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Bit-for-bit confirmed with O0 using all single column cases with or without l_diag_Lscale_from_tau, and with cam_coarse_res. larson-group/clubb#972", "paths" : [ { "editType" : "edit", "file" : "T_in_K_module.F90" }, { "editType" : "edit", "file" : "saturation.F90" }, { "editType" : "edit", "file" : "mixing_length.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "clubb_api_module.F90" }, { "editType" : "edit", "file" : "stats_clubb_utilities.F90" }, { "editType" : "edit", "file" : "pdf_closure_module.F90" }, { "editType" : "edit", "file" : "advance_helper_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "saturation.F90", "grid_class.F90", "T_in_K_module.F90", "clubb_api_module.F90" ], "commitId" : "a865626a53fb1243fe232896e89537ea0cb47684", "timestamp" : 1662512657000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/37674341+huebleruwm", "fullName" : 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Netcdf output is now functional and we can detect errors with multiple columns even when the standard output is identical.\u000a", "date" : "2022-10-05 11:47:10 -0500", "id" : "b480b13af511769f302c830635ad3f8c915ee90b", "msg" : "Improvements. 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Netcdf output is now functional and we can detect errors with multiple columns even when the standard output is identical.\u000a", "date" : "2022-10-05 11:47:10 -0500", "id" : "fb2e67620ac50c35b5cf20cb5e18a1a96d504a86", "msg" : "Improvements. Netcdf output is now functional and we can detect errors with multiple columns even when the standard output is identical.", "paths" : [ { "editType" : "edit", "file" : "output_netcdf.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "configurable_model_flags.in" ], "commitId" : "b3d012fd57fce4fdfdba880ae6842e9b039143ee", "timestamp" : 1665074836000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "Namelists need to be closed with a '/', and omitting it will break many tests.\u000a", "date" : "2022-10-06 11:47:16 -0500", "id" : "b3d012fd57fce4fdfdba880ae6842e9b039143ee", "msg" : "Namelists need to be closed with a '/', and omitting it will break many tests.", "paths" : [ { "editType" : "edit", "file" : "configurable_model_flags.in" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "configurable_model_flags.in" ], "commitId" : "d1147f62ff1c5ba047a6a5be4714968f253f2683", "timestamp" : 1665088226000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "Making save variables in the multicol code threadprivate, this fixes the openmp test. Also changing the way we name and save the multicol output, this allows the parallel run to run with multiple columns. I've reflected the changes in comments where relevant. larson-group/clubb#1033\u000a", "date" : "2022-10-06 15:30:26 -0500", "id" : "d1147f62ff1c5ba047a6a5be4714968f253f2683", "msg" : "Making save variables in the multicol code threadprivate, this fixes the openmp test. Also changing the way we name and save the multicol output, this allows the parallel run to run with multiple columns. I've reflected the changes in comments where relevant. larson-group/clubb#1033", "paths" : [ { "editType" : "edit", "file" : "configurable_model_flags.in" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_xm_wpxp_module.F90" ], "commitId" : "7e894655b82f891a5b60ba4e0e6670ff3c0fa5b0", "timestamp" : 1665426176000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Adds commented-out line that prevents the monotonic flux\u000a\u000alimiter from acting on rtm. The comments are included to remind us of how to do this in case we choose to do so in the future.\u000a", "date" : "2022-10-10 13:22:56 -0500", "id" : "7e894655b82f891a5b60ba4e0e6670ff3c0fa5b0", "msg" : "Adds commented-out line that prevents the monotonic flux", "paths" : [ { "editType" : "edit", "file" : "advance_xm_wpxp_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "mono_flux_limiter.F90" ], "commitId" : "4ba46bf534c3ed32f9227282f94b102f7006918e", "timestamp" : 1665672953000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Updating monotonic flux limiter code to remove spikes. (#1038)\u000a\u000aAlso putting a commented out code change in advance_xm_wpxp,\u000ain case shutting of the flux limiter entirely for rtm is preferred.\u000a\u000aSee https://github.com/NCAR/amwg_dev/discussions/134 for discussion.\u000a\u000aThis commit will be BIT_CHANGING although the differences are only\u000aobvious in sensitive cases like arm_97.\u000a", "date" : "2022-10-13 08:55:53 -0600", "id" : "4ba46bf534c3ed32f9227282f94b102f7006918e", "msg" : "Updating monotonic flux limiter code to remove spikes. (#1038)", "paths" : [ { "editType" : "edit", "file" : "mono_flux_limiter.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_clubb_core_module.F90", "model_flags.F90", "clubb_api_module.F90", "advance_xm_wpxp_module.F90", "mono_flux_limiter.F90" ], "commitId" : "f30bf0d926336356fdb094f944cfb1174a1ec225", "timestamp" : 1665761524000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Creating new flags to control monotonic flux limiter (#1039)\u000a\u000a* Creating new flags to control monotonic flux limiter and the IF statement fix for the spikes found in CAM.\u000a\u000a* Removing no-longer-necessary logical l_mono_flux_lim.\u000a\u000a* Adding requested changes from PR (intent statements and editing error statement).\u000a\u000a* Accidentally set flag to false. Changing to true.\u000a", "date" : "2022-10-14 09:32:04 -0600", "id" : "f30bf0d926336356fdb094f944cfb1174a1ec225", "msg" : "Creating new flags to control monotonic flux limiter (#1039)", "paths" : [ { "editType" : "edit", "file" : "model_flags.F90" }, { "editType" : "edit", "file" : "mono_flux_limiter.F90" }, { "editType" : "edit", "file" : "clubb_api_module.F90" }, { "editType" : "edit", "file" : "advance_xm_wpxp_module.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "configurable_model_flags.in" ], "commitId" : "f508c31512366c87e72e70ee26ba6d5e99869d18", "timestamp" : 1665761524000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Creating new flags to control monotonic flux limiter (#1039)\u000a\u000a* Creating new flags to control monotonic flux limiter and the IF statement fix for the spikes found in CAM.\u000a\u000a* Removing no-longer-necessary logical l_mono_flux_lim.\u000a\u000a* Adding requested changes from PR (intent statements and editing error statement).