Console Output

+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7,
netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ ./compile.py -debug -python
-- The Fortran compiler identification is GNU 13.1.0
-- The C compiler identification is GNU 13.1.0
-- The CXX compiler identification is GNU 13.1.0
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-ly4g5v5mnoe2su6clyt6sk674bfvfow2/bin/gfortran - skipped
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-ly4g5v5mnoe2su6clyt6sk674bfvfow2/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-ly4g5v5mnoe2su6clyt6sk674bfvfow2/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Compiling with double precision
-- Performing Test NETCDF_ABI_COMPATIBLE
-- Performing Test NETCDF_ABI_COMPATIBLE - Success
-- SUCCESS: netcdf-fortran found.
--   -> Library : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib/libnetcdff.so
--   -> Modules : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/include
Traceback (most recent call last):
  File "<string>", line 1, in <module>
ModuleNotFoundError: No module named 'numpy'
CMake Error at clubb_python_api/CMakeLists.txt:23 (message):
  NumPy/F2PY is required for ENABLE_F2PY=ON.


-- Configuring incomplete, errors occurred!
Using inferred toolchain file: /home/jenkins/workspace/clubb_python_test/cmake/toolchains/linux_x86_64_gcc.cmake
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_python_test/build/gcc_DEBUG_PRECdouble_PYTHON
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_python_test/install/gcc_DEBUG_PRECdouble_PYTHON
about to cmnake /home/jenkins/workspace/clubb_python_test/build/gcc_DEBUG_PRECdouble_PYTHON
Running CMake configure...

ERROR: cmake configure failed.