Started by an SCM change547955aa780e3a47b6accf7af68d85f76ad53baff39955aa780e3a47b6accf7af68d85f76ad53baff39refs/remotes/origin/master955aa780e3a47b6accf7af68d85f76ad53baff39955aa780e3a47b6accf7af68d85f76ad53baff39refs/remotes/origin/master955aa780e3a47b6accf7af68d85f76ad53baff39955aa780e3a47b6accf7af68d85f76ad53baff39refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#547637442593717clubb_timestep_gfortran_tests #547547false5475317SUCCESS1782461589329http://carson.math.uwm.edu/jenkins/view/all/job/clubb_timestep_gfortran_tests/547/run_scripts/run_clubb_w_varying_flags.pyjenkins_tests/clubb_restart_silhs_gfortran_test/Jenkinsfilerun_scripts/run_tuner.pyclubb_python_driver/README.mdrun_scripts/time_scm_all.bashtests/test_monoflux_limiter_GPU.pyinput/flag_sets/run_bindiff_w_flags_config_core_flags.jsoninput/flag_sets/run_bindiff_w_flags_config_example.jsonrun_scripts/generate_seed.bashjenkins_tests/clubb_timestep_convergence_gfortran_test/Jenkinsfilerun_scripts/run_scm_loss.pyrun_scripts/run_G_unit_tests.bashclubb_jax/JAX_CONVERSION_PLAN.mdjenkins_tests/clubb_monoflux_CPU_vs_GPU_diff/Jenkinsfilesrc/generalized_grid_test.F90run_scripts/create_case_namelist.pyrun_scripts/ensemble_run/ensembles/.gitignoretuner/paths.pytests/run_thread_test.pyjenkins_tests/clubb_generalized_vertical_grid_test/Jenkinsfilerun_scripts/run_scm.bashrun_scripts/check_budget_balance.pyjenkins_tests/clubb_restart_gfortran_test/Jenkinsfilerun_scripts/run_scm_collect_suite.bashclubb_jax/README.mdjenkins_tests/clubb_nvhpc_gpu_column_mirror_test/Jenkinsfilerun_scripts/run_scm_collect.bashrun_scripts/run_silhs_test.bashtests/run_restart_test.pytests/run_loss_output_consistency.pyrun_scripts/ensemble_run/create_output.bashrun_scripts/run_bindiff_w_flags_config_core_flags.jsontuner/test_tuning_strategy.pyrun_scripts/run_scm_debug.bashrun_scripts/test_fatal_error_handling.bashrun_scripts/run_stats_output_consistency.pyrun_scripts/run_python_vs_fortran_cases.pytests/run_benchmark_converter_test.pyrun_scripts/run_bindiff_w_flags.pyrun_scripts/run_clubb_and_pyplotgen.pyrun_scripts/run_clubb_conv_test.bashtests/run_stats_output_consistency.pyjenkins_tests/clubb_silhs_convergence_gfortran/Jenkinsfilejenkins_tests/clubb_stats_output_consistency_gfortran_test/Jenkinsfilerun_scripts/run_G_unit_tests.pyjenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfilejenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfilesrc/clubb_driver.F90run_scripts/test_fatal_error_handling.pyREADMEtuner/README.mdrun_scripts/run_silhs_test.pypostprocessing/timestep_convergence_test.bashtests/test_fatal_error_handling.pyjenkins_tests/clubb_G_unit_gfortran_tests/Jenkinsfilejenkins_tests/clubb_cmake_output_matching/Jenkinsfiletests/run_timestep_tests.pytests/run_clubb_conv_test.pyrun_scripts/run_bindiff_all.bashpostprocessing/latin_hypercube_plotting/variance_analysis_scripts/rms_vs_sample_points/silhs_varying_sp_output.shtests/check_budget_balance.pyrun_scripts/ensemble_run/READMErun_scripts/ensemble_run/ensemble_run.bashrun_scripts/ensemble_run/submission/.gitignorerun_scripts/READMEjenkins_tests/clubb_openmp_gfortran_test/Jenkinsfileutilities/create_case_namelist.pyrun_scripts/run_benchmark_converter_test.pytests/run_jax_vs_fortran_cases.pytests/READMEtests/test_fire_tuner.pytuner/tuning_worker.pyrun_scripts/run_scm_all.bashjenkins_tests/clubb_python_test/Jenkinsfilerun_scripts/run_bindiff_w_flags_config_host_flags.jsontests/check_mirrored_multi_col_output.pyrun_scripts/run_bindiff_w_flags_requirements.txtrun_scripts/run_loss_output_consistency.pyrun_scripts/create_multi_col_params.pyjenkins_tests/clubb_generalized_vert_grid_host_flags/Jenkinsfiletests/run_G_unit_tests.pyrun_scripts/fire_tuner.pypostprocessing/pyplotgen/pyplotgen.pysrc/int2txt.F90tests/run_python_vs_fortran_cases.pyrun_scripts/run_bindiff_w_flags_config_example.jsonrun_scripts/run_clubb_conv_test.pyrun_scripts/run_thread_test.bashrun_scripts/fill_holes.pyrun_scripts/ensemble_run/input/.gitignorerun_scripts/check_mirrored_multi_col_output.pyrun_scripts/RUN_CASESjenkins_tests/clubb_fire_tuning_gfortran_test/Jenkinsfiletests/run_bindiff_w_flags.pyrun_scripts/run_clubb_and_pyplotgen.bashjenkins_tests/run_bindiff_w_varying_flags_against_master/Jenkinsfilejenkins_tests/clubb_G_unit_reverse_dir_grid_test/Jenkinsfilerun_scripts/run_timestep_tests.bashinput/flag_sets/run_bindiff_w_flags_config_host_flags.jsonjenkins_tests/clubb_uninit_var_oracle_test/Jenkinsfilejenkins_tests/clubb_check_budget_balance_gfortran/Jenkinsfilerun_scripts/run_timestep_tests.pyjenkins_tests/clubb_timestep_gfortran_tests/Jenkinsfilerun_scripts/ensemble_run/output/.gitignorerun_scripts/run_tuner.bashLLM_prompts/update_python_api_and_drivers.mdtests/run_silhs_test.pyrun_scripts/diff_netcdf_outputs.pydash_app/fill_holes.pyrun_scripts/run_jax_vs_fortran_cases.pyrun_scripts/run_restart_test.pyrun_scripts/ensemble_run/ensemble_setup.bashrun_scripts/run_bindiff_varying_flags_output.pyrun_scripts/run_scm.pyrun_scripts/run_bindiff_all.pyutilities/create_multi_col_params.pyrun_scripts/run_thread_test.pyrun_scripts/test_monoflux_limiter_GPU.pysrc/CMakeLists.txtsrc/error.F90run_scripts/check_multi_col_error.pye04956358685c2869358db8b6d46d16cf9744b031782439617000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comCleaning up run_scripts (#1320) * Cleaning up run_scripts by removing old bash files, also moving many scripts into a new tests/ directory, since those are tests. Fixing a small bug in clubb_driver as well, just needed to move a print statement, otherwise it tries writing to a closed file. * A little cleanup and better READMEs for run_scripts and tests 2026-06-25 21:06:57 -0500e04956358685c2869358db8b6d46d16cf9744b03Cleaning up run_scripts (#1320)deleterun_scripts/run_scm_all.bashdeleterun_scripts/run_thread_test.pydeleterun_scripts/ensemble_run/input/.gitignoreeditjenkins_tests/clubb_monoflux_CPU_vs_GPU_diff/Jenkinsfiledeleterun_scripts/run_timestep_tests.bashdeleterun_scripts/check_mirrored_multi_col_output.pyaddrun_scripts/run_clubb_and_pyplotgen.pyeditrun_scripts/run_scm_loss.pyeditrun_scripts/READMEaddtests/READMEeditjenkins_tests/clubb_generalized_vertical_grid_test/Jenkinsfiledeleterun_scripts/run_scm_collect.basheditpostprocessing/pyplotgen/pyplotgen.pyeditsrc/error.F90deleterun_scripts/run_timestep_tests.pyeditsrc/clubb_driver.F90addtests/test_fatal_error_handling.pydeleterun_scripts/test_fatal_error_handling.bashaddtests/run_silhs_test.pydeleterun_scripts/run_scm_debug.basheditjenkins_tests/clubb_python_test/Jenkinsfileeditrun_scripts/run_clubb_w_varying_flags.pydeleterun_scripts/check_budget_balance.pyeditpostprocessing/latin_hypercube_plotting/variance_analysis_scripts/rms_vs_sample_points/silhs_varying_sp_output.shdeleterun_scripts/ensemble_run/ensembles/.gitignoredeleterun_scripts/run_bindiff_w_flags_requirements.txtdeleterun_scripts/run_python_vs_fortran_cases.pydeleterun_scripts/fire_tuner.pydeleterun_scripts/run_G_unit_tests.bashdeletejenkins_tests/clubb_uninit_var_oracle_test/Jenkinsfileaddtests/test_fire_tuner.pydeleterun_scripts/run_bindiff_w_flags_config_core_flags.jsondeleterun_scripts/generate_seed.bashaddutilities/create_case_namelist.pyeditjenkins_tests/clubb_G_unit_gfortran_tests/Jenkinsfileeditjenkins_tests/clubb_generalized_vert_grid_host_flags/Jenkinsfileaddtests/check_mirrored_multi_col_output.pyaddtests/run_loss_output