+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37
+ ulimit -s 8388608
+ python3 /home/jenkins/cam_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/cam_bit_diff_test_workspace/bit_diff_cam_config
ERROR: Unknown Job Queue specified use --force to set
Error: There is no specific subroutine for the generic 'advance_clubb_core_api' at (1)
Error: Type mismatch in argument 'nzmax' at (1); passed REAL(8) to INTEGER(4)
Error: Type mismatch in argument 'params' at (1); passed LOGICAL(4) to REAL(8)
Error: Type mismatch in argument 'l_input_fields' at (1); passed TYPE(clubb_config_flags_type) to LOGICAL(4)
Error: Type mismatch in argument 'clubb_config_flags' at (1); passed INTEGER(4) to TYPE(clubb_config_flags_type)
ERROR: BUILD FAIL: cam.buildlib failed, cat /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/bld/atm.bldlog.241005-031359
Error building CAM
Queue specified use --force to set
submit_jobs case.run
Submit job case.run
No timing file found in run directory
check for resubmit
dout_s False
mach larson-group
resubmit_num 0
ERROR: Unknown Job Queue specified use --force to set
Error: There is no specific subroutine for the generic 'generate_silhs_sample_api' at (1)
Error: There is no specific subroutine for the generic 'clip_transform_silhs_output_api' at (1)
ERROR: BUILD FAIL: cam.buildlib failed, cat /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/bld/atm.bldlog.241005-033145
Error building CAM
Queue specified use --force to set
submit_jobs case.run
Submit job case.run
No timing file found in run directory
check for resubmit
dout_s False
mach larson-group
resubmit_num 0
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/cam_bit_diff_test_workspace
Trying to clone repo...
Cloned repo location: /home/jenkins/cam_bit_diff_test_workspace/repo
Output Save Mode: none
Using branch: clubb_silhs_devel
Making list from 'UnresolvedCommits':
Run Output Path: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc
Run commands: ['rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37', '\nrepo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo', '\nrepo/run_scripts/run_cesm_uwm_coarse_res.sh']
Diffing command: python3 repo/run_scripts/netcdf_3D_vars_diff.py
=============================== Running Test ===============================
Parsing message from commit: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
Parsing message from commit: 37f9c23a4355a8135ddb74229cd970da02959130
Found: BIT_CHANGING
Parsing message from commit: c26d4422b4325a4b592a93dc92e93bb70adf84b0
Checking Commit: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: 37f9c23a4355a8135ddb74229cd970da02959130
Checking out 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
================== WARNING ==================
Commit: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc
The run will continue, and this commit will be
considered unresolved.
===========================================
Checking out dabbf904b1ae020619366b1720c2ae531de0370c
Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
ISSUE WITH COMMIT DETECTED: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05 differs from dabbf904b1ae020619366b1720c2ae531de0370c
Checking out 37f9c23a4355a8135ddb74229cd970da02959130
Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
================== WARNING ==================
Commit: 37f9c23a4355a8135ddb74229cd970da02959130
There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc
The run will continue, and this commit will be
considered unresolved.
===========================================
Commit 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05 already failed. Will not run again
Commit '37f9c23a4355a8135ddb74229cd970da02959130' is BIT_CHANGING and properly labelled as such.
Checking Commit: c26d4422b4325a4b592a93dc92e93bb70adf84b0
Running: final commit to check, not labelled BIT_CHANGING
Checking out c26d4422b4325a4b592a93dc92e93bb70adf84b0
Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
Commit 37f9c23a4355a8135ddb74229cd970da02959130 already failed. Will not run again
ISSUE WITH COMMIT DETECTED: c26d4422b4325a4b592a93dc92e93bb70adf84b0 differs from 37f9c23a4355a8135ddb74229cd970da02959130
Finding all BIT_CHANGING commits in range: dabbf904b1ae020619366b1720c2ae531de0370c...07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
Commit 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05 already failed. Will not run again
Output from dabbf904b1ae020619366b1720c2ae531de0370c already saved
Found:
07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
Finding all BIT_CHANGING commits in range: 37f9c23a4355a8135ddb74229cd970da02959130...c26d4422b4325a4b592a93dc92e93bb70adf84b0
Output from c26d4422b4325a4b592a93dc92e93bb70adf84b0 already saved
Commit 37f9c23a4355a8135ddb74229cd970da02959130 already failed. Will not run again
Found:
c26d4422b4325a4b592a93dc92e93bb70adf84b0
=============================== Test Results ===============================
Commit Range Checked = dabbf904b1ae020619366b1720c2ae531de0370c...c26d4422b4325a4b592a93dc92e93bb70adf84b0
New Unresolved Commits:
07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
c26d4422b4325a4b592a93dc92e93bb70adf84b0
No fake BIT_CHANGING commits found.
Remaining Unresolved Commits (oldest commit is listed first):
07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
c26d4422b4325a4b592a93dc92e93bb70adf84b0
=============================== Updating Config File ===============================
Saving into UnresolvedCommits: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
c26d4422b4325a4b592a93dc92e93bb70adf84b0
Saving into BaselineCommit: c26d4422b4325a4b592a93dc92e93bb70adf84b0
=============================== Cleanup ===============================
Removed repo.
Removing all generated output
REMOVING: dabbf904b1ae020619366b1720c2ae531de0370c
REMOVING: c26d4422b4325a4b592a93dc92e93bb70adf84b0
================== Unresolved Commit Status ==================
Remaining Unresolved Commits (oldest commit is listed first):
07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
c26d4422b4325a4b592a93dc92e93bb70adf84b0
================== FAILED Commits ==================
These are the commits which entirely failed to produce output:
07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
37f9c23a4355a8135ddb74229cd970da02959130
Exiting with code: 1
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