': 1, 'NTHRDS_GLC': 1, 'NTHRDS_WAV': 1, 'NTHRDS_CPL': 1}
Pes setting: rootpe is {'ROOTPE_ATM': 0, 'ROOTPE_LND': 0, 'ROOTPE_ROF': 0, 'ROOTPE_ICE': 0, 'ROOTPE_OCN': 0, 'ROOTPE_GLC': 0, 'ROOTPE_WAV': 0, 'ROOTPE_CPL': 0}
Pes setting: pstrid is {}
Pes other settings: {}
Pes comments: none
setting additional fields from config_pes: {}
Compset is: 2000_CAM70_CLM60%SP_CICE%PRES_DOCN%DOM_MOSART_SGLC_SWAV_SESP
Grid is: a%ne3np4.pg3_l%ne3np4.pg3_oi%ne3np4.pg3_r%r05_g%null_w%null_z%null_m%gx3v7
Components in compset are: ['cam', 'clm', 'cice', 'docn', 'mosart', 'sglc', 'swav', 'sesp']
No project info available
No charge_account info available, using value from PROJECT
cesm model version found: cam_4ncar_20240605_2f3c896-789-g82bbae0f
Batch_system_type is none
Creating Case directory /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc
ERROR: Unknown Job Queue specified use --force to set
Creating batch scripts
Writing case.run script from input template /home/jenkins/workspace/cam_gpu_test/ccs_config/machines/template.case.run
Creating file .case.run
Writing case.st_archive script from input template /home/jenkins/workspace/cam_gpu_test/ccs_config/machines/template.st_archive
Creating file case.st_archive
Creating user_nl_xxx files for components and cpl
Running cam.case_setup.py
If an old case build already exists, might want to run 'case.build --clean' before building
You can now run './preview_run' to get more info on how your case will be run
----- Compile Configuration -----
----- Compile -----
Building case in directory /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc
sharedlib_only is False
model_only is False
Generating component namelists as part of build
2025-04-24 10:39:36 atm
Create namelist for component cam
Calling /home/jenkins/workspace/cam_gpu_test/cime_config/buildnml
...calling cam buildcpp to set build time options
CAM namelist copy: file1 /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc/Buildconf/camconf/atm_in file2 /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/run/atm_in
2025-04-24 10:39:36 lnd
Create namelist for component clm
Calling /home/jenkins/workspace/cam_gpu_test/components/clm//cime_config/buildnml
2025-04-24 10:39:36 ice
Create namelist for component cice
Calling /home/jenkins/workspace/cam_gpu_test/components/cice//cime_config/buildnml
RUN: /home/jenkins/workspace/cam_gpu_test/components/cice/bld/generate_cice_decomp.pl -ccsmroot /home/jenkins/workspace/cam_gpu_test -res ne3np4.pg3 -nx 486 -ny 1 -nproc 1 -thrds 1 -output all
FROM: /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc
output: 486 1 486 1 1 roundrobin square-ice
2025-04-24 10:39:37 ocn
Create namelist for component docn
Calling /home/jenkins/workspace/cam_gpu_test/components/cdeps/docn/cime_config/buildnml
docn_mode is prescribed
2025-04-24 10:39:37 rof
Create namelist for component mosart
Calling /home/jenkins/workspace/cam_gpu_test/components/mosart//cime_config/buildnml
2025-04-24 10:39:37 glc
Create namelist for component sglc
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sglc/cime_config/buildnml
2025-04-24 10:39:37 wav
Create namelist for component swav
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/swav/cime_config/buildnml
2025-04-24 10:39:37 esp
Create namelist for component sesp
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sesp/cime_config/buildnml
2025-04-24 10:39:37 cpl
Create namelist for component drv
Calling /home/jenkins/workspace/cam_gpu_test/components/cmeps/cime_config/buildnml
Writing nuopc_runconfig for components ['CPL', 'ATM', 'LND', 'ICE', 'OCN', 'ROF']
Building gptl with output to file /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/gptl.bldlog.250424-103936
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/build_scripts/buildlib.gptl
Building pio with output to file /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/pio.bldlog.250424-103936
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/build_scripts/buildlib.pio
Building csm_share with output to file /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/csm_share.bldlog.250424-103936
Calling /home/jenkins/workspace/cam_gpu_test/share/buildlib.csm_share
Building CDEPS with output to file /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/CDEPS.bldlog.250424-103936
Calling /home/jenkins/workspace/cam_gpu_test/components/cdeps/cime_config/buildlib
- Building clm library
Building lnd with output to /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/lnd.bldlog.250424-103936
clm built in 589.638825 seconds
- Building atm Library
Building atm with output to /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/atm.bldlog.250424-103936
- Building ice Library
Building ice with output to /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/ice.bldlog.250424-103936
- Building ocn Library
Building ocn with output to /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/ocn.bldlog.250424-103936
- Building rof Library
Building rof with output to /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/rof.bldlog.250424-103936
docn built in 0.457535 seconds
mosart built in 92.118359 seconds
cice built in 243.842863 seconds
cam built in 769.885929 seconds
Building cesm from /home/jenkins/workspace/cam_gpu_test/components/cmeps/cime_config/buildexe with output to /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/cesm.bldlog.250424-103936
