Started by an SCM change Obtained jenkins_tests/clubb_BFB_r8029_flags_gfortran_test/Jenkinsfile from git https://github.com/larson-group/clubb.git [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor Running on Jenkins in /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' using GIT_ASKPASS to set credentials larsongroupsysadmin github token > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 89be3d5fd401ed3393a0a251b98752e552010ab9 (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 89be3d5fd401ed3393a0a251b98752e552010ab9 # timeout=10 Commit message: "Restart clubb 2d arr slicing fix (#1366)" > git rev-list --no-walk 8f4f60104e839514cc8fa69801bebe0d1e26dfbb # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Update sys_admin Repo) [Pipeline] sh + git -C /home/pub/jenkins_BFB_test_configs/sys_admin pull Already up to date. [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv, netcdf-c/4.9.2, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_r8029_flags_gfortran_test_config -- The Fortran compiler identification is GNU 13.1.0 -- The C compiler identification is GNU 13.1.0 -- The CXX compiler identification is GNU 13.1.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran - skipped -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Compiling with double precision -- Performing Test NETCDF_ABI_COMPATIBLE -- Performing Test NETCDF_ABI_COMPATIBLE - Success -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble about to cmnake /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Running CMake configure... 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Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript] [783/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o [784/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o [785/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o [786/923] Linking Fortran static library src/SILHS/libsilhs_lib.a [787/923] Generating Fortran dyndep file src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/Fortran.dd [788/923] Generating Fortran dyndep file src/Radiation/CMakeFiles/radiation_lib.dir/Fortran.dd [789/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o [790/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o [791/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o [792/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o [793/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o [794/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o [795/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o [796/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o [797/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o [798/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o [799/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o [800/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o [801/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o [802/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o [803/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Numerical_recipes/ran_state.f90:8:59: 8 | INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1 | 1 Warning: Integer outside symmetric range implied by Standard Fortran at (1) [804/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o [805/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o [806/923] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o [807/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o [808/923] Linking Fortran static library src/Microphys/Morrison_microphys/libmorrison_microphys_lib.a [809/923] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a [810/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o [811/923] Linking Fortran static library src/Radiation/libradiation_lib.a [812/923] Generating Fortran dyndep file src/Input_fields/CMakeFiles/input_fields_lib.dir/Fortran.dd [813/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o [814/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o [815/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o [816/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o [817/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o [818/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] [819/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o [820/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o [821/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o [822/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1038:15: 1038 | if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1040:15: 1040 | if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1042:15: 1042 | if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1045:15: 1045 | if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1047:15: 1047 | if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1049:15: 1049 | if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:356:13: 356 | if( ANY(Ts_in == 0.0) ) then | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:620:12: 620 | if(T_in(i,nlev+1)/=missing_value) then | 1 Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:636:12: 636 | if(T_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:638:12: 638 | if(q_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:640:12: 640 | if(u_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:642:12: 642 | if(v_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:647:15: 647 | if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:651:15: 651 | if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:658:12: 658 | if(ug_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:660:12: 660 | if(vg_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1252:42: 1252 | character dim_name*( NF90_MAX_NAME ) | 1 Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1254:33: 1254 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1254:43: 1254 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1254:46: 1254 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'i' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1237:60: 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, & | 1 Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1237:54: 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, & | 1 Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1238:23: 1238 | var, use_NF90_REAL, status, required) | 1 Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1167:67: 1167 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, & | 1 Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:751:51: 751 | get_add_surface_data, ntime, & | 1 Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:750:81: 750 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, & | 1 Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:290:32: 290 | integer :: STATUS, i, n, nlat, nlon | 1 Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:290:38: 290 | integer :: STATUS, i, n, nlat, nlon | 1 Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:291:19: 291 | integer :: varID, NCID | 1 Warning: Unused variable 'varid' declared at (1) [-Wunused-variable] [823/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_module.F90:260:16: 260 | integer :: k | 1 Warning: Unused variable 'k' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_module.F90:264:17: 264 | qtm_forcing ! Specified total water spec. humidity tendency [kg/kg/s] | 1 Warning: Unused variable 'qtm_forcing' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/readiopdata_module.F90:243:31: 243 | subroutine readiopdata_frc( rtm, gr, thlm_forcing, rtm_forcing ) | 1 Warning: Unused dummy argument 'rtm' at (1) [-Wunused-dummy-argument] [824/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:39:8: 39 | use constants_clubb, only: & | 1 Warning: Unused parameter 'kappa' which has been explicitly imported at (1) [-Wunused-parameter] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:57:8: 57 | use input_names, only: & | 1 Warning: Unused parameter 'omega_name' which has been explicitly imported at (1) [-Wunused-parameter] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:39:8: 39 | use constants_clubb, only: & | 1 Warning: Unused parameter 'p0' which has been explicitly imported at (1) [-Wunused-parameter] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:165:13: 165 | p_in_Pa, & ! Pressure [Pa] | 1 Warning: Array 'p_in_pa' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:160:8: 160 | rt, & ! Total water mixing ratio sounding [kg/kg] | 1 Warning: Array 'rt' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:166:10: 166 | subs ! Vertical velocity sounding [m/s or Pa/s] | 1 Warning: Array 'subs' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:159:11: 159 | theta, & ! Liquid potential temperature sounding [K] | 1 Warning: Array 'theta' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:161:7: 161 | u, & ! u wind sounding [m/s] | 1 Warning: Array 'u' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:163:8: 163 | ug, & ! u geostrophic wind sounding [m/s] | 1 Warning: Array 'ug' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:162:7: 162 | v, & ! v wind sounding [m/s] | 1 Warning: Array 'v' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:164:8: 164 | vg, & ! v geostrophic wind sounding [m/s] | 1 Warning: Array 'vg' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Input_fields/sounding.F90:158:7: 158 | z, & ! Altitude [m] | 1 Warning: Array 'z' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] [825/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o [826/923] Linking Fortran static library src/Input_fields/libinput_fields_lib.a [827/923] Generating Fortran dyndep file src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/Fortran.dd [828/923] Generating Fortran dyndep file src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Fortran.dd [829/923] Generating Fortran dyndep file src/Microphys/CMakeFiles/microphys_lib.dir/Fortran.dd [830/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o [831/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o [832/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o [833/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o [834/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o [835/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o [836/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o [837/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o [838/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o [839/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o [840/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o [841/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o [842/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o [843/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o [844/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o [845/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:407:27: 407 | .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:406:22: 406 | if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:462:22: 462 | if ( any( field_rev_rev /= field ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:221:27: 221 | .