Console Output
+ source /etc/profile
++ '[' '' ']'
++ '[' -d /etc/profile.d ']'
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/01-locale-fix.sh ']'
++ . /etc/profile.d/01-locale-fix.sh
++++ /usr/bin/locale-check C.UTF-8
+++ eval
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/apps-bin-path.sh ']'
++ . /etc/profile.d/apps-bin-path.sh
+++ snap_bin_path=/snap/bin
+++ '[' -n '' ']'
+++ '[' -z /var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/ ']'
+++ snap_xdg_path=/var/lib/snapd/desktop
+++ '[' -n /var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/ ']'
+++ '[' -n /var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/ ']'
+++ export XDG_DATA_DIRS=/var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/:/var/lib/snapd/desktop
+++ XDG_DATA_DIRS=/var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/:/var/lib/snapd/desktop
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/bash_completion.sh ']'
++ . /etc/profile.d/bash_completion.sh
+++ '[' 'x5.1.16(1)-release' '!=' x -a x '!=' x -a x = x ']'
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/cedilla-portuguese.sh ']'
++ . /etc/profile.d/cedilla-portuguese.sh
+++ '[' '' = pt -a en '!=' pt ']'
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/debuginfod.sh ']'
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/flatpak.sh ']'
++ . /etc/profile.d/flatpak.sh
+++ command -v flatpak
++++ unset G_MESSAGES_DEBUG
++++ echo /home/jenkins/.local/share/flatpak
++++ GIO_USE_VFS=local
++++ flatpak --installations
++++ new_dirs=
++++ read -r install_path
++++ share_path=/home/jenkins/.local/share/flatpak/exports/share
++++ case ":$XDG_DATA_DIRS:" in
++++ new_dirs=/home/jenkins/.local/share/flatpak/exports/share
++++ read -r install_path
++++ share_path=/var/lib/flatpak/exports/share
++++ case ":$XDG_DATA_DIRS:" in
++++ :
++++ read -r install_path
++++ echo /home/jenkins/.local/share/flatpak/exports/share
+++ new_dirs=/home/jenkins/.local/share/flatpak/exports/share
+++ export XDG_DATA_DIRS
+++ XDG_DATA_DIRS=/home/jenkins/.local/share/flatpak/exports/share:/var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/:/var/lib/snapd/desktop
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/gnome-session_gnomerc.sh ']'
++ . /etc/profile.d/gnome-session_gnomerc.sh
+++ '[' '' = wayland ']'
+++ '[' -z /home/jenkins/.local/share/flatpak/exports/share:/var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/:/var/lib/snapd/desktop ']'
+++ '[' -n /home/jenkins/.local/share/flatpak/exports/share:/var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/:/var/lib/snapd/desktop ']'
+++ XDG_DATA_DIRS=/usr/share/gnome:/home/jenkins/.local/share/flatpak/exports/share:/var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/:/var/lib/snapd/desktop
+++ export XDG_DATA_DIRS
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/im-config_wayland.sh ']'
++ . /etc/profile.d/im-config_wayland.sh
+++ '[' '' '!=' wayland ']'
+++ return
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/larson-group.sh ']'
++ . /etc/profile.d/larson-group.sh
+++ export PATH MANPATH LD_LIBRARY_PATH
+++ export SVNROOT=http://carson.math.uwm.edu/repos
+++ SVNROOT=http://carson.math.uwm.edu/repos
+++ export GIT_EDITOR=vi
+++ GIT_EDITOR=vi
+++ export SVN_EDITOR=vi
+++ SVN_EDITOR=vi
+++ export OMP_STACKSIZE=1048579
+++ OMP_STACKSIZE=1048579
+++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib'
+++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib'
+++ export GFORTRAN_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
+++ GFORTRAN_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
+++ export GFORTRAN_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
+++ GFORTRAN_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
+++ export GFORTRAN_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
+++ GFORTRAN_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
+++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib'
+++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib'
+++ export IFORT_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
+++ IFORT_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
+++ export IFORT_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
+++ IFORT_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
+++ export IFORT_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
+++ IFORT_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
+++ '[' -e /opt/intel/oneapi/setvars.sh ']'
++++ echo /opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin
++++ sed s:/opt/intel/oneapi/intelpython/latest/bin::g
+++ export PATH=/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin
