Started by user Daniel Ebel Obtained jenkins_tests/clubb_BFB_gfortran_test/Jenkinsfile from git https://github.com/larson-group/clubb.git [Pipeline] Start of Pipeline [Pipeline] node Running on Jenkins in /home/jenkins/workspace/clubb_BFB_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_BFB_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' using GIT_ASKPASS to set credentials larsongroupsysadmin github token > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision a8c952996409f8c94d6a28714171145ed7d2c2ae (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f a8c952996409f8c94d6a28714171145ed7d2c2ae # timeout=10 Commit message: "Fixed bug in cubic equation solve function. Only relevant if pdf is L… (#1387)" > git rev-list --no-walk a8c952996409f8c94d6a28714171145ed7d2c2ae # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Update sys_admin Repo) [Pipeline] sh + git -C /home/pub/jenkins_BFB_test_configs/sys_admin pull Already up to date. [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv, netcdf-c/4.9.2, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_gfortran_test_config -- The Fortran compiler identification is GNU 13.1.0 -- The C compiler identification is GNU 13.1.0 -- The CXX compiler identification is GNU 13.1.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran - skipped -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Compiling with double precision -- Performing Test NETCDF_ABI_COMPATIBLE -- Performing Test NETCDF_ABI_COMPATIBLE - Success -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_BFB_gfortran_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble about to cmnake /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Running CMake configure... 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Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mean_adv.F90.o [630/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Skx_module.F90.o [631/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/tridiag_lu_solver.F90.o [632/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_roots.F90.o [633/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/LY93_pdf.F90.o [634/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/code_timer_module.F90.o [635/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diagnose_correlations_module.F90.o [636/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_operations.F90.o [637/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_tsdadg_pdf.F90.o [638/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_lu_solver.F90.o [639/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_bicgstab_solver.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/CLUBB_core/penta_bicgstab_solver.F90:140:10: 140 | if ( norm_rhs == 0.0) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] [640/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_wrap.F90.o [641/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/corr_varnce_module.F90.o [642/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/index_mapping.F90.o [643/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_solver_wrapper.F90.o [644/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_class.F90.o [645/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/adg1_adg2_3d_luhar_pdf.F90.o [646/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sigma_sqd_w_module.F90.o [647/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sponge_layer_damping.F90.o [648/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/saturation.F90.o [649/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_pressure.F90.o [650/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pos_definite_module.F90.o [651/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/turbulent_adv_pdf.F90.o [652/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diffusion.F90.o [653/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf.F90.o [654/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/remapping_module.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/CLUBB_core/remapping_module.F90:1212:43: 1212 | if(f(i,k+1)*f(i,k-1) 8) in loop beginning at (2) [-Wdo-subscript] [784/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o [785/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o [786/923] Linking Fortran static library src/SILHS/libsilhs_lib.a [787/923] Generating Fortran dyndep file src/Radiation/CMakeFiles/radiation_lib.dir/Fortran.dd [788/923] Generating Fortran dyndep file src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/Fortran.dd [789/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o [790/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o [791/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o [792/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o [793/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o [794/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o [795/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o [796/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o [797/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o [798/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o [799/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o [800/923] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o [801/923] Linking Fortran static library src/Microphys/Morrison_microphys/libmorrison_microphys_lib.a [802/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o [803/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o [804/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o [805/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o [806/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Numerical_recipes/ran_state.f90:8:59: 8 | INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1 | 1 Warning: Integer outside symmetric range implied by Standard Fortran at (1) [807/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o [808/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o [809/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o [810/923] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a [811/923] Linking Fortran static library src/Radiation/libradiation_lib.a [812/923] Generating Fortran dyndep file src/Input_fields/CMakeFiles/input_fields_lib.dir/Fortran.dd [813/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o [814/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o [815/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o [816/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o [817/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o [818/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] [819/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o [820/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o [821/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o [822/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1038:15: 1038 | if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1040:15: 1040 | if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1042:15: 1042 | if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1045:15: 1045 | if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1047:15: 1047 | if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1049:15: 1049 | if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:356:13: 356 | if( ANY(Ts_in == 0.0) ) then | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:620:12: 620 | if(T_in(i,nlev+1)/=missing_value) then | 1 Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:636:12: 636 | if(T_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:638:12: 638 | if(q_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:640:12: 640 | if(u_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:642:12: 642 | if(v_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:647:15: 647 | if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:651:15: 651 | if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:658:12: 658 | if(ug_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:660:12: 660 | if(vg_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1252:42: 1252 | character dim_name*( NF90_MAX_NAME ) | 1 Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1254:33: 1254 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1254:43: 1254 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1254:46: 1254 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'i' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1237:60: 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, & | 1 Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1237:54: 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, & | 1 Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1238:23: 1238 | var, use_NF90_REAL, status, required) | 1 Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:1167:67: 1167 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, & | 1 Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:751:51: 751 | get_add_surface_data, ntime, & | 1 Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:750:81: 750 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, & | 1 Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:290:32: 290 | integer :: STATUS, i, n, nlat, nlon | 1 Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:290:38: 290 | integer :: STATUS, i, n, nlat, nlon | 1 Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_core/readiopdata_core_module.F90:291:19: 291 | integer :: varID, NCID | 1 Warning: Unused variable 'varid' declared at (1) [-Wunused-variable] [823/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_module.F90:260:16: 260 | integer :: k | 1 Warning: Unused variable 'k' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_module.F90:264:17: 264 | qtm_forcing ! Specified total water spec. humidity tendency [kg/kg/s] | 1 Warning: Unused variable 'qtm_forcing' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/readiopdata_module.F90:243:31: 243 | subroutine readiopdata_frc( rtm, gr, thlm_forcing, rtm_forcing ) | 1 Warning: Unused dummy argument 'rtm' at (1) [-Wunused-dummy-argument] [824/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:39:8: 39 | use constants_clubb, only: & | 1 Warning: Unused parameter 'kappa' which has been explicitly imported at (1) [-Wunused-parameter] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:57:8: 57 | use input_names, only: & | 1 Warning: Unused parameter 'omega_name' which has been explicitly imported at (1) [-Wunused-parameter] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:39:8: 39 | use constants_clubb, only: & | 1 Warning: Unused parameter 'p0' which has been explicitly imported at (1) [-Wunused-parameter] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:165:13: 165 | p_in_Pa, & ! Pressure [Pa] | 1 Warning: Array 'p_in_pa' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:160:8: 160 | rt, & ! Total water mixing ratio sounding [kg/kg] | 1 Warning: Array 'rt' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:166:10: 166 | subs ! Vertical velocity sounding [m/s or Pa/s] | 1 Warning: Array 'subs' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:159:11: 159 | theta, & ! Liquid potential temperature sounding [K] | 1 Warning: Array 'theta' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:161:7: 161 | u, & ! u wind sounding [m/s] | 1 Warning: Array 'u' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:163:8: 163 | ug, & ! u geostrophic wind sounding [m/s] | 1 Warning: Array 'ug' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:162:7: 162 | v, & ! v wind sounding [m/s] | 1 Warning: Array 'v' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:164:8: 164 | vg, & ! v geostrophic wind sounding [m/s] | 1 Warning: Array 'vg' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Input_fields/sounding.F90:158:7: 158 | z, & ! Altitude [m] | 1 Warning: Array 'z' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] [825/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o [826/923] Linking Fortran static library src/Input_fields/libinput_fields_lib.a [827/923] Generating Fortran dyndep file src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Fortran.dd [828/923] Generating Fortran dyndep file src/Microphys/CMakeFiles/microphys_lib.dir/Fortran.dd [829/923] Generating Fortran dyndep file src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/Fortran.dd [830/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o [831/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o [832/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o [833/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o [834/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o [835/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o [836/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o [837/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o [838/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o [839/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o [840/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o [841/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o [842/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o [843/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o [844/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o [845/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o [846/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o [847/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:407:27: 407 | .