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:220:22: 220 | if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:275:22: 275 | if ( any( field_rev_rev /= field ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] [846/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o [847/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o [848/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o [849/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o [850/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o [851/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o [852/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o [853/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o [854/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Microphys/ice_dfsn_module.F90:282:27: 214 | do k = gr%nzt, 1, -1 | 2 ...... 282 | mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k) + dmass_ice_cryst(i,k) | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Microphys/ice_dfsn_module.F90:296:27: 214 | do k = gr%nzt, 1, -1 | 2 ...... 296 | mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k) | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] [855/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o [856/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o [857/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o [858/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o [859/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o [860/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o [861/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o [862/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o [863/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o [864/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o [865/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o [866/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o [867/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o [868/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o [869/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o [870/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o [871/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf02.F90.o [872/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o [873/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o [874/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/bomex.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/Benchmark_cases/bomex.F90:22:48: 22 | gr, rtm, l_readiopdata, & | 1 Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument] [875/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o [876/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o [877/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf01.F90.o [878/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o [879/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90.o [880/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90.o [881/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex_long.F90.o [882/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex.F90.o [883/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_a.F90.o [884/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o [885/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o [886/923] Linking Fortran static library src/G_unit_test_types/libG_unit_test_lib.a [887/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o [888/923] Linking Fortran static library src/Benchmark_cases/libbenchmark_cases_lib.a [889/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o [890/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o [891/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/estimate_scm_microphys_module.F90.o [892/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/lh_microphys_driver_module.F90.o [893/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o [894/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o [895/923] Linking Fortran static library src/Microphys/libmicrophys_lib.a [896/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd [897/923] Generating Fortran dyndep file src/CMakeFiles/G_unit_tests.dir/Fortran.dd [898/923] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o [899/923] Linking Fortran executable src/G_unit_tests [900/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o [901/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_driver.F90:5539:76: 5539 | p_sfc, rtm_sfc, rtm, l_readiopdata, & !thlm_sfc, & | 1 Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument] [902/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_loss_driver.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver.F90:255:28: 255 | is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) ) | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] [903/923] Linking Fortran static library src/libclubb_driver_lib.a [904/923] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone.dir/Fortran.dd [905/923] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone_loss.dir/Fortran.dd [906/923] Generating Fortran dyndep file src/CMakeFiles/clubb_tuner.dir/Fortran.dd [907/923] Generating Fortran dyndep file src/CMakeFiles/clubb_loss_driver_test.dir/Fortran.dd [908/923] Generating Fortran dyndep file src/CMakeFiles/clubb_thread_test.dir/Fortran.dd [909/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_test.dir/Fortran.dd [910/923] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o [911/923] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o [912/923] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o [913/923] Building Fortran object src/CMakeFiles/clubb_standalone_loss.dir/clubb_standalone_loss.F90.o [914/923] Linking Fortran executable src/clubb_thread_test [915/923] Linking Fortran executable src/clubb_driver_test [916/923] Linking Fortran executable src/clubb_standalone [917/923] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o [918/923] Building Fortran object src/CMakeFiles/clubb_loss_driver_test.dir/clubb_loss_driver_test.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:273:14: 273 | if ( any( test_scaled_rmse /= reference_scaled_rmse ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:278:14: 278 | if ( any( test_correlation /= reference_correlation ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:283:14: 283 | if ( any( test_std_ratio /= reference_std_ratio ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:288:14: 288 | if ( any( test_centered_rmse_norm /= reference_centered_rmse_norm ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:293:14: 293 | if ( any( test_bias_norm /= reference_bias_norm ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:512:14: 512 | if ( any( clubb_params_all_1 /= clubb_params_all_2 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:521:14: 521 | any( reinit_bias_norm_1 /= reinit_bias_norm_2 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:520:14: 520 | any( reinit_centered_rmse_norm_1 /= reinit_centered_rmse_norm_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:519:14: 519 | any( reinit_std_ratio_1 /= reinit_std_ratio_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:518:14: 518 | any( reinit_correlation_1 /= reinit_correlation_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:517:14: 517 | if ( any( reinit_scaled_rmse_1 /= reinit_scaled_rmse_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:431:14: 431 | if ( all( tweaked_scaled_rmse == reference_scaled_rmse ) ) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:371:14: 371 | any( manual_bias_norm_2 /= manual_bias_norm_1 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:370:14: 370 | any( manual_centered_rmse_norm_2 /= manual_centered_rmse_norm_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:369:14: 369 | any( manual_std_ratio_2 /= manual_std_ratio_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:368:14: 368 | any( manual_correlation_2 /= manual_correlation_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_loss_driver_test.F90:367:14: 367 | if ( any( manual_scaled_rmse_2 /= manual_scaled_rmse_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] [919/923] Linking Fortran executable src/clubb_standalone_loss [920/923] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o [921/923] Linking Fortran executable src/clubb_loss_driver_test [922/923] Linking Fortran executable src/clubb_tuner [922/923] Install the project... -- Install configuration: "Debug" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types [92mBuild completed successfully, and all source code checks passed.[0m /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/bomex.in Output directory: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output - using install dir (latest): /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble - using executable: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/run_scripts/../install/latest/clubb_standalone =================== Running bomex =================== 2026/09/29 03:38:47 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 1.00000000000000000000 C1b 1.00000000000000000000 C1c 1.00000000000000000000 C2rt 1.00000000000000000000 C2thl 1.00000000000000000000 C2rtthl 2.00000000000000000000 C4 5.20000000000000017764 C_uu_shr 0.29999999999999998890 C_uu_buoy 0.29999999999999998890 C6rt 4.00000000000000000000 C6rtb 6.00000000000000000000 C6rtc 1.00000000000000000000 C6thl 4.00000000000000000000 C6thlb 6.00000000000000000000 C6thlc 1.00000000000000000000 C7 0.50000000000000000000 C7b 0.80000000000000004441 C7c 0.50000000000000000000 C8 3.00000000000000000000 C8b 0.00000000000000000000 C10 3.29999999999999982236 C11 0.80000000000000004441 C11b 0.34999999999999997780 C11c 0.50000000000000000000 C12 1.00000000000000000000 C13 0.10000000000000000555 C14 1.00000000000000000000 C_wp2_pr_dfsn 0.00000000000000000000 C_wp3_pr_tp 0.00000000000000000000 C_wp3_pr_turb 0.40000000000000002220 C_wp3_pr_dfsn 0.00000000000000000000 C_wp2_splat 0.00000000000000000000 C6rt_Lscale0 14.00000000000000000000 C6thl_Lscale0 14.00000000000000000000 C7_Lscale0 0.84999999999999997780 wpxp_L_thresh 60.00000000000000000000 c_K 0.20000000000000001110 c_K1 0.75000000000000000000 nu1 20.00000000000000000000 c_K2 0.12500000000000000000 nu2 5.00000000000000000000 c_K6 0.37500000000000000000 nu6 5.00000000000000000000 c_K8 1.25000000000000000000 nu8 20.00000000000000000000 c_K9 0.25000000000000000000 nu9 20.00000000000000000000 nu10 0.00000000000000000000 c_K_hm 0.75000000000000000000 c_K_hmb 0.75000000000000000000 K_hm_min_coef 0.10000000000000000555 nu_hm 1.50000000000000000000 slope_coef_spread_DG_means_w 21.00000000000000000000 pdf_component_stdev_factor_w 1.00000000000000000000 coef_spread_DG_means_rt 0.80000000000000004441 coef_spread_DG_means_thl 0.80000000000000004441 gamma_coef 0.32000000000000000666 gamma_coefb 0.32000000000000000666 gamma_coefc 5.00000000000000000000 mu 0.00100000000000000002 beta 2.39999999999999991118 lmin_coef 0.50000000000000000000 omicron 0.50000000000000000000 zeta_vrnce_rat 