+++ PATH=/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin
+++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib'
+++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/usr/local/NETCDF-C-4.8.0-pgi/lib'
++++ uname -s
++++ uname -m
+++ export NVARCH=Linux_x86_64
+++ NVARCH=Linux_x86_64
+++ export NVCOMPILERS=/opt/nvidia/hpc_sdk
+++ NVCOMPILERS=/opt/nvidia/hpc_sdk
+++ export 'MANPATH=$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/Linux_x86_64/21.3/compilers/man:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man'
+++ MANPATH='$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/Linux_x86_64/21.3/compilers/man:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man'
+++ export CUDADIR=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/cuda/
+++ CUDADIR=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/cuda/
+++ export PGIFORTRAN_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
+++ PGIFORTRAN_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
+++ export PGI_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
+++ PGI_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
+++ export PGI_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
+++ PGI_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
+++ export PATH=/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
+++ PATH=/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
+++ export PATH=/usr/lib/cuda/bin:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
+++ PATH=/usr/lib/cuda/bin:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/NETCDF-Fortran-4.5.3-gfortran/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
+++ export GNU_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
+++ GNU_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
+++ export GNU_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
+++ GNU_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
+++ export GNU_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
+++ GNU_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
+++ export INTEL_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
+++ INTEL_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
+++ export INTEL_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
+++ INTEL_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
+++ export INTEL_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
+++ INTEL_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
+++ export NVHPC_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
+++ NVHPC_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
+++ export NVHPC_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
+++ NVHPC_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
+++ export NVHPC_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
+++ NVHPC_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/lmod.sh ']'
++ . /etc/profile.d/lmod.sh
+++ '[' -z '' ']'
+++ '[' -z '' ']'
+++ export USER=jenkins
+++ USER=jenkins
++++ uname
+++ export LMOD_sys=Linux
+++ LMOD_sys=Linux
++++ uname -m
+++ LMOD_arch=x86_64
+++ '[' xLinux = xAIX ']'
+++ export LMOD_arch
+++ export MODULEPATH_ROOT=/usr/modulefiles
+++ MODULEPATH_ROOT=/usr/modulefiles
+++ export LMOD_SETTARG_CMD=:
+++ LMOD_SETTARG_CMD=:
+++ export LMOD_FULL_SETTARG_SUPPORT=no
+++ LMOD_FULL_SETTARG_SUPPORT=no
+++ export LMOD_COLORIZE=yes
+++ LMOD_COLORIZE=yes
+++ export LMOD_PREPEND_BLOCK=normal
+++ LMOD_PREPEND_BLOCK=normal
++++ sed -n 's/[ #].*$//; /./H; $ { x; s/^\n//; s/\n/:/g; p; }' /etc/lmod/modulespath
+++ MODULEPATH=/etc/lmod/modules:/usr/share/lmod/lmod/modulefiles/
+++ export MODULEPATH
+++ export MODULESHOME=/usr/share/lmod/lmod
+++ MODULESHOME=/usr/share/lmod/lmod
+++ export BASH_ENV=/usr/share/lmod/lmod/init/bash
+++ BASH_ENV=/usr/share/lmod/lmod/init/bash
+++ '[' -z '$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/Linux_x86_64/21.3/compilers/man:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man' ']'
++++ /usr/share/lmod/lmod/libexec/addto MANPATH /usr/share/lmod/lmod/share/man
+++ export 'MANPATH=/usr/share/lmod/lmod/share/man:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/Linux_x86_64/21.3/compilers/man:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man'
+++ MANPATH='/usr/share/lmod/lmod/share/man:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/Linux_x86_64/21.3/compilers/man:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man'
+++ PS_CMD=/bin/ps
+++ '[' '!' -x /bin/ps ']'
+++ EXPR_CMD=/usr/bin/expr
+++ '[' '!' -x /usr/bin/expr ']'
+++ BASENAME_CMD=/usr/bin/basename
+++ '[' '!' -x /usr/bin/basename ']'
++++ /bin/ps -p 3045537 -ocomm=