\u000a\u000a* Accidentally set flag to false. Changing to true.\u000a", "date" : "2022-10-14 09:32:04 -0600", "id" : "f508c31512366c87e72e70ee26ba6d5e99869d18", "msg" : "Creating new flags to control monotonic flux limiter (#1039)", "paths" : [ { "editType" : "edit", "file" : "configurable_model_flags.in" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "SRC/SGS_CLUBB/clubb_sgs.F90" ], "commitId" : "2c455c0350775d45d36b6ab922e4bbc56664e09e", "timestamp" : 1665761704000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82", "fullName" : "59519056+bstephens82" }, "authorEmail" : "59519056+bstephens82@users.noreply.github.com", "comment" : "Updating for changes to CLUBB. See https://github.com/larson-group/clubb/pull/1039.\u000a", "date" : "2022-10-14 09:35:04 -0600", "id" : "2c455c0350775d45d36b6ab922e4bbc56664e09e", "msg" : "Updating for changes to CLUBB. See https://github.com/larson-group/clubb/pull/1039.", "paths" : [ { "editType" : "edit", "file" : "SRC/SGS_CLUBB/clubb_sgs.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "pdf_closure_module.F90", "advance_clubb_core_module.F90", "stats_clubb_utilities.F90", "stats_variables.F90", "clubb_api_module.F90", "stats_zt_module.F90" ], "commitId" : "3bdab2ca5a22a425da62f8cae4c8e01097f44fa8", "timestamp" : 1665787786000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/bmg2", "fullName" : "bmg2" }, "authorEmail" : "bmg2@uwm.edu", "comment" : "I am adding cloudy_updraft_frac and cloudy_downdraft_frac as\u000aoutputs to the calculate_w_up_in_cloud code.\u000a\u000aThese fields are non-interactive for the standard set of cases.\u000aThus, all cases are bit-for-bit identical.\u000a\u000aHowever, for the w_up_in_cloud and w_down_in_cloud results themselves,\u000ait is possible that results might not be bit-for-bit since\u000athe location of the max(eps, ...) clipping in the denominator\u000ais changed. 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The subroutine has been restructured to\u000apush the i-loop further down to extract vectorization and parallelization.\u000aThe restructuring also involves introduction of sat_mixrat_liq_acc routines to\u000aextract parallelism when called inside a OpenACC parallel region.\u000a\u000aPorting: OpenACC directives are inserted to port the restructured compute_mixing_length\u000acode on to the GPUs. This port is currently unoptimized and there is still room for improvement.\u000a\u000aNOTE: Currently, l_sat_mixrat_lookup = false and saturation_formula = saturation_flatau\u000a(Earthworks config options) case is supported on OpenACC build. Any other options works\u000aon CPUs as usual. 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Changing sat_mixrat_liq_2D_acc\u000ato a subroutine from a function and adding output array, start_index as\u000aadditional argument. This is a workaround for passing sub-arrays. The OpenACC\u000adoen't like the sub-arrays being passed and fails the validation.\u000a\u000aPorting: OpenACC directives are added inside sat_mixrat_liq_2D_acc for porting\u000a\u000aValidation: Answers are Bit for Bit with arm-multicolumn case + nvhpc compiler\u000a\u000a* Fix for compilation issues\u000a\u000aIssue 1: Missed out declaring 'start_index' while intergrating the\u000achange\u000a\u000aIssue 2: The use of error_code module and the procedures inside it\u000acauses OpenACC compilation issues when run on the device.\u000a\u000a* Removing the sat_mixrat_liq_acc and sat_mixrat_liq_2D_acc, making the normal sat_mixrat_liq work for all current use cases, and making the other versions of sat_mixrat_liq (bolton,gfdl,lookup) functional with OPENACC.\u000a\u000aCo-authored-by: huebler \u000a", "date" : "2023-01-18 16:36:56 -0600", "id" : "38b63ff28ea145707d4ee1d9469013ee20b1697b", "msg" : "Restructuring and Porting of Compute_mixing_length subroutine(Phase 2) (#1054)", "paths" : [ { "editType" : "edit", "file" : "model_flags.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "saturation.F90" }, { "editType" : "edit", "file" : "mixing_length.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "mono_flux_limiter.F90" ], "commitId" : "9f86ec344fcdd14a084c6249520c33815e225c24", "timestamp" : 1674153381000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Breaking up column loop in mono_flux_limiter. This may not be the final form for GPUization, but it's definitely a start, no longer do we have to copy single column variables to multicolumn ones anywhere. (#1051)\u000a\u000a", "date" : "2023-01-19 12:36:21 -0600", "id" : "9f86ec344fcdd14a084c6249520c33815e225c24", "msg" : "Breaking up column loop in mono_flux_limiter. This may not be the final form for GPUization, but it's definitely a start, no longer do we have to copy single column variables to multicolumn ones anywhere. 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These data regions will converted to unstrucutred\u000adata region in the later optimization phase.\u000aResults are bit for bit.\u000a", "date" : "2023-01-24 18:10:01 +0100", "id" : "79e3b2b05f93ffc04d514aad915c1a0aaec0f45f", "msg" : "Adding OpenACC data directives for mixing length and adg routines", "paths" : [ { "editType" : "edit", "file" : "adg1_adg2_3d_luhar_pdf.F90" }, { "editType" : "edit", "file" : "mixing_length.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "adg1_adg2_3d_luhar_pdf.F90" ], "commitId" : "466f229f2b977abcc4be9ac96c4ac11b818d1d37", "timestamp" : 1674585724000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "Fixing error causing GPU code not to run. Some variables to be copied were labelled as (ngrdcol,nz) when it should be (:ngrdcol,:nz). 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RESOLVED:8c7230fecb877d04fb129ef5e143e0993b4b29b1\u000a", "date" : "2023-02-04 17:22:00 -0600", "id" : "6f870bb99c6f94145ebef421ea0435ac083e84f1", "msg" : "Removing update_pressure from public list. This was causing compilation crashes. 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This is a bug which was causing the code to crash when not using managed memory.\u000a", "date" : "2023-02-07 11:34:28 -0600", "id" : "5543d4fdcd60911bcef0658fc693b9ddc50a0e4a", "msg" : "Removing sigma_sqd_w from the acc data copyout statement. This is a bug which was causing the code to crash when not using managed memory.", "paths" : [ { "editType" : "edit", "file" : "adg1_adg2_3d_luhar_pdf.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "pdf_utilities.F90", "pdf_closure_module.F90" ], "commitId" : "02732556bd0ed380f305bb59f5e421e5a4c615a8", "timestamp" : 1675902842000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Porting pdf_closure subroutine with OpenACC (#1059)\u000a\u000a* Porting pdf_closure subroutine with OpenACC\u000a\u000aOpenACC directives are added to pdf_closure subroutine. 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There is opportunity to task parallelize using streams and\u000awill be explored in the future.\u000a\u000aAnswers are bit for bit.\u000a\u000a* Fixing the copyin directives\u000a\u000a* Making work without managed memory.\u000a", "date" : "2023-02-08 18:34:02 -0600", "id" : "02732556bd0ed380f305bb59f5e421e5a4c615a8", "msg" : "Porting pdf_closure subroutine with OpenACC (#1059)", "paths" : [ { "editType" : "edit", "file" : "pdf_closure_module.F90" }, { "editType" : "edit", "file" : "pdf_utilities.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "stats_variables.F90", "stats_zm_module.F90", "stats_clubb_utilities.F90", "advance_clubb_core_module.F90" ], "commitId" : "74d62d932283ec7f668d1ab7a7eb5cf4c2518e31", "timestamp" : 1676661825000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/bmg2", "fullName" : "bmg2" }, "authorEmail" : "bmg2@uwm.edu", "comment" : "Adding wp3_on_wp2_cfl_num to CLUBB's output stats.\u000a", "date" : "2023-02-17 13:23:45 -0600", "id" : "74d62d932283ec7f668d1ab7a7eb5cf4c2518e31", "msg" : "Adding wp3_on_wp2_cfl_num to CLUBB's output stats.", "paths" : [ { "editType" : "edit", "file" : "stats_variables.F90" }, { "editType" : "edit", "file" : "stats_zm_module.F90" }, { "editType" : "edit", "file" : "stats_clubb_utilities.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_clubb_core_module.F90", "pdf_closure_module.F90", "adg1_adg2_3d_luhar_pdf.F90" ], "commitId" : "2cfb4126e2acaad338d58387801f2f0e69f2be66", "timestamp" : 1677519729000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/37674341+huebleruwm", "fullName" : "37674341+huebleruwm" }, "authorEmail" : "37674341+huebleruwm@users.noreply.github.com", "comment" : "Removing usage of gr from pdf_closure. It was only ever used for nz, which is now fed in directly.\u000a", "date" : "2023-02-27 11:42:09 -0600", "id" : "2cfb4126e2acaad338d58387801f2f0e69f2be66", "msg" : "Removing usage of gr from pdf_closure. It was only ever used for nz, which is now fed in directly.", "paths" : [ { "editType" : "edit", "file" : "adg1_adg2_3d_luhar_pdf.F90" }, { "editType" : "edit", "file" : "pdf_closure_module.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "pdf_closure_module.F90" ], "commitId" : "90851771d55ebaeb104a3bd7edae92ffd4a248a6", "timestamp" : 1677613563000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Clubb ticket #1025: Implemented way to make esa tuner reproducible, h… (#1068)\u000a\u000a* Clubb ticket #1025: Implemented way to make esa tuner reproducible, hid error output of optional diagnostic variables behind check, fixed parallelization issue with tuner, esa max_iters parameter is now in stats namelist, fixed issue with TUNER compiler directive, some small fixes.\u000a- New namelist variables prescribed_rand_seed and l_use_prescribed_rand_seed determine if the esa tuner will use a random or a fixed value as random seed. Added descriptions to README.\u000a- Added max_iters to stats namelist to make it more modifiable.\u000a- Renamed stp_adjst_intercept_in and stp_adjst_slope_in to stp_adjst_shift_in and stp_adjst_factor_in, respectively, to better reflect their influence on step size.\u000a- The error output in src/CLUBB_core/pdf_closure_module.F90 for the diagnostic variables wprtp2, wpthlp2, wprtpthlp, and rcp2 is now hidden behind existence checks for these variables. And a clarification was added to \"#ifdef TUNER\" directive.\u000a- NetCDF file access caused the tuner to crash in parallel mode (-fopenmp flag in config file and multiple cases). Adding an $OMP CRITICAL structure around the call to stats_init in clubb_driver.F90 fixed that.\u000a- Fixed compile/README. Config files are specified with the -c option.\u000a- The -t option in run_scripts/run_tuner.bash interfered with the previous usage of the TUNER compiler directive. Renamed the old TUNER directive to NR_SP, a short for \"numerical recipes, single precision\". TUNER now is the option to \"turn on\" code changes required to run the tuner.\u000a", "date" : "2023-02-28 13:46:03 -0600", "id" : "90851771d55ebaeb104a3bd7edae92ffd4a248a6", "msg" : "Clubb ticket #1025: Implemented way to make esa tuner reproducible, h… (#1068)", "paths" : [ { "editType" : "edit", "file" : "pdf_closure_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "pdf_utilities.F90", "mixing_length.F90", "saturation.F90", "advance_clubb_core_module.F90", "mean_adv.F90", "pdf_closure_module.F90", "adg1_adg2_3d_luhar_pdf.F90", "grid_class.F90", "turbulent_adv_pdf.F90" ], "commitId" : "61ea0db56546ea2946cb3c0ee368fd57752c1451", "timestamp" : 1678297579000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Gpu updates (#1070)\u000a\u000a* Fixing bug. This was only triggered when l_input_fields=.true., which I am only testing because it needs to be true so that I can test ADG2_driver.\u000a\u000a* Removing usage of gr from pdf_closure. It was only ever used for nz, which is now fed in directly.\u000a\u000a* Making openacc statements more consistent. Ensuring all statments on double loops have specified gang and vector, and that all parallel loops have an end parallel loop statment at the end of them. Everything BFB on CPUs and GPUs.\u000a\u000a* Pushing acc data region to outermost parts of mixing_length.\u000a\u000a* Removing pdf_implicit_coefs_terms from acc copyin and copyout. It is only used when iiPDF_type == iiPDF_new .or. iiPDF_type == iiPDF_new_hybrid, so we do not need to do any copying with it. The inclusion of it also caused the data statement to copy unallocated arrays, which are just garbage pointers, and that was causing random occasional crashes (either segfaults or gpu out of memory).\u000a\u000a* The update device clauses for return variables seems to only be requried for arrays contained in types. See https://github.com/larson-group/clubb/issues/1049\\#issuecomment-1440624778\u000a\u000a* Moving acc end data to end of pdf_closure. This reuqired removing any conditional return statements that appear before the final return, since we're not allowed to branch out of an acc region early. I also moved a large printout statement outside of a loop. The only reason it was in the loop to begin with was because pdf_params used to be an array of types, but now is a type of arrays, allowing us to print the full arrays directly.\u000a\u000a* Making loop an acc loop. If we weren't outputting w_[up/down]_in_cloud (iw_up_in_cloud <= 0 .or. iw_down_in_cloud <= 0, then these arrays were only being zerod out on the CPU and would've getting overwritten by the uninitialized GPU data at the end of the data statement. This change causes the arrays to get correctly zerod out on the GPU when we need.\u000a\u000a* Update VariableGroupNondimMoments.py\u000a\u000aFixed a typo\u000a\u000a* Merging new changes from master\u000a\u000a* Removing need for -gpu=deepcopy, pushing some acc data statements up call tree, and replacing some acc data statements with acc delare statements so that return statements can be added back in.\u000a\u000a* Adding back an acc loop that was accidentally removed during a merge.\u000a\u000a---------\u000a\u000aCo-authored-by: Brian Griffin <31553422+bmg929@users.noreply.github.com>\u000a", "date" : "2023-03-08 11:46:19 -0600", "id" : "61ea0db56546ea2946cb3c0ee368fd57752c1451", "msg" : "Gpu updates (#1070)", "paths" : [ { "editType" : "edit", "file" : "adg1_adg2_3d_luhar_pdf.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "pdf_utilities.F90" }, { "editType" : "edit", "file" : "saturation.F90" }, { "editType" : "edit", "file" : "turbulent_adv_pdf.F90" }, { "editType" : "edit", "file" : "mean_adv.F90" }, { "editType" : "edit", "file" : "pdf_closure_module.F90" }, { "editType" : "edit", "file" : "mixing_length.F90" }, { "editType" : "edit", "file" : "grid_class.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "mono_flux_limiter.F90" ], "commitId" : "fdf454198c75d605df4d989599620e23c42135fe", "timestamp" : 1678350700000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Implements Thomas Toniazzo's bug fix for spike removal\u000a\u000ain the monotonic flux limiter. 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(#1072)\u000a\u000a* Converting the sfc_varnce_module.F90 parameter 'a_const' into a CLUBB tunable parameter.\u000a\u000aResults should be bit-for-bit since it will be set to 1.8 and with l_vary_convect_depth=F\u000athis is the standard value.\u000a\u000aSome discussion in ticket #994.\u000a\u000a* Completing requested changes, see PR #1072.\u000a", "date" : "2023-03-13 10:06:05 -0600", "id" : "e2ffb7330b8d80d9d895759c6a1781239ec00141", "msg" : "Making 'a_const' into a CLUBB tunable parameter. 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(#1072)\u000a\u000a* Converting the sfc_varnce_module.F90 parameter 'a_const' into a CLUBB tunable parameter.\u000a\u000aResults should be bit-for-bit since it will be set to 1.8 and with l_vary_convect_depth=F\u000athis is the standard value.\u000a\u000aSome discussion in ticket #994.\u000a\u000a* Completing requested changes, see PR #1072.\u000a", "date" : "2023-03-13 10:06:05 -0600", "id" : "ea8e240b701e58890146b050319eb71c919a70e0", "msg" : "Making 'a_const' into a CLUBB tunable parameter. 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See PR #1072.", "paths" : [ { "editType" : "edit", "file" : "SRC/SGS_CLUBB/clubb_sgs.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "Skx_module.F90", "pdf_closure_module.F90", "sigma_sqd_w_module.F90", "advance_clubb_core_module.F90", "T_in_K_module.F90" ], "commitId" : "1463a2c08c088d8c28aaf6831e88e234b76bdddd", "timestamp" : 1678812234000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Pdf closure driver gpuization (#1071)\u000a\u000a* GPUizing pdf_closure_driver, testing still needed, bug likely.\u000a\u000a* Making data movement better. Also fixed some random things. Still need to return returns.\u000a\u000a* Adding back a couple return statments. Moving a comment where it should be. GPUizing a missed loop.\u000a\u000a* Making arguements list satisfy standards.\u000a\u000a* Making arguements list satisfy standards. Also adding max(1,hydrometdim) to hydromet inputs.\u000a\u000a* Capitalizing K\u000a\u000a* Making the error case in compute_cloud_cover behavior a bit differently. This allows the error to be detected immediately by GPU runs as well.\u000a\u000a* Calling compute_cloud_cover only needs to be done if l_use_cloud_cover = .true.\u000a", "date" : "2023-03-14 11:43:54 -0500", "id" : "1463a2c08c088d8c28aaf6831e88e234b76bdddd", "msg" : "Pdf closure driver gpuization (#1071)", "paths" : [ { "editType" : "edit", "file" : "sigma_sqd_w_module.F90" }, { "editType" : "edit", "file" : "Skx_module.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "T_in_K_module.F90" }, { "editType" : "edit", "file" : "pdf_closure_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_clubb_core_module.F90" ], "commitId" : "6dd01b5920350c08035fa76d513f4086340a43f7", "timestamp" : 1679006580000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "Moving compute_cloud_cover outside of if ( l_use_cloud_cover ) then statement, the cloud_cover and rcm_in_layer variables they compute aren't output in clubb_standalone, but are in cam, causing cam bit diff tests to break.\u000a", "date" : "2023-03-16 17:43:00 -0500", "id" : "6dd01b5920350c08035fa76d513f4086340a43f7", "msg" : "Moving compute_cloud_cover outside of if ( l_use_cloud_cover ) then statement, the cloud_cover and rcm_in_layer variables they compute aren't output in clubb_standalone, but are in cam, causing cam bit diff tests to break.", "paths" : [ { "editType" : "edit", "file" : "advance_clubb_core_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_clubb_core_module.F90" ], "commitId" : "f635d227db08b38aa005bebbc8d0e63c4d6ea9ce", "timestamp" : 1679530369000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "Adding Skthl_zm to the update host list, I missed this in the last PR. I noticed this by comparing results with and without managed memory, now I've checked BFBness with arm, mpace_b, mc3e, and gabls2.