Started by an SCM change75103b65d48c57146ed63a900c901fa0f0f62aefb7103b65d48c57146ed63a900c901fa0f0f62aefb7refs/remotes/origin/master103b65d48c57146ed63a900c901fa0f0f62aefb7103b65d48c57146ed63a900c901fa0f0f62aefb7refs/remotes/origin/master103b65d48c57146ed63a900c901fa0f0f62aefb7103b65d48c57146ed63a900c901fa0f0f62aefb7refs/remotes/origin/masterhttps://github.com/larson-group/clubb.githttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_release_diff_test/detail/clubb_release_diff_test/75/artifactshttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_release_diff_test/detail/clubb_release_diff_test/75/changeshttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_release_diff_test/detail/clubb_release_diff_test/75/http://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_release_diff_test/detail/clubb_release_diff_test/75/testsfalseCheckout Clubb and Clubb_ReleaseDifffalse#7531297341419302clubb_release_diff_test #7575false754417SUCCESS1620808568910http://carson.math.uwm.edu/jenkins/view/all/job/clubb_release_diff_test/75/src/CLUBB_core/stats_zt_module.F90src/CLUBB_core/advance_wp2_wp3_module.F90input/stats/standard_stats.inpostprocessing/pyplotgen/config/VariableGroupBaseBudgets.pysrc/CLUBB_core/stats_variables.F903523145a4f3c69d90f797ac315a808b0607df8af1620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comAdding some new code that puts the diffusion term d(wp2*em)/dz into a new function, creates a new wp3 budget term (wp3_pr_dfsn), and adds that new budget term to pyplotgen. 2021-05-11 08:33:03 -05003523145a4f3c69d90f797ac315a808b0607df8afAdding some new code that puts the diffusion term d(wp2*em)/dz into a new function, creates a new wp3 budget term (wp3_pr_dfsn), and adds that new budget term to pyplotgen.editsrc/CLUBB_core/advance_wp2_wp3_module.F90editinput/stats/standard_stats.ineditsrc/CLUBB_core/stats_zt_module.F90editsrc/CLUBB_core/stats_variables.F90editpostprocessing/pyplotgen/config/VariableGroupBaseBudgets.pyinput/tunable_parameters/tunable_parameters.insrc/CLUBB_core/advance_wp2_wp3_module.F90src/CLUBB_core/parameters_tunable.F90src/CLUBB_core/parameter_indices.F90src/CLUBB_core/clubb_api_module.F90d1363bca96e31f5a0b7d41079d395ff96c2f4e341620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comAdding new coefficient to control the wp3 pressure diffusion term. 2021-05-11 08:33:03 -0500d1363bca96e31f5a0b7d41079d395ff96c2f4e34Adding new coefficient to control the wp3 pressure diffusion term.editsrc/CLUBB_core/parameter_indices.F90editsrc/CLUBB_core/advance_wp2_wp3_module.F90editinput/tunable_parameters/tunable_parameters.ineditsrc/CLUBB_core/parameters_tunable.F90editsrc/CLUBB_core/clubb_api_module.F90src/CLUBB_core/advance_wp2_wp3_module.F90ea19b31abbaec274e1b215720886306879bf52091620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comSome minor updates to advance_wp2_wp3 relevant to the pr_turb and pr_dfsn terms. 2021-05-11 08:33:03 -0500ea19b31abbaec274e1b215720886306879bf5209Some minor updates to advance_wp2_wp3 relevant to the pr_turb and pr_dfsn terms.editsrc/CLUBB_core/advance_wp2_wp3_module.F90src/CLUBB_core/advance_wp2_wp3_module.F90src/CLUBB_core/stats_clubb_utilities.F90513df8d73c415cf3b4f24681e7ca304dd26323ed1620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comConverting em*d(em)/dz to d(em^2)/dz in the wp3_pr_turb term and fixing a typo. 2021-05-11 08:33:03 -0500513df8d73c415cf3b4f24681e7ca304dd26323edConverting em*d(em)/dz to d(em^2)/dz