0.00000000000000000000 upsilon_precip_frac_rat 0.55000000000000004441 lambda0_stability_coef 0.02999999999999999889 mult_coef 0.50000000000000000000 taumin 90.00000000000000000000 taumax 3600.00000000000000000000 Lscale_mu_coef 2.00000000000000000000 Lscale_pert_coef 0.10000000000000000555 alpha_corr 0.14999999999999999445 Skw_denom_coef 4.00000000000000000000 c_K10 1.00000000000000000000 c_K10h 1.00000000000000000000 thlp2_rad_coef 1.00000000000000000000 thlp2_rad_cloud_frac_thresh 0.10000000000000000555 up2_sfc_coef 2.00000000000000000000 Skw_max_mag 4.50000000000000000000 C_invrs_tau_bkgnd 1.10000000000000008882 C_invrs_tau_sfc 0.10000000000000000555 C_invrs_tau_shear 0.02000000000000000042 C_invrs_tau_N2 0.40000000000000002220 C_invrs_tau_N2_wp2 0.10000000000000000555 C_invrs_tau_N2_xp2 0.05000000000000000278 C_invrs_tau_N2_wpxp 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 1.00000000000000000000 C_invrs_tau_wpxp_Ri 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh 0.00033000000000000000 xp3_coef_base 0.25000000000000000000 xp3_coef_slope 0.01000000000000000021 altitude_threshold 100.00000000000000000000 rtp2_clip_coef 0.50000000000000000000 Cx_min 0.33000000000000001554 Cx_max 0.94999999999999995559 Richardson_num_min 0.25000000000000000000 Richardson_num_max 400.00000000000000000000 a3_coef_min 1.60000000000000008882 a_const 1.80000000000000004441 bv_efold 5.00000000000000000000 wpxp_Ri_exp 0.50000000000000000000 z_displace 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DCOAMPS_MICRO enabled -DTUNER disabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = bomex nzmax = 75 grid_type = 1 deltaz = 40.000000000000000 zm_init = 0.0000000000000000 zm_top = 3500.0000000000000 zt_grid_fname = zm_grid_fname = day = 22 month = 6 year = 1969 lat_vals = 15.000000000000000 lon_vals = -56.500000000000000 sfc_elevation = 0.0000000000000000 time_initial = 0.0000000000000000 time_final = 21600.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 0 T_sfc = 288.00000000000000 p_sfc = 101500.00000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 3.7599999999999999E-005 fcor_y = 1.4087062250470739E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = T l_modify_ic_with_cubic_int = T l_modify_bc_for_cnvg_test = T l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/bomex time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/ fname_prefix = bomex stats_output_filename = bomex_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 0.0000000000000000 stats_tend = 21600.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- µphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/bomex_corr_array_cloud.in and/or ../input/case_setups/bomex_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = simplified_bomex sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 100.00000000000000 F1 = 20.000000000000000 kappa = 119.00000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 1 penta_solve_method = 1 tridiag_solve_method = 1 grid_remap_method = 2 grid_adapt_in_time_method = 0 l_use_precip_frac = F l_predict_upwp_vpwp = F l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = F l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = T l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_vert_avg_closure = T l_trapezoidal_rule_zt = T l_trapezoidal_rule_zm = T l_call_pdf_closure_twice = T l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = T l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = T l_damp_wp2_using_em = F l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = F l_use_C7_Richardson = F l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = F l_damp_wp3_Skw_squared = F l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = F l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = F l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = T l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: bomex_sounding.in File exists? T Path to sclr_sounding: bomex_sclr_sounding.in File exists? T Path to edsclr_sounding: bomex_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 100.00000000000000 200.00000000000000 300.00000000000000 400.00000000000000 500.00000000000000 520.00000000000000 600.00000000000000 700.00000000000000 800.00000000000000 900.00000000000000 1000.0000000000000 1100.0000000000000 1200.0000000000000 1300.0000000000000 1400.0000000000000 1480.0000000000000 1500.0000000000000 1600.0000000000000 1700.0000000000000 1800.0000000000000 1900.0000000000000 2000.0000000000000 2099.9000000000001 2100.0000000000000 2200.0000000000000 2300.0000000000000 2400.0000000000000 2500.0000000000000 2600.0000000000000 2700.0000000000000 2800.0000000000000 2900.0000000000000 3000.0000000000000 3100.0000000000000 3200.0000000000000 3300.0000000000000 3400.0000000000000 3500.0000000000000 u = -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.5700000000000003 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1.1897692307692307E-002 1.1298974358974359E-002 1.0820000000000000E-002 1.0566153846153847E-002 9.2969230769230759E-003 8.0276923076923069E-003 6.7584615384615378E-003 5.4892307692307688E-003 4.2199999999999998E-003 4.0994539999999998E-003 4.0993333333333333E-003 3.9786666666666668E-003 3.8579999999999999E-003 3.7373333333333330E-003 3.6166666666666665E-003 3.4960000000000000E-003 3.3753333333333331E-003 3.2546666666666666E-003 3.1339999999999996E-003 3.0133333333333331E-003 2.8926666666666666E-003 2.7719999999999997E-003 2.6513333333333328E-003 2.5306666666666663E-003 2.4099999999999998E-003 p_in_Pa = -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 -4.3333331081081084E-004 -8.6666662162162168E-004 -1.2999999324324325E-003 -1.7333332432432434E-003 -2.1666665540540542E-003 -2.2533332162162165E-003 -2.5999998648648650E-003 -3.0333331756756759E-003 -3.4666664864864867E-003 -3.8999997972972975E-003 -4.3333331081081084E-003 -4.7666664189189188E-003 -5.1999997297297301E-003 -5.6333330405405405E-003 -6.0666663513513517E-003 -6.4133330000000002E-003 -6.4999999999999997E-003 -5.4166666111018502E-003 -4.3333332222037007E-003 -3.2499998333055508E-003 -2.1666664444074018E-003 -1.0833330555092523E-003 -1.0829999999998133E-006 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/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf01 =================== 2026/09/29 03:38:52 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 1.00000000000000000000 C1b 1.00000000000000000000 C1c 1.00000000000000000000 C2rt 1.00000000000000000000 C2thl 1.00000000000000000000 C2rtthl 2.00000000000000000000 C4 5.20000000000000017764 C_uu_shr 0.29999999999999998890 C_uu_buoy 0.29999999999999998890 C6rt 4.00000000000000000000 C6rtb 6.00000000000000000000 C6rtc 1.00000000000000000000 C6thl 4.00000000000000000000 C6thlb 6.00000000000000000000 C6thlc 1.00000000000000000000 C7 0.50000000000000000000 C7b 0.80000000000000004441 C7c 0.50000000000000000000 C8 3.00000000000000000000 C8b 0.00000000000000000000 C10 3.29999999999999982236 C11 0.80000000000000004441 C11b 0.34999999999999997780 C11c 0.50000000000000000000 C12 1.00000000000000000000 C13 0.10000000000000000555 C14 1.00000000000000000000 C_wp2_pr_dfsn 0.00000000000000000000 C_wp3_pr_tp 0.00000000000000000000 C_wp3_pr_turb 0.40000000000000002220 C_wp3_pr_dfsn 0.00000000000000000000 C_wp2_splat 0.00000000000000000000 C6rt_Lscale0 14.00000000000000000000 C6thl_Lscale0 14.00000000000000000000 C7_Lscale0 0.84999999999999997780 wpxp_L_thresh 60.00000000000000000000 c_K 0.20000000000000001110 c_K1 0.75000000000000000000 nu1 20.00000000000000000000 c_K2 0.12500000000000000000 nu2 5.00000000000000000000 c_K6 0.37500000000000000000 nu6 5.00000000000000000000 c_K8 1.25000000000000000000 nu8 20.00000000000000000000 c_K9 0.25000000000000000000 nu9 20.00000000000000000000 nu10 0.00000000000000000000 c_K_hm 0.75000000000000000000 c_K_hmb 0.75000000000000000000 K_hm_min_coef 0.10000000000000000555 nu_hm 1.50000000000000000000 slope_coef_spread_DG_means_w 21.00000000000000000000 pdf_component_stdev_factor_w 1.00000000000000000000 coef_spread_DG_means_rt 0.80000000000000004441 coef_spread_DG_means_thl 0.80000000000000004441 gamma_coef 0.32000000000000000666 gamma_coefb 0.32000000000000000666 gamma_coefc 5.00000000000000000000 mu 0.00100000000000000002 beta 2.39999999999999991118 lmin_coef 0.50000000000000000000 omicron 0.50000000000000000000 zeta_vrnce_rat 0.00000000000000000000 upsilon_precip_frac_rat 0.55000000000000004441 lambda0_stability_coef 0.02999999999999999889 mult_coef 0.50000000000000000000 taumin 90.00000000000000000000 taumax 3600.00000000000000000000 Lscale_mu_coef 2.00000000000000000000 Lscale_pert_coef 0.10000000000000000555 alpha_corr 0.14999999999999999445 Skw_denom_coef 4.00000000000000000000 c_K10 1.00000000000000000000 c_K10h 1.00000000000000000000 thlp2_rad_coef 1.00000000000000000000 thlp2_rad_cloud_frac_thresh 0.10000000000000000555 up2_sfc_coef 2.00000000000000000000 Skw_max_mag 4.50000000000000000000 C_invrs_tau_bkgnd 1.10000000000000008882 C_invrs_tau_sfc 0.10000000000000000555 C_invrs_tau_shear 0.02000000000000000042 C_invrs_tau_N2 0.40000000000000002220 C_invrs_tau_N2_wp2 0.10000000000000000555 C_invrs_tau_N2_xp2 0.05000000000000000278 C_invrs_tau_N2_wpxp 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 1.00000000000000000000 C_invrs_tau_wpxp_Ri 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh 0.00033000000000000000 xp3_coef_base 0.25000000000000000000 xp3_coef_slope 0.01000000000000000021 altitude_threshold 100.00000000000000000000 rtp2_clip_coef 0.50000000000000000000 Cx_min 0.33000000000000001554 Cx_max 0.94999999999999995559 Richardson_num_min 0.25000000000000000000 Richardson_num_max 400.00000000000000000000 a3_coef_min 1.60000000000000008882 a_const 1.80000000000000004441 bv_efold 5.00000000000000000000 wpxp_Ri_exp 0.50000000000000000000 z_displace 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DCOAMPS_MICRO enabled -DTUNER disabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = dycoms2_rf01 nzmax = 132 grid_type = 1 deltaz = 10.000000000000000 zm_init = 0.0000000000000000 zm_top = 5000.0000000000000 zt_grid_fname = zm_grid_fname = day = 10 month = 7 year = 2001 lat_vals = 31.500000000000000 lon_vals = -122.00000000000000 sfc_elevation = 0.0000000000000000 time_initial = 21600.000000000000 time_final = 36000.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 0 T_sfc = 288.00000000000000 p_sfc = 101700.00000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 7.6000000000000004E-005 fcor_y = 1.2434904156393063E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = T l_modify_ic_with_cubic_int = F l_modify_bc_for_cnvg_test = F l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/dycoms2_rf01 time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/ fname_prefix = dycoms2_rf01 stats_output_filename = dycoms2_rf01_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 21600.000000000000 stats_tend = 36000.