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:406:22: 406 | if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:462:22: 462 | if ( any( field_rev_rev /= field ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:221:27: 221 | .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:220:22: 220 | if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/G_unit_test_types/fill_holes_tests.F90:275:22: 275 | if ( any( field_rev_rev /= field ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] [848/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o [849/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o [850/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o [851/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Microphys/ice_dfsn_module.F90:282:27: 214 | do k = gr%nzt, 1, -1 | 2 ...... 282 | mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k) + dmass_ice_cryst(i,k) | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Microphys/ice_dfsn_module.F90:296:27: 214 | do k = gr%nzt, 1, -1 | 2 ...... 296 | mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k) | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] [852/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o [853/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o [854/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o [855/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o [856/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o [857/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o [858/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o [859/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o [860/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o [861/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o [862/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o [863/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o [864/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o [865/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o [866/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o [867/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o [868/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o [869/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o [870/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf02.F90.o [871/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o [872/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o [873/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o [874/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o [875/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o [876/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o [877/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf01.F90.o [878/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/bomex.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/Benchmark_cases/bomex.F90:22:48: 22 | gr, rtm, l_readiopdata, & | 1 Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument] [879/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90.o [880/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90.o [881/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex_long.F90.o [882/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex.F90.o [883/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_a.F90.o [884/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o [885/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o [886/923] Linking Fortran static library src/G_unit_test_types/libG_unit_test_lib.a [887/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o [888/923] Linking Fortran static library src/Benchmark_cases/libbenchmark_cases_lib.a [889/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o [890/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o [891/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/estimate_scm_microphys_module.F90.o [892/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/lh_microphys_driver_module.F90.o [893/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o [894/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o [895/923] Linking Fortran static library src/Microphys/libmicrophys_lib.a [896/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd [897/923] Generating Fortran dyndep file src/CMakeFiles/G_unit_tests.dir/Fortran.dd [898/923] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o [899/923] Linking Fortran executable src/G_unit_tests [900/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o [901/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_driver.F90:5542:76: 5542 | p_sfc, rtm_sfc, rtm, l_readiopdata, & !thlm_sfc, & | 1 Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument] [902/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_loss_driver.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver.F90:255:28: 255 | is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) ) | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] [903/923] Linking Fortran static library src/libclubb_driver_lib.a [904/923] Generating Fortran dyndep file src/CMakeFiles/clubb_thread_test.dir/Fortran.dd [905/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_test.dir/Fortran.dd [906/923] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone.dir/Fortran.dd [907/923] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone_loss.dir/Fortran.dd [908/923] Generating Fortran dyndep file src/CMakeFiles/clubb_tuner.dir/Fortran.dd [909/923] Generating Fortran dyndep file src/CMakeFiles/clubb_loss_driver_test.dir/Fortran.dd [910/923] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o [911/923] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o [912/923] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o [913/923] Building Fortran object src/CMakeFiles/clubb_standalone_loss.dir/clubb_standalone_loss.F90.o [914/923] Linking Fortran executable src/clubb_thread_test [915/923] Linking Fortran executable src/clubb_standalone [916/923] Building Fortran object src/CMakeFiles/clubb_loss_driver_test.dir/clubb_loss_driver_test.