in the wp3_pr_turb term and fixing a typo.editsrc/CLUBB_core/advance_wp2_wp3_module.F90editsrc/CLUBB_core/stats_clubb_utilities.F90input_misc/tuner/error_atex.insrc/CLUBB_core/advance_wp2_wp3_module.F90input_misc/tuner/error_rico.ininput_misc/tuner/error_gabls3_night.ininput_misc/tuner/error_nov11_altocu.ininput_misc/tuner/error_dycoms2_rf01.ininput_misc/tuner/error_dycoms2_rf02_ds.ininput_misc/tuner/error_wangara.ininput/tunable_parameters_compatible_r8029/tunable_parameters.ininput_misc/tuner/error_dycoms2_rf02_do.insrc/CLUBB_core/parameter_indices.F90input_misc/tuner/error_dycoms2_rf02_nd.ininput/tunable_parameters_e3sm/tunable_parameters.ininput_misc/tuner/error_arm.insrc/CLUBB_core/parameters_tunable.F90input_misc/tuner/error_bomex.inens_tune/error_combined_001.ininput/tunable_parameters_Lscale/tunable_parameters.ininput_misc/tuner/error_all.ininput_misc/tuner/error_arm_97.ininput_misc/tuner/error_lba.insrc/CLUBB_core/clubb_api_module.F90input_misc/tuner/error_fire.ininput_misc/tuner/error_gabls2.ininput_misc/tuner/error_ticket_756.inc5e4581bd53f4a9f561de1819263d426095583d51620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comRenaming C_wp3_turb --> C_wp3_pr_turb (BIT_CHANGING due to name change in netcdf output). See #884. 2021-05-11 08:33:03 -0500c5e4581bd53f4a9f561de1819263d426095583d5Renaming C_wp3_turb --> C_wp3_pr_turb (BIT_CHANGING due to name change in netcdf output).editinput_misc/tuner/error_all.ineditinput_misc/tuner/error_dycoms2_rf02_nd.ineditinput_misc/tuner/error_bomex.ineditsrc/CLUBB_core/clubb_api_module.F90editinput_misc/tuner/error_arm_97.ineditinput_misc/tuner/error_dycoms2_rf01.ineditinput_misc/tuner/error_atex.ineditinput_misc/tuner/error_rico.ineditinput_misc/tuner/error_arm.ineditinput_misc/tuner/error_ticket_756.ineditinput_misc/tuner/error_lba.ineditsrc/CLUBB_core/advance_wp2_wp3_module.F90editinput_misc/tuner/error_gabls3_night.ineditsrc/CLUBB_core/parameter_indices.F90editinput_misc/tuner/error_dycoms2_rf02_do.ineditinput/tunable_parameters_Lscale/tunable_parameters.ineditinput/tunable_parameters_compatible_r8029/tunable_parameters.ineditinput_misc/tuner/error_dycoms2_rf02_ds.ineditinput_misc/tuner/error_wangara.ineditinput/tunable_parameters_e3sm/tunable_parameters.ineditinput_misc/tuner/error_gabls2.ineditinput_misc/tuner/error_nov11_altocu.ineditsrc/CLUBB_core/parameters_tunable.F90editens_tune/error_combined_001.ineditinput_misc/tuner/error_fire.ininput/tunable_parameters_e3sm/tunable_parameters.ininput/tunable_parameters_Lscale/tunable_parameters.in40e9f58f8a9918412ab5402cf593e2fd3663e1711620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comResetting C_wp3_pr_dfsn constant to zero in two tunable_parameters.in files since it was set to 0.1 by mistake. 2021-05-11 08:33:03 -050040e9f58f8a9918412ab5402cf593e2fd3663e171Resetting C_wp3_pr_dfsn constant to zero in two tunable_parameters.in files since it was set to 0.1 by mistake.editinput/tunable_parameters_Lscale/tunable_parameters.ineditinput/tunable_parameters_e3sm/tunable_parameters.inpostprocessing/pyplotgen/config/VariableGroupBaseBudgets.py59f21059cf78c77a1d223b5f87217806cd25f61a1620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comPyplotgen update: Adding wp3_pr_dfsn to the residual calculation in pyplotgen to get the residual line correct. 