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- µphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/dycoms2_rf01_corr_array_cloud.in and/or ../input/case_setups/dycoms2_rf01_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = simplified sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 70.000000000000000 F1 = 22.000000000000000 kappa = 85.000000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 1 penta_solve_method = 1 tridiag_solve_method = 1 grid_remap_method = 2 grid_adapt_in_time_method = 0 l_use_precip_frac = F l_predict_upwp_vpwp = F l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = F l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = T l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_vert_avg_closure = T l_trapezoidal_rule_zt = T l_trapezoidal_rule_zm = T l_call_pdf_closure_twice = T l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = T l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = T l_damp_wp2_using_em = F l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = F l_use_C7_Richardson = F l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = F l_damp_wp3_Skw_squared = F l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = F l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = F l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = T l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: dycoms2_rf01_sounding.in File exists? T Path to sclr_sounding: dycoms2_rf01_sclr_sounding.in File exists? T Path to edsclr_sounding: dycoms2_rf01_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 600.00000000000000 650.00000000000000 840.00000000000000 840.50000000000000 860.00000000000000 900.00000000000000 1000.0000000000000 1100.0000000000000 1200.0000000000000 1300.0000000000000 1400.0000000000000 1500.0000000000000 1600.0000000000000 1700.0000000000000 1800.0000000000000 2400.0000000000000 5000.0000000000000 u = 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 v = -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 ug = 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 vg = -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 theta = 289.00000000000000 289.00000000000000 289.00000000000000 289.00000000000000 297.50000000000000 300.20999999999998 301.41000000000003 302.93000000000001 303.88000000000000 304.61000000000001 305.22000000000003 305.74000000000001 306.19999999999999 306.62000000000000 307.22000000000003 307.81999999999999 311.42000000000002 327.01999999999998 rt = 8.9999999999999993E-003 8.9999999999999993E-003 8.9999999999999993E-003 8.9999999999999993E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 p_in_Pa = -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 -2.2500000000000003E-003 -2.4375000000000000E-003 -3.1500000000000000E-003 -3.1518749999999997E-003 -3.2250000000000000E-003 -3.3750000000000000E-003 -3.7499999999999999E-003 -4.1250000000000002E-003 -4.5000000000000005E-003 -4.8750000000000000E-003 -5.2500000000000003E-003 -5.6249999999999998E-003 -6.0000000000000001E-003 -5.2500000000000003E-003 -4.5000000000000005E-003 0.0000000000000000 0.0000000000000000 iteration: 1 / 240 -- time = 21660.0s / 36000.0s iteration: 2 / 240 -- time = 21720.0s / 36000.0s iteration: 3 / 240 -- time = 21780.0s / 36000.0s iteration: 4 / 240 -- time = 21840.0s / 36000.0s iteration: 5 / 240 -- time = 21900.0s / 36000.0s iteration: 6 / 240 -- time = 21960.0s / 36000.0s iteration: 7 / 240 -- time = 22020.0s / 36000.0s iteration: 8 / 240 -- time = 22080.0s / 36000.0s iteration: 9 / 240 -- time = 22140.0s / 36000.0s iteration: 10 / 240 -- time = 22200.0s / 36000.0s iteration: 11 / 240 -- time = 22260.0s / 36000.0s iteration: 12 / 240 -- time = 22320.0s / 36000.0s iteration: 13 / 240 -- time = 22380.0s / 36000.0s iteration: 14 / 240 -- time = 22440.0s / 36000.0s iteration: 15 / 240 -- time = 22500.0s / 36000.0s iteration: 16 / 240 -- time = 22560.0s / 36000.0s iteration: 17 / 240 -- time = 22620.0s / 36000.0s iteration: 18 / 240 -- time = 22680.0s / 36000.0s iteration: 19 / 240 -- time = 22740.0s / 36000.0s iteration: 20 / 240 -- time = 22800.0s / 36000.0s iteration: 21 / 240 -- time = 22860.0s / 36000.0s iteration: 22 / 240 -- time = 22920.0s / 36000.0s iteration: 23 / 240 -- time = 22980.0s / 36000.0s iteration: 24 / 240 -- time = 23040.0s / 36000.0s iteration: 25 / 240 -- time = 23100.0s / 36000.0s iteration: 26 / 240 -- time = 23160.0s / 36000.0s iteration: 27 / 240 -- time = 23220.0s / 36000.0s iteration: 28 / 240 -- time = 23280.0s / 36000.0s iteration: 29 / 240 -- time = 23340.0s / 36000.0s iteration: 30 / 240 -- time = 23400.0s / 36000.0s iteration: 31 / 240 -- time = 23460.0s / 36000.0s iteration: 32 / 240 -- time = 23520.0s / 36000.0s iteration: 33 / 240 -- time = 23580.0s / 36000.0s iteration: 34 / 240 -- time = 23640.0s / 36000.0s iteration: 35 / 240 -- time = 23700.0s / 36000.0s iteration: 36 / 240 -- time = 23760.0s / 36000.0s iteration: 37 / 240 -- time = 23820.0s / 36000.0s iteration: 38 / 240 -- time = 23880.0s / 36000.0s iteration: 39 / 240 -- time = 23940.0s / 36000.0s iteration: 40 / 240 -- time = 24000.0s / 36000.0s iteration: 41 / 240 -- time = 24060.0s / 36000.0s iteration: 42 / 240 -- time = 24120.0s / 36000.0s iteration: 43 / 240 -- time = 24180.0s / 36000.0s iteration: 44 / 240 -- time = 24240.0s / 36000.0s iteration: 45 / 240 -- time = 24300.0s / 36000.0s iteration: 46 / 240 -- time = 24360.0s / 36000.0s iteration: 47 / 240 -- time = 24420.0s / 36000.0s iteration: 48 / 240 -- time = 24480.0s / 36000.0s iteration: 49 / 240 -- time = 24540.0s / 36000.0s iteration: 50 / 240 -- time = 24600.0s / 36000.0s iteration: 51 / 240 -- time = 24660.0s / 36000.0s iteration: 52 / 240 -- time = 24720.0s / 36000.0s iteration: 53 / 240 -- time = 24780.0s / 36000.0s iteration: 54 / 240 -- time = 24840.0s / 36000.0s iteration: 55 / 240 -- time = 24900.0s / 36000.0s iteration: 56 / 240 -- time = 24960.0s / 36000.0s iteration: 57 / 240 -- time = 25020.0s / 36000.0s iteration: 58 / 240 -- time = 25080.0s / 36000.0s iteration: 59 / 240 -- time = 25140.0s / 36000.0s iteration: 60 / 240 -- time = 25200.0s / 36000.0s iteration: 61 / 240 -- time = 25260.0s / 36000.0s iteration: 62 / 240 -- time = 25320.0s / 36000.0s iteration: 63 / 240 -- time = 25380.0s / 36000.0s iteration: 64 / 240 -- time = 25440.0s / 36000.0s iteration: 65 / 240 -- time = 25500.0s / 36000.0s iteration: 66 / 240 -- time = 25560.0s / 36000.0s iteration: 67 / 240 -- time = 25620.0s / 36000.0s iteration: 68 / 240 -- time = 25680.0s / 36000.0s iteration: 69 / 240 -- time = 25740.0s / 36000.0s iteration: 70 / 240 -- time = 25800.0s / 36000.0s iteration: 71 / 240 -- time = 25860.0s / 36000.0s iteration: 72 / 240 -- time 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/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble about to cmnake /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Running CMake configure... [1/12] Building Fortran preprocessed src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90-pp.f90 [2/12] Generating Fortran dyndep file src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Fortran.dd [3/14] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90.o [4/12] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a [5/12] Linking Fortran executable src/clubb_thread_test [6/12] Linking Fortran executable src/G_unit_tests [7/12] Linking Fortran executable src/clubb_standalone [8/12] Linking Fortran executable src/clubb_loss_driver_test [9/12] Linking Fortran executable src/clubb_standalone_loss [10/12] Linking Fortran executable src/clubb_driver_test [11/12] Linking Fortran executable src/clubb_tuner [11/12] Install the project... -- Install configuration: "Debug" -- Up-to-date: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types [92mBuild completed successfully, and all source code checks passed.[0m /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/bomex.in Output directory: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output - using install dir (latest): /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble - using executable: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/run_scripts/../install/latest/clubb_standalone =================== Running bomex =================== 2026/09/29 03:39:06 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 1.00000000000000000000 C1b 1.00000000000000000000 C1c 1.00000000000000000000 C2rt 1.00000000000000000000 C2thl 1.00000000000000000000 C2rtthl 2.00000000000000000000 C4 5.20000000000000017764 C_uu_shr 0.29999999999999998890 C_uu_buoy 0.29999999999999998890 C6rt 4.00000000000000000000 C6rtb 6.00000000000000000000 C6rtc 1.00000000000000000000 C6thl 4.00000000000000000000 C6thlb 6.00000000000000000000 C6thlc 1.00000000000000000000 C7 0.50000000000000000000 C7b 0.80000000000000004441 C7c 0.50000000000000000000 C8 3.00000000000000000000 C8b 0.00000000000000000000 C10 3.29999999999999982236 C11 0.80000000000000004441 C11b 0.34999999999999997780 C11c 0.50000000000000000000 C12 1.00000000000000000000 C13 0.10000000000000000555 C14 1.00000000000000000000 C_wp2_pr_dfsn 0.00000000000000000000 C_wp3_pr_tp 0.00000000000000000000 C_wp3_pr_turb 0.40000000000000002220 C_wp3_pr_dfsn 0.00000000000000000000 C_wp2_splat 0.00000000000000000000 C6rt_Lscale0 14.00000000000000000000 C6thl_Lscale0 14.00000000000000000000 C7_Lscale0 0.84999999999999997780 wpxp_L_thresh 60.00000000000000000000 c_K 0.20000000000000001110 c_K1 0.75000000000000000000 nu1 20.00000000000000000000 c_K2 0.12500000000000000000 nu2 5.00000000000000000000 c_K6 0.37500000000000000000 nu6 5.00000000000000000000 c_K8 1.25000000000000000000 nu8 20.00000000000000000000 c_K9 0.25000000000000000000 nu9 20.00000000000000000000 nu10 0.00000000000000000000 c_K_hm 0.75000000000000000000 c_K_hmb 0.75000000000000000000 K_hm_min_coef 0.10000000000000000555 nu_hm 1.50000000000000000000 slope_coef_spread_DG_means_w 21.00000000000000000000 pdf_component_stdev_factor_w 1.00000000000000000000 coef_spread_DG_means_rt 0.80000000000000004441 coef_spread_DG_means_thl 0.80000000000000004441 gamma_coef 0.32000000000000000666 gamma_coefb 0.32000000000000000666 gamma_coefc 5.00000000000000000000 mu 0.00100000000000000002 beta 2.39999999999999991118 lmin_coef 0.50000000000000000000 omicron 0.50000000000000000000 zeta_vrnce_rat 0.00000000000000000000 upsilon_precip_frac_rat 0.55000000000000004441 lambda0_stability_coef 0.02999999999999999889 mult_coef 0.50000000000000000000 taumin 90.00000000000000000000 taumax 3600.00000000000000000000 Lscale_mu_coef 2.00000000000000000000 Lscale_pert_coef 0.10000000000000000555 alpha_corr 0.14999999999999999445 Skw_denom_coef 4.00000000000000000000 c_K10 1.00000000000000000000 c_K10h 1.00000000000000000000 thlp2_rad_coef 1.00000000000000000000 thlp2_rad_cloud_frac_thresh 0.10000000000000000555 up2_sfc_coef 2.00000000000000000000 Skw_max_mag 4.50000000000000000000 C_invrs_tau_bkgnd 1.10000000000000008882 C_invrs_tau_sfc 0.10000000000000000555 C_invrs_tau_shear 0.02000000000000000042 C_invrs_tau_N2 0.40000000000000002220 C_invrs_tau_N2_wp2 0.10000000000000000555 C_invrs_tau_N2_xp2 0.05000000000000000278 C_invrs_tau_N2_wpxp 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 1.00000000000000000000 C_invrs_tau_wpxp_Ri 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh 0.00033000000000000000 xp3_coef_base 0.25000000000000000000 xp3_coef_slope 0.01000000000000000021 altitude_threshold 100.00000000000000000000 rtp2_clip_coef 0.50000000000000000000 Cx_min 0.33000000000000001554 Cx_max 0.94999999999999995559 Richardson_num_min 0.25000000000000000000 Richardson_num_max 400.00000000000000000000 a3_coef_min 1.60000000000000008882 a_const 1.80000000000000004441 bv_efold 5.00000000000000000000 wpxp_Ri_exp 0.50000000000000000000 z_displace 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DCOAMPS_MICRO enabled -DTUNER disabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = bomex nzmax = 75 grid_type = 1 deltaz = 40.000000000000000 zm_init = 0.0000000000000000 zm_top = 3500.0000000000000 zt_grid_fname = zm_grid_fname = day = 22 month = 6 year = 1969 lat_vals = 15.000000000000000 lon_vals = -56.500000000000000 sfc_elevation = 0.0000000000000000 time_initial = 0.0000000000000000 time_final = 21600.