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:273:14: 273 | if ( any( test_scaled_rmse /= reference_scaled_rmse ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:278:14: 278 | if ( any( test_correlation /= reference_correlation ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:283:14: 283 | if ( any( test_std_ratio /= reference_std_ratio ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:288:14: 288 | if ( any( test_centered_rmse_norm /= reference_centered_rmse_norm ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:293:14: 293 | if ( any( test_bias_norm /= reference_bias_norm ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:512:14: 512 | if ( any( clubb_params_all_1 /= clubb_params_all_2 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:521:14: 521 | any( reinit_bias_norm_1 /= reinit_bias_norm_2 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:520:14: 520 | any( reinit_centered_rmse_norm_1 /= reinit_centered_rmse_norm_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:519:14: 519 | any( reinit_std_ratio_1 /= reinit_std_ratio_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:518:14: 518 | any( reinit_correlation_1 /= reinit_correlation_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:517:14: 517 | if ( any( reinit_scaled_rmse_1 /= reinit_scaled_rmse_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:431:14: 431 | if ( all( tweaked_scaled_rmse == reference_scaled_rmse ) ) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:371:14: 371 | any( manual_bias_norm_2 /= manual_bias_norm_1 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:370:14: 370 | any( manual_centered_rmse_norm_2 /= manual_centered_rmse_norm_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:369:14: 369 | any( manual_std_ratio_2 /= manual_std_ratio_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:368:14: 368 | any( manual_correlation_2 /= manual_correlation_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_BFB_gfortran_test/src/clubb_loss_driver_test.F90:367:14: 367 | if ( any( manual_scaled_rmse_2 /= manual_scaled_rmse_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] [917/923] Linking Fortran executable src/clubb_standalone_loss [918/923] Linking Fortran executable src/clubb_driver_test [919/923] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o [920/923] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o [921/923] Linking Fortran executable src/clubb_loss_driver_test [922/923] Linking Fortran executable src/clubb_tuner [922/923] Install the project... -- Install configuration: "Debug" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types Build completed successfully, and all source code checks passed. Performing min-cases run Using 12 process(es) Cases to run: arm, atex, bomex, dycoms2_rf01, dycoms2_rf02_ds, rico, wangara, arm_97, gabls3_night, lba, twp_ice, bomex_5day_4scam COMPLETE -- bomex_5day_4scam COMPLETE -- bomex COMPLETE -- wangara COMPLETE -- atex COMPLETE -- dycoms2_rf01 COMPLETE -- arm COMPLETE -- dycoms2_rf02_ds COMPLETE -- rico COMPLETE -- gabls3_night COMPLETE -- lba COMPLETE -- twp_ice COMPLETE -- arm_97 =================== Runs Complete =================== All cases ran to completion. -- Compiling with double precision -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_BFB_gfortran_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble about to cmnake /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Running CMake configure... [0/1] Install the project... -- Install configuration: "Debug" -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types Build completed successfully, and all source code checks passed. Performing min-cases run Using 12 process(es) Cases to run: arm, atex, bomex, dycoms2_rf01, dycoms2_rf02_ds, rico, wangara, arm_97, gabls3_night, lba, twp_ice, bomex_5day_4scam COMPLETE -- bomex_5day_4scam COMPLETE -- bomex COMPLETE -- wangara COMPLETE -- dycoms2_rf01 COMPLETE -- atex COMPLETE -- arm COMPLETE -- dycoms2_rf02_ds COMPLETE -- rico COMPLETE -- gabls3_night COMPLETE -- lba COMPLETE -- twp_ice COMPLETE -- arm_97 =================== Runs Complete =================== All cases ran to completion. Installing uv 0.11.32 in /home/jenkins/workspace/clubb_BFB_gfortran_test/.clubb-python-tools/bin downloading uv 0.11.32 x86_64-unknown-linux-gnu installing to /home/jenkins/workspace/clubb_BFB_gfortran_test/.clubb-python-tools/bin uv uvx everything's installed! Creating CLUBB virtualenv: /home/jenkins/workspace/clubb_BFB_gfortran_test/.venv-python Downloading cpython-3.12.13-linux-x86_64-gnu (download) (32.6MiB) Downloaded cpython-3.12.13-linux-x86_64-gnu (download) Using CPython 3.12.13 Creating virtual environment at: .venv-python Activate with: source .venv-python/bin/activate Installing python requirements into /home/jenkins/workspace/clubb_BFB_gfortran_test/.venv-python Using Python 3.12.13 environment at: .venv-python Resolved 12 packages in 349ms Downloading meson (1.1MiB) Downloading pygments (1.2MiB) Downloading netcdf4 (9.7MiB) Downloading cftime (1.6MiB) Downloading numpy (16.0MiB) Downloaded cftime Downloaded meson Downloaded pygments Downloaded netcdf4 Downloaded numpy Prepared 12 packages in 614ms Installed 12 packages in 36ms + certifi==2026.7.22 + cftime==1.6.6.1 + iniconfig==2.3.1 + meson==1.12.1 + netcdf4==1.7.4 + ninja==1.13.2 + numpy==2.5.4 + packaging==26.3 + pluggy==1.6.0 + pygments==2.21.0 + pytest==9.1.1 + tabulate==0.10.0 Ready: /home/jenkins/workspace/clubb_BFB_gfortran_test/.venv-python/bin/python Directory 1 is af934ad3986d77e381919822755fc51a0168849f Directory 2 is 4292a70f53a6b6c4eab864fe27b8fd9af5d86909 Using reporting threshold: 0.0 The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex_5day_4scam', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara'] ================================================ arm_97 ================================================ >No differences detected by the linux diff in arm_97_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case arm_97.<<< ===================================================================================================== ================================================ arm ================================================ >No differences detected by the linux diff in arm_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case arm.<<< ===================================================================================================== ================================================ atex ================================================ >No differences detected by the linux diff in atex_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case atex.