+++ my_shell=bash
++++ /usr/bin/expr bash : '-*\(.*\)'
+++ my_shell=bash
++++ /usr/bin/basename bash
+++ my_shell=bash
+++ '[' -f /usr/share/lmod/lmod/init/bash ']'
+++ . /usr/share/lmod/lmod/init/bash
++++ [[ ehB != ehxB ]]
++++ echo 'Start of Lmod init/bash script to define the module command'
++++ LMOD_PKG=/usr/share/lmod/lmod
++++ LMOD_DIR=/usr/share/lmod/lmod/libexec
++++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
++++ MODULESHOME=/usr/share/lmod/lmod
++++ export LMOD_PKG
++++ export LMOD_CMD
++++ export LMOD_DIR
++++ export MODULESHOME
++++ LMOD_VERSION=6.6
++++ export LMOD_VERSION
++++ '[' : '!=' : ']'
++++ unalias ml
++++ true
+++++ echo YES
+++++ /usr/bin/tr '[:upper:]' '[:lower:]'
++++ export_module=yes
++++ '[' -n '5.1.16(1)-release' -a yes '!=' no ']'
++++ export -f module
++++ export -f ml
++++ unset export_module
++++ '[' -n '' ']'
++++ '[' 5 -ge 3 ']'
++++ '[' -r /usr/share/lmod/lmod/init/lmod_bash_completions ']'
++++ '[' -n '' ']'
++++ [[ ehB != ehxB ]]
++++ echo 'End of Lmod init/bash script to define the module command'
+++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/pop-im-ibus.sh ']'
++ . /etc/profile.d/pop-im-ibus.sh
+++ export GTK_IM_MODULE=ibus
+++ GTK_IM_MODULE=ibus
+++ export QT_IM_MODULE=ibus
+++ QT_IM_MODULE=ibus
+++ export XMODIFIERS=@im=ibus
+++ XMODIFIERS=@im=ibus
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/vte-2.91.sh ']'
++ . /etc/profile.d/vte-2.91.sh
+++ '[' -n '5.1.16(1)-release' -o -n '' ']'
+++ [[ ehxB == *i* ]]
+++ return 0
++ for i in /etc/profile.d/*.sh
++ '[' -r /etc/profile.d/xdg_dirs_desktop_session.sh ']'
++ . /etc/profile.d/xdg_dirs_desktop_session.sh
+++ DEFAULT_XDG_CONFIG_DIRS=/etc/xdg
+++ DEFAULT_XDG_DATA_DIRS=/usr/local/share/:/usr/share/
+++ '[' -n '' ']'
++ unset i
+ run_scripts/run_cesm_uwm_coarse_res_gpu_no_silhs.sh
----- Case Setup -----
Compset longname is 2000_CAM%DEV_CLM50%SP_CICE%PRES_DOCN%DOM_MOSART_SGLC_SWAV
Compset specification file is /home/jenkins/workspace/cam_ne5_gpu_test/cime_config/config_compsets.xml
Automatically adding SESP to compset
Compset forcing is 1972-2004
ATM component is CAM7 development physics:
LND component is clm5.0:Satellite phenology:
ICE component is Sea ICE (cice) model version 6 :prescribed cice
OCN component is DOCN prescribed ocean mode
ROF component is MOSART: MOdel for Scale Adaptive River Transport
GLC component is Stub glacier (land ice) component
WAV component is Stub wave component
ESP component is Stub external system processing (ESP) component
Pes specification file is /home/jenkins/workspace/cam_ne5_gpu_test/cime_config/config_pes.xml
Machine is nelson
Pes setting: grid is a%ne5np4.pg3_l%ne5np4.pg3_oi%ne5np4.pg3_r%r05_g%null_w%null_z%null_m%gx3v7
Pes setting: compset is 2000_CAM%DEV_CLM50%SP_CICE%PRES_DOCN%DOM_MOSART_SGLC_SWAV_SESP
Pes setting: tasks is {'NTASKS_ATM': -1, 'NTASKS_LND': -1, 'NTASKS_ROF': -1, 'NTASKS_ICE': -1, 'NTASKS_OCN': -1, 'NTASKS_GLC': -1, 'NTASKS_WAV': -1, 'NTASKS_CPL': -1}
Pes setting: threads is {'NTHRDS_ATM': 1, 'NTHRDS_LND': 1, 'NTHRDS_ROF': 1, 'NTHRDS_ICE': 1, 'NTHRDS_OCN': 1, 'NTHRDS_GLC': 1, 'NTHRDS_WAV': 1, 'NTHRDS_CPL': 1}
Pes setting: rootpe is {'ROOTPE_ATM': 0, 'ROOTPE_LND': 0, 'ROOTPE_ROF': 0, 'ROOTPE_ICE': 0, 'ROOTPE_OCN': 0, 'ROOTPE_GLC': 0, 'ROOTPE_WAV': 0, 'ROOTPE_CPL': 0}
Pes setting: pstrid is {}
Pes other settings: {}
Pes comments: none
setting additional fields from config_pes: {}
Compset is: 2000_CAM%DEV_CLM50%SP_CICE%PRES_DOCN%DOM_MOSART_SGLC_SWAV_SESP
Grid is: a%ne5np4.pg3_l%ne5np4.pg3_oi%ne5np4.pg3_r%r05_g%null_w%null_z%null_m%gx3v7
Components in compset are: ['cam', 'clm', 'cice', 'docn', 'mosart', 'sglc', 'swav', 'sesp']
No project info available
No charge_account info available, using value from PROJECT
cesm model version found: cam_4ncar_20240605_2f3c896-8-g88013d8a
Batch_system_type is none
Creating Case directory /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc
ERROR: Unknown Job Queue specified use --force to set
Creating batch scripts
Writing case.run script from input template /home/jenkins/workspace/cam_ne5_gpu_test/ccs_config/machines/template.case.run
Creating file .case.run
Writing case.st_archive script from input template /home/jenkins/workspace/cam_ne5_gpu_test/ccs_config/machines/template.st_archive
Creating file case.st_archive
Creating user_nl_xxx files for components and cpl
Running cam.case_setup.py
If an old case build already exists, might want to run 'case.build --clean' before building
You can now run './preview_run' to get more info on how your case will be run
----- Compile Configuration -----
----- Compile -----