_consistency.pyeditREADMEeditjenkins_tests/clubb_openmp_gfortran_test/Jenkinsfiledeleterun_scripts/ensemble_run/create_output.basheditrun_scripts/run_scm.pyaddtests/run_python_vs_fortran_cases.pyaddtests/run_bindiff_w_flags.pydeleterun_scripts/run_clubb_and_pyplotgen.bashdeleterun_scripts/run_stats_output_consistency.pyeditjenkins_tests/clubb_G_unit_reverse_dir_grid_test/Jenkinsfiledeleterun_scripts/run_scm_collect_suite.bashaddtests/run_thread_test.pyaddtests/run_jax_vs_fortran_cases.pydeleterun_scripts/run_bindiff_w_flags_config_host_flags.jsondeleterun_scripts/time_scm_all.bashaddtests/run_timestep_tests.pyaddtests/check_budget_balance.pyeditrun_scripts/run_bindiff_all.pydeleterun_scripts/run_jax_vs_fortran_cases.pydeleterun_scripts/test_monoflux_limiter_GPU.pyeditjenkins_tests/clubb_stats_output_consistency_gfortran_test/Jenkinsfiledeleterun_scripts/test_fatal_error_handling.pydeleterun_scripts/ensemble_run/READMEeditjenkins_tests/clubb_restart_silhs_gfortran_test/Jenkinsfiledeleterun_scripts/check_multi_col_error.pyaddinput/flag_sets/run_bindiff_w_flags_config_core_flags.jsonaddtests/run_clubb_conv_test.pyeditclubb_python_driver/README.mddeleterun_scripts/fill_holes.pyeditjenkins_tests/clubb_silhs_convergence_gfortran/Jenkinsfiledeleterun_scripts/ensemble_run/ensemble_run.bashedittuner/tuning_worker.pyaddinput/flag_sets/run_bindiff_w_flags_config_host_flags.jsoneditsrc/CMakeLists.txtaddtests/run_benchmark_converter_test.pyeditjenkins_tests/clubb_check_budget_balance_gfortran/Jenkinsfileeditjenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfileaddtests/run_stats_output_consistency.pydeletejenkins_tests/clubb_cmake_output_matching/Jenkinsfiledeleterun_scripts/ensemble_run/submission/.gitignoredeleterun_scripts/run_silhs_test.bashaddtests/run_restart_test.pyeditjenkins_tests/clubb_timestep_convergence_gfortran_test/Jenkinsfiledeleterun_scripts/ensemble_run/output/.gitignoredeleterun_scripts/run_tuner.bashdeleterun_scripts/run_thread_test.bashaddutilities/create_multi_col_params.pyaddinput/flag_sets/run_bindiff_w_flags_config_example.jsoneditclubb_jax/README.mddeleterun_scripts/run_bindiff_varying_flags_output.pydeleterun_scripts/run_loss_output_consistency.pydeleterun_scripts/run_bindiff_w_flags_config_example.jsondeleterun_scripts/run_bindiff_w_flags.pyeditpostprocessing/timestep_convergence_test.bashdeleterun_scripts/run_silhs_test.pyeditjenkins_tests/clubb_restart_gfortran_test/Jenkinsfiledeleterun_scripts/diff_netcdf_outputs.pyadddash_app/fill_holes.pyedittuner/test_tuning_strategy.pyedittuner/README.mddeleterun_scripts/create_case_namelist.pyeditclubb_jax/JAX_CONVERSION_PLAN.mdeditjenkins_tests/clubb_timestep_gfortran_tests/Jenkinsfileeditjenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfileeditjenkins_tests/run_bindiff_w_varying_flags_against_master/Jenkinsfiledeleterun_scripts/RUN_CASESdeleterun_scripts/run_bindiff_all.bashaddtests/run_G_unit_tests.pyeditjenkins_tests/clubb_nvhpc_gpu_column_mirror_test/Jenkinsfiledeleterun_scripts/create_multi_col_params.pyeditsrc/generalized_grid_test.F90editjenkins_tests/clubb_fire_tuning_gfortran_test/Jenkinsfiledeleterun_scripts/run_restart_test.pydeleterun_scripts/run_clubb_conv_test.pydeleterun_scripts/run_scm.basheditLLM_prompts/update_python_api_and_drivers.mddeletesrc/int2txt.F90deleterun_scripts/run_clubb_conv_test.bashdeleterun_scripts/run_benchmark_converter_test.pyedittuner/paths.pydeleterun_scripts/run_G_unit_tests.pyeditrun_scripts/run_tuner.pydeleterun_scripts/ensemble_run/ensemble_setup.bashaddtests/test_monoflux_limiter_GPU.pysrc/CMakeLists.txtrun_scripts/READMEsrc/jacobian.F90READMEinput_misc/jacobian.inrun_scripts/run_jacobian.bash5512bff0caa1b179b2a03a5512fc3de2c866b0cb1782441296000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving jacobian code - it has not worked in a long time 2026-06-25 21:34:56 -05005512bff0caa1b179b2a03a5512fc3de2c866b0cbRemoving jacobian code - it has not worked in a long timeeditsrc/CMakeLists.txteditREADMEdeletesrc/jacobian.F90deleteinput_misc/jacobian.indeleterun_scripts/run_jacobian.basheditrun_scripts/READMEsrc/Input_fields/recl.ince1ca53920f7095d09c5dde5b9502f4056c481b481782441838000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving recl.inc, just dead code for an outdated issue 2026-06-25 21:43:58 -0500e1ca53920f7095d09c5dde5b9502f4056c481b48Removing recl.inc, just dead code for an outdated issuedeletesrc/Input_fields/recl.incsrc/CLUBB_core/lapack_wrap.F900ed15803474cd7d3d8228a642e9e2599a840707d1782442179000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving ifdefs that are only for E3SM and only on a specific machine 2026-06-25 21:49:39 -05000ed15803474cd7d3d8228a642e9e2599a840707dRemoving ifdefs that are only for E3SM and only on a specific machineeditsrc/CLUBB_core/lapack_wrap.F90src/CLUBB_core/advance_clubb_core_module.F90src/generalized_grid_test.F90src/CLUBB_core/clubb_api_module.F90src/CLUBB_core/mixing_length.F9086f7a6081cc525e6d953cebc42d4e5962d7e24f21782443428000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving the CLUBBND_CAM option, not sure what it was for, it's not defined in this repo or any of our host model repos 2026-06-25 22:10:28 -050086f7a6081cc525e6d953cebc42d4e5962d7e24f2Removing the CLUBBND_CAM option, not sure what it was for, it's not defined in this repo or any of our host model reposeditsrc/CLUBB_core/clubb_api_module.F90editsrc/generalized_grid_test.F90editsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/CLUBB_core/mixing_length.F90src/generalized_grid_test.F90src/CLUBB_core/pdf_closure_module.F90clubb_python_api/f2py_fortran_wrappers/pdf_closure_module_wrapper.F90src/Input_fields/input_fields.F90clubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyclubb_python_api/tests/test_call_tree_pdf_closure_driver.pysrc/Microphys/pdf_hydromet_microphys_wrapper.F90src/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/advance_windm_edsclrm_module.F90src/clubb_driver.F90clubb_python_driver/advance_clubb_core.pyclubb_python_api/f2py_fortran_wrappers/advance_windm_edsclrm_module_wrapper.F90clubb_python_api/clubb_f2py.pyfclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyclubb_python_api/clubb_python/CLUBB_core/advance_windm_edsclrm.py955aa780e3a47b6accf7af68d85f76ad53baff391782445585000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving unused variables 2026-06-25 22:46:25 -0500955aa780e3a47b6accf7af68d85f76ad53baff39Removing unused variableseditclubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyeditsrc/generalized_grid_test.F90editclubb_python_api/clubb_python/CLUBB_core/advance_windm_edsclrm.pyeditclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyeditsrc/Input_fields/input_fields.F90editclubb_python_api/f2py_fortran_wrappers/advance_windm_edsclrm_module_wrapper.F90editsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/CLUBB_core/pdf_closure_module.F90editclubb_python_api/f2py_fortran_wrappers/pdf_closure_module_wrapper.F90editclubb_python_api/tests/test_call_tree_pdf_closure_driver.pyeditclubb_python_driver/advance_clubb_core.pyeditsrc/clubb_driver.F90editsrc/Microphys/pdf_hydromet_microphys_wrapper.F90editsrc/CLUBB_core/advance_windm_edsclrm_module.F90editclubb_python_api/clubb_f2py.pyfgithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse546http://carson.math.uwm.edu/jenkins/view/all/job/clubb_timestep_gfortran_tests/546/