2021-05-11 08:33:03 -050059f21059cf78c77a1d223b5f87217806cd25f61aPyplotgen update:editpostprocessing/pyplotgen/config/VariableGroupBaseBudgets.pysrc/CLUBB_core/advance_clubb_core_module.F90postprocessing/pyplotgen/config/VariableGroupWs.pysrc/CLUBB_core/advance_wp2_wp3_module.F90input/stats/standard_stats.insrc/CLUBB_core/pdf_closure_module.F90src/CLUBB_core/stats_clubb_utilities.F90input/tunable_parameters/tunable_parameters.insrc/CLUBB_core/stats_variables.F90src/CLUBB_core/stats_zm_module.F909a63bd645bd0dfedb18f7a3ab7d13c99d7883acc1620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comThese changes add the new fourth-order moment variables wp2up2 and wp2vp2 to the CLUBB code. This requires a new function in pdf_closure_module since they must be calculated separately with a new formula, and they are fed through into advance_wp2_wp3 for use with the pr_dfsn subroutine. They are also added to the standard stats file and will be output to netcdf, hence this commit is BIT_CHANGING. The new variables are also added to pyplotgen as part of VariableGroupWs.py where wp4 is found. See #920. 2021-05-11 08:33:03 -05009a63bd645bd0dfedb18f7a3ab7d13c99d7883accThese changes add the new fourth-order moment variables wp2up2 and wp2vp2 to the CLUBB code. This requires a new function in pdf_closure_module since they must be calculated separately with a new formula, and they are fed through into advance_wp2_wp3 for use with the pr_dfsn subroutine. They are also added to the standard stats file and will be output to netcdf, hence this commit is BIT_CHANGING.editsrc/CLUBB_core/stats_variables.F90editsrc/CLUBB_core/stats_zm_module.F90editsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/CLUBB_core/advance_wp2_wp3_module.F90editinput/stats/standard_stats.ineditsrc/CLUBB_core/pdf_closure_module.F90editsrc/CLUBB_core/stats_clubb_utilities.F90editpostprocessing/pyplotgen/config/VariableGroupWs.pyeditinput/tunable_parameters/tunable_parameters.ininput/tunable_parameters_e3sm/tunable_parameters.ininput/tunable_parameters_Lscale/tunable_parameters.ininput/tunable_parameters_compatible_r8029/tunable_parameters.in6e1d9b030b0cffbfb07d8ef15555bcd8830a292d1620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comRenaming parameter C_wp3_turb-->C_wp3_pr_turb in the alternative tunable_parameters files. 2021-05-11 08:33:03 -05006e1d9b030b0cffbfb07d8ef15555bcd8830a292dRenaming parameter C_wp3_turb-->C_wp3_pr_turb in the alternative tunable_parameters files.editinput/tunable_parameters_compatible_r8029/tunable_parameters.ineditinput/tunable_parameters_Lscale/tunable_parameters.ineditinput/tunable_parameters_e3sm/tunable_parameters.insrc/CLUBB_core/advance_wp2_wp3_module.F909864f9b0f22913646bbb36963a5742d370dbc4771620739983000http://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82@users.noreply.github.comPutting the wp3_pr_turb formulation back to its d(rho*wp2*em)/dz form. This would be a BIT_CHANGING commit since it would change the answers for the pr_turb term. However once this branch is merged into the master branch, results should be bit-for-bit since this term was only modified in the alternate branch. See #920. 2021-05-11 08:33:03 -05009864f9b0f22913646bbb36963a5742d370dbc477Putting the wp3_pr_turb formulation back to its d(rho*wp2*em)/dz form. This would be a BIT_CHANGING commit since it would change the answers for the pr_turb term. However once this branch is merged into the master branch, results should be bit-for-bit since this term was only modified in the alternate branch.editsrc/CLUBB_core/advance_wp2_wp3_module.F90postprocessing/pyplotgen/config/VariableGroupBaseBudgetsSamStyle.pya922aca2d6add3f9a080aa4a542d793a8fe9b8dd1620745084000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comPyplotgen updates: adding new wp3_pr_dfsn term to SAM style budgets. See #895 and #920. 