Building case in directory /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc
sharedlib_only is False
model_only is False
Generating component namelists as part of build
2024-06-21 03:28:36 atm
Create namelist for component cam
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime_config/buildnml
...calling cam buildcpp to set build time options
CAM namelist copy: file1 /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc/Buildconf/camconf/atm_in file2 /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/run/atm_in
2024-06-21 03:28:36 lnd
Create namelist for component clm
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/clm//cime_config/buildnml
2024-06-21 03:28:37 ice
Create namelist for component cice
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cice//cime_config/buildnml
RUN: /home/jenkins/workspace/cam_ne5_gpu_test/components/cice/bld/generate_cice_decomp.pl -ccsmroot /home/jenkins/workspace/cam_ne5_gpu_test -res ne5np4.pg3 -nx 1350 -ny 1 -nproc 1 -thrds 1 -output all
FROM: /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc
output: 1350 1 1350 1 1 roundrobin square-ice
2024-06-21 03:28:37 ocn
Create namelist for component docn
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cdeps/docn/cime_config/buildnml
docn_mode is prescribed
2024-06-21 03:28:37 rof
Create namelist for component mosart
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/mosart//cime_config/buildnml
2024-06-21 03:28:37 glc
Create namelist for component sglc
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sglc/cime_config/buildnml
2024-06-21 03:28:37 wav
Create namelist for component swav
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/swav/cime_config/buildnml
2024-06-21 03:28:37 esp
Create namelist for component sesp
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sesp/cime_config/buildnml
2024-06-21 03:28:37 cpl
Create namelist for component drv
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cmeps/cime_config/buildnml
Writing nuopc_runconfig for components ['CPL', 'ATM', 'LND', 'ICE', 'OCN', 'ROF']
Building gptl with output to file /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/gptl.bldlog.240621-032836
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/build_scripts/buildlib.gptl
Building mct with output to file /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/mct.bldlog.240621-032836
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/build_scripts/buildlib.mct
Building pio with output to file /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/pio.bldlog.240621-032836
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/build_scripts/buildlib.pio
Building csm_share with output to file /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/csm_share.bldlog.240621-032836
Calling /home/jenkins/workspace/cam_ne5_gpu_test/share/buildlib.csm_share
Building CDEPS with output to file /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/CDEPS.bldlog.240621-032836
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cdeps/cime_config/buildlib
- Building clm library
Building lnd with output to /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/lnd.bldlog.240621-032836
clm built in 1201.109467 seconds
- Building atm Library
Building atm with output to /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/atm.bldlog.240621-032836
- Building ice Library
Building ice with output to /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/ice.bldlog.240621-032836
- Building ocn Library
Building ocn with output to /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/ocn.bldlog.240621-032836
- Building rof Library
Building rof with output to /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/rof.bldlog.240621-032836
docn built in 0.887216 seconds
mosart built in 173.815262 seconds
cice built in 303.246293 seconds
cam built in 1289.333968 seconds
Building cesm from /home/jenkins/workspace/cam_ne5_gpu_test/components/cmeps/cime_config/buildexe with output to /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/cesm.bldlog.240621-032836
Total build time: 3182.101838 seconds
MODEL BUILD HAS FINISHED SUCCESSFULLY
----- Run configuration -----
----- Run Submission -----
2024-06-21 04:21:41 atm
Create namelist for component cam
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime_config/buildnml
CAM namelist copy: file1 /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc/Buildconf/camconf/atm_in file2 /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/run/atm_in
2024-06-21 04:21:41 lnd
Create namelist for component clm
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/clm//cime_config/buildnml
