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</comment><date>2021-04-01 08:35:42 -0500</date><id>0c3cc9b14d0c7b87494e75d4776fcbde781fa576</id><msg>Some changes to the code that will help run the CGILS_S12 case.  There are two special new files included for that case only, nudging.cgils and surface.cgils, which can be copied into place when needed, but the code should give the same results for all the normal cases.</msg><path><editType>edit</editType><file>SRC/grid.F90</file></path><path><editType>edit</editType><file>SRC/vars.F90</file></path><path><editType>add</editType><file>SRC/nudging.cgils</file></path><path><editType>edit</editType><file>SRC/params.F90</file></path><path><editType>edit</editType><file>SRC/main.F90</file></path><path><editType>edit</editType><file>SRC/setparm.F90</file></path><path><editType>add</editType><file>SRC/surface.cgils</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100_fixnudge.options_namelists</affectedPath><affectedPath>CGILS_S12/grd</affectedPath><affectedPath>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100_ndgfix_4x_adv.options_namelists</affectedPath><affectedPath>CGILS_S12/resub.advsel</affectedPath><affectedPath>CGILS_S12/prm.advsel</affectedPath><affectedPath>CGILS_S12/resub.ndgfix</affectedPath><affectedPath>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100_ndgfix_advsel.options_namelists</affectedPath><affectedPath>CGILS_S12/prm.4x_adv</affectedPath><affectedPath>CGILS_S12/resub.0</affectedPath><affectedPath>CGILS_S12/prm.adv_diurn</affectedPath><affectedPath>CGILS_S12/ctl_s12_Dec2010.nc</affectedPath><affectedPath>CGILS_S12/resub.4x_adv</affectedPath><affectedPath>CGILS_S12/lst</affectedPath><affectedPath>CGILS_S12/resub.adv_diurn</affectedPath><affectedPath>CGILS_S12/prm.ndgfix</affectedPath><affectedPath>CGILS_S12/prm</affectedPath><affectedPath>CGILS_S12/ctl_s12_Dec2010_ml.nc</affectedPath><affectedPath>CGILS_S12/prm.0</affectedPath><affectedPath>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100_diurn_advsel.options_namelists</affectedPath><affectedPath>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100.options_namelists</affectedPath><affectedPath>CGILS_S12/README</affectedPath><commitId>f01a9fbb1281b66e8994a90046852091815c4b98</commitId><timestamp>1617284142000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Adding CGILS_S12 folder with setup files for that case, courtesy of Peter Blossey.  These files probably need some modification before use, since some parameters are not present in our model.
</comment><date>2021-04-01 08:35:42 -0500</date><id>f01a9fbb1281b66e8994a90046852091815c4b98</id><msg>Adding CGILS_S12 folder with setup files for that case, courtesy of Peter Blossey.  These files probably need some modification before use, since some parameters are not present in our model.</msg><path><editType>add</editType><file>CGILS_S12/ctl_s12_Dec2010_ml.nc</file></path><path><editType>add</editType><file>CGILS_S12/prm.0</file></path><path><editType>add</editType><file>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100_fixnudge.options_namelists</file></path><path><editType>add</editType><file>CGILS_S12/prm</file></path><path><editType>add</editType><file>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100_ndgfix_advsel.options_namelists</file></path><path><editType>add</editType><file>CGILS_S12/resub.adv_diurn</file></path><path><editType>add</editType><file>CGILS_S12/README</file></path><path><editType>add</editType><file>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100_ndgfix_4x_adv.options_namelists</file></path><path><editType>add</editType><file>CGILS_S12/resub.0</file></path><path><editType>add</editType><file>CGILS_S12/prm.ndgfix</file></path><path><editType>add</editType><file>CGILS_S12/resub.4x_adv</file></path><path><editType>add</editType><file>CGILS_S12/resub.ndgfix</file></path><path><editType>add</editType><file>CGILS_S12/lst</file></path><path><editType>add</editType><file>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100.options_namelists</file></path><path><editType>add</editType><file>CGILS_S12/prm.adv_diurn</file></path><path><editType>add</editType><file>CGILS_S12/resub.advsel</file></path><path><editType>add</editType><file>CGILS_S12/prm.advsel</file></path><path><editType>add</editType><file>CGILS_S12/grd</file></path><path><editType>add</editType><file>CGILS_S12/ctl_s12_96x96x192_25m_DRZ_N100_diurn_advsel.options_namelists</file></path><path><editType>add</editType><file>CGILS_S12/prm.4x_adv</file></path><path><editType>add</editType><file>CGILS_S12/ctl_s12_Dec2010.nc</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>SRC/MICRO_DRIZZLE/microphysics.F90</affectedPath><affectedPath>SRC/surface.cgils</affectedPath><affectedPath>SRC/nudging.cgils</affectedPath><affectedPath>SRC/setparm.F90</affectedPath><affectedPath>SRC/grid.F90</affectedPath><commitId>f171684acef444671392c26ef4024cd5fb658cd2</commitId><timestamp>1617284142000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Further updates to help run the CGILS_S12 LES test case.
</comment><date>2021-04-01 08:35:42 -0500</date><id>f171684acef444671392c26ef4024cd5fb658cd2</id><msg>Further updates to help run the CGILS_S12 LES test case.</msg><path><editType>edit</editType><file>SRC/nudging.cgils</file></path><path><editType>edit</editType><file>SRC/setparm.F90</file></path><path><editType>edit</editType><file>SRC/surface.cgils</file></path><path><editType>edit</editType><file>SRC/grid.F90</file></path><path><editType>edit</editType><file>SRC/MICRO_DRIZZLE/microphysics.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>CGILS_S12/prm.ndgfix</affectedPath><affectedPath>CGILS_S12/prm</affectedPath><affectedPath>CGILS_S12/prm.advsel</affectedPath><affectedPath>CGILS_S12/prm.0</affectedPath><affectedPath>CGILS_S12/prm.ndgfix_new</affectedPath><affectedPath>CGILS_S12/prm.4x_adv</affectedPath><affectedPath>CGILS_S12/prm.adv_diurn</affectedPath><affectedPath>CGILS_S12/README</affectedPath><commitId>d78ada06f5cb37d47b9779cf4a4698b8ca916416</commitId><timestamp>1617284142000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Minor adjustments to prm files for cgils_s12 case, also including a working copy of the prm file that reproduces our local results.
</comment><date>2021-04-01 08:35:42 -0500</date><id>d78ada06f5cb37d47b9779cf4a4698b8ca916416</id><msg>Minor adjustments to prm files for cgils_s12 case, also including a working copy of the prm file that reproduces our local results.</msg><path><editType>edit</editType><file>CGILS_S12/prm.adv_diurn</file></path><path><editType>edit</editType><file>CGILS_S12/README</file></path><path><editType>edit</editType><file>CGILS_S12/prm.0</file></path><path><editType>edit</editType><file>CGILS_S12/prm.ndgfix</file></path><path><editType>edit</editType><file>CGILS_S12/prm.advsel</file></path><path><editType>edit</editType><file>CGILS_S12/prm.4x_adv</file></path><path><editType>edit</editType><file>CGILS_S12/prm</file></path><path><editType>add</editType><file>CGILS_S12/prm.ndgfix_new</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>SCRIPTS/LES_setup/setup_LES_KK_micro.bash</affectedPath><affectedPath>CGILS_S12/prm.ndgfix_new</affectedPath><affectedPath>CGILS_S12/prm.les</affectedPath><affectedPath>CGILS_S12/domain.f90.les</affectedPath><commitId>ef5bdb8b824980c85ff4f156baa970aa142915b1</commitId><timestamp>1617284142000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Editing the LES_setup script so that it automates everything to run the standard CGILS_S12 LES case.  Adding domain.f90.les and renaming the prm.ndgfix_new to prm.les so that the script will use these in the normal way.
