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dash updates (#1327)

* Cross-platform updates to help with running on Macs mainly. The biggest difference is that now our code expects the les data in input/, and I've added a symlink that points to the normal pub directory for it. This makes everything work the same, but also makes it so someone can download the les data and store it anywhere, then just change the symlink.

* Little UI improvements

* Small UI fix

* Small fix needed for a different python version and a little UI update

* Another tiny cross platform fix

* Updating build removal method and adding a mac specific bit for GPTL compiling that fixes environment issues

* Removing accidentally added file
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</comment><date>2026-07-06 13:24:28 -0500</date><id>0b2206b6fec8e02c7539b444e1ac3b9aabb04ac5</id><msg>Remove old SVN version control identifier ($Id$) from tunable_parameters.in</msg><path><editType>edit</editType><file>input/parameter_and_flag_configs/default/tunable_parameters.in</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>input/parameter_and_flag_configs/compatible_r8029/tunable_parameters.in</affectedPath><commitId>1ebd57b3c3499139dc2d3424417ecd9edbf31e11</commitId><timestamp>1783362399000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Remove old SVN version control identifier from compatible_r8029/tunable_parameters.in

Removed the version control identifier from the file.
</comment><date>2026-07-06 13:26:39 -0500</date><id>1ebd57b3c3499139dc2d3424417ecd9edbf31e11</id><msg>Remove old SVN version control identifier from compatible_r8029/tunable_parameters.in</msg><path><editType>edit</editType><file>input/parameter_and_flag_configs/compatible_r8029/tunable_parameters.in</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/CMakeLists.txt</affectedPath><commitId>15e88d15a1d7fa8d7ab5761e084ebc1874e0bf29</commitId><timestamp>1783372173000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Remove blank line to test git update scripts
</comment><date>2026-07-06 16:09:33 -0500</date><id>15e88d15a1d7fa8d7ab5761e084ebc1874e0bf29</id><msg>Remove blank line to test git update scripts</msg><path><editType>edit</editType><file>src/CLUBB_core/CMakeLists.txt</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/generalized_grid_test.F90</affectedPath><affectedPath>dash_app/compile_tab/runtime.py</affectedPath><affectedPath>cmake/deps/GPTLDependency.cmake</affectedPath><affectedPath>src/CLUBB_core/stats_netcdf.F90</affectedPath><affectedPath>src/Microphys/pdf_hydromet_microphys_wrapper.F90</affectedPath><affectedPath>src/CLUBB_core/code_timer_module.F90</affectedPath><affectedPath>run_scripts/run_scm.py</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>clubb_python_api/run_pytests.sh</affectedPath><affectedPath>src/CLUBB_core/CMakeLists.txt</affectedPath><affectedPath>README</affectedPath><affectedPath>dash_app/DEVELOPMENT.md</affectedPath><affectedPath>src/CMakeLists.txt</affectedPath><affectedPath>dash_app/run_tab/callbacks_runs.py</affectedPath><affectedPath>cmake/toolchains/linux_x86_64_nvhpc.cmake</affectedPath><affectedPath>clubb_python_api/CMakeLists.txt</affectedPath><affectedPath>compile.py</affectedPath><commitId>d2415bd01044655b03328e22070af55f99511a59</commitId><timestamp>1783400577000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb timer upgrade (#1328)

* Upgrading CLUBBs timer system. Now we either can use gptl just by compiling with it, or we use a cpu_time based fallback that was designed to be a crude copy

* Giving up on using the build system to detect stale build, switching to a method that just compares timestamps on directories

* Fixing small UI bug and removing a bit of dead code in the dash app, also fixing a gptl compiling issue on mac

* Little fix for python

* Adding a bit about the new timing output in the output section of the README

* Improving print statements and disabling timing and iteration prints when debug=-1

---------

Co-authored-by: Gunther Huebler &lt;guntherhuebler@frankie.uits.uwm.edu&gt;
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additions (#1324)

* Starting new additions for tuner - specifically an overall history of all samples and loss metrics with the eventual goal of having fancy SVD and spline things we can do with that

* Adding plots to tune tab to visualize data in the overall sample outputs

* Adding the enhanced simulated annealed to the tuner. Only real tweak it that it runs workers x batch_size chains independently so that we can utilize the CPU fully

* Filtering big values in parameter plot view and making default window length 3600s (1 hour)

* Bug fix to metric report - a 0 correlation was able to throw things off, which could occur when a field from either result (clubb or LES) is all 0 without the other one being all zero. Also some small display improvements

* Adding sensitivity plots

* Updating flag/param selecting method by created a general input/tunable_parameters directory that contains subdirectories for different flag set combos. These can be used by passing in their name to run_scm.py with -config. Also updating references to these files since they moved and also making tests and scripts default to using -override instead of editting files with sed.

* Adding buttons to select param/flag config in the tuner

* Quality of life improvements for plot tab - now view settings and UI settings are retained when reloading the same case

* Fixing missed comment change

* Various small UI improvements

* Improving tuner history check and little UI fix in run_tab

* Fixing tuner environment setup

* Fixing little netcdf version issue and adding new test for loss metrics consistency check

* Renaming tunable_parameters to parameter_and_flag_configs, also adding -config example to run_scripts README
</comment><date>2026-07-02 23:06:14 -0500</date><id>95d5d12aef49035170773f0714a97f4109bcccdd</id><msg>Tuner additions 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