<<< ===================================================================================================== ================================================ bomex_5day_4scam ================================================ >No differences detected by the linux diff in bomex_5day_4scam_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case bomex_5day_4scam.<<< ===================================================================================================== ================================================ bomex ================================================ >No differences detected by the linux diff in bomex_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case bomex.<<< ===================================================================================================== ================================================ dycoms2_rf01 ================================================ >No differences detected by the linux diff in dycoms2_rf01_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.<<< ===================================================================================================== ================================================ dycoms2_rf02_ds ================================================ >No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.<<< ===================================================================================================== ================================================ gabls3_night ================================================ >No differences detected by the linux diff in gabls3_night_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case gabls3_night.<<< ===================================================================================================== ================================================ lba ================================================ >No differences detected by the linux diff in lba_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case lba.<<< ===================================================================================================== ================================================ rico ================================================ >No differences detected by the linux diff in rico_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case rico.<<< ===================================================================================================== ================================================ twp_ice ================================================ >No differences detected by the linux diff in twp_ice_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case twp_ice.<<< ===================================================================================================== ================================================ wangara ================================================ >No differences detected by the linux diff in wangara_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case wangara.<<< ===================================================================================================== SUMMARY: Linux diff did not detect any differences in the compared files. Pass: 12 cases ['arm_97', 'arm', 'atex', 'bomex_5day_4scam', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara'] Fail: 0 cases [] -- Compiling with double precision -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_BFB_gfortran_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble about to cmnake /home/jenkins/workspace/clubb_BFB_gfortran_test/build/gcc_DEBUG_PRECdouble Running CMake configure... [1/19] Building Fortran preprocessed src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90-pp.f90 [2/19] Building Fortran preprocessed src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/cubic_solve_tests.F90-pp.f90 [3/19] Building Fortran preprocessed src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_roots.F90-pp.f90 [4/19] Generating Fortran dyndep file src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Fortran.dd [5/25] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_roots.F90.o [6/19] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a [7/19] Generating Fortran dyndep file src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Fortran.dd [8/19] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/cubic_solve_tests.F90.o /home/jenkins/workspace/clubb_BFB_gfortran_test/src/G_unit_test_types/cubic_solve_tests.F90:179:16: 179 | if ( any( aimag( roots_cmp(k,:) ) /= zero ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] [9/19] Linking Fortran executable src/clubb_thread_test [10/19] Linking Fortran static library src/G_unit_test_types/libG_unit_test_lib.a [11/19] Generating Fortran dyndep file src/CMakeFiles/G_unit_tests.dir/Fortran.dd [12/19] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o [13/19] Linking Fortran executable src/clubb_tuner [14/19] Linking Fortran executable src/clubb_standalone [15/19] Linking Fortran executable src/clubb_loss_driver_test [16/19] Linking Fortran executable src/clubb_driver_test [17/19] Linking Fortran executable src/clubb_standalone_loss [18/19] Linking Fortran executable src/G_unit_tests [18/19] Install the project... -- Install configuration: "Debug" -- Up-to-date: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_BFB_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types Build completed successfully, and all source code checks passed. Performing min-cases run Using 12 process(es) Cases to run: arm, atex, bomex, dycoms2_rf01, dycoms2_rf02_ds, rico, wangara, arm_97, gabls3_night, lba, twp_ice, bomex_5day_4scam COMPLETE -- bomex_5day_4scam COMPLETE -- bomex COMPLETE -- wangara COMPLETE -- dycoms2_rf01 COMPLETE -- atex COMPLETE -- arm COMPLETE -- dycoms2_rf02_ds COMPLETE -- rico COMPLETE -- gabls3_night COMPLETE -- lba COMPLETE -- twp_ice COMPLETE -- arm_97 =================== Runs Complete =================== All cases ran to completion. Directory 1 is a8c952996409f8c94d6a28714171145ed7d2c2ae Directory 2 is af934ad3986d77e381919822755fc51a0168849f Using reporting threshold: 0.0 The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex_5day_4scam', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara'] ================================================ arm_97 ================================================ >No differences detected by the linux diff in arm_97_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case arm_97.<<< ===================================================================================================== ================================================ arm ================================================ >No differences detected by the linux diff in arm_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case arm.