2024-06-21 04:21:41 ice
Create namelist for component cice
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cice//cime_config/buildnml
RUN: /home/jenkins/workspace/cam_ne5_gpu_test/components/cice/bld/generate_cice_decomp.pl -ccsmroot /home/jenkins/workspace/cam_ne5_gpu_test -res ne5np4.pg3 -nx 1350 -ny 1 -nproc 1 -thrds 1 -output all
FROM: /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc
output: 1350 1 1350 1 1 roundrobin square-ice
2024-06-21 04:21:42 ocn
Create namelist for component docn
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cdeps/docn/cime_config/buildnml
docn_mode is prescribed
2024-06-21 04:21:42 rof
Create namelist for component mosart
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/mosart//cime_config/buildnml
2024-06-21 04:21:42 glc
Create namelist for component sglc
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sglc/cime_config/buildnml
2024-06-21 04:21:42 wav
Create namelist for component swav
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/swav/cime_config/buildnml
2024-06-21 04:21:42 esp
Create namelist for component sesp
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sesp/cime_config/buildnml
2024-06-21 04:21:42 cpl
Create namelist for component drv
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cmeps/cime_config/buildnml
Writing nuopc_runconfig for components ['CPL', 'ATM', 'LND', 'ICE', 'OCN', 'ROF']
Checking that inputdata is available as part of case submission
Loading input file list: 'Buildconf/cice.input_data_list'
Loading input file list: 'Buildconf/cpl.input_data_list'
Loading input file list: 'Buildconf/mosart.input_data_list'
Loading input file list: 'Buildconf/cam.input_data_list'
Loading input file list: 'Buildconf/docn.input_data_list'
Loading input file list: 'Buildconf/ctsm.input_data_list'
Check case OK
submit_jobs case.run
Submit job case.run
Starting job script case.run
Generating namelists for /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc
2024-06-21 04:21:42 atm
Create namelist for component cam
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime_config/buildnml
CAM namelist copy: file1 /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc/Buildconf/camconf/atm_in file2 /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/run/atm_in
2024-06-21 04:21:42 lnd
Create namelist for component clm
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/clm//cime_config/buildnml
2024-06-21 04:21:42 ice
Create namelist for component cice
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cice//cime_config/buildnml
RUN: /home/jenkins/workspace/cam_ne5_gpu_test/components/cice/bld/generate_cice_decomp.pl -ccsmroot /home/jenkins/workspace/cam_ne5_gpu_test -res ne5np4.pg3 -nx 1350 -ny 1 -nproc 1 -thrds 1 -output all
FROM: /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc
output: 1350 1 1350 1 1 roundrobin square-ice
2024-06-21 04:21:43 ocn
Create namelist for component docn
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cdeps/docn/cime_config/buildnml
docn_mode is prescribed
2024-06-21 04:21:43 rof
Create namelist for component mosart
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/mosart//cime_config/buildnml
2024-06-21 04:21:43 glc
Create namelist for component sglc
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sglc/cime_config/buildnml
2024-06-21 04:21:43 wav
Create namelist for component swav
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/swav/cime_config/buildnml
2024-06-21 04:21:43 esp
Create namelist for component sesp
Calling /home/jenkins/workspace/cam_ne5_gpu_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sesp/cime_config/buildnml
2024-06-21 04:21:43 cpl
Create namelist for component drv
Calling /home/jenkins/workspace/cam_ne5_gpu_test/components/cmeps/cime_config/buildnml
Writing nuopc_runconfig for components ['CPL', 'ATM', 'LND', 'ICE', 'OCN', 'ROF']
-------------------------------------------------------------------------
- Prestage required restarts into /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/run
- Case input data directory (DIN_LOC_ROOT) is /home/pub/cam_inputdata
- Checking for required input datasets in DIN_LOC_ROOT
-------------------------------------------------------------------------
run command is /opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5//bin/mpirun -np 1 /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/cesm.exe >> cesm.log.$LID 2>&1
No timing file found in run directory
check for resubmit
dout_s False
mach nelson
resubmit_num 0
Submitted job case.run with id None
Success!
![[Jenkins]](/jenkins/static/57c8a776/images/svgs/logo.svg){kind=logo}
