Started by an SCM change Obtained jenkins_tests/cam_BFB_coarse_res_r8029_flags_gfortran_test/Jenkinsfile from git https://github.com/larson-group/cam.git [Pipeline] Start of Pipeline [Pipeline] node Running on nelson in /home/jenkins/workspace/cam_BFB_coarse_res_r8029_flags_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/cam.git > git init /home/jenkins/workspace/cam_BFB_coarse_res_r8029_flags_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/cam.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision 46ff475a97c618b1cb7329f826f0a68b0d5c937b (refs/remotes/origin/clubb_silhs_devel) Commit message: "Autoupdated CLUBB_core Commit f5fb36fc103a46c7cd19ebbe151163da8ee91c42 Author: Gunther Huebler Date: Mon Mar 23 15:25:40 2026 -0500 Little Fix (#1287) * Making matrix solve checks also trigger if l_implemented is true so that they always are done in CAM, regardless of debug level" > git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 46ff475a97c618b1cb7329f826f0a68b0d5c937b # timeout=10 > git rev-list --no-walk bdd345cc0a92472c9e2c39673bae4b621266c13e # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Update sys_admin Repo) [Pipeline] sh + git -C /home/pub/jenkins_BFB_test_configs/sys_admin pull From https://github.com/larson-group/sys_admin 2294a90..57fa685 master -> origin/master ed786d6..c3c27a1 update-python-scripts -> origin/update-python-scripts Updating 2294a90..57fa685 Fast-forward .../03_23_2026/README | 6 +++++ .../cam_BFB_coarse_res_gfortran_test_config | 19 +++++++++++++++ ...BFB_coarse_res_r8029_flags_gfortran_test_config | 19 +++++++++++++++ .../clubb_BFB_e3sm_flags_gfortran_test_config | 21 ++++++++++++++++ .../03_23_2026/clubb_BFB_gfortran_test_config | 20 ++++++++++++++++ .../clubb_BFB_multi_col_gpu_nvhpc_test_config | 28 ++++++++++++++++++++++ .../clubb_BFB_r8029_flags_gfortran_test_config | 23 ++++++++++++++++++ .../bin_diff_threading_no_silhs_cam_config | 0 .../07_08_2023}/bit_diff_cam_config | 0 .../07_08_2023}/bit_diff_cam_r8029_config | 0 .../07_08_2023}/bit_diff_clubb_bc_r8092_config | 0 .../07_08_2023}/bit_diff_clubb_config | 0 .../07_08_2023}/bit_diff_clubb_e3sm_flags_config | 0 .../07_08_2023}/bit_diff_e3sm_ne4_config | 0 .../jenkins_BFB_test_configs_snapshots/README.md | 6 +++++ 15 files changed, 142 insertions(+) create mode 100644 python_nightly_test_suite/jenkins_BFB_test_configs_snapshots/03_23_2026/README create mode 100755 python_nightly_test_suite/jenkins_BFB_test_configs_snapshots/03_23_2026/cam_BFB_coarse_res_gfortran_test_config create mode 100755 python_nightly_test_suite/jenkins_BFB_test_configs_snapshots/03_23_2026/cam_BFB_coarse_res_r8029_flags_gfortran_test_config create mode 100755 python_nightly_test_suite/jenkins_BFB_test_configs_snapshots/03_23_2026/clubb_BFB_e3sm_flags_gfortran_test_config create mode 100755 python_nightly_test_suite/jenkins_BFB_test_configs_snapshots/03_23_2026/clubb_BFB_gfortran_test_config create mode 100755 python_nightly_test_suite/jenkins_BFB_test_configs_snapshots/03_23_2026/clubb_BFB_multi_col_gpu_nvhpc_test_config create mode 100755 python_nightly_test_suite/jenkins_BFB_test_configs_snapshots/03_23_2026/clubb_BFB_r8029_flags_gfortran_test_config rename python_nightly_test_suite/{config_files => jenkins_BFB_test_configs_snapshots/07_08_2023}/bin_diff_threading_no_silhs_cam_config (100%) rename python_nightly_test_suite/{config_files => jenkins_BFB_test_configs_snapshots/07_08_2023}/bit_diff_cam_config (100%) rename python_nightly_test_suite/{config_files => jenkins_BFB_test_configs_snapshots/07_08_2023}/bit_diff_cam_r8029_config (100%) rename python_nightly_test_suite/{config_files => jenkins_BFB_test_configs_snapshots/07_08_2023}/bit_diff_clubb_bc_r8092_config (100%) rename python_nightly_test_suite/{config_files => jenkins_BFB_test_configs_snapshots/07_08_2023}/bit_diff_clubb_config (100%) rename python_nightly_test_suite/{config_files => jenkins_BFB_test_configs_snapshots/07_08_2023}/bit_diff_clubb_e3sm_flags_config (100%) rename python_nightly_test_suite/{config_files => jenkins_BFB_test_configs_snapshots/07_08_2023}/bit_diff_e3sm_ne4_config (100%) create mode 100644 python_nightly_test_suite/jenkins_BFB_test_configs_snapshots/README.md [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + rm -rf /home/jenkins/cam_output/scratch/UWM_debug_r8029_flags_f10_f10_mg37 + ulimit -s 8388608 + python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/cam_BFB_coarse_res_r8029_flags_gfortran_test_config