Console Output

+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load intel netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python compile.py
-- The Fortran compiler identification is IntelLLVM 2023.2.0
-- The C compiler identification is IntelLLVM 2023.2.0
-- The CXX compiler identification is IntelLLVM 2023.2.0
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/intel-oneapi-compilers-2023.2.0-od6qbkw4h7zydnyvjahatxrprimcyseq/compiler/2023.2.0/linux/bin/ifx - skipped
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/intel-oneapi-compilers-2023.2.0-od6qbkw4h7zydnyvjahatxrprimcyseq/compiler/2023.2.0/linux/bin/icx - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/intel-oneapi-compilers-2023.2.0-od6qbkw4h7zydnyvjahatxrprimcyseq/compiler/2023.2.0/linux/bin/icpx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Compiling with double precision
-- Found PkgConfig: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/pkgconf-2.2.0-m7jt4djj7ycrz7g6yadslcm2qmulsagd/bin/pkg-config (found version "2.2.0") 
-- Checking for module 'netcdf-fortran'
--   Found netcdf-fortran, version 4.5.3
-- netcdf-fortran found via pkg-config
-- Include dirs: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g/include;/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-c-4.9.2-mrmfc7travjahj5qigj26qtr5jqutebk/include
-- Libraries:    netcdff
-- Derived NetCDFFortran_ROOT = /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g
-- Configuring done
-- Generating done
-- Build files have been written to: /home/jenkins/workspace/branch_clubb_test/build/ifx
Scanning dependencies of target clubb_lapack_shared
[  1%] Building Fortran object src/Lapack/Lapack_shared/CMakeFiles/clubb_lapack_shared.dir/lsame.f.o
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[  1%] Built target clubb_lapack_shared
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[ 34%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsytd2.f.o
[ 34%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsytrd.f.o
[ 34%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtbsv.f.o
[ 35%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrmm.f.o
[ 35%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrmv.f.o
[ 35%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrsm.f.o
[ 35%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/idamax.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/ieeeck.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iladlc.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iladlr.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/ilaenv.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iparmq.f.o
/home/jenkins/workspace/branch_clubb_test/src/Lapack/Lapack_double/iparmq.f(223): remark #7712: This variable has not been used.   [OPTS]
      INTEGER FUNCTION IPARMQ( ISPEC, NAME, OPTS, N, ILO, IHI, LWORK )
--------------------------------------------^
/home/jenkins/workspace/branch_clubb_test/src/Lapack/Lapack_double/iparmq.f(223): remark #7712: This variable has not been used.   [N]
      INTEGER FUNCTION IPARMQ( ISPEC, NAME, OPTS, N, ILO, IHI, LWORK )
--------------------------------------------------^
/home/jenkins/workspace/branch_clubb_test/src/Lapack/Lapack_double/iparmq.f(223): remark #7712: This variable has not been used.   [LWORK]
      INTEGER FUNCTION IPARMQ( ISPEC, NAME, OPTS, N, ILO, IHI, LWORK )
---------------------------------------------------------------^
[ 36%] Built target clubb_lapack_double
[ 36%] Linking Fortran static library liblapack_lib.a
[ 36%] Built target lapack_lib
Scanning dependencies of target text_writer_lib
[ 36%] Building Fortran object src/CMakeFiles/text_writer_lib.dir/text_writer.F90.o
/home/jenkins/workspace/branch_clubb_test/src/text_writer.F90(68): error #7002: Error in opening the compiled module file.  Check INCLUDE paths.   [CLUBB_PRECISION]
    use clubb_precision, only: &
--------^
/home/jenkins/workspace/branch_clubb_test/src/text_writer.F90(78): error #6683: A kind type parameter must be a compile-time constant.   [CORE_RKND]
    real( kind = core_rknd ), intent(in) :: value              ! The value to write/display
-----------------^
/home/jenkins/workspace/branch_clubb_test/src/text_writer.F90(110): error #7002: Error in opening the compiled module file.  Check INCLUDE paths.   [CLUBB_PRECISION]
    use clubb_precision, only: &
--------^
/home/jenkins/workspace/branch_clubb_test/src/text_writer.F90(120): error #6683: A kind type parameter must be a compile-time constant.   [CORE_RKND]
    real( kind = core_rknd ), dimension(:), intent(in) :: value ! The value to write/display
-----------------^
/home/jenkins/workspace/branch_clubb_test/src/text_writer.F90(69): error #6580: Name in only-list does not exist or is not accessible.   [CORE_RKND]
      core_rknd ! Variable(s)
------^
/home/jenkins/workspace/branch_clubb_test/src/text_writer.F90(111): error #6580: Name in only-list does not exist or is not accessible.   [CORE_RKND]
      core_rknd ! Variable(s)
------^
compilation aborted for /home/jenkins/workspace/branch_clubb_test/src/text_writer.F90 (code 1)
gmake[2]: *** [src/CMakeFiles/text_writer_lib.dir/build.make:75: src/CMakeFiles/text_writer_lib.dir/text_writer.F90.o] Error 1
gmake[1]: *** [CMakeFiles/Makefile2:1206: src/CMakeFiles/text_writer_lib.dir/all] Error 2
gmake: *** [Makefile:146: all] Error 2
Setting CLUBB installation dir: /home/jenkins/workspace/branch_clubb_test/install/ifx
Using inferred toolchain file: /home/jenkins/workspace/branch_clubb_test/cmake/toolchains/linux_x86_64_ifx.cmake
about to cmnake /home/jenkins/workspace/branch_clubb_test/build/ifx
Running CMake configure...
Traceback (most recent call last):
  File "/home/jenkins/workspace/branch_clubb_test/compile.py", line 285, in <module>
    sys.exit(main())
  File "/home/jenkins/workspace/branch_clubb_test/compile.py", line 244, in main
    os.symlink(inst_dir, link_path)
FileNotFoundError: [Errno 2] No such file or directory: '/home/jenkins/workspace/branch_clubb_test/install/ifx' -> '/home/jenkins/workspace/branch_clubb_test/install/latest'