Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl,
netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ ./compile.py -debug -openmp -run_tests
-- The Fortran compiler identification is GNU 13.1.0
-- The C compiler identification is GNU 13.1.0
-- The CXX compiler identification is GNU 13.1.0
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-m5i6qvtqmd4lm4sd2zvpgk75ong5ehbm/bin/gfortran - skipped
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-m5i6qvtqmd4lm4sd2zvpgk75ong5ehbm/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-m5i6qvtqmd4lm4sd2zvpgk75ong5ehbm/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Compiling with double precision
-- Found PkgConfig: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/pkgconf-2.2.0-m7jt4djj7ycrz7g6yadslcm2qmulsagd/bin/pkg-config (found version "2.2.0")
-- Checking for module 'netcdf-fortran'
-- Found netcdf-fortran, version 4.5.3
-- netcdf-fortran found via pkg-config
-- Include dirs: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/include;/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-c-4.9.2-xduzp77vg5dgkw7bifjoamebhjhrxhow/include
-- Libraries: netcdff
-- Derived NetCDFFortran_ROOT = /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i
-- Found OpenMP_Fortran: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5") found components: Fortran
-- OpenMP Fortran support found
-- Flags: -fopenmp
-- Includes:
-- Libraries:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-m5i6qvtqmd4lm4sd2zvpgk75ong5ehbm/lib64/libgomp.so;/lib/x86_64-linux-gnu/libpthread.a
-- Configuring done
-- Generating done
-- Build files have been written to: /home/jenkins/workspace/clubb_cmake_test_branch/build/gcc_DEBUG_PRECdouble
Using inferred toolchain file: /home/jenkins/workspace/clubb_cmake_test_branch/cmake/toolchains/linux_x86_64_gcc.cmake
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_cmake_test_branch/build/gcc_DEBUG_PRECdouble
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble
about to cmnake /home/jenkins/workspace/clubb_cmake_test_branch/build/gcc_DEBUG_PRECdouble
Running CMake configure...
Scanning dependencies of target clubb_lapack_shared
[ 0%] Building Fortran object src/Lapack/Lapack_shared/CMakeFiles/clubb_lapack_shared.dir/lsame.f.o
[ 0%] Building Fortran object src/Lapack/Lapack_shared/CMakeFiles/clubb_lapack_shared.dir/xerbla.f.o
Scanning dependencies of target scm_activation_lib
[ 0%] Building Fortran object src/Microphys/SCM_Activation/CMakeFiles/scm_activation_lib.dir/aer_ccn_act_k.F90.o
Scanning dependencies of target clubb_lapack_single
Scanning dependencies of target clubb_lapack_double
[ 0%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ilaslc.f.o
[ 1%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ilaslr.f.o
[ 1%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dasum.f.o
[ 1%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sasum.f.o
[ 1%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/isamax.f.o
[ 1%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/saxpy.f.o
[ 1%] Built target clubb_lapack_shared
[ 1%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/scopy.f.o
[ 2%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sdot.f.o
[ 2%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbcon.f.o
[ 3%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/daxpy.f.o
[ 3%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dcopy.f.o
[ 3%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbequ.f.o
[ 3%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbmv.f.o
[ 4%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbrfs.f.o
[ 4%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/ddot.f.o
[ 4%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbcon.f.o
[ 5%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbequ.f.o
[ 5%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbmv.f.o
[ 5%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbrfs.f.o
[ 5%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbsv.f.o
[ 5%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbsv.f.o
[ 5%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbsvx.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbtf2.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbsvx.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbtf2.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbtrf.f.o
[ 6%] Linking Fortran static library libscm_activation_lib.a
[ 7%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbtrs.f.o
[ 7%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgemm.f.o
[ 7%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbtrf.f.o
[ 7%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbtrs.f.o
[ 7%] Built target scm_activation_lib
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[ 7%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dger.f.o
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[ 8%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgtrfs.f.o
[ 8%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgtcon.f.o
[ 8%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgtsv.f.o
[ 8%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgtsv.f.o
[ 9%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgtrfs.f.o
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[ 10%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgttrf.f.o
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[ 10%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgttrs.f.o
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[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/math_utilities.F90.o
[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o
[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o
[ 76%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o
/home/jenkins/workspace/clubb_cmake_test_branch/src/SILHS/silhs_importance_sample_module.F90:638:62:
633 | do category=1, num_importance_categories
| 2
......