2021-05-11 09:58:04 -0500a922aca2d6add3f9a080aa4a542d793a8fe9b8ddPyplotgen updates: adding new wp3_pr_dfsn term to SAM style budgets.editpostprocessing/pyplotgen/config/VariableGroupBaseBudgetsSamStyle.pysrc/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/calc_pressure.F90src/CLUBB_core/advance_windm_edsclrm_module.F90src/CLUBB_core/interpolation.F90src/CLUBB_core/advance_helper_module.F90src/CLUBB_core/stats_type_utilities.F90103b65d48c57146ed63a900c901fa0f0f62aefb71620766665000http://carson.math.uwm.edu/jenkins/user/rhodeskrhodeskrhodesk@uwm.eduAdded intent comments for the following files: advance_clubb_core_module, advance_helper_module, and advance_windm_edsclrm_module. These changes are BFB. For ticket #924. 2021-05-11 15:57:45 -0500103b65d48c57146ed63a900c901fa0f0f62aefb7Added intent comments for the following files:editsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/CLUBB_core/interpolation.F90editsrc/CLUBB_core/advance_windm_edsclrm_module.F90editsrc/CLUBB_core/calc_pressure.F90editsrc/CLUBB_core/stats_type_utilities.F90editsrc/CLUBB_core/advance_helper_module.F90githttp://carson.math.uwm.edu/jenkins/user/rhodeskrhodeskrhodeskhttp://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephenshttp://carson.math.uwm.edu/jenkins/user/59519056+bstephens8259519056+bstephens8259519056+bstephens82falseStarted by an SCM change760e8ed5d48b7be5f98b78abc60c44627a5c8cf0500e8ed5d48b7be5f98b78abc60c44627a5c8cf050refs/remotes/origin/master0e8ed5d48b7be5f98b78abc60c44627a5c8cf0500e8ed5d48b7be5f98b78abc60c44627a5c8cf050refs/remotes/origin/master0e8ed5d48b7be5f98b78abc60c44627a5c8cf0500e8ed5d48b7be5f98b78abc60c44627a5c8cf050refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#7632682291419302clubb_release_diff_test #7676false764476SUCCESS1620894967968http://carson.math.uwm.edu/jenkins/view/all/job/clubb_release_diff_test/76/jenkins_tests/uninit_var_test/Jenkinsfilejenkins_tests/unit_var_test/Jenkinsfile59079784973fd15013ece64a894b6ddea7f46cf51620854704000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comRenamed unit_var_test --> uninit_var_test to reflect the purpose of the test. 2021-05-12 16:25:04 -050059079784973fd15013ece64a894b6ddea7f46cf5Renamed unit_var_test --> uninit_var_test to reflect the purpose of the test.deletejenkins_tests/unit_var_test/Jenkinsfileaddjenkins_tests/uninit_var_test/Jenkinsfileinput/tunable_parameters/configurable_model_flags.ina21e1e8e8af9837cc0b9a79eaf45e546696c40201620854783000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comSetting l_update_pressure = .false. since it was causing a problem with the MC3E test and is turned off in all host models anyway. This is BIT_CHANGING. See https://github.com/larson-group/e3sm/issues/6. 2021-05-12 16:26:23 -0500a21e1e8e8af9837cc0b9a79eaf45e546696c4020Setting l_update_pressure = .false. since it was causing a problem with the MC3E test and is turned off in all host models anyway.editinput/tunable_parameters/configurable_model_flags.insrc/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/pdf_closure_module.F90input/stats/all_stats.in0e8ed5d48b7be5f98b78abc60c44627a5c8cf0501620868004000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comRemoving "if" statement around calculation of wp4 in pdf_closure_module.F90 and the same "if" statement around some further manipulation of wp4 in advance_clubb_core. Results are bit-for-bit with this change, since normally all cases calculate wp4 anyway since the "if" condition was always satisfied in normal runs (but not, for example, in some tuning runs). This was done because the new wp3_pr_dfsn term needs wp4 in its current formulation so it needs to always be calculated. See #920. 