Total build time: 1679.020981 seconds
MODEL BUILD HAS FINISHED SUCCESSFULLY
----- Run configuration -----
----- Run Submission -----
2025-04-24 11:07:38 atm
Create namelist for component cam
Calling /home/jenkins/workspace/cam_gpu_test/cime_config/buildnml
CAM namelist copy: file1 /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc/Buildconf/camconf/atm_in file2 /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/run/atm_in
2025-04-24 11:07:38 lnd
Create namelist for component clm
Calling /home/jenkins/workspace/cam_gpu_test/components/clm//cime_config/buildnml
2025-04-24 11:07:38 ice
Create namelist for component cice
Calling /home/jenkins/workspace/cam_gpu_test/components/cice//cime_config/buildnml
RUN: /home/jenkins/workspace/cam_gpu_test/components/cice/bld/generate_cice_decomp.pl -ccsmroot /home/jenkins/workspace/cam_gpu_test -res ne3np4.pg3 -nx 486 -ny 1 -nproc 1 -thrds 1 -output all
FROM: /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc
output: 486 1 486 1 1 roundrobin square-ice
2025-04-24 11:07:39 ocn
Create namelist for component docn
Calling /home/jenkins/workspace/cam_gpu_test/components/cdeps/docn/cime_config/buildnml
docn_mode is prescribed
2025-04-24 11:07:39 rof
Create namelist for component mosart
Calling /home/jenkins/workspace/cam_gpu_test/components/mosart//cime_config/buildnml
2025-04-24 11:07:39 glc
Create namelist for component sglc
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sglc/cime_config/buildnml
2025-04-24 11:07:39 wav
Create namelist for component swav
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/swav/cime_config/buildnml
2025-04-24 11:07:39 esp
Create namelist for component sesp
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sesp/cime_config/buildnml
2025-04-24 11:07:39 cpl
Create namelist for component drv
Calling /home/jenkins/workspace/cam_gpu_test/components/cmeps/cime_config/buildnml
Writing nuopc_runconfig for components ['CPL', 'ATM', 'LND', 'ICE', 'OCN', 'ROF']
Checking that inputdata is available as part of case submission
Loading input file list: 'Buildconf/ctsm.input_data_list'
Loading input file list: 'Buildconf/docn.input_data_list'
Loading input file list: 'Buildconf/mosart.input_data_list'
Loading input file list: 'Buildconf/cam.input_data_list'
Loading input file list: 'Buildconf/cpl.input_data_list'
Loading input file list: 'Buildconf/cice.input_data_list'
Check case OK
submit_jobs case.run
Submit job case.run
Starting job script case.run
Generating namelists for /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc
2025-04-24 11:07:40 atm
Create namelist for component cam
Calling /home/jenkins/workspace/cam_gpu_test/cime_config/buildnml
CAM namelist copy: file1 /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc/Buildconf/camconf/atm_in file2 /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/run/atm_in
2025-04-24 11:07:40 lnd
Create namelist for component clm
Calling /home/jenkins/workspace/cam_gpu_test/components/clm//cime_config/buildnml
2025-04-24 11:07:40 ice
Create namelist for component cice
Calling /home/jenkins/workspace/cam_gpu_test/components/cice//cime_config/buildnml
RUN: /home/jenkins/workspace/cam_gpu_test/components/cice/bld/generate_cice_decomp.pl -ccsmroot /home/jenkins/workspace/cam_gpu_test -res ne3np4.pg3 -nx 486 -ny 1 -nproc 1 -thrds 1 -output all
FROM: /home/jenkins/cam_output/caseroot/UWM_ne3_gpu_no_stats_larson-group_nvhpc
output: 486 1 486 1 1 roundrobin square-ice
2025-04-24 11:07:40 ocn
Create namelist for component docn
Calling /home/jenkins/workspace/cam_gpu_test/components/cdeps/docn/cime_config/buildnml
docn_mode is prescribed
2025-04-24 11:07:40 rof
Create namelist for component mosart
Calling /home/jenkins/workspace/cam_gpu_test/components/mosart//cime_config/buildnml
2025-04-24 11:07:40 glc
Create namelist for component sglc
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sglc/cime_config/buildnml
2025-04-24 11:07:40 wav
Create namelist for component swav
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/swav/cime_config/buildnml
2025-04-24 11:07:40 esp
Create namelist for component sesp
Calling /home/jenkins/workspace/cam_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sesp/cime_config/buildnml
2025-04-24 11:07:40 cpl
Create namelist for component drv
Calling /home/jenkins/workspace/cam_gpu_test/components/cmeps/cime_config/buildnml
Writing nuopc_runconfig for components ['CPL', 'ATM', 'LND', 'ICE', 'OCN', 'ROF']
-------------------------------------------------------------------------
- Prestage required restarts into /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/run
- Case input data directory (DIN_LOC_ROOT) is /home/pub/cam_inputdata
- Checking for required input datasets in DIN_LOC_ROOT
-------------------------------------------------------------------------
run command is mpirun -np 1 /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/cesm.exe >> cesm.log.$LID 2>&1
Exception from case_run: ERROR: RUN FAIL: Command 'mpirun -np 1 /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/bld/cesm.exe >> cesm.log.$LID 2>&1 ' failed
See log file for details: /home/jenkins/cam_output/scratch/UWM_ne3_gpu_no_stats_larson-group_nvhpc/run/cesm.log.250424-110739
Submitted job case.run with id None
Error submitting run
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