ERROR: Unknown Job Queue specified use --force to set submit_jobs case.run Submit job case.run No timing file found in run directory check for resubmit dout_s False mach larson-group resubmit_num 0 ERROR: Unknown Job Queue specified use --force to set submit_jobs case.run Submit job case.run No timing file found in run directory check for resubmit dout_s False mach larson-group resubmit_num 0 -------- Variable Diff Summary -------- File 1: 46ff475a97c618b1cb7329f826f0a68b0d5c937b File 2: bdd345cc0a92472c9e2c39673bae4b621266c13e Variables discovered (union): 1594 Variables present in both files: 1594 Variables only in file 1: 0 Variables only in file 2: 0 Variables with differences (all dimensions): 1 Variables identical (all dimensions): 1593 Variables all-zero in file 1 (actual data): 140 Variables all-zero in file 2 (actual data): 140 Variables all-zero in both files (actual data): 140 3D variables tested (PASS/FAIL basis): 575 3D variables with differences: 0 3D variables identical: 575 3D variables all-zero in both files (actual data): 105 Variables skipped for PASS/FAIL (not 3D in either file): 1019 Variables with differences: - time_written | reason=data mismatch | file1: ndim=2, dims=('time', 'chars') | file2: ndim=2, dims=('time', 'chars') PASS: No differences found in 3D variables. =============================== Configuring Test =============================== Working directory set to: /home/jenkins/workspace/cam_BFB_coarse_res_r8029_flags_gfortran_test Checking specified repo: /home/jenkins/workspace/cam_BFB_coarse_res_r8029_flags_gfortran_test Using /home/jenkins/workspace/cam_BFB_coarse_res_r8029_flags_gfortran_test with origin https://github.com/larson-group/cam.git Output Save Mode: none Using branch: clubb_silhs_devel Making list from 'UnresolvedCommits': CheckRange = False: only comparing baseline to final commit. Run Output Path: /home/jenkins/cam_output/scratch/UWM_debug_r8029_flags_f10_f10_mg37/run/UWM_debug_r8029_flags_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc Run commands: ['rm -rf /home/jenkins/cam_output/scratch/UWM_debug_r8029_flags_f10_f10_mg37', '\nrun_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/UWM_debug_r8029_flags_f10_f10_mg37 --reuse_build .', '\nrun_scripts/run_cesm_uwm_coarse_res_r8029_flags.sh'] Diffing command: python3 run_scripts/netcdf_3D_vars_diff.py =============================== Running Test =============================== Parsing message from commit: 46ff475a97c618b1cb7329f826f0a68b0d5c937b Checking Commit: 46ff475a97c618b1cb7329f826f0a68b0d5c937b Running: final commit to check, not labelled BIT_CHANGING Checking out 46ff475a97c618b1cb7329f826f0a68b0d5c937b Running: 'rm -rf /home/jenkins/cam_output/scratch/UWM_debug_r8029_flags_f10_f10_mg37' Running: 'run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/UWM_debug_r8029_flags_f10_f10_mg37 --reuse_build .' Running: 'run_scripts/run_cesm_uwm_coarse_res_r8029_flags.sh' Checking out bdd345cc0a92472c9e2c39673bae4b621266c13e Running: 'rm -rf /home/jenkins/cam_output/scratch/UWM_debug_r8029_flags_f10_f10_mg37' Running: 'run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/UWM_debug_r8029_flags_f10_f10_mg37 --reuse_build .' Running: 'run_scripts/run_cesm_uwm_coarse_res_r8029_flags.sh' Diffing: 'python3 run_scripts/netcdf_3D_vars_diff.py 46ff475a97c618b1cb7329f826f0a68b0d5c937b bdd345cc0a92472c9e2c39673bae4b621266c13e' =============================== Test Results =============================== Commit Range Checked = bdd345cc0a92472c9e2c39673bae4b621266c13e...46ff475a97c618b1cb7329f826f0a68b0d5c937b -- CheckRange was set to False, no intermediate commits checked No new Unresolved commits found. No fake BIT_CHANGING commits found. No remaining Unresolved Commits. =============================== Updating Config File =============================== Saving into UnresolvedCommits: Saving into BaselineCommit: 46ff475a97c618b1cb7329f826f0a68b0d5c937b =============================== Cleanup =============================== Removing all generated output REMOVING: bdd345cc0a92472c9e2c39673bae4b621266c13e REMOVING: 46ff475a97c618b1cb7329f826f0a68b0d5c937b ================== Unresolved Commit Status ================== No remaining Unresolved Commits. Exiting with code: 0 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] sh + chmod -R 755 /home/jenkins/cam_output [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS