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option with advance_xp2_xpyp.
Cloud fraction needed to be interpolated to momentum levels for
proper use in the code.

Since this code change does not change CLUBB's default configuration,
results are bit-for-bit for the default configuration.
</comment><date>2024-07-19 14:58:44 -0500</date><id>23f82fdc538b5a645dba8762085bfa621791cf47</id><msg>Making a change to the l_C2_cloud_frac option with advance_xp2_xpyp.</msg><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><commitId>9109926fff1ccf00b6495ec70ae57350d85a32ce</commitId><timestamp>1721424813000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Fixing bug. qclvar copying is handled by the api, but we were deleting it with an unstructured data statement. I added this due as a fix before thinking qclvar was a local variable, which happened because I mixed up the CLUBB_CAM and CLUBBND_CAM flags. https://github.com/larson-group/cam/issues/175
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</comment><date>2024-07-31 13:57:28 -0500</date><id>c304d15ab5483f1e7f0b0de1b9f01f06fb7d09b9</id><msg>Fixing GPU bug. There is a vertical dependency with wpxp. This is what was breaking the ECT test, see larson-group/cam#175</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><commitId>32a74a3cbba967b1b3558708ca78d7929dee6d60</commitId><timestamp>1722455629000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Fixing bugs that are only caught when not outputting w_[up/down]_in_cloud stats or if l_host_applies_sfc_fluxes=.true. The l_host_applies_sfc_fluxes=.true. isn't testable (at least not in clubb_standalone), and I just caught that visually. The cloudy_updraft_frac and cloudy_downdraft_frac fields not being set were only noticable in cam, because we always run with iw_up_in_cloud&gt;0 and iw_down_in_cloud&gt;0 to output stats.
</comment><date>2024-07-31 14:53:49 -0500</date><id>32a74a3cbba967b1b3558708ca78d7929dee6d60</id><msg>Fixing bugs that are only caught when not outputting w_[up/down]_in_cloud stats or if l_host_applies_sfc_fluxes=.true. The l_host_applies_sfc_fluxes=.true. isn't testable (at least not in clubb_standalone), and I just caught that visually. The cloudy_updraft_frac and cloudy_downdraft_frac fields not being set were only noticable in cam, because we always run with iw_up_in_cloud&gt;0 and iw_down_in_cloud&gt;0 to output stats.</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>clubb_api_module.F90</affectedPath><commitId>55c6276fbb2a1eb3db01e7b71a7909c22b694d3d</commitId><timestamp>1722465051000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test.
</comment><date>2024-07-31 17:30:51 -0500</date><id>55c6276fbb2a1eb3db01e7b71a7909c22b694d3d</id><msg>Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test.</msg><path><editType>edit</editType><file>clubb_api_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></culprit><inProgress>false</inProgress><nextBuild><number>370</number><url>http://carson.math.uwm.edu/jenkins/view/all/job/e3sm_run_gfortran_test/370/</url></nextBuild><previousBuild><number>368</number><url>http://carson.math.uwm.edu/jenkins/view/all/job/e3sm_run_gfortran_test/368/</url></previousBuild></nextBuild><previousBuild><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><originclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>75</buildNumber><marked><SHA1>c0797a7f204bf6c3e61b5934d30c765329532605</SHA1><branch><SHA1>c0797a7f204bf6c3e61b5934d30c765329532605</SHA1><name>origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>c0797a7f204bf6c3e61b5934d30c765329532605</SHA1><branch><SHA1>c0797a7f204bf6c3e61b5934d30c765329532605</SHA1><name>origin/clubb_silhs_devel</name></branch></revision></originclubb_silhs_devel><originchanges_to_not_break _class='hudson.plugins.git.util.Build'><buildNumber>71</buildNumber><marked><SHA1>2b097205a2cf81c88b1f24a64a493307e06a9f97</SHA1><branch><SHA1>2b097205a2cf81c88b1f24a64a493307e06a9f97</SHA1><name>origin/changes_to_not_break</name></branch></marked><revision><SHA1>2b097205a2cf81c88b1f24a64a493307e06a9f97</SHA1><branch><SHA1>2b097205a2cf81c88b1f24a64a493307e06a9f97</SHA1><name>origin/changes_to_not_break</name></branch></revision></originchanges_to_not_break><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>367</buildNumber><marked><SHA1>2ff840062349e6f41bf60d02587ea404ed5e6df4</SHA1><branch><SHA1>2ff840062349e6f41bf60d02587ea404ed5e6df4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>2ff840062349e6f41bf60d02587ea404ed5e6df4</SHA1><branch><SHA1>2ff840062349e6f41bf60d02587ea404ed5e6df4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>2ff840062349e6f41bf60d02587ea404ed5e6df4</SHA1><branch><SHA1>2ff840062349e6f41bf60d02587ea404ed5e6df4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/e3sm.git</remoteUrl><scmName></scmName></action><action></action><action _class='org.jenkinsci.plugins.workflow.cps.EnvActionImpl'></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#367</displayName><duration>49188</duration><estimatedDuration>3428101</estimatedDuration><fullDisplayName>e3sm_run_gfortran_test #367</fullDisplayName><id>367</id><keepLog>false</keepLog><number>367</number><queueId>896</queueId><result>FAILURE</result><timestamp>1721376248772</timestamp><url>http://carson.math.uwm.edu/jenkins/view/all/job/e3sm_run_gfortran_test/367/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>fd2a66ac11b726371135f2233834e2e87562682c</commitId><timestamp>1721277738000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>In my previous commit, I changed the domain of the maxloc commands
in the computation of k_lh_start to check over the arrays from
levels 2:nz. However, when that happens, the output will be offset
by 1. Consider a situation where the rcm max is at level 2. By being
passed 2 through nz only, maxloc will return a value of 1. I needed
to add +1 to the output to rectify this issue. The results
are BIT_CHANGING.
</comment><date>2024-07-17 23:42:18 -0500</date><id>fd2a66ac11b726371135f2233834e2e87562682c</id><msg>In my previous commit, I changed the domain of the maxloc commands</msg><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>stats_clubb_utilities.F90</affectedPath><affectedPath>precipitation_fraction.F90</affectedPath><commitId>0df67106e4001e1eda48b4740fe1b065df06cd77</commitId><timestamp>1721289115000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>This commit brings the stats output from the all cases run with
the master branch (using the default configuration) in
bit-for-bit agreement with the stats output from all cases run
with the clubb_ghost_exorcism branch. Of course, this agreement
ignores the ghost level output in the zt files run with the
master branch. This commit is technically BIT_CHANGING because
it alters a few stats for a couple cases, but does not change results.
</comment><date>2024-07-18 02:51:55 -0500</date><id>0df67106e4001e1eda48b4740fe1b065df06cd77</id><msg>This commit brings the stats output from the all cases run with</msg><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>precipitation_fraction.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>pdf_closure_module.F90</affectedPath><commitId>3e891b5d456b4ea869955e73e012cdd21813c1d9</commitId><timestamp>1721347695000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Committing a change that will initialize this set of variables
under all circumstances. This change does not affect output
except when the New Hybrid PDF is used. In the case of the
New Hybrid PDF, the variables F_rt, F_thl, F_rt_min, F_rt_max,
F_thl_min, and F_thl_max were never initialized and never set
(they are not part of the New Hybrid PDF -- only in the original
New PDF), resulting NaN values being output to stat files.
</comment><date>2024-07-18 19:08:15 -0500</date><id>3e891b5d456b4ea869955e73e012cdd21813c1d9</id><msg>Committing a change that will initialize this set of variables</msg><path><editType>edit</editType><file>pdf_closure_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>368</number><url>http://carson.math.uwm.edu/jenkins/view/all/job/e3sm_run_gfortran_test/368/</url></nextBuild><previousBuild><number>366</number><url>http://carson.math.uwm.edu/jenkins/view/all/job/e3sm_run_gfortran_test/366/</url></previousBuild></previousBuild></workflowRun>