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Started by user Peter Roels Obtained jenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfile from git https://github.com/larson-group/cam.git [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor Running on Jenkins in /home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Cloning the remote Git repository Cloning repository https://github.com/larson-group/cam.git > git init /home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/cam.git > git --version # timeout=10 > git --version # 'git version 2.30.2' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10 Checking out Revision 5f28804ea67da26c76cb5a0fae485ba4d40fe90d (refs/remotes/origin/clubb_silhs_devel) > git config core.sparsecheckout # timeout=10 > git checkout -f 5f28804ea67da26c76cb5a0fae485ba4d40fe90d # timeout=10 Commit message: "Changing NETCDF path in jenkins test command." > git rev-list --no-walk 199cf20cd0713ad0e5ad98060b48355d23d2a9ab # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Check out externals) [Pipeline] sh + python manage_externals/checkout_externals -e Externals.cfg Processing externals description file : Externals.cfg Processing externals description file : Externals_CAM.cfg Checking status of externals: cice, cice6, cmeps, cdeps, cpl7, share, mct, parallelio, cime, cism, clm, fms, mosart, rtm, cam, chem_proc, carma, cosp2, pumas, atmos_phys, atmos_cubed_sphere, mpas, Checking out externals: cice, cmeps, cdeps, cpl7, share, mct, parallelio, cime, cism, clm, mosart, rtm, cam, Processing externals description file : Externals_CDEPS.cfg Checking out externals: fox, genf90, Processing externals description file : Externals_CISM.cfg Checking out externals: source_cism, Processing externals description file : Externals_CLM.cfg Checking out externals: fates, ptclm, Processing externals description file : Externals_CAM.cfg Checking out externals: chem_proc, carma, cosp2, pumas, atmos_phys, atmos_cubed_sphere, mpas, [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Copy Config Files) [Pipeline] sh + cp -f cime_config_cesm_machines_files/config_compilers.xml cime/config/cesm/machines/config_compilers.xml + cp -f cime_config_cesm_machines_files/config_machines.xml cime/config/cesm/machines/config_machines.xml [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Make cprnc) [Pipeline] dir Running in /home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test/cime/tools/cprnc [Pipeline] { [Pipeline] sh + bash -c 'export LIB_NETCDF=/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib; export INC_NETCDF=/usr/local/NETCDF-Fortran-4.5.3-gfortran/include; ../configure --macros-format=Makefile --mpilib=mpi-serial; source ./.env_mach_specific.sh; make' Could not find machine match for 'nelson.localdomain' or 'nelson' Traceback (most recent call last): File "/home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test/cime/tools/cprnc/../configure", line 164, in <module> _main() File "/home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test/cime/tools/cprnc/../configure", line 158, in _main opts = parse_command_line(sys.argv) File "/home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test/cime/tools/cprnc/../configure", line 86, in parse_command_line machobj = Machines(machine=args.machine) File "/home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test/cime/tools/../scripts/lib/CIME/XML/machines.py", line 74, in __init__ GenericXML.read(self, local_infile, schema) File "/home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test/cime/tools/../scripts/lib/CIME/XML/generic_xml.py", line 101, in read with file_open(infile) as fd: File "/home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test/cime/tools/../scripts/lib/CIME/XML/generic_xml.py", line 100, in <lambda> file_open = (lambda x: open(x, 'r', encoding='utf-8')) if six.PY3 else (lambda x: open(x, 'r')) FileNotFoundError: [Errno 2] No such file or directory: '/home/jenkins/workspace/cam_global_ERP_Ln9_gfortran_test/cime/config/e3sm/machines/config_machines.xml' bash: line 1: ./.env_mach_specific.sh: No such file or directory Makefile:29: Macros.make: No such file or directory make: *** No rule to make target 'Macros.make'. Stop. [Pipeline] } [Pipeline] // dir [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run CAM) Stage "Run CAM" skipped due to earlier failure(s) [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] sh + chmod -R 755 /home/jenkins/cam_output [Pipeline] sh + gzip -d '/home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.*/bld/atm.bldlog.*.gz' gzip: /home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.*/bld/atm.bldlog.*.gz: No such file or directory [Pipeline] echo Not all logs were made. [Pipeline] } [Pipeline] // script [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 2 Finished: FAILURE