Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv,
netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ ulimit -s 8388608
+ ./tests/run_jax_vs_fortran_cases.py -stats input/stats/standard_stats.in -j 4
==> No compatible Python found for cpu; uv will download Python 3.12
==> Installing uv 0.11.32 in /home/jenkins/workspace/clubb_jax_tests_branch/.clubb-jax-tools/bin
downloading uv 0.11.32 x86_64-unknown-linux-gnu
installing to /home/jenkins/workspace/clubb_jax_tests_branch/.clubb-jax-tools/bin
uv
uvx
everything's installed!
==> uv is ready: uv 0.11.32 (x86_64-unknown-linux-gnu)
Downloading cpython-3.12.13-linux-x86_64-gnu (download) (32.6MiB)
Downloaded cpython-3.12.13-linux-x86_64-gnu (download)
Using CPython 3.12.13
Creating virtual environment at: .venv-jax
Activate with: source .venv-jax/bin/activate
==> Installing JAX 0.11.0 (cpu) and requirements from /home/jenkins/workspace/clubb_jax_tests_branch/clubb_jax/requirements.txt
Using Python 3.12.13 environment at: .venv-jax
Resolved 15 packages in 356ms
Downloading pygments (1.2MiB)
Downloading scipy (33.7MiB)
Downloading jax (3.1MiB)
Downloading numpy (15.9MiB)
Downloading netcdf4 (9.7MiB)
Downloading jaxlib (83.2MiB)
Downloading cftime (1.6MiB)
Downloaded cftime
Downloaded pygments
Downloaded netcdf4
Downloaded jax
Downloaded numpy
Downloaded scipy
Downloaded jaxlib
Prepared 15 packages in 3.01s
Installed 15 packages in 55ms
+ certifi==2026.7.22
+ cftime==1.6.5
+ iniconfig==2.3.0
+ jax==0.11.0
+ jaxlib==0.11.0
+ ml-dtypes==0.6.0
+ netcdf4==1.7.4
+ numpy==2.5.3
+ opt-einsum==3.4.0
+ packaging==26.3
+ pluggy==1.6.0
+ pygments==2.21.0
+ pytest==9.1.1
+ scipy==1.18.1
+ tabulate==0.10.0
CLUBB JAX runtime:
Environment: /home/jenkins/workspace/clubb_jax_tests_branch/.venv-jax (Python 3.12)
Accelerator: cpu
JAX: 0.11.0 (jaxlib 0.11.0)
Device: cpu:0
Run settings:
Output: /home/jenkins/workspace/clubb_jax_tests_branch/output/tests/jax_driver_test_results
Statistics: input/stats/standard_stats.in
Debug: case default
Forwarded to both runs: -stats input/stats/standard_stats.in
Columns: 4
Workers: 4
Comparison limits: absolute 1e-07; percentage 1e-07%
Cases and flag sets:
20 cases x 1 flag set = 20 JAX/Fortran pairs
Flag sets:
default
Cases:
arm (360 iterations)
atex (360 iterations)
bomex (native duration)
cobra (360 iterations)
dycoms2_rf01 (native duration)
dycoms2_rf01_fixed_sst (300 iterations)
dycoms2_rf02_nd (native duration)
fire (native duration)
gabls2 (360 iterations)
gabls3_night (360 iterations)
jun25_altocu (180 iterations)
neutral (native duration)
wangara (native duration)
dycoms2_rf02_do (native duration)
dycoms2_rf02_ds (240 iterations)
lba_kk (360 iterations)
- input case: lba
- microphysics_setting.microphys_scheme = "khairoutdinov_kogan"
- microphysics_setting.lh_microphys_type = "disabled"
- microphysics_setting.l_ice_microphys = .false.
- microphysics_setting.l_graupel = .false.
rico (380 iterations)
- dt_main: 60 s
lba (93 iterations)
- percentage limit: 0.001%
- microphysics_setting.lh_microphys_type = "disabled"
clex9_oct14 (73 iterations)
- percentage limit: 0.001%
nov11_altocu (62 iterations)
- percentage limit: 0.001%
[Status ] Flag set Case Timesteps JAX (s) Fortran (s) Total (s)
-----------------------------------------------------------------------------------------------------------------
[match ] default bomex 360 / 360 260.5 6.9 276.2
[match ] default arm 360 / 360 265.2 9.3 287.6
[match ] default cobra 360 / 360 270.4 8.6 289.5
[match ] default atex 360 / 360 274.9 12.3 304.9
[match ] default fire 180 / 180 148.4 3.2 155.6
[match ] default dycoms2_rf01_fixed_sst 300 / 300 200.9 2.7 208.5
[match ] default dycoms2_rf01 240 / 240 223.2 17.0 254.6
[match ] default dycoms2_rf02_nd 360 / 360 246.1 4.4 255.3
[match ] default gabls3_night 360 / 360 82.7 4.1 89.1
[match ] default gabls2 360 / 360 117.4 18.1 138.0
[match ] default jun25_altocu 180 / 180 150.7 6.9 163.1
[match ] default neutral 360 / 360 235.0 7.0 248.0
[match ] default wangara 480 / 480 269.9 7.4 283.9
[match ] default dycoms2_rf02_ds 240 / 240 382.5 20.0 408.5
[match ] default rico 380 / 380 293.9 8.2 304.7
[match ] default dycoms2_rf02_do 360 / 360 555.0 31.0 595.3
[match ] default lba_kk 360 / 360 514.6 16.9 539.5
[match ] default lba 93 / 93 225.5 4.7 234.2
[match ] default clex9_oct14 73 / 73 167.3 4.2 175.3
[match ] default nov11_altocu 62 / 62 155.2 3.1 161.5
Flag set default:
Match Diff Failed
----- ---- ------
20 0 0
Total time: 23m 16.5s
Results JSON: /home/jenkins/workspace/clubb_jax_tests_branch/output/tests/jax_driver_test_results/case_compare_summary.json
Bindiff log: /home/jenkins/workspace/clubb_jax_tests_branch/output/tests/jax_driver_test_results/final_bindiff.log [passed]
