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fixed 2d array passing into 1d array fns. Technically BIT_CHANGING for multicol
</comment><date>2026-09-22 11:07:39 -0500</date><id>eb20e0988129b0a57d5df04a39b5c4a965e2397f</id><msg>F90 fix multicol+l add dycore grid (#1363)</msg><path><editType>edit</editType><file>src/Benchmark_cases/time_dependent_input.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/remapping_module.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/Benchmark_cases/atex.F90</file></path><path><editType>edit</editType><file>src/Benchmark_cases/prescribe_forcings.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>utilities/check_division.py</affectedPath><commitId>bc8d70735e710ef36f81e42f58843908ae3ddcbc</commitId><timestamp>1790104995000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Delete utilities/check_division.py

@shellwitz and I updated this script to python3, ran it, and discovered that it finds too many instances of division in CLUBB to be useful.  So let's delete it.
</comment><date>2026-09-22 14:23:15 -0500</date><id>bc8d70735e710ef36f81e42f58843908ae3ddcbc</id><msg>Delete utilities/check_division.py</msg><path><editType>delete</editType><file>utilities/check_division.py</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName><id>noreply</id></culprit><inProgress>false</inProgress><nextBuild><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginmaster _class='hudson.plugins.git.util.Build'><buildNumber>73</buildNumber><marked><SHA1>8b60ee73f5faaa22d874985220f1bbaf9e2cc10f</SHA1><branch><SHA1>8b60ee73f5faaa22d874985220f1bbaf9e2cc10f</SHA1><name>refs/remotes/origin/master</name></branch></marked><revision><SHA1>8b60ee73f5faaa22d874985220f1bbaf9e2cc10f</SHA1><branch><SHA1>8b60ee73f5faaa22d874985220f1bbaf9e2cc10f</SHA1><name>refs/remotes/origin/master</name></branch></revision></refsremotesoriginmaster></buildsByBranchName><lastBuiltRevision><SHA1>8b60ee73f5faaa22d874985220f1bbaf9e2cc10f</SHA1><branch><SHA1>8b60ee73f5faaa22d874985220f1bbaf9e2cc10f</SHA1><name>refs/remotes/origin/master</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/clubb.git</remoteUrl><scmName></scmName></action><action></action><action _class='org.jenkinsci.plugins.workflow.cps.EnvActionImpl'></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#73</displayName><duration>223409</duration><estimatedDuration>245599</estimatedDuration><fullDisplayName>clubb_python_test #73</fullDisplayName><id>73</id><keepLog>false</keepLog><number>73</number><queueId>8770</queueId><result>SUCCESS</result><timestamp>1790237046984</timestamp><url>http://carson.math.uwm.edu/jenkins/view/all/job/clubb_python_test/73/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_jax_tests/Jenkinsfile</affectedPath><commitId>8b60ee73f5faaa22d874985220f1bbaf9e2cc10f</commitId><timestamp>1790198131000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Adding a stage in the jax test to just do a basic run with standard_stats
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Improvements (#1360)

* Improve Dash plot responsiveness and bound data caches

* Dash improvements, mainly for performance

* Removing performance audit file that is no longer needed:
</comment><date>2026-09-18 11:19:27 -0500</date><id>af35e5202409ab58c575e8d2841f59d31ba80c94</id><msg>Dash Improvements 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_class='hudson.plugins.git.GitChangeSet'><affectedPath>tests/README</affectedPath><commitId>5b5bf5f74f30e0332db965215e3de5e6baf72d6e</commitId><timestamp>1789749148000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Improving README section for column mirror test
</comment><date>2026-09-18 11:32:28 -0500</date><id>5b5bf5f74f30e0332db965215e3de5e6baf72d6e</id><msg>Improving README section for column mirror test</msg><path><editType>edit</editType><file>tests/README</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>clubb_jax/src/CLUBB_core/fill_holes.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/LY93_pdf.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/new_hybrid_pdf.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/new_hybrid_pdf_main.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/adg1_adg2_3d_luhar_pdf.py</affectedPath><affectedPath>clubb_jax/tests/test_full_timestep_grad.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/mixing_length.py</affectedPath><affectedPath>clubb_jax/tests/test_fill_holes_mean.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/setup_clubb_pdf_params.py</affectedPath><affectedPath>clubb_jax/tests/test_fill_holes_global.py</affectedPath><affectedPath>clubb_jax/tests/test_differentiability.py</affectedPath><affectedPath>clubb_jax/tests/test_fill_holes_autodiff.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/new_pdf.py</affectedPath><affectedPath>clubb_jax/tests/test_transform_pdf_chi_eta_component.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/pdf_closure_module.py</affectedPath><affectedPath>clubb_jax/tests/test_splatting_autodiff.py</affectedPath><affectedPath>clubb_jax/src/advance_clubb_to_end.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/pdf_utilities.py</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/new_tsdadg_pdf.py</affectedPath><affectedPath>clubb_jax/tests/test_fill_holes_sliding_window.py</affectedPath><affectedPath>clubb_jax/README.md</affectedPath><affectedPath>clubb_jax/src/CLUBB_core/advance_helper_module.py</affectedPath><affectedPath>clubb_jax/tests/test_numerics_autodiff.py</affectedPath><commitId>77b73e25b7c54c85e9714178efbd6dc893834dc5</commitId><timestamp>1789784882000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Making certain things differentiation safe, various parts had issues with sqrt or divisions that needed clipping for reverse mode calcualtions. Lot's of code sections seemed to already have worked around this with a safe_sqrt method (or some variation) that I standardized and put in advance_helper. (#1361)
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