<<< ===================================================================================================== ================================================ atex ================================================ >No differences detected by the linux diff in atex_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case atex.<<< ===================================================================================================== ================================================ bomex_5day_4scam ================================================ >No differences detected by the linux diff in bomex_5day_4scam_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case bomex_5day_4scam.<<< ===================================================================================================== ================================================ bomex ================================================ >No differences detected by the linux diff in bomex_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case bomex.<<< ===================================================================================================== ================================================ dycoms2_rf01 ================================================ >No differences detected by the linux diff in dycoms2_rf01_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.<<< ===================================================================================================== ================================================ dycoms2_rf02_ds ================================================ >No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.<<< ===================================================================================================== ================================================ gabls3_night ================================================ >No differences detected by the linux diff in gabls3_night_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case gabls3_night.<<< ===================================================================================================== ================================================ lba ================================================ >No differences detected by the linux diff in lba_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case lba.<<< ===================================================================================================== ================================================ rico ================================================ >No differences detected by the linux diff in rico_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case rico.<<< ===================================================================================================== ================================================ twp_ice ================================================ >No differences detected by the linux diff in twp_ice_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case twp_ice.<<< ===================================================================================================== ================================================ wangara ================================================ >No differences detected by the linux diff in wangara_stats.nc< >>>The linux diff could not detect any differences in the file pairs for case wangara.<<< ===================================================================================================== SUMMARY: Linux diff did not detect any differences in the compared files. Pass: 12 cases ['arm_97', 'arm', 'atex', 'bomex_5day_4scam', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara'] Fail: 0 cases [] =============================== Configuring Test =============================== Working directory set to: /home/jenkins/workspace/clubb_BFB_gfortran_test Checking specified repo: /home/jenkins/workspace/clubb_BFB_gfortran_test Using /home/jenkins/workspace/clubb_BFB_gfortran_test with origin https://github.com/larson-group/clubb.git Output Save Mode: none Using branch: master Making list from 'UnresolvedCommits': CheckRange = True: Getting commit range Run Output Path: output Run commands: ['python compile.py -debug', '\nrm -rf output', '\nmkdir output', '\npython run_scripts/run_scm_all.py -min_cases'] Diffing command: run_scripts/run_bindiff_all.py =============================== Running Test =============================== Parsing message from commit: af934ad3986d77e381919822755fc51a0168849f Parsing message from commit: a8c952996409f8c94d6a28714171145ed7d2c2ae Found: BIT_CHANGING Checking Commit: af934ad3986d77e381919822755fc51a0168849f Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: a8c952996409f8c94d6a28714171145ed7d2c2ae Checking out af934ad3986d77e381919822755fc51a0168849f Running: 'python compile.py -debug' Running: 'rm -rf output' Running: 'mkdir output' Running: 'python run_scripts/run_scm_all.py -min_cases' Checking out 4292a70f53a6b6c4eab864fe27b8fd9af5d86909 Running: 'python compile.py -debug' Running: 'rm -rf output' Running: 'mkdir output' Running: 'python run_scripts/run_scm_all.py -min_cases' Diffing: 'run_scripts/run_bindiff_all.py af934ad3986d77e381919822755fc51a0168849f 4292a70f53a6b6c4eab864fe27b8fd9af5d86909' Checking out a8c952996409f8c94d6a28714171145ed7d2c2ae Running: 'python compile.py -debug' Running: 'rm -rf output' Running: 'mkdir output' Running: 'python run_scripts/run_scm_all.py -min_cases' Output from af934ad3986d77e381919822755fc51a0168849f already saved Diffing: 'run_scripts/run_bindiff_all.py a8c952996409f8c94d6a28714171145ed7d2c2ae af934ad3986d77e381919822755fc51a0168849f' WARNING: commit 'a8c952996409f8c94d6a28714171145ed7d2c2ae' was supposed to be BIT_CHANGING, but is not. =============================== Test Results =============================== Commit Range Checked = 4292a70f53a6b6c4eab864fe27b8fd9af5d86909...a8c952996409f8c94d6a28714171145ed7d2c2ae No new Unresolved commits found. Fake BIT_CHANGING Commits: a8c952996409f8c94d6a28714171145ed7d2c2ae No remaining Unresolved Commits. =============================== Updating Config File =============================== Saving into UnresolvedCommits: Saving into BaselineCommit: a8c952996409f8c94d6a28714171145ed7d2c2ae =============================== Cleanup =============================== Removing all generated output REMOVING: 4292a70f53a6b6c4eab864fe27b8fd9af5d86909 REMOVING: af934ad3986d77e381919822755fc51a0168849f REMOVING: a8c952996409f8c94d6a28714171145ed7d2c2ae ================== Unresolved Commit Status ================== No remaining Unresolved Commits. Exiting with code: 0 [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS