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_class='hudson.plugins.git.GitChangeSet'><affectedPath>setup_clubb_pdf_params.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><commitId>e3cdb98eb6cc532f8ef187f2d1cc56481a75d1f5</commitId><timestamp>1653690057000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Constructing rcm within SILHS (as rcm_pdf) (#1011)

* Constructing rcm within SILHS (as rcm_pdf) to avoid having to pass rcm directly to SILHS. Relevant to possibly moving PDF call placement
into the "post" position in CAM.

See https://github.com/ESCOMP/CAM/issues/582.

* Reconstructing rcm inside of setup_pdf_parameters instead of passing it through
the argument lists.  Might help NCAR move the PDF call placement to "post" position
in CAM.

See https://github.com/larson-group/clubb/issues/997.

* Adding descriptive comment.
</comment><date>2022-05-27 16:20:57 -0600</date><id>e3cdb98eb6cc532f8ef187f2d1cc56481a75d1f5</id><msg>Constructing rcm within SILHS (as rcm_pdf) (#1011)</msg><path><editType>edit</editType><file>setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>silhs_api_module.F90</affectedPath><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>f6c58abafbfc4b18957f9eedff60deeb321bad32</commitId><timestamp>1653690057000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Constructing rcm within SILHS (as rcm_pdf) (#1011)

* Constructing rcm within SILHS (as rcm_pdf) to avoid having to pass rcm directly to SILHS. Relevant to possibly moving PDF call placement
into the "post" position in CAM.

See https://github.com/ESCOMP/CAM/issues/582.

* Reconstructing rcm inside of setup_pdf_parameters instead of passing it through
the argument lists.  Might help NCAR move the PDF call placement to "post" position
in CAM.

See https://github.com/larson-group/clubb/issues/997.

* Adding descriptive comment.
</comment><date>2022-05-27 16:20:57 -0600</date><id>f6c58abafbfc4b18957f9eedff60deeb321bad32</id><msg>Constructing rcm within SILHS (as rcm_pdf) (#1011)</msg><path><editType>edit</editType><file>silhs_api_module.F90</file></path><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>components/eam/src/physics/cam/subcol_SILHS.F90</affectedPath><commitId>460c6f4aa612051300d03dce1823778ded4e3383</commitId><timestamp>1653690209000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephens</absoluteUrl><fullName>benjamin.andrew.stephens</fullName></author><authorEmail>benjamin.andrew.stephens@gmail.com</authorEmail><comment>Updating for changes to CLUBB.  See https://github.com/larson-group/clubb/commit/e4f125ba067ba8083f917e0e06b6b2398483d3e4.
</comment><date>2022-05-27 17:23:29 -0500</date><id>460c6f4aa612051300d03dce1823778ded4e3383</id><msg>Updating for changes to CLUBB.  See https://github.com/larson-group/clubb/commit/e4f125ba067ba8083f917e0e06b6b2398483d3e4.</msg><path><editType>edit</editType><file>components/eam/src/physics/cam/subcol_SILHS.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephens</absoluteUrl><description></description><fullName>benjamin.andrew.stephens</fullName><id>benjamin.andrew.stephens</id></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName><id>noreply</id></culprit><inProgress>false</inProgress><nextBuild><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action 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_class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>clip_explicit.F90</affectedPath><affectedPath>stats_type_utilities.F90</affectedPath><affectedPath>grid_class.F90</affectedPath><affectedPath>setup_clubb_pdf_params.F90</affectedPath><affectedPath>advance_windm_edsclrm_module.F90</affectedPath><affectedPath>new_pdf_main.F90</affectedPath><affectedPath>advance_helper_module.F90</affectedPath><affectedPath>mono_flux_limiter.F90</affectedPath><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>mixing_length.F90</affectedPath><affectedPath>new_tsdadg_pdf.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>LY93_pdf.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><affectedPath>adg1_adg2_3d_luhar_pdf.F90</affectedPath><affectedPath>new_hybrid_pdf_main.F90</affectedPath><affectedPath>numerical_check.F90</affectedPath><affectedPath>pos_definite_module.F90</affectedPath><affectedPath>new_pdf.F90</affectedPath><affectedPath>sponge_layer_damping.F90</affectedPath><affectedPath>turbulent_adv_pdf.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>advance_xp3_module.F90</affectedPath><affectedPath>fill_holes.F90</affectedPath><affectedPath>stats_clubb_utilities.F90</affectedPath><commitId>db5164bb7ed0c78ce4f06f92e7bf6118d10addf3</commitId><timestamp>1654031468000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Almost final loop pushes (#1012)