638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then
| 1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
[ 76%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o
[ 76%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o
[ 76%] Linking Fortran static library libsilhs_lib.a
[ 76%] Built target silhs_lib
Scanning dependencies of target numerical_recipes_lib
Scanning dependencies of target radiation_lib
[ 76%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o
[ 76%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o
[ 76%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o
[ 77%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o
[ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o
[ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o
[ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o
[ 78%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o
[ 78%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o
[ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o
[ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o
[ 78%] Linking Fortran static library libmorrison_microphys_lib.a
[ 78%] Built target morrison_microphys_lib
[ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o
[ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o
[ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o
[ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o
/home/jenkins/workspace/clubb_cmake_test_branch/src/Numerical_recipes/ran_state.f90:8:59:
8 | INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1
| 1
Warning: Integer outside symmetric range implied by Standard Fortran at (1)
/home/jenkins/workspace/clubb_cmake_test_branch/src/Numerical_recipes/amebsa.f90:25:31:
25 | INTEGER(I4B), PARAMETER :: NMAX=200
| 1
Warning: Unused parameter 'nmax' declared at (1) [-Wunused-parameter]
[ 80%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o
[ 81%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o
[ 81%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o
[ 81%] Linking Fortran static library libnumerical_recipes_lib.a
[ 81%] Built target numerical_recipes_lib
[ 81%] Linking Fortran static library libradiation_lib.a
[ 81%] Built target radiation_lib
Scanning dependencies of target input_fields_lib
[ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o
[ 82%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o
[ 82%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_grads.F90.o
/home/jenkins/workspace/clubb_cmake_test_branch/src/Input_fields/input_reader.F90:498:28:
491 | do i=1, dim_grid
| 2
......
498 | if ( grid(i) < grid(i-1) ) then
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o
[ 84%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o
[ 84%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o
[ 84%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o
[ 84%] Linking Fortran static library libinput_fields_lib.a
[ 84%] Built target input_fields_lib
Scanning dependencies of target microphys_lib
Scanning dependencies of target benchmark_cases_lib
Scanning dependencies of target G_unit_test_lib
[ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o
[ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o
[ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o
[ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o
[ 85%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o
[ 86%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o
[ 86%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o
[ 86%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o
/home/jenkins/workspace/clubb_cmake_test_branch/src/Microphys/ice_dfsn_module.F90:272:25:
207 | do k = gr%nzt, 1, -1
| 2
......
272 | mass_ice_cryst(k-1) = mass_ice_cryst(k) &
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_cmake_test_branch/src/Microphys/ice_dfsn_module.F90:287:25:
207 | do k = gr%nzt, 1, -1
| 2
......
287 | mass_ice_cryst(k-1) = mass_ice_cryst(k)
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[ 86%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o
[ 86%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o
[ 86%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o
[ 87%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o
[ 87%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o
[ 87%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o
[ 87%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o
[ 87%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o
/home/jenkins/workspace/clubb_cmake_test_branch/src/G_unit_test_types/fill_holes_tests.F90:407:27:
407 | .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_cmake_test_branch/src/G_unit_test_types/fill_holes_tests.F90:406:22:
406 | if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_cmake_test_branch/src/G_unit_test_types/fill_holes_tests.F90:462:22:
462 | if ( any( field_rev_rev /= field ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_cmake_test_branch/src/G_unit_test_types/fill_holes_tests.F90:221:27:
221 | .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_cmake_test_branch/src/G_unit_test_types/fill_holes_tests.F90:220:22:
220 | if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_cmake_test_branch/src/G_unit_test_types/fill_holes_tests.F90:275:22:
275 | if ( any( field_rev_rev /= field ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
[ 88%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o
[ 88%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o
[ 89%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o
[ 89%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o
[ 89%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o
[ 89%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o
[ 90%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o
[ 90%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o
[ 90%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o
[ 91%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o
[ 91%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o
[ 91%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/bomex.F90.o
[ 92%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o
[ 92%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o
[ 92%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o
[ 92%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_a.F90.o
[ 93%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o
[ 93%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf01.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf02.F90.o
[ 94%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o
[ 94%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o
[ 94%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o
[ 94%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o
[ 96%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o
[ 96%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o
[ 96%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex.F90.o
[ 96%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex_long.F90.o
[ 96%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o
[ 96%] Linking Fortran static library libG_unit_test_lib.a
[ 96%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o
[ 96%] Built target G_unit_test_lib
Scanning dependencies of target G_unit_tests
[ 96%] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o
[ 96%] Linking Fortran executable G_unit_tests
[ 96%] Linking Fortran static library libbenchmark_cases_lib.a
[ 96%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/estimate_scm_microphys_module.F90.o
[ 96%] Built target benchmark_cases_lib
[ 96%] Built target G_unit_tests
[ 96%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/lh_microphys_driver_module.F90.o
[ 97%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o
[ 98%] Linking Fortran static library libmicrophys_lib.a
[ 98%] Built target microphys_lib
Scanning dependencies of target clubb_driver_lib
[ 99%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o
[ 99%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o
[ 99%] Linking Fortran static library libclubb_driver_lib.a
[ 99%] Built target clubb_driver_lib
Scanning dependencies of target clubb_driver_test
Scanning dependencies of target clubb_tuner
[ 99%] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o
[ 99%] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o
Scanning dependencies of target clubb_thread_test
Scanning dependencies of target clubb_standalone
[100%] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o
[100%] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o
[100%] Linking Fortran executable clubb_driver_test
[100%] Linking Fortran executable clubb_standalone
[100%] Linking Fortran executable clubb_thread_test
[100%] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o
[100%] Built target clubb_driver_test
[100%] Built target clubb_standalone
[100%] Built target clubb_thread_test
[100%] Linking Fortran executable clubb_tuner
[100%] Built target clubb_tuner
Install the project...
-- Install configuration: "Debug"
-- Installing: /home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/clubb_tuner
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/G_unit_tests
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/clubb_thread_test
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/clubb_standalone
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/clubb_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test_branch/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
CLUBBStandardsCheck.py: beginning check on src
PASS: 0 checks failed for src
CLUBBStandardsCheck.py: beginning check on src/CLUBB_core
PASS: 0 checks failed for src/CLUBB_core
CLUBBStandardsCheck.py: beginning check on src/SILHS
PASS: 0 checks failed for src/SILHS
CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases
PASS: 0 checks failed for src/Benchmark_cases
CLUBBStandardsCheck.py: beginning check on src/Radiation
PASS: 0 checks failed for src/Radiation
CLUBBStandardsCheck.py: beginning check on src/Microphys
PASS: 0 checks failed for src/Microphys
CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys
PASS: 0 checks failed for src/Microphys/KK_microphys
CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types
[92mBuild completed successfully, and all source code checks passed.[0m
Running CMake ctests
Test project /home/jenkins/workspace/clubb_cmake_test_branch/build/gcc_DEBUG_PRECdouble
Start 1: _init_output_dir
1/11 Test #1: _init_output_dir ................. Passed 0.03 sec
Start 2: bomex_100iter
2/11 Test #2: bomex_100iter .................... Passed 1.70 sec
Start 3: wangara_100iter
3/11 Test #3: wangara_100iter .................. Passed 1.68 sec
Start 4: fire_100iter
4/11 Test #4: fire_100iter ..................... Passed 1.66 sec
Start 5: atex_100iter
5/11 Test #5: atex_100iter ..................... Passed 2.08 sec
Start 6: rico_silhs_100iter
6/11 Test #6: rico_silhs_100iter ............... Passed 2.10 sec
Start 7: arm_97_50iter
7/11 Test #7: arm_97_50iter .................... Passed 2.48 sec
Start 8: cobra_100iter
8/11 Test #8: cobra_100iter .................... Passed 1.90 sec
Start 9: arm_r8029_100iter
9/11 Test #9: arm_r8029_100iter ................ Passed 1.94 sec
Start 10: arm_100iter_8col
10/11 Test #10: arm_100iter_8col ................. Passed 1.91 sec
Start 11: arm_1000iter_5dt
11/11 Test #11: arm_1000iter_5dt ................. Passed 5.17 sec
100% tests passed, 0 tests failed out of 11
Total Test time (real) = 22.65 sec
[92mAll tests passed.[0m