\u000a", "date" : "2023-03-22 19:12:49 -0500", "id" : "f635d227db08b38aa005bebbc8d0e63c4d6ea9ce", "msg" : "Adding Skthl_zm to the update host list, I missed this in the last PR. I noticed this by comparing results with and without managed memory, now I've checked BFBness with arm, mpace_b, mc3e, and gabls2.", "paths" : [ { "editType" : "edit", "file" : "advance_clubb_core_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "grid_class.F90", "turbulent_adv_pdf.F90", "mixing_length.F90", "pdf_utilities.F90", "saturation.F90", "advance_clubb_core_module.F90", "mean_adv.F90", "Skx_module.F90", "pdf_closure_module.F90", "sigma_sqd_w_module.F90", "adg1_adg2_3d_luhar_pdf.F90", "T_in_K_module.F90", "parameters_model.F90" ], "commitId" : "adba51a83aea7bd6e044720c58e4d27596b235fa", "timestamp" : 1679711434000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Small GPU fixes (#1076)\u000a\u000a* Fixing small things that I caught by adding the default(present) onto acc loops.\u000a\u000a* Moving default(present) to the end because it looks nicer there.\u000a", "date" : "2023-03-24 21:30:34 -0500", "id" : "adba51a83aea7bd6e044720c58e4d27596b235fa", "msg" : "Small GPU fixes (#1076)", "paths" : [ { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "mean_adv.F90" }, { "editType" : "edit", "file" : "sigma_sqd_w_module.F90" }, { "editType" : "edit", "file" : "adg1_adg2_3d_luhar_pdf.F90" }, { "editType" : "edit", "file" : "mixing_length.F90" }, { "editType" : "edit", "file" : "Skx_module.F90" }, { "editType" : "edit", "file" : "parameters_model.F90" }, { "editType" : "edit", "file" : "grid_class.F90" }, { "editType" : "edit", "file" : "pdf_closure_module.F90" }, { "editType" : "edit", "file" : "T_in_K_module.F90" }, { "editType" : "edit", "file" : "saturation.F90" }, { "editType" : "edit", "file" : "turbulent_adv_pdf.F90" }, { "editType" : "edit", "file" : "pdf_utilities.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_wp2_wp3_module.F90", "advance_clubb_core_module.F90", "model_flags.F90", "clip_explicit.F90", "clubb_api_module.F90" ], "commitId" : "7435d1c799f340302393782cc58d5f7eaeb608ef", "timestamp" : 1680247062000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/bmg2", "fullName" : "bmg2" }, "authorEmail" : "bmg2@uwm.edu", "comment" : "Code changes to implement modificiations on wp3 clippings\u000aThis commit contains code changes to implement modifications of skewness\u000aclippings on wp3 in src/CLUBB_core/clip_explicit.F90. The default method attempts\u000ato apply smaller (larger) clippings below (above) 100m AGL level, which\u000acan cause a discontinuities around 100m AGL level. This clippings is\u000afound to trigger sawthooth oscillations in wp3 when linear diffusion is\u000aused. Such swathooth oscillations are eleminated if a smoothed Heaviside\u000afunction is introduced to obtain a smooth transition of clippings at\u000aaround 100m AGL level. The changes is necessary to obtain the first\u000aorder convergence in CLUBB-SCM when lienar diffusion is used.\u000a\u000aPreviously committed by Shixuan.\u000a", "date" : "2023-03-31 02:17:42 -0500", "id" : "7435d1c799f340302393782cc58d5f7eaeb608ef", "msg" : "Code changes to implement modificiations on wp3 clippings", "paths" : [ { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "clip_explicit.F90" }, { "editType" : "edit", "file" : "model_flags.F90" }, { "editType" : "edit", "file" : "advance_wp2_wp3_module.F90" }, { "editType" : "edit", "file" : "clubb_api_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "configurable_model_flags.in" ], "commitId" : "43c7d40b518380bcd2ac664595a15a9d60fc1e23", "timestamp" : 1680247062000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/bmg2", "fullName" : "bmg2" }, "authorEmail" : "bmg2@uwm.edu", "comment" : "Code changes to implement modificiations on wp3 clippings\u000aThis commit contains code changes to implement modifications of skewness\u000aclippings on wp3 in src/CLUBB_core/clip_explicit.F90. The default method attempts\u000ato apply smaller (larger) clippings below (above) 100m AGL level, which\u000acan cause a discontinuities around 100m AGL level. This clippings is\u000afound to trigger sawthooth oscillations in wp3 when linear diffusion is\u000aused. Such swathooth oscillations are eleminated if a smoothed Heaviside\u000afunction is introduced to obtain a smooth transition of clippings at\u000aaround 100m AGL level. The changes is necessary to obtain the first\u000aorder convergence in CLUBB-SCM when lienar diffusion is used.\u000a\u000aPreviously committed by Shixuan.\u000a", "date" : "2023-03-31 02:17:42 -0500", "id" : "43c7d40b518380bcd2ac664595a15a9d60fc1e23", "msg" : "Code changes to implement modificiations on wp3 clippings", "paths" : [ { "editType" : "edit", "file" : "configurable_model_flags.in" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "mixing_length.F90", "advance_clubb_core_module.F90", "model_flags.F90", "clubb_api_module.F90", "advance_helper_module.F90" ], "commitId" : "16fcc9ba1c2ab85f00a4d798dccf7a59cbfc718b", "timestamp" : 1680538287000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/bmg2", "fullName" : "bmg2" }, "authorEmail" : "bmg2@uwm.edu", "comment" : "This commit contains code changes to implement modifications on limiters in three places:\u000a\u000a1. remove the limiters in denominator of equation for\u000a brunt_vaisala_freq_sqd_smth, which affects the computed\u000a eddy dissipation time scale in turbulent fluxes (wpxp).\u000a (in mixing_length.F90)\u000a\u000a2. reduce the threshold values of limiters in the equation\u000a for richardson number (sqrt_Ri_zm)\u000a (in mixing_length.F90)\u000a\u000a3. introduce the smoothed max/min function for limiters in\u000a equation of Cx_fnc_Richardson.\u000a (in advance_helper_module.F90).\u000a\u000aAfter the modification, we also apply a zt2m(zm2zt) smoothing\u000aon the calculated quantities. These modifications are found to\u000abe benificial for improving solution convergence in CLUBB-SCM\u000a\u000aThe code changes are controlled by a newly introduced flag named\u000a\"l_modify_limiters_for_cnvg_test\", which is set to .false. (meaning that\u000athe modificaitons on limiters is turned off) by default.\u000a\u000aOriginally committed by Shixuan.\u000a", "date" : "2023-04-03 11:11:27 -0500", "id" : "16fcc9ba1c2ab85f00a4d798dccf7a59cbfc718b", "msg" : "This commit contains code changes to implement modifications on limiters in three places:", "paths" : [ { "editType" : "edit", "file" : "advance_helper_module.F90" }, { "editType" : "edit", "file" : "clubb_api_module.F90" }, { "editType" : "edit", "file" : "model_flags.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "mixing_length.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "configurable_model_flags.in" ], "commitId" : "bbdd1ade0e614bb47e5341e8f9fb0f853320cd37", "timestamp" : 1680538287000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/bmg2", "fullName" : "bmg2" }, "authorEmail" : "bmg2@uwm.edu", "comment" : "This commit contains code changes to implement modifications on limiters in three places:\u000a\u000a1. remove the limiters in denominator of equation for\u000a brunt_vaisala_freq_sqd_smth, which affects the computed\u000a eddy dissipation time scale in turbulent fluxes (wpxp).\u000a (in mixing_length.F90)\u000a\u000a2. reduce the threshold values of limiters in the equation\u000a for richardson number (sqrt_Ri_zm)\u000a (in mixing_length.F90)\u000a\u000a3. introduce the smoothed max/min function for limiters in\u000a equation of Cx_fnc_Richardson.\u000a (in advance_helper_module.F90).\u000a\u000aAfter the modification, we also apply a zt2m(zm2zt) smoothing\u000aon the calculated quantities. These modifications are found to\u000abe benificial for improving solution convergence in CLUBB-SCM\u000a\u000aThe code changes are controlled by a newly introduced flag named\u000a\"l_modify_limiters_for_cnvg_test\", which is set to .false. (meaning that\u000athe modificaitons on limiters is turned off) by default.\u000a\u000aOriginally committed by Shixuan.\u000a", "date" : "2023-04-03 11:11:27 -0500", "id" : "bbdd1ade0e614bb47e5341e8f9fb0f853320cd37", "msg" : "This commit contains code changes to implement modifications on limiters in three places:", "paths" : [ { "editType" : "edit", "file" : "configurable_model_flags.in" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "SRC/SGS_CLUBB/clubb_sgs.F90" ], "commitId" : "0c36e4d0e18216f9e07c93f9d23a4ee6cda7772b", "timestamp" : 1680548426000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/bmg2", "fullName" : "bmg2" }, "authorEmail" : "bmg2@uwm.edu", "comment" : "Updated for recent changes to CLUBB.\u000a", "date" : "2023-04-03 14:00:26 -0500", "id" : "0c36e4d0e18216f9e07c93f9d23a4ee6cda7772b", "msg" : "Updated for recent changes to CLUBB.", "paths" : [ { "editType" : "edit", "file" : "SRC/SGS_CLUBB/clubb_sgs.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "tunable_parameters.in" ], "commitId" : "7b3e07a340d0a20ceb50121b98b17575a70940d1", "timestamp" : 1680705925000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/cernikt", "fullName" : "cernikt" }, "authorEmail" : "tjcernik@uwm.edu", "comment" : "changing tunable_parameters\u000a", "date" : "2023-04-05 09:45:25 -0500", "id" : "7b3e07a340d0a20ceb50121b98b17575a70940d1", "msg" : "changing tunable_parameters", "paths" : [ { "editType" : "edit", "file" : "tunable_parameters.in" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "tunable_parameters.in" ], "commitId" : "75f7b52f068621eb5ee822dd7949639fefcebe59", "timestamp" : 1680706442000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/cernikt", "fullName" : "cernikt" }, "authorEmail" : "tjcernik@uwm.edu", "comment" : "changing tunable_parameters\u000a", "date" : "2023-04-05 09:54:02 -0500", "id" : "75f7b52f068621eb5ee822dd7949639fefcebe59", "msg" : "changing tunable_parameters", "paths" : [ { "editType" : "edit", "file" : "tunable_parameters.in" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "tunable_parameters.in" ], "commitId" : "f0d6b74bd5227cb61694f641b178a1d9d7a22f27", "timestamp" : 1680706472000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/cernikt", "fullName" : "cernikt" }, "authorEmail" : "tjcernik@uwm.edu", "comment" : "changing tunable_parameters\u000a", "date" : "2023-04-05 09:54:32 -0500", "id" : "f0d6b74bd5227cb61694f641b178a1d9d7a22f27", "msg" : "changing tunable_parameters", "paths" : [ { "editType" : "edit", "file" : "tunable_parameters.in" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "diffusion.F90", "advance_clubb_core_module.F90", "clip_explicit.F90", "advance_xm_wpxp_module.F90", "mean_adv.F90", "fill_holes.F90", "grid_class.F90", "matrix_solver_wrapper.F90", "turbulent_adv_pdf.F90", "parameters_model.F90", "advance_helper_module.F90", "mono_flux_limiter.F90" ], "commitId" : "781ef9dfc3079f5d20cf22f044eac5970443c1b9", "timestamp" : 1680716686000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Advance xm wpxp gpuization (#1077)\u000a\u000a* Initial commit for GPUizing advance_xm_wpxp.\u000a\u000a* GPUizing fill_holes_vertical\u000a\u000a* Adding Skthl_zm to the update host list, I missed this in the last PR. I noticed this by comparing results with and without managed memory, now I've checked BFBness with arm, mpace_b, mc3e, and gabls2.\u000a\u000a* Small GPU fixes (#1076)\u000a\u000a* Fixing small things that I caught by adding the default(present) onto acc loops.\u000a\u000a* Moving default(present) to the end because it looks nicer there.\u000a\u000a* Adding default(present) to all acc loop statements. Also adding azt to a copyin statement, which was missed previously. All BFB.\u000a\u000a* Incemental update, not well tested yet.\u000a\u000a* Removing some copies and making the sclr_dim change.\u000a\u000a* Fixing a bug that only seemed detectable with astex_a209. We need to pass only single arrays to functions, calling ddzt( nz, ngrdcol, gr, rho_ds_zt * K_zt_nu ) was resulting in rho_ds_zt * K_zt_nu being evluated on the CPU, but the values were only valid on the GPU. So we need to evaluate that expression on the GPU, save it into an array (currently K_zt_nu_tmp), then pass that to ddzt.\u000a\u000a* GPUizing calc_turb_adv_range\u000a\u000a* GPUizing mono_flux_limiter\u000a\u000a* Cleaning up data statments and a couple other things.\u000a\u000a* Updated for some different options.\u000a\u000a* More updates needed for various options.\u000a\u000a* Reverting accidental flag change\u000a\u000a* Should be the final changes, all options tested now.\u000a\u000a* Replacing some comments in monoflux limiter, and also modifying it to make it BFB on CPUs. Also changing incorrect error conditions on tridiag.\u000a\u000a* Adding max_x_allowable to update host statement, missed previous.\u000a\u000a* Properly naming tmp variables and variables calculated from ddzt and ddzm start with ddzt_ and ddzm_.\u000a\u000a* Replacing constants with named ones from constants_clubb.\u000a\u000a* Replacing hard coded numbers in lhs variables representing the number of bands they contain with fortran parameters.\u000a", "date" : "2023-04-05 12:44:46 -0500", "id" : "781ef9dfc3079f5d20cf22f044eac5970443c1b9", "msg" : "Advance xm wpxp gpuization (#1077)", "paths" : [ { "editType" : "edit", "file" : "grid_class.F90" }, { "editType" : "edit", "file" : "fill_holes.F90" }, { "editType" : "edit", "file" : "clip_explicit.F90" }, { "editType" : "edit", "file" : "advance_helper_module.F90" }, { "editType" : "edit", "file" : "advance_xm_wpxp_module.F90" }, { "editType" : "edit", "file" : "mono_flux_limiter.F90" }, { "editType" : "edit", "file" : "matrix_solver_wrapper.F90" }, { "editType" : "edit", "file" : "turbulent_adv_pdf.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "parameters_model.F90" }, { "editType" : "edit", "file" : "diffusion.F90" }, { "editType" : "edit", "file" : "mean_adv.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_xm_wpxp_module.F90" ], "commitId" : "4e5ef2859907a8a3e8b44fea718de72c509ae1a4", "timestamp" : 1680733435000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "Small tweaks to fix some GPU bugs. Some variables were uninitialized on the CPU while we were saving them. This could only have been caught by comparing consecutive runs and checking _zt and _zm files, even then few cases were having problems.\u000a", "date" : "2023-04-05 17:23:55 -0500", "id" : "4e5ef2859907a8a3e8b44fea718de72c509ae1a4", "msg" : "Small tweaks to fix some GPU bugs. Some variables were uninitialized on the CPU while we were saving them. This could only have been caught by comparing consecutive runs and checking _zt and _zm files, even then few cases were having problems.", "paths" : [ { "editType" : "edit", "file" : "advance_xm_wpxp_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "grid_class.F90" ], "commitId" : "9552ab496758875cdb5dff86d47d80e2d3a7cb0f", "timestamp" : 1680734063000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "Fixing a labelling error in redirect_interpolated_azt_2D and similar procedures, since this interpolates to zt the input should be zm. I think this was my fault, so I cleaned all the zt2zm and zm2zt things up to make it a little nicer. Also ordered the routines _k _1D _2D to make it easier to jump around, it was a bit confusing as they were out of order and the typo really made it hard.\u000a", "date" : "2023-04-05 17:34:23 -0500", "id" : "9552ab496758875cdb5dff86d47d80e2d3a7cb0f", "msg" : "Fixing a labelling error in redirect_interpolated_azt_2D and similar procedures, since this interpolates to zt the input should be zm. I think this was my fault, so I cleaned all the zt2zm and zm2zt things up to make it a little nicer. Also ordered the routines _k _1D _2D to make it easier to jump around, it was a bit confusing as they were out of order and the typo really made it hard.", "paths" : [ { "editType" : "edit", "file" : "grid_class.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "parameters_model.F90" ], "commitId" : "c3bec1875abeade74fe0dd0cd38cb5361e7cac8f", "timestamp" : 1680842443000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "Making it so sclr_tol is set to 0 before the specified sclr_tol_in. This is so that it is initialized to 0 in the case that sclr_dim = 0, since now we are setting it to have a minimum allocation size of 1 and would otherwise have a garbage value. This is what broke the clubb_openmp_gfortran_test.\u000a", "date" : "2023-04-06 23:40:43 -0500", "id" : "c3bec1875abeade74fe0dd0cd38cb5361e7cac8f", "msg" : "Making it so sclr_tol is set to 0 before the specified sclr_tol_in. This is so that it is initialized to 0 in the case that sclr_dim = 0, since now we are setting it to have a minimum allocation size of 1 and would otherwise have a garbage value. This is what broke the clubb_openmp_gfortran_test.", "paths" : [ { "editType" : "edit", "file" : "parameters_model.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "mixing_length.F90", "grid_class.F90", "advance_clubb_core_module.F90", "clip_explicit.F90", "advance_helper_module.F90" ], "commitId" : "40a65a54f061974152b9431e88a562d557f70dc5", "timestamp" : 1681924858000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Lscale GPUization (#1079)\u000a\u000a* Making 2 new functions zm2zt2zm and zt2zm2zt to handle smoothing by interpolation. Replaced the spots in clubb I know that uses this to smooth things. This is just a nice to have and could allow for easy optimizations in the future by inlining the interpolations. All cases BFB on CPU and GPU, checked all relevant options too.\u000a\u000a* GPUizing diagnose_Lscale_from_tau\u000a\u000a* Removing some unused variables.\u000a\u000a* Moving acc data statements from calc_Lscale_directly up to advance_clubb_core.\u000a\u000a* Removing an unused variable.\u000a\u000a* GPUizing the l_smooth_min_max option.\u000a\u000a* GPUizing l_avg_Lscale\u000a\u000a* Changes to variable names to avoid gross long names only used once.\u000a", "date" : "2023-04-19 12:20:58 -0500", "id" : "40a65a54f061974152b9431e88a562d557f70dc5", "msg" : "Lscale GPUization (#1079)", "paths" : [ { "editType" : "edit", "file" : "grid_class.F90" }, { "editType" : "edit", "file" : "mixing_length.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "advance_helper_module.F90" }, { "editType" : "edit", "file" : "clip_explicit.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "grid_class.F90" ], "commitId" : "7094e3620ee063af2bd55a8f072cb32ce3858c4b", "timestamp" : 1681926818000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/huebler", "fullName" : "Gunther Huebler" }, "authorEmail" : "huebler@uwm.edu", "comment" : "gfortran does not like intent(out) specifiers for functions.\u000a", "date" : "2023-04-19 12:53:38 -0500", "id" : "7094e3620ee063af2bd55a8f072cb32ce3858c4b", "msg" : "gfortran does not like intent(out) specifiers for functions.", "paths" : [ { "editType" : "edit", "file" : "grid_class.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "Skx_module.F90", "sigma_sqd_w_module.F90", "interpolation.F90", "advance_clubb_core_module.F90", "calc_pressure.F90", "advance_helper_module.F90" ], "commitId" : "e12416aef4fd25ee8f843abab95e16d9a186d57e", "timestamp" : 1682105140000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "GPUizing Various Small Routines (#1080)\u000a\u000a* GPUizing compute_Cx_fnc_Richardson\u000a\u000a* GPUizing term_wp2_splat and term_wp3_splat\u000a\u000a* GPUizing xp3_LG_2005_ansatz\u000a\u000a* GPUizing calculate_thvm\u000a\u000a* GPUizing pvertinterp even though I don't think we care about the l_do_expldiff_rtm_thlm flag\u000a\u000a* Fixing bug. Setting l_do_expldiff_rtm_thlm causes us to use edsclrm, so we need to also ensure that edsclrm > 1 (1 because it uses a edsclr_dim-1 index)\u000a\u000a* Pushing some data statements up the call tree.\u000a", "date" : "2023-04-21 14:25:40 -0500", "id" : "e12416aef4fd25ee8f843abab95e16d9a186d57e", "msg" : "GPUizing Various Small Routines (#1080)", "paths" : [ { "editType" : "edit", "file" : "Skx_module.F90" }, { "editType" : "edit", "file" : "interpolation.F90" }, { "editType" : "edit", "file" : "calc_pressure.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "sigma_sqd_w_module.F90" }, { "editType" : "edit", "file" : "advance_helper_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "grid_class.F90" ], "commitId" : "0dbf4fc79c628d0d783a67b545a14792662177a3", "timestamp" : 1682273667000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/cernikt", "fullName" : "cernikt" }, "authorEmail" : "tjcernik@uwm.edu", "comment" : "This commit is a commit that changes absolutely nothing. It is meant to trigger a change in the git update scripts, so that I can start the commit message logging in the autocommit updates larson-group/sys_admin#797\u000a", "date" : "2023-04-23 13:14:27 -0500", "id" : "0dbf4fc79c628d0d783a67b545a14792662177a3", "msg" : "This commit is a commit that changes absolutely nothing. It is meant to trigger a change in the git update scripts, so that I can start the commit message logging in the autocommit updates larson-group/sys_admin#797", "paths" : [ { "editType" : "edit", "file" : "grid_class.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "math_utilities.F90" ], "commitId" : "fb9b5e177deabcd39ce0cf36b7b1f0fd883f4af6", "timestamp" : 1682273667000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/cernikt", "fullName" : "cernikt" }, "authorEmail" : "tjcernik@uwm.edu", "comment" : "This commit is a commit that changes absolutely nothing. It is meant to trigger a change in the git update scripts, so that I can start the commit message logging in the autocommit updates larson-group/sys_admin#797\u000a", "date" : "2023-04-23 13:14:27 -0500", "id" : "fb9b5e177deabcd39ce0cf36b7b1f0fd883f4af6", "msg" : "This commit is a commit that changes absolutely nothing. It is meant to trigger a change in the git update scripts, so that I can start the commit message logging in the autocommit updates larson-group/sys_admin#797", "paths" : [ { "editType" : "edit", "file" : "math_utilities.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "interpolation.F90" ], "commitId" : "8360118ab54c355ad8a86ed330ade644c4bdcbd8", "timestamp" : 1682278310000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/cernikt", "fullName" : "cernikt" }, "authorEmail" : "tjcernik@uwm.edu", "comment" : "this is another commit that cahnges nothing that will trigger the gitUpdate scripts\u000a", "date" : "2023-04-23 14:31:50 -0500", "id" : "8360118ab54c355ad8a86ed330ade644c4bdcbd8", "msg" : "this is another commit that cahnges nothing that will trigger the gitUpdate scripts", "paths" : [ { "editType" : "edit", "file" : "interpolation.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "clip_explicit.F90" ], "commitId" : "fa866723ef299b5e7c3574bb3f45f38f3fcb07f5", "timestamp" : 1682909659000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/cernikt", "fullName" : "cernikt" }, "authorEmail" : "tjcernik@uwm.edu", "comment" : "adding an update that changes nothing and is just a test for the autoupdate script\u000a", "date" : "2023-04-30 21:54:19 -0500", "id" : "fa866723ef299b5e7c3574bb3f45f38f3fcb07f5", "msg" : "adding an update that changes nothing and is just a test for the autoupdate script", "paths" : [ { "editType" : "edit", "file" : "clip_explicit.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_wp2_wp3_module.F90", "advance_xp2_xpyp_module.F90", "advance_clubb_core_module.F90", "stats_variables.F90", "stats_zm_module.F90", "sfc_varnce_module.F90", "advance_helper_module.F90" ], "commitId" : "e7a5c0ce02567906f9003eb1b1a1cf5ca94bca4c", "timestamp" : 1682952212000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Making CLUBB's splatting scheme implicit and smoother (#1075)\u000a\u000a* Introducing rough implicit splatting scheme into CLUBB. Not yet implicit for wp3.\u000a\u000a* Implementing implicit splatting for wp3.\u000a\u000a* Further improvements to implicit splatting code, including\u000a\u000a- smoothing of the BV freq used for splatting\u000a- adding a new variable 'bv_freq_sqd_splat' to stats\u000a- add the new variable to pyplotgen standard output\u000a\u000aSee PR #1075 and issue #994.\u000a\u000a* Some cleanup.\u000a\u000a* More cleanup, and adding comments.\u000a\u000a* More comments.\u000a\u000a* Updating implicit splatting scheme.\u000a\u000a* Updates to resolve PR requests.\u000a\u000aUpdates associated with implicit splatting will be BIT_CHANGING.\u000a", "date" : "2023-05-01 08:43:32 -0600", "id" : "e7a5c0ce02567906f9003eb1b1a1cf5ca94bca4c", "msg" : "Making CLUBB's splatting scheme implicit and smoother (#1075)", "paths" : [ { "editType" : "edit", "file" : "advance_xp2_xpyp_module.F90" }, { "editType" : "edit", "file" : "stats_variables.F90" }, { "editType" : "edit", "file" : "advance_helper_module.F90" }, { "editType" : "edit", "file" : "advance_wp2_wp3_module.F90" }, { "editType" : "edit", "file" : "sfc_varnce_module.F90" }, { "editType" : "edit", "file" : "advance_clubb_core_module.F90" }, { "editType" : "edit", "file" : "stats_zm_module.F90" } ] }, { "_class" : "hudson.plugins.git.GitChangeSet", "affectedPaths" : [ "advance_clubb_core_module.F90", "sfc_varnce_module.F90", "advance_helper_module.F90" ], "commitId" : "08475cfca3f2571fc6342c8137f1c64d61bd6857", "timestamp" : 1683080989000, "author" : { "absoluteUrl" : "http://carson.math.uwm.edu/jenkins/user/noreply", "fullName" : "noreply" }, "authorEmail" : "noreply@github.com", "comment" : "Calc sfc varnce GPUization (#1081)\u000a\u000a* Initial loop push for calc_sfc_varnce\u000a\u000a* BIT_CHANGING:3b086a40085284aa49c71d32c001d20153a8ddb4 the last commit is bit changing for only some cases and only when using higher than -02 optimization. uf min seems to be the first calculation that starting to differ bitwise. 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