</comment><date>2021-04-01 08:35:42 -0500</date><id>ef5bdb8b824980c85ff4f156baa970aa142915b1</id><msg>Editing the LES_setup script so that it automates everything to run the standard CGILS_S12 LES case.  Adding domain.f90.les and renaming the prm.ndgfix_new to prm.les so that the script will use these in the normal way.</msg><path><editType>edit</editType><file>SCRIPTS/LES_setup/setup_LES_KK_micro.bash</file></path><path><editType>add</editType><file>CGILS_S12/domain.f90.les</file></path><path><editType>delete</editType><file>CGILS_S12/prm.ndgfix_new</file></path><path><editType>add</editType><file>CGILS_S12/prm.les</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>SRC/nudging.cgils</affectedPath><affectedPath>SCRIPTS/LES_setup/setup_LES_KK_micro.bash</affectedPath><affectedPath>SRC/surface.cgils</affectedPath><commitId>e3f258a802a46a0407fbe103a6c7a3b801a2f62a</commitId><timestamp>1617284142000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Correcting some code in the LES setup script and fixing some comments in the cgils surface and nudging files.
</comment><date>2021-04-01 08:35:42 -0500</date><id>e3f258a802a46a0407fbe103a6c7a3b801a2f62a</id><msg>Correcting some code in the LES setup script and fixing some comments in the cgils surface and nudging files.</msg><path><editType>edit</editType><file>SRC/nudging.cgils</file></path><path><editType>edit</editType><file>SRC/surface.cgils</file></path><path><editType>edit</editType><file>SCRIPTS/LES_setup/setup_LES_KK_micro.bash</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>CGILS_S12/README</affectedPath><commitId>b1cd68f8ca511f74a80e93984396784b2b491c62</commitId><timestamp>1617284142000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Update README

Correcting new filename.
</comment><date>2021-04-01 08:35:42 -0500</date><id>b1cd68f8ca511f74a80e93984396784b2b491c62</id><msg>Update README</msg><path><editType>edit</editType><file>CGILS_S12/README</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>CGILS_S12/kurant.cgils</affectedPath><affectedPath>CGILS_S12/README</affectedPath><commitId>ed2b2d1e46f8eed6baadaa456b47ebade5852fcb</commitId><timestamp>1617284142000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Adding Peter Blossey's version of kurant.f90 (called kurant.cgils) in case it would ever be useful.  Updating README also to explain that file.
</comment><date>2021-04-01 08:35:42 -0500</date><id>ed2b2d1e46f8eed6baadaa456b47ebade5852fcb</id><msg>Adding Peter Blossey's version of kurant.f90 (called kurant.cgils) in case it would ever be useful.  Updating README also to explain that file.</msg><path><editType>edit</editType><file>CGILS_S12/README</file></path><path><editType>add</editType><file>CGILS_S12/kurant.cgils</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>SRC/MICRO_DRIZZLE/microphysics.F90</affectedPath><affectedPath>SRC/setparm.F90</affectedPath><commitId>5ce0eb44e28158f6ba8aaa060d44196a89c012d2</commitId><timestamp>1617284142000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Adding some comments to clarify these changes.
</comment><date>2021-04-01 08:35:42 -0500</date><id>5ce0eb44e28158f6ba8aaa060d44196a89c012d2</id><msg>Adding some comments to clarify these changes.</msg><path><editType>edit</editType><file>SRC/MICRO_DRIZZLE/microphysics.F90</file></path><path><editType>edit</editType><file>SRC/setparm.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>setup_clubb_pdf_params.F90</affectedPath><commitId>31b025210608cb57ae3038d3c5c5e29306611ace</commitId><timestamp>1617308426000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>More loop pushing. All bit-for-bit. larson-group/cam#129
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