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 0 T_sfc = 288.00000000000000 p_sfc = 101500.00000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 3.7599999999999999E-005 fcor_y = 1.4087062250470739E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = T l_modify_ic_with_cubic_int = T l_modify_bc_for_cnvg_test = T l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/bomex time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/ fname_prefix = bomex stats_output_filename = bomex_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 0.0000000000000000 stats_tend = 21600.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- µphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/bomex_corr_array_cloud.in and/or ../input/case_setups/bomex_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = simplified_bomex sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 100.00000000000000 F1 = 20.000000000000000 kappa = 119.00000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 1 penta_solve_method = 1 tridiag_solve_method = 1 grid_remap_method = 2 grid_adapt_in_time_method = 0 l_use_precip_frac = F l_predict_upwp_vpwp = F l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = F l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = T l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_vert_avg_closure = T l_trapezoidal_rule_zt = T l_trapezoidal_rule_zm = T l_call_pdf_closure_twice = T l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = T l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = T l_damp_wp2_using_em = F l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = F l_use_C7_Richardson = F l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = F l_damp_wp3_Skw_squared = F l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = F l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = F l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = T l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: bomex_sounding.in File exists? T Path to sclr_sounding: bomex_sclr_sounding.in File exists? T Path to edsclr_sounding: bomex_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 100.00000000000000 200.00000000000000 300.00000000000000 400.00000000000000 500.00000000000000 520.00000000000000 600.00000000000000 700.00000000000000 800.00000000000000 900.00000000000000 1000.0000000000000 1100.0000000000000 1200.0000000000000 1300.0000000000000 1400.0000000000000 1480.0000000000000 1500.0000000000000 1600.0000000000000 1700.0000000000000 1800.0000000000000 1900.0000000000000 2000.0000000000000 2099.9000000000001 2100.0000000000000 2200.0000000000000 2300.0000000000000 2400.0000000000000 2500.0000000000000 2600.0000000000000 2700.0000000000000 2800.0000000000000 2900.0000000000000 3000.0000000000000 3100.0000000000000 3200.0000000000000 3300.0000000000000 3400.0000000000000 3500.0000000000000 u = -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.5700000000000003 -8.3900000000000006 -8.2100000000000009 -8.0299999999999994 -7.8499999999999996 -7.6699999999999999 -7.4900000000000002 -7.3460000000000001 -7.3100000000000005 -7.1299999999999999 -6.9500000000000002 -6.7700000000000005 -6.5899999999999999 -6.4100000000000001 -6.2301799999999998 -6.2300000000000004 -6.0499999999999998 -5.8700000000000001 -5.6900000000000004 -5.5099999999999998 -5.3300000000000001 -5.1500000000000004 -4.9699999999999998 -4.7900000000000000 -4.6100000000000003 -4.4299999999999997 -4.2500000000000000 -4.0700000000000003 -3.8900000000000001 -3.7100000000000000 v = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 ug = -10.000000000000000 -9.8200000000000003 -9.6400000000000006 -9.4600000000000009 -9.2799999999999994 -9.0999999999999996 -9.0640000000000001 -8.9199999999999999 -8.7400000000000002 -8.5600000000000005 -8.3800000000000008 -8.1999999999999993 -8.0199999999999996 -7.8399999999999999 -7.6600000000000001 -7.4800000000000004 -7.3360000000000003 -7.3000000000000007 -7.1200000000000001 -6.9400000000000004 -6.7600000000000007 -6.5800000000000001 -6.4000000000000004 -6.2201800000000000 -6.2200000000000006 -6.0400000000000000 -5.8600000000000003 -5.6800000000000006 -5.5000000000000000 -5.3200000000000003 -5.1400000000000006 -4.9600000000000000 -4.7800000000000002 -4.6000000000000005 -4.4199999999999999 -4.2400000000000002 -4.0600000000000005 -3.8800000000000003 -3.7000000000000002 vg = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 theta = 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 299.00833333333333 299.39375000000001 299.77916666666670 300.16458333333333 300.55000000000001 300.93541666666664 301.32083333333333 301.70625000000001 302.09166666666664 302.39999999999998 302.63076923076920 303.78461538461534 304.93846153846152 306.09230769230766 307.24615384615385 308.39999999999998 308.75131499999998 308.75166666666667 309.10333333333330 309.45499999999998 309.80666666666667 310.15833333333330 310.50999999999999 310.86166666666668 311.21333333333331 311.56500000000000 311.91666666666669 312.26833333333332 312.62000000000000 312.97166666666669 313.32333333333332 313.67500000000001 rt = 1.7290000000000000E-002 1.7151538461538461E-002 1.7013076923076922E-002 1.6874615384615384E-002 1.6736153846153849E-002 1.6597692307692310E-002 1.6570000000000001E-002 1.6090000000000000E-002 1.5490000000000000E-002 1.4891282051282052E-002 1.4292564102564104E-002 1.3693846153846154E-002 1.3095128205128205E-002 1.2496410256410257E-002 1.1897692307692307E-002 1.1298974358974359E-002 1.0820000000000000E-002 1.0566153846153847E-002 9.2969230769230759E-003 8.0276923076923069E-003 6.7584615384615378E-003 5.4892307692307688E-003 4.2199999999999998E-003 4.0994539999999998E-003 4.0993333333333333E-003 3.9786666666666668E-003 3.8579999999999999E-003 3.7373333333333330E-003 3.6166666666666665E-003 3.4960000000000000E-003 3.3753333333333331E-003 3.2546666666666666E-003 3.1339999999999996E-003 3.0133333333333331E-003 2.8926666666666666E-003 2.7719999999999997E-003 2.6513333333333328E-003 2.5306666666666663E-003 2.4099999999999998E-003 p_in_Pa = -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 -4.3333331081081084E-004 -8.6666662162162168E-004 -1.2999999324324325E-003 -1.7333332432432434E-003 -2.1666665540540542E-003 -2.2533332162162165E-003 -2.5999998648648650E-003 -3.0333331756756759E-003 -3.4666664864864867E-003 -3.8999997972972975E-003 -4.3333331081081084E-003 -4.7666664189189188E-003 -5.1999997297297301E-003 -5.6333330405405405E-003 -6.0666663513513517E-003 -6.4133330000000002E-003 -6.4999999999999997E-003 -5.4166666111018502E-003 -4.3333332222037007E-003 -3.2499998333055508E-003 -2.1666664444074018E-003 -1.0833330555092523E-003 -1.0829999999998133E-006 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 iteration: 1 / 360 -- time = 60.0s / 21600.0s iteration: 2 / 360 -- time = 120.0s / 21600.0s iteration: 3 / 360 -- time = 180.0s / 21600.0s iteration: 4 / 360 -- time = 240.0s / 21600.0s iteration: 5 / 360 -- time = 300.0s / 21600.0s iteration: 6 / 360 -- time = 360.0s / 21600.0s iteration: 7 / 360 -- time = 420.0s / 21600.0s iteration: 8 / 360 -- time = 480.0s / 21600.0s iteration: 9 / 360 -- time = 540.0s / 21600.0s iteration: 10 / 360 -- time = 600.0s / 21600.0s iteration: 11 / 360 -- time = 660.0s / 21600.0s iteration: 12 / 360 -- time = 720.0s / 21600.0s iteration: 13 / 360 -- time = 780.0s / 21600.0s iteration: 14 / 360 -- time = 840.0s / 21600.0s iteration: 15 / 360 -- time = 900.0s / 21600.0s 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/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf01 =================== 2026/09/29 03:39:10 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 1.00000000000000000000 C1b 1.00000000000000000000 C1c 1.00000000000000000000 C2rt 1.00000000000000000000 C2thl 1.00000000000000000000 C2rtthl 2.00000000000000000000 C4 5.20000000000000017764 C_uu_shr 0.29999999999999998890 C_uu_buoy 0.29999999999999998890 C6rt 4.00000000000000000000 C6rtb 6.00000000000000000000 C6rtc 1.00000000000000000000 C6thl 4.00000000000000000000 C6thlb 6.00000000000000000000 C6thlc 1.00000000000000000000 C7 0.50000000000000000000 C7b 0.80000000000000004441 C7c 0.50000000000000000000 C8 3.00000000000000000000 C8b 0.00000000000000000000 C10 3.29999999999999982236 C11 0.80000000000000004441 C11b 0.34999999999999997780 C11c 0.50000000000000000000 C12 1.00000000000000000000 C13 0.10000000000000000555 C14 1.00000000000000000000 C_wp2_pr_dfsn 0.00000000000000000000 C_wp3_pr_tp 0.00000000000000000000 C_wp3_pr_turb 0.40000000000000002220 C_wp3_pr_dfsn 0.00000000000000000000 C_wp2_splat 0.00000000000000000000 C6rt_Lscale0 14.00000000000000000000 C6thl_Lscale0 14.00000000000000000000 C7_Lscale0 0.84999999999999997780 wpxp_L_thresh 60.00000000000000000000 c_K 0.20000000000000001110 c_K1 0.75000000000000000000 nu1 20.00000000000000000000 c_K2 0.12500000000000000000 nu2 5.00000000000000000000 c_K6 0.37500000000000000000 nu6 5.00000000000000000000 c_K8 1.25000000000000000000 nu8 20.00000000000000000000 c_K9 0.25000000000000000000 nu9 20.00000000000000000000 nu10 0.00000000000000000000 c_K_hm 0.75000000000000000000 c_K_hmb 0.75000000000000000000 K_hm_min_coef 0.10000000000000000555 nu_hm 1.50000000000000000000 slope_coef_spread_DG_means_w 21.00000000000000000000 pdf_component_stdev_factor_w 1.00000000000000000000 coef_spread_DG_means_rt 0.80000000000000004441 coef_spread_DG_means_thl 0.80000000000000004441 gamma_coef 0.32000000000000000666 gamma_coefb 0.32000000000000000666 gamma_coefc 5.00000000000000000000 mu 0.00100000000000000002 beta 2.39999999999999991118 lmin_coef 0.50000000000000000000 omicron 0.50000000000000000000 zeta_vrnce_rat 0.00000000000000000000 upsilon_precip_frac_rat 0.55000000000000004441 lambda0_stability_coef 0.02999999999999999889 mult_coef 0.50000000000000000000 taumin 90.00000000000000000000 taumax 3600.00000000000000000000 Lscale_mu_coef 2.00000000000000000000 Lscale_pert_coef 0.10000000000000000555 alpha_corr 0.14999999999999999445 Skw_denom_coef 4.00000000000000000000 c_K10 1.00000000000000000000 c_K10h 1.00000000000000000000 thlp2_rad_coef 1.00000000000000000000 thlp2_rad_cloud_frac_thresh 0.10000000000000000555 up2_sfc_coef 2.00000000000000000000 Skw_max_mag 4.50000000000000000000 C_invrs_tau_bkgnd 1.10000000000000008882 C_invrs_tau_sfc 0.10000000000000000555 C_invrs_tau_shear 0.02000000000000000042 C_invrs_tau_N2 0.40000000000000002220 C_invrs_tau_N2_wp2 0.10000000000000000555 C_invrs_tau_N2_xp2 0.05000000000000000278 C_invrs_tau_N2_wpxp 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 1.00000000000000000000 C_invrs_tau_wpxp_Ri 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh 0.00033000000000000000 xp3_coef_base 0.25000000000000000000 xp3_coef_slope 0.01000000000000000021 altitude_threshold 100.00000000000000000000 rtp2_clip_coef 0.50000000000000000000 Cx_min 0.33000000000000001554 Cx_max 0.94999999999999995559 Richardson_num_min 0.25000000000000000000 Richardson_num_max 400.00000000000000000000 a3_coef_min 1.60000000000000008882 a_const 1.80000000000000004441 bv_efold 5.00000000000000000000 wpxp_Ri_exp 0.50000000000000000000 z_displace 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DCOAMPS_MICRO enabled -DTUNER disabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = dycoms2_rf01 nzmax = 132 grid_type = 1 deltaz = 10.000000000000000 zm_init = 0.0000000000000000 zm_top = 5000.0000000000000 zt_grid_fname = zm_grid_fname = day = 10 month = 7 year = 2001 lat_vals = 31.500000000000000 lon_vals = -122.00000000000000 sfc_elevation = 0.0000000000000000 time_initial = 21600.000000000000 time_final = 36000.