* Pushing loop into clip_rcm

* Pushing column loop into trapezoid routines.

* Pushing column loop into clip_covar routines.

* Pushing column loop into clip_variance and clip_skewness.

* Replacing sgn_turbulent_velocity with built in fortran sign

* Removing gr from argument list of stats calls, replacing with just nz

* Replacing some usages of gr with just the number of vertical levels

* Replacing some usages of gr with just the number of vertical levels again

* Missed a couple files to commit

* Pushing some loops and removing need for gr to be passed into some routines.

* Pushing loop into advance_xp3

* Pushing loop into mixing length

* Some more loop pushing

* Pushing some loops into mono_flux limit, skipping the lhs routine since it's a bit tricky at the moment, will do after change to grid class.

* Removing gr from argument list of stats accumulate

* Precalculating zt2zm so that we can use 2d version

* Precalculating um/vm ddzt so that we can use 2d version

* Precalculating things to use 2d version of zt2zm

* Making 2d version of cubic interp for grid class

* Small modifications to sponge damping code argument lists

* Renaming some variables
</comment><date>2022-05-31 16:11:08 -0500</date><id>db5164bb7ed0c78ce4f06f92e7bf6118d10addf3</id><msg>Almost final loop pushes (#1012)</msg><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>advance_xp3_module.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>new_tsdadg_pdf.F90</file></path><path><editType>edit</editType><file>adg1_adg2_3d_luhar_pdf.F90</file></path><path><editType>edit</editType><file>new_pdf.F90</file></path><path><editType>edit</editType><file>LY93_pdf.F90</file></path><path><editType>edit</editType><file>fill_holes.F90</file></path><path><editType>edit</editType><file>sponge_layer_damping.F90</file></path><path><editType>edit</editType><file>advance_helper_module.F90</file></path><path><editType>edit</editType><file>new_pdf_main.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>turbulent_adv_pdf.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>pos_definite_module.F90</file></path><path><editType>edit</editType><file>stats_type_utilities.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>numerical_check.F90</file></path><path><editType>edit</editType><file>grid_class.F90</file></path><path><editType>edit</editType><file>clip_explicit.F90</file></path><path><editType>edit</editType><file>new_hybrid_pdf_main.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>components/eam/src/physics/cam/clubb_intr.F90</affectedPath><commitId>448eb802d2930cd7bc3776ac409ab9cf6be85e51</commitId><timestamp>1654040774000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Making compatible with latest clubb change.
</comment><date>2022-05-31 18:46:14 -0500</date><id>448eb802d2930cd7bc3776ac409ab9cf6be85e51</id><msg>Making compatible with latest clubb change.</msg><path><editType>edit</editType><file>components/eam/src/physics/cam/clubb_intr.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><affectedPath>pdf_parameter_module.F90</affectedPath><affectedPath>new_hybrid_pdf_main.F90</affectedPath><affectedPath>new_pdf_main.F90</affectedPath><commitId>113beb1ec6663fcef3f6bb75c7ee971ab3c0fa45</commitId><timestamp>1654040788000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Making pdf_implicit_coefs_terms a type containing 2D arrays. (#1014)

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Also fixed a small bug.
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