2021-05-12 20:06:44 -05000e8ed5d48b7be5f98b78abc60c44627a5c8cf050Removing "if" statement around calculation of wp4 in pdf_closure_module.F90 and the same "if" statement around some further manipulation of wp4 in advance_clubb_core. Results are bit-for-bit with this change, since normally all cases calculate wp4 anyway since the "if" condition was always satisfied in normal runs (but not, for example, in some tuning runs). This was done because the new wp3_pr_dfsn term needs wp4 in its current formulation so it needs to always be calculated.editinput/stats/all_stats.ineditsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/CLUBB_core/pdf_closure_module.F90githttp://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensfalse77http://carson.math.uwm.edu/jenkins/view/all/job/clubb_release_diff_test/77/75http://carson.math.uwm.edu/jenkins/view/all/job/clubb_release_diff_test/75/Started by an SCM change7472aec8f29680ca6f8ff2aea8880d22933532a2d672aec8f29680ca6f8ff2aea8880d22933532a2d6refs/remotes/origin/master72aec8f29680ca6f8ff2aea8880d22933532a2d672aec8f29680ca6f8ff2aea8880d22933532a2d6refs/remotes/origin/master72aec8f29680ca6f8ff2aea8880d22933532a2d672aec8f29680ca6f8ff2aea8880d22933532a2d6refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#7434259521419302clubb_release_diff_test #7474false744355SUCCESS1620203771207http://carson.math.uwm.edu/jenkins/view/all/job/clubb_release_diff_test/74/postprocessing/pyplotgen/README.mda39500cbbb10914f618e08cd158d47076ab1986d1620161620000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comAdd extra example to pyplotgen quickstart guide 2021-05-04 15:53:40 -0500a39500cbbb10914f618e08cd158d47076ab1986dAdd extra example to pyplotgen quickstart guideeditpostprocessing/pyplotgen/README.mdpostprocessing/pyplotgen/config/VariableGroupBase.pysrc/CLUBB_core/sigma_sqd_w_module.F90src/CLUBB_core/stats_zm_module.F90e9bf3c5582d4a1b079ef35633294ac8b671fcee11620165243000http://carson.math.uwm.edu/jenkins/user/rhodeskrhodeskrhodesk@uwm.eduChanged safeguard threshold in sigma_sqd_w. This is BIT_CHANGING. For ticket #917. 2021-05-04 16:54:03 -0500e9bf3c5582d4a1b079ef35633294ac8b671fcee1Changed safeguard threshold in sigma_sqd_w.editpostprocessing/pyplotgen/config/VariableGroupBase.pyeditsrc/CLUBB_core/sigma_sqd_w_module.F90editsrc/CLUBB_core/stats_zm_module.F90README72aec8f29680ca6f8ff2aea8880d22933532a2d61620166076000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comThis commit is not BIT_CHANGING but commit b13fff4769b00872c7a92d7f05a1530a2630529d was. Commit b13fff4769b00872c7a92d7f05a1530a2630529d was for ticket #917. 2021-05-04 17:07:56 -050072aec8f29680ca6f8ff2aea8880d22933532a2d6This commit is not BIT_CHANGINGeditREADMEgithttp://carson.math.uwm.edu/jenkins/user/rhodeskrhodeskhttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse75http://carson.math.uwm.edu/jenkins/view/all/job/clubb_release_diff_test/75/73http://carson.math.uwm.edu/jenkins/view/all/job/clubb_release_diff_test/73/