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 0 T_sfc = 288.00000000000000 p_sfc = 101700.00000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 7.6000000000000004E-005 fcor_y = 1.2434904156393063E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = T l_modify_ic_with_cubic_int = F l_modify_bc_for_cnvg_test = F l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/dycoms2_rf01 time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/ fname_prefix = dycoms2_rf01 stats_output_filename = dycoms2_rf01_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 21600.000000000000 stats_tend = 36000.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- µphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/dycoms2_rf01_corr_array_cloud.in and/or ../input/case_setups/dycoms2_rf01_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = simplified sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 70.000000000000000 F1 = 22.000000000000000 kappa = 85.000000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 1 penta_solve_method = 1 tridiag_solve_method = 1 grid_remap_method = 2 grid_adapt_in_time_method = 0 l_use_precip_frac = F l_predict_upwp_vpwp = F l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = F l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = T l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_vert_avg_closure = T l_trapezoidal_rule_zt = T l_trapezoidal_rule_zm = T l_call_pdf_closure_twice = T l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = T l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = T l_damp_wp2_using_em = F l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = F l_use_C7_Richardson = F l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = F l_damp_wp3_Skw_squared = F l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = F l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = F l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = T l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: dycoms2_rf01_sounding.in File exists? T Path to sclr_sounding: dycoms2_rf01_sclr_sounding.in File exists? T Path to edsclr_sounding: dycoms2_rf01_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 600.00000000000000 650.00000000000000 840.00000000000000 840.50000000000000 860.00000000000000 900.00000000000000 1000.0000000000000 1100.0000000000000 1200.0000000000000 1300.0000000000000 1400.0000000000000 1500.0000000000000 1600.0000000000000 1700.0000000000000 1800.0000000000000 2400.0000000000000 5000.0000000000000 u = 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 v = -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 ug = 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 vg = -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 theta = 289.00000000000000 289.00000000000000 289.00000000000000 289.00000000000000 297.50000000000000 300.20999999999998 301.41000000000003 302.93000000000001 303.88000000000000 304.61000000000001 305.22000000000003 305.74000000000001 306.19999999999999 306.62000000000000 307.22000000000003 307.81999999999999 311.42000000000002 327.01999999999998 rt = 8.9999999999999993E-003 8.9999999999999993E-003 8.9999999999999993E-003 8.9999999999999993E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 p_in_Pa = -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 -2.2500000000000003E-003 -2.4375000000000000E-003 -3.1500000000000000E-003 -3.1518749999999997E-003 -3.2250000000000000E-003 -3.3750000000000000E-003 -3.7499999999999999E-003 -4.1250000000000002E-003 -4.5000000000000005E-003 -4.8750000000000000E-003 -5.2500000000000003E-003 -5.6249999999999998E-003 -6.0000000000000001E-003 -5.2500000000000003E-003 -4.5000000000000005E-003 0.0000000000000000 0.0000000000000000 iteration: 1 / 240 -- time = 21660.0s / 36000.0s iteration: 2 / 240 -- time = 21720.0s / 36000.0s iteration: 3 / 240 -- time = 21780.0s / 36000.0s iteration: 4 / 240 -- time = 21840.0s / 36000.0s iteration: 5 / 240 -- time = 21900.0s / 36000.0s iteration: 6 / 240 -- time = 21960.0s / 36000.0s iteration: 7 / 240 -- time = 22020.0s / 36000.0s iteration: 8 / 240 -- time = 22080.0s / 36000.0s iteration: 9 / 240 -- time = 22140.0s / 36000.0s iteration: 10 / 240 -- time = 22200.0s / 36000.0s iteration: 11 / 240 -- time = 22260.0s / 36000.0s iteration: 12 / 240 -- time 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36000.0s iteration: 230 / 240 -- time = 35400.0s / 36000.0s iteration: 231 / 240 -- time = 35460.0s / 36000.0s iteration: 232 / 240 -- time = 35520.0s / 36000.0s iteration: 233 / 240 -- time = 35580.0s / 36000.0s iteration: 234 / 240 -- time = 35640.0s / 36000.0s iteration: 235 / 240 -- time = 35700.0s / 36000.0s iteration: 236 / 240 -- time = 35760.0s / 36000.0s iteration: 237 / 240 -- time = 35820.0s / 36000.0s iteration: 238 / 240 -- time = 35880.0s / 36000.0s iteration: 239 / 240 -- time = 35940.0s / 36000.0s iteration: 240 / 240 -- time = 36000.0s / 36000.0s Writing timing results to: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/dycoms2_rf01.timing Program exited normally -------------------------------------------------- run_scm.py total runtime: 6.85 s -------------------------------------------------- Directory 1 is a4826465aeec11af80e51e711d1cc0b8287e96c0 Directory 2 is 8f4f60104e839514cc8fa69801bebe0d1e26dfbb Using reporting threshold: 0.0 The following cases will be compared: ['bomex', 'dycoms2_rf01'] ================================================ bomex ================================================ >No differences detected by the linux diff in bomex_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case bomex.<<< ===================================================================================================== ================================================ dycoms2_rf01 ================================================ >No differences detected by the linux diff in dycoms2_rf01_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.<<< ===================================================================================================== SUMMARY: Linux diff did not detect any differences in the compared files. Pass: 2 cases ['bomex', 'dycoms2_rf01'] Fail: 0 cases [] -- Compiling with double precision -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble about to cmnake /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/build/gcc_DEBUG_PRECdouble Running CMake configure... [1/16] Building Fortran preprocessed src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90-pp.f90 [2/16] Building Fortran preprocessed src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90-pp.f90 [3/16] Generating Fortran dyndep file src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Fortran.dd [4/18] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90.o [5/16] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a [6/16] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd [7/17] Linking Fortran executable src/G_unit_tests [8/17] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/src/clubb_driver.F90:5539:76: 5539 | p_sfc, rtm_sfc, rtm, l_readiopdata, & !thlm_sfc, & | 1 Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument] [9/16] Linking Fortran static library src/libclubb_driver_lib.a [10/16] Linking Fortran executable src/clubb_thread_test [11/16] Linking Fortran executable src/clubb_standalone_loss [12/16] Linking Fortran executable src/clubb_loss_driver_test [13/16] Linking Fortran executable src/clubb_standalone [14/16] Linking Fortran executable src/clubb_tuner [15/16] Linking Fortran executable src/clubb_driver_test [15/16] Install the project... -- Install configuration: "Debug" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types [92mBuild completed successfully, and all source code checks passed.[0m /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/bomex.in Output directory: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output - using install dir (latest): /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/install/gcc_DEBUG_PRECdouble - using executable: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/run_scripts/../install/latest/clubb_standalone =================== Running bomex =================== 2026/09/29 03:39:27 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 1.00000000000000000000 C1b 1.00000000000000000000 C1c 1.00000000000000000000 C2rt 1.00000000000000000000 C2thl 1.00000000000000000000 C2rtthl 2.00000000000000000000 C4 5.20000000000000017764 C_uu_shr 0.29999999999999998890 C_uu_buoy 0.29999999999999998890 C6rt 4.00000000000000000000 C6rtb 6.00000000000000000000 C6rtc 1.00000000000000000000 C6thl 4.00000000000000000000 C6thlb 6.00000000000000000000 C6thlc 1.00000000000000000000 C7 0.50000000000000000000 C7b 0.80000000000000004441 C7c 0.50000000000000000000 C8 3.00000000000000000000 C8b 0.00000000000000000000 C10 3.29999999999999982236 C11 0.80000000000000004441 C11b 0.34999999999999997780 C11c 0.50000000000000000000 C12 1.00000000000000000000 C13 0.10000000000000000555 C14 1.00000000000000000000 C_wp2_pr_dfsn 0.00000000000000000000 C_wp3_pr_tp 0.00000000000000000000 C_wp3_pr_turb 0.40000000000000002220 C_wp3_pr_dfsn 0.00000000000000000000 C_wp2_splat 0.00000000000000000000 C6rt_Lscale0 14.00000000000000000000 C6thl_Lscale0 14.00000000000000000000 C7_Lscale0 0.84999999999999997780 wpxp_L_thresh 60.00000000000000000000 c_K 0.20000000000000001110 c_K1 0.75000000000000000000 nu1 20.00000000000000000000 c_K2 0.12500000000000000000 nu2 5.00000000000000000000 c_K6 0.37500000000000000000 nu6 5.00000000000000000000 c_K8 