Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load intel netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ ./compile.py -precision single -run_tests
-- Compiling with single precision
-- netcdf-fortran found via pkg-config
-- Include dirs: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g/include;/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-c-4.9.2-mrmfc7travjahj5qigj26qtr5jqutebk/include
-- Libraries: netcdff
-- Derived NetCDFFortran_ROOT = /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g
-- Configuring done
-- Generating done
-- Build files have been written to: /home/jenkins/workspace/clubb_cmake_test/build/intel_PRECsingle
Using inferred toolchain file: /home/jenkins/workspace/clubb_cmake_test/cmake/toolchains/linux_x86_64_intel.cmake
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_cmake_test/build/intel_PRECsingle
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle
about to cmnake /home/jenkins/workspace/clubb_cmake_test/build/intel_PRECsingle
Running CMake configure...
Scanning dependencies of target clubb_lapack_shared
Scanning dependencies of target scm_activation_lib
Scanning dependencies of target clubb_lapack_double
[ 0%] Building Fortran object src/Microphys/SCM_Activation/CMakeFiles/scm_activation_lib.dir/aer_ccn_act_k.F90.o
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[ 3%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/saxpy.f.o
[ 4%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sdot.f.o
[ 4%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbcon.f.o
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[ 6%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbtf2.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbsv.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbtrf.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbtrs.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbsvx.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgemm.f.o
[ 6%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbtf2.f.o
[ 6%] Linking Fortran static library libscm_activation_lib.a
[ 6%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbtrf.f.o
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[ 8%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sgbtrs.f.o
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/home/jenkins/workspace/clubb_cmake_test/src/SILHS/silhs_importance_sample_module.F90(901): warning #5462: Global name too long, shortened from: silhs_importance_sample_moduleeight_cluster_allocation_mp_NUM_CATEGORIES_IN_CLUSTER to: s_importance_sample_moduleeight_cluster_allocation_mp_NUM_CATEGORIES_IN_CLUSTER
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Install the project...
-- Install configuration: "Release"
-- Installing: /home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/clubb_tuner
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/clubb_tuner" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g/lib"
-- Installing: /home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/G_unit_tests
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/G_unit_tests" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g/lib"
-- Installing: /home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/clubb_thread_test
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/clubb_thread_test" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g/lib"
-- Installing: /home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/clubb_standalone
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/clubb_standalone" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g/lib"
-- Installing: /home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/clubb_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/intel_PRECsingle/clubb_driver_test" to "/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/oneapi-2023.2.0/netcdf-fortran-4.5.3-vnle5nytdsohpf3fkn6waiuu5mcv5t6g/lib"
CLUBBStandardsCheck.py: beginning check on src
PASS: 0 checks failed for src
CLUBBStandardsCheck.py: beginning check on src/CLUBB_core
PASS: 0 checks failed for src/CLUBB_core
CLUBBStandardsCheck.py: beginning check on src/SILHS
PASS: 0 checks failed for src/SILHS
CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases
PASS: 0 checks failed for src/Benchmark_cases
CLUBBStandardsCheck.py: beginning check on src/Radiation
PASS: 0 checks failed for src/Radiation
CLUBBStandardsCheck.py: beginning check on src/Microphys
PASS: 0 checks failed for src/Microphys
CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys
PASS: 0 checks failed for src/Microphys/KK_microphys
CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types
[92mBuild completed successfully, and all source code checks passed.[0m
Running CMake ctests
Test project /home/jenkins/workspace/clubb_cmake_test/build/intel_PRECsingle
Start 1: _init_output_dir
1/11 Test #1: _init_output_dir ................. Passed 0.06 sec
Start 2: bomex_100iter
2/11 Test #2: bomex_100iter .................... Passed 1.12 sec
Start 3: wangara_100iter
3/11 Test #3: wangara_100iter .................. Passed 0.65 sec
Start 4: fire_100iter
4/11 Test #4: fire_100iter ..................... Passed 0.75 sec
Start 5: atex_100iter
5/11 Test #5: atex_100iter ..................... Passed 0.97 sec
Start 6: rico_silhs_100iter
6/11 Test #6: rico_silhs_100iter ............... Passed 0.93 sec
Start 7: arm_97_50iter
7/11 Test #7: arm_97_50iter .................... Passed 0.98 sec
Start 8: cobra_100iter
8/11 Test #8: cobra_100iter .................... Passed 0.88 sec
Start 9: arm_r8029_100iter
9/11 Test #9: arm_r8029_100iter ................ Passed 0.81 sec
Start 10: arm_100iter_8col
10/11 Test #10: arm_100iter_8col ................. Passed 0.47 sec
Start 11: arm_1000iter_5dt
11/11 Test #11: arm_1000iter_5dt ................. Passed 1.63 sec
100% tests passed, 0 tests failed out of 11
Total Test time (real) = 9.27 sec
[92mAll tests passed.[0m
