+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37
+ ulimit -s 8388608
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/cam_BFB_coarse_res_gfortran_test_config
repo/run_scripts/run_cesm_uwm_coarse_res.sh: line 31: cd: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/repo/cime/scripts: No such file or directory
repo/run_scripts/run_cesm_uwm_coarse_res.sh: line 32: ./create_newcase: No such file or directory
Error creating new case
m_uwm_coarse_res.sh: line 31: cd: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/repo/cime/scripts: No such file or directory
repo/run_scripts/run_cesm_uwm_coarse_res.sh: line 32: ./create_newcase: No such file or directory
Error creating new case
m_uwm_coarse_res.sh: line 31: cd: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/repo/cime/scripts: No such file or directory
repo/run_scripts/run_cesm_uwm_coarse_res.sh: line 32: ./create_newcase: No such file or directory
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test
Trying to clone repo...
Cloned repo location: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/repo
Output Save Mode: none
Using branch: clubb_silhs_devel
Making list from 'UnresolvedCommits':
- 12b863486054c9a0147fa01a8e29763715f5e164
- fd0ac9c976c9d74ec57367f8ff82d0598da11733
Run Output Path: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc
Run commands: ['rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37', '\nrepo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo', '\nrepo/run_scripts/run_cesm_uwm_coarse_res.sh']
Diffing command: python3 repo/run_scripts/netcdf_3D_vars_diff.py
=============================== Running Test ===============================
Parsing message from commit: 12b863486054c9a0147fa01a8e29763715f5e164
Parsing message from commit: fd0ac9c976c9d74ec57367f8ff82d0598da11733
Checking Commit: 12b863486054c9a0147fa01a8e29763715f5e164
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: fd0ac9c976c9d74ec57367f8ff82d0598da11733
Running: final commit to check, not labelled BIT_CHANGING
Checking out fd0ac9c976c9d74ec57367f8ff82d0598da11733
Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
================== WARNING ==================
Commit: fd0ac9c976c9d74ec57367f8ff82d0598da11733
There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc
The run will continue, and this commit will be
considered unresolved.
===========================================
Checking out e3ee84a0d729747f28492dee973502674281cb0c
Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
================== WARNING ==================
Commit: e3ee84a0d729747f28492dee973502674281cb0c
There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc
The run will continue, and this commit will be
considered unresolved.
===========================================
ISSUE WITH COMMIT DETECTED: fd0ac9c976c9d74ec57367f8ff82d0598da11733 differs from e3ee84a0d729747f28492dee973502674281cb0c
Finding all BIT_CHANGING commits in range: e3ee84a0d729747f28492dee973502674281cb0c...fd0ac9c976c9d74ec57367f8ff82d0598da11733
Checking out 12b863486054c9a0147fa01a8e29763715f5e164
Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
================== WARNING ==================
Commit: 12b863486054c9a0147fa01a8e29763715f5e164
There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc
The run will continue, and this commit will be
considered unresolved.
===========================================
Commit e3ee84a0d729747f28492dee973502674281cb0c already failed. Will not run again
Commit fd0ac9c976c9d74ec57367f8ff82d0598da11733 already failed. Will not run again
Commit 12b863486054c9a0147fa01a8e29763715f5e164 already failed. Will not run again
Found:
12b863486054c9a0147fa01a8e29763715f5e164
fd0ac9c976c9d74ec57367f8ff82d0598da11733
=============================== Test Results ===============================
Commit Range Checked = e3ee84a0d729747f28492dee973502674281cb0c...fd0ac9c976c9d74ec57367f8ff82d0598da11733
New Unresolved Commits:
12b863486054c9a0147fa01a8e29763715f5e164
fd0ac9c976c9d74ec57367f8ff82d0598da11733
No fake BIT_CHANGING commits found.
Remaining Unresolved Commits (oldest commit is listed first):
12b863486054c9a0147fa01a8e29763715f5e164
fd0ac9c976c9d74ec57367f8ff82d0598da11733
=============================== Updating Config File ===============================
Saving into UnresolvedCommits: 12b863486054c9a0147fa01a8e29763715f5e164
fd0ac9c976c9d74ec57367f8ff82d0598da11733
Ignoring fd0ac9c976c9d74ec57367f8ff82d0598da11733 since it failed to produce output.
Ignoring 12b863486054c9a0147fa01a8e29763715f5e164 since it failed to produce output.
=============================== Cleanup ===============================
Removed repo.
Removing all generated output
================== Unresolved Commit Status ==================
Remaining Unresolved Commits (oldest commit is listed first):
12b863486054c9a0147fa01a8e29763715f5e164
fd0ac9c976c9d74ec57367f8ff82d0598da11733
================== FAILED Commits ==================
These are the commits which entirely failed to produce output:
fd0ac9c976c9d74ec57367f8ff82d0598da11733
e3ee84a0d729747f28492dee973502674281cb0c
12b863486054c9a0147fa01a8e29763715f5e164
Exiting with code: 1