1.25000000000000000000 nu8 20.00000000000000000000 c_K9 0.25000000000000000000 nu9 20.00000000000000000000 nu10 0.00000000000000000000 c_K_hm 0.75000000000000000000 c_K_hmb 0.75000000000000000000 K_hm_min_coef 0.10000000000000000555 nu_hm 1.50000000000000000000 slope_coef_spread_DG_means_w 21.00000000000000000000 pdf_component_stdev_factor_w 1.00000000000000000000 coef_spread_DG_means_rt 0.80000000000000004441 coef_spread_DG_means_thl 0.80000000000000004441 gamma_coef 0.32000000000000000666 gamma_coefb 0.32000000000000000666 gamma_coefc 5.00000000000000000000 mu 0.00100000000000000002 beta 2.39999999999999991118 lmin_coef 0.50000000000000000000 omicron 0.50000000000000000000 zeta_vrnce_rat 0.00000000000000000000 upsilon_precip_frac_rat 0.55000000000000004441 lambda0_stability_coef 0.02999999999999999889 mult_coef 0.50000000000000000000 taumin 90.00000000000000000000 taumax 3600.00000000000000000000 Lscale_mu_coef 2.00000000000000000000 Lscale_pert_coef 0.10000000000000000555 alpha_corr 0.14999999999999999445 Skw_denom_coef 4.00000000000000000000 c_K10 1.00000000000000000000 c_K10h 1.00000000000000000000 thlp2_rad_coef 1.00000000000000000000 thlp2_rad_cloud_frac_thresh 0.10000000000000000555 up2_sfc_coef 2.00000000000000000000 Skw_max_mag 4.50000000000000000000 C_invrs_tau_bkgnd 1.10000000000000008882 C_invrs_tau_sfc 0.10000000000000000555 C_invrs_tau_shear 0.02000000000000000042 C_invrs_tau_N2 0.40000000000000002220 C_invrs_tau_N2_wp2 0.10000000000000000555 C_invrs_tau_N2_xp2 0.05000000000000000278 C_invrs_tau_N2_wpxp 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 1.00000000000000000000 C_invrs_tau_wpxp_Ri 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh 0.00033000000000000000 xp3_coef_base 0.25000000000000000000 xp3_coef_slope 0.01000000000000000021 altitude_threshold 100.00000000000000000000 rtp2_clip_coef 0.50000000000000000000 Cx_min 0.33000000000000001554 Cx_max 0.94999999999999995559 Richardson_num_min 0.25000000000000000000 Richardson_num_max 400.00000000000000000000 a3_coef_min 1.60000000000000008882 a_const 1.80000000000000004441 bv_efold 5.00000000000000000000 wpxp_Ri_exp 0.50000000000000000000 z_displace 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DCOAMPS_MICRO enabled -DTUNER disabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = bomex nzmax = 75 grid_type = 1 deltaz = 40.000000000000000 zm_init = 0.0000000000000000 zm_top = 3500.0000000000000 zt_grid_fname = zm_grid_fname = day = 22 month = 6 year = 1969 lat_vals = 15.000000000000000 lon_vals = -56.500000000000000 sfc_elevation = 0.0000000000000000 time_initial = 0.0000000000000000 time_final = 21600.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 0 T_sfc = 288.00000000000000 p_sfc = 101500.00000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 3.7599999999999999E-005 fcor_y = 1.4087062250470739E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = T l_modify_ic_with_cubic_int = T l_modify_bc_for_cnvg_test = T l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/bomex time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/ fname_prefix = bomex stats_output_filename = bomex_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 0.0000000000000000 stats_tend = 21600.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- µphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/bomex_corr_array_cloud.in and/or ../input/case_setups/bomex_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = simplified_bomex sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 100.00000000000000 F1 = 20.000000000000000 kappa = 119.00000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 1 penta_solve_method = 1 tridiag_solve_method = 1 grid_remap_method = 2 grid_adapt_in_time_method = 0 l_use_precip_frac = F l_predict_upwp_vpwp = F l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = F l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = T l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_vert_avg_closure = T l_trapezoidal_rule_zt = T l_trapezoidal_rule_zm = T l_call_pdf_closure_twice = T l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = T l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = T l_damp_wp2_using_em = F l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = F l_use_C7_Richardson = F l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = F l_damp_wp3_Skw_squared = F l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = F l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = F l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = T l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: bomex_sounding.in File exists? T Path to sclr_sounding: bomex_sclr_sounding.in File exists? T Path to edsclr_sounding: bomex_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 100.00000000000000 200.00000000000000 300.00000000000000 400.00000000000000 500.00000000000000 520.00000000000000 600.00000000000000 700.00000000000000 800.00000000000000 900.00000000000000 1000.0000000000000 1100.0000000000000 1200.0000000000000 1300.0000000000000 1400.0000000000000 1480.0000000000000 1500.0000000000000 1600.0000000000000 1700.0000000000000 1800.0000000000000 1900.0000000000000 2000.0000000000000 2099.9000000000001 2100.0000000000000 2200.0000000000000 2300.0000000000000 2400.0000000000000 2500.0000000000000 2600.0000000000000 2700.0000000000000 2800.0000000000000 2900.0000000000000 3000.0000000000000 3100.0000000000000 3200.0000000000000 3300.0000000000000 3400.0000000000000 3500.0000000000000 u = -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.5700000000000003 -8.3900000000000006 -8.2100000000000009 -8.0299999999999994 -7.8499999999999996 -7.6699999999999999 -7.4900000000000002 -7.3460000000000001 -7.3100000000000005 -7.1299999999999999 -6.9500000000000002 -6.7700000000000005 -6.5899999999999999 -6.4100000000000001 -6.2301799999999998 -6.2300000000000004 -6.0499999999999998 -5.8700000000000001 -5.6900000000000004 -5.5099999999999998 -5.3300000000000001 -5.1500000000000004 -4.9699999999999998 -4.7900000000000000 -4.6100000000000003 -4.4299999999999997 -4.2500000000000000 -4.0700000000000003 -3.8900000000000001 -3.7100000000000000 v = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 ug = -10.000000000000000 -9.8200000000000003 -9.6400000000000006 -9.4600000000000009 -9.2799999999999994 -9.0999999999999996 -9.0640000000000001 -8.9199999999999999 -8.7400000000000002 -8.5600000000000005 -8.3800000000000008 -8.1999999999999993 -8.0199999999999996 -7.8399999999999999 -7.6600000000000001 -7.4800000000000004 -7.3360000000000003 -7.3000000000000007 -7.1200000000000001 -6.9400000000000004 -6.7600000000000007 -6.5800000000000001 -6.4000000000000004 -6.2201800000000000 -6.2200000000000006 -6.0400000000000000 -5.8600000000000003 -5.6800000000000006 -5.5000000000000000 -5.3200000000000003 -5.1400000000000006 -4.9600000000000000 -4.7800000000000002 -4.6000000000000005 -4.4199999999999999 -4.2400000000000002 -4.0600000000000005 -3.8800000000000003 -3.7000000000000002 vg = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 theta = 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 299.00833333333333 299.39375000000001 299.77916666666670 300.16458333333333 300.55000000000001 300.93541666666664 301.32083333333333 301.70625000000001 302.09166666666664 302.39999999999998 302.63076923076920 303.78461538461534 304.93846153846152 306.09230769230766 307.24615384615385 308.39999999999998 308.75131499999998 308.75166666666667 309.10333333333330 309.45499999999998 309.80666666666667 310.15833333333330 310.50999999999999 310.86166666666668 311.21333333333331 311.56500000000000 311.91666666666669 312.26833333333332 312.62000000000000 312.97166666666669 313.32333333333332 313.67500000000001 rt = 1.7290000000000000E-002 1.7151538461538461E-002 1.7013076923076922E-002 1.6874615384615384E-002 1.6736153846153849E-002 1.6597692307692310E-002 1.6570000000000001E-002 1.6090000000000000E-002 1.5490000000000000E-002 1.4891282051282052E-002 1.4292564102564104E-002 1.3693846153846154E-002 1.3095128205128205E-002 1.2496410256410257E-002 1.1897692307692307E-002 1.1298974358974359E-002 1.0820000000000000E-002 1.0566153846153847E-002 9.2969230769230759E-003 8.0276923076923069E-003 6.7584615384615378E-003 5.4892307692307688E-003 4.2199999999999998E-003 4.0994539999999998E-003 4.0993333333333333E-003 3.9786666666666668E-003 3.8579999999999999E-003 3.7373333333333330E-003 3.6166666666666665E-003 3.4960000000000000E-003 3.3753333333333331E-003 3.2546666666666666E-003 3.1339999999999996E-003 3.0133333333333331E-003 2.8926666666666666E-003 2.7719999999999997E-003 2.6513333333333328E-003 2.5306666666666663E-003 2.4099999999999998E-003 p_in_Pa = -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 -4.3333331081081084E-004 -8.6666662162162168E-004 -1.2999999324324325E-003 -1.7333332432432434E-003 -2.1666665540540542E-003 -2.2533332162162165E-003 -2.5999998648648650E-003 -3.0333331756756759E-003 -3.4666664864864867E-003 -3.8999997972972975E-003 -4.3333331081081084E-003 -4.7666664189189188E-003 -5.1999997297297301E-003 -5.6333330405405405E-003 -6.0666663513513517E-003 -6.4133330000000002E-003 -6.4999999999999997E-003 -5.4166666111018502E-003 -4.3333332222037007E-003 -3.2499998333055508E-003 -2.1666664444074018E-003 -1.0833330555092523E-003 -1.0829999999998133E-006 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/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf01 =================== 2026/09/29 03:39:30 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 1.00000000000000000000 C1b 1.00000000000000000000 C1c 1.00000000000000000000 C2rt 1.00000000000000000000 C2thl 1.00000000000000000000 C2rtthl 2.00000000000000000000 C4 5.20000000000000017764 C_uu_shr 0.29999999999999998890 C_uu_buoy 0.29999999999999998890 C6rt 4.00000000000000000000 C6rtb 6.00000000000000000000 C6rtc 1.00000000000000000000 C6thl 4.00000000000000000000 C6thlb 6.00000000000000000000 C6thlc 1.00000000000000000000 C7 0.50000000000000000000 C7b 0.80000000000000004441 C7c 0.50000000000000000000 C8 3.00000000000000000000 C8b 0.00000000000000000000 C10 3.29999999999999982236 C11 0.80000000000000004441 C11b 0.34999999999999997780 C11c 0.50000000000000000000 C12 1.00000000000000000000 C13 0.10000000000000000555 C14 1.00000000000000000000 C_wp2_pr_dfsn 0.00000000000000000000 C_wp3_pr_tp 0.00000000000000000000 C_wp3_pr_turb 0.40000000000000002220 C_wp3_pr_dfsn 0.00000000000000000000 C_wp2_splat 0.00000000000000000000 C6rt_Lscale0 14.00000000000000000000 C6thl_Lscale0 14.00000000000000000000 C7_Lscale0 0.84999999999999997780 wpxp_L_thresh 60.00000000000000000000 c_K 0.20000000000000001110 c_K1 0.75000000000000000000 nu1 20.00000000000000000000 c_K2 0.12500000000000000000 nu2 5.00000000000000000000 c_K6 0.37500000000000000000 nu6 5.00000000000000000000 c_K8 1.25000000000000000000 nu8 20.00000000000000000000 c_K9 0.25000000000000000000 nu9 20.00000000000000000000 nu10 0.00000000000000000000 c_K_hm 0.75000000000000000000 c_K_hmb 0.75000000000000000000 K_hm_min_coef 0.10000000000000000555 nu_hm 1.50000000000000000000 slope_coef_spread_DG_means_w 21.00000000000000000000 pdf_component_stdev_factor_w 1.00000000000000000000 coef_spread_DG_means_rt 0.80000000000000004441 coef_spread_DG_means_thl 0.80000000000000004441 gamma_coef 0.32000000000000000666 gamma_coefb 0.32000000000000000666 gamma_coefc 5.00000000000000000000 mu 0.00100000000000000002 beta 2.39999999999999991118 lmin_coef 0.50000000000000000000 omicron 0.50000000000000000000 zeta_vrnce_rat 0.00000000000000000000 upsilon_precip_frac_rat 0.55000000000000004441 lambda0_stability_coef 0.02999999999999999889 mult_coef 0.50000000000000000000 taumin 90.00000000000000000000 taumax 3600.00000000000000000000 Lscale_mu_coef 2.00000000000000000000 Lscale_pert_coef 0.10000000000000000555 alpha_corr 0.14999999999999999445 Skw_denom_coef 4.00000000000000000000 c_K10 1.00000000000000000000 c_K10h 1.00000000000000000000 thlp2_rad_coef 1.00000000000000000000 thlp2_rad_cloud_frac_thresh 0.10000000000000000555 up2_sfc_coef 2.00000000000000000000 Skw_max_mag 4.50000000000000000000 C_invrs_tau_bkgnd 1.10000000000000008882 C_invrs_tau_sfc 0.10000000000000000555 C_invrs_tau_shear 0.02000000000000000042 C_invrs_tau_N2 0.40000000000000002220 C_invrs_tau_N2_wp2 0.10000000000000000555 C_invrs_tau_N2_xp2 0.05000000000000000278 C_invrs_tau_N2_wpxp 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 1.00000000000000000000 C_invrs_tau_wpxp_Ri 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh 0.00033000000000000000 xp3_coef_base 0.25000000000000000000 xp3_coef_slope 0.01000000000000000021 altitude_threshold 100.00000000000000000000 rtp2_clip_coef 0.50000000000000000000 Cx_min 0.33000000000000001554 Cx_max 0.94999999999999995559 Richardson_num_min 0.25000000000000000000 Richardson_num_max 400.00000000000000000000 a3_coef_min 1.60000000000000008882 a_const 1.80000000000000004441 bv_efold 5.00000000000000000000 wpxp_Ri_exp 0.50000000000000000000 z_displace 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DCOAMPS_MICRO enabled -DTUNER disabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = dycoms2_rf01 nzmax = 132 grid_type = 1 deltaz = 10.000000000000000 zm_init = 0.0000000000000000 zm_top = 5000.0000000000000 zt_grid_fname = zm_grid_fname = day = 10 month = 7 year = 2001 lat_vals = 31.500000000000000 lon_vals = -122.00000000000000 sfc_elevation = 0.0000000000000000 time_initial = 21600.000000000000 time_final = 36000.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 0 T_sfc = 288.00000000000000 p_sfc = 101700.00000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 7.6000000000000004E-005 fcor_y = 1.2434904156393063E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = T l_modify_ic_with_cubic_int = F l_modify_bc_for_cnvg_test = F l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/dycoms2_rf01 time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/output/ fname_prefix = dycoms2_rf01 stats_output_filename = dycoms2_rf01_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 21600.000000000000 stats_tend = 36000.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- µphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/dycoms2_rf01_corr_array_cloud.in and/or ../input/case_setups/dycoms2_rf01_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = simplified sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 70.000000000000000 F1 = 22.000000000000000 kappa = 85.000000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 1 penta_solve_method = 1 tridiag_solve_method = 1 grid_remap_method = 2 grid_adapt_in_time_method = 0 l_use_precip_frac = F l_predict_upwp_vpwp = F l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = F l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = T l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_vert_avg_closure = T l_trapezoidal_rule_zt = T l_trapezoidal_rule_zm = T l_call_pdf_closure_twice = T l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = T l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = T l_damp_wp2_using_em = F l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = F l_use_C7_Richardson = F l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = F l_damp_wp3_Skw_squared = F l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = F l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = F l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = T l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: dycoms2_rf01_sounding.in File exists? T Path to sclr_sounding: dycoms2_rf01_sclr_sounding.in File exists? T Path to edsclr_sounding: dycoms2_rf01_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 600.00000000000000 650.00000000000000 840.00000000000000 840.50000000000000 860.00000000000000 900.00000000000000 1000.0000000000000 1100.0000000000000 1200.0000000000000 1300.0000000000000 1400.0000000000000 1500.0000000000000 1600.0000000000000 1700.0000000000000 1800.0000000000000 2400.0000000000000 5000.0000000000000 u = 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 v = -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 ug = 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 7.0000000000000000 vg = -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 -5.5000000000000000 theta = 289.00000000000000 289.00000000000000 289.00000000000000 289.00000000000000 297.50000000000000 300.20999999999998 301.41000000000003 302.93000000000001 303.88000000000000 304.61000000000001 305.22000000000003 305.74000000000001 306.19999999999999 306.62000000000000 307.22000000000003 307.81999999999999 311.42000000000002 327.01999999999998 rt = 8.9999999999999993E-003 8.9999999999999993E-003 8.9999999999999993E-003 8.9999999999999993E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 1.5000000000000000E-003 p_in_Pa = -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 -2.2500000000000003E-003 -2.4375000000000000E-003 -3.1500000000000000E-003 -3.1518749999999997E-003 -3.2250000000000000E-003 -3.3750000000000000E-003 -3.7499999999999999E-003 -4.1250000000000002E-003 -4.5000000000000005E-003 -4.8750000000000000E-003 -5.2500000000000003E-003 -5.6249999999999998E-003 -6.0000000000000001E-003 -5.2500000000000003E-003 -4.5000000000000005E-003 0.0000000000000000 0.0000000000000000 iteration: 1 / 240 -- time = 21660.0s / 36000.0s iteration: 2 / 240 -- time = 21720.0s / 36000.0s iteration: 3 / 240 -- time = 21780.0s / 36000.0s iteration: 4 / 240 -- time = 21840.0s / 36000.0s iteration: 5 / 240 -- time = 21900.0s / 36000.0s iteration: 6 / 240 -- time = 21960.0s / 36000.0s iteration: 7 / 240 -- time = 22020.0s / 36000.0s iteration: 8 / 240 -- time = 22080.0s / 36000.0s iteration: 9 / 240 -- time = 22140.0s / 36000.0s iteration: 10 / 240 -- time = 22200.0s / 36000.0s iteration: 11 / 240 -- time = 22260.0s / 36000.0s iteration: 12 / 240 -- time 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cases will be compared: ['bomex', 'dycoms2_rf01'] ================================================ bomex ================================================ >No differences detected by the linux diff in bomex_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case bomex.<<< ===================================================================================================== ================================================ dycoms2_rf01 ================================================ >No differences detected by the linux diff in dycoms2_rf01_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.<<< ===================================================================================================== SUMMARY: Linux diff did not detect any differences in the compared files. Pass: 2 cases ['bomex', 'dycoms2_rf01'] Fail: 0 cases [] =============================== Configuring Test =============================== Working directory set to: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test Checking specified repo: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test Using /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test with origin https://github.com/larson-group/clubb.git Output Save Mode: none Using branch: master Making list from 'UnresolvedCommits': CheckRange = True: Getting commit range Run Output Path: output Run commands: ['python compile.py -debug', '\nrm -rf output', 'mkdir output', '\npython run_scripts/run_scm.py -config compatible_r8029 bomex', '\npython run_scripts/run_scm.py -config compatible_r8029 dycoms2_rf01'] Diffing command: python3 run_scripts/run_bindiff_all.py =============================== Running Test =============================== Parsing message from commit: a4826465aeec11af80e51e711d1cc0b8287e96c0 Found: BIT_CHANGING Parsing message from commit: 89be3d5fd401ed3393a0a251b98752e552010ab9 Checking Commit: a4826465aeec11af80e51e711d1cc0b8287e96c0 Checking out a4826465aeec11af80e51e711d1cc0b8287e96c0 Running: 'python compile.py -debug' Running: 'rm -rf output' Running: 'mkdir output' Running: 'python run_scripts/run_scm.py -config compatible_r8029 bomex' Running: 'python run_scripts/run_scm.py -config compatible_r8029 dycoms2_rf01' Checking out 8f4f60104e839514cc8fa69801bebe0d1e26dfbb Running: 'python compile.py -debug' Running: 'rm -rf output' Running: 'mkdir output' Running: 'python run_scripts/run_scm.py -config compatible_r8029 bomex' Running: 'python run_scripts/run_scm.py -config compatible_r8029 dycoms2_rf01' Diffing: 'python3 run_scripts/run_bindiff_all.py a4826465aeec11af80e51e711d1cc0b8287e96c0 8f4f60104e839514cc8fa69801bebe0d1e26dfbb' WARNING: commit 'a4826465aeec11af80e51e711d1cc0b8287e96c0' was supposed to be BIT_CHANGING, but is not. Checking Commit: 89be3d5fd401ed3393a0a251b98752e552010ab9 Running: final commit to check, not labelled BIT_CHANGING Checking out 89be3d5fd401ed3393a0a251b98752e552010ab9 Running: 'python compile.py -debug' Running: 'rm -rf output' Running: 'mkdir output' Running: 'python run_scripts/run_scm.py -config compatible_r8029 bomex' Running: 'python run_scripts/run_scm.py -config compatible_r8029 dycoms2_rf01' Output from 8f4f60104e839514cc8fa69801bebe0d1e26dfbb already saved Diffing: 'python3 run_scripts/run_bindiff_all.py 89be3d5fd401ed3393a0a251b98752e552010ab9 8f4f60104e839514cc8fa69801bebe0d1e26dfbb' =============================== Test Results =============================== Commit Range Checked = 8f4f60104e839514cc8fa69801bebe0d1e26dfbb...89be3d5fd401ed3393a0a251b98752e552010ab9 No new Unresolved commits found. Fake BIT_CHANGING Commits: a4826465aeec11af80e51e711d1cc0b8287e96c0 No remaining Unresolved Commits. =============================== Updating Config File =============================== Saving into UnresolvedCommits: Saving into BaselineCommit: 89be3d5fd401ed3393a0a251b98752e552010ab9 =============================== Cleanup =============================== Removing all generated output REMOVING: 8f4f60104e839514cc8fa69801bebe0d1e26dfbb REMOVING: a4826465aeec11af80e51e711d1cc0b8287e96c0 REMOVING: 89be3d5fd401ed3393a0a251b98752e552010ab9 ================== Unresolved Commit Status ================== No remaining Unresolved Commits. Exiting with code: 0 [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS