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Started by an SCM change
Obtained jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile from git https://github.com/larson-group/clubb.git
Running in Durability level: MAX_SURVIVABILITY
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test_new
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
 > git init /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test_new # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
 > git --version # timeout=10
 > git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision 728531ab73a7f769b1daea31a00fdb2afe821dd9 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 728531ab73a7f769b1daea31a00fdb2afe821dd9 # timeout=10
Commit message: "Adding in l_vary_convect_depth as requested. For ticket #905. Results are confirmed to be BFB identical."
 > git rev-list --no-walk 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Clone SysAdmin to tmp)
[Pipeline] sh
+ rm -rf /home/jenkins/clubb_bit_diff_test_workspace/sys_admin
+ git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bit_diff_test_workspace/sys_admin
Cloning into '/home/jenkins/clubb_bit_diff_test_workspace/sys_admin'...
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run Python Test)
[Pipeline] sh
+ python3 /home/jenkins/clubb_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bit_diff_test_workspace/bit_diff_clubb_config
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_gfdlact.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:132:23:

                hydromet, &                                          ! Unused
                       1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_param.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_lapack.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libmicrophys_utils.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_parabolic.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_KK_microphys.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_bugsrad.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_coamps.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:315:13:

     rho_ds_zt, & ! Unused
             1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_morrison.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libsilhs.a
../src/KK_microphys_module.F90:43:35:

   subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube,             & ! In
                                   1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_other.a
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Directory 1 is /home/jenkins/clubb_bit_diff_test_workspace/728531ab73a7f769b1daea31a00fdb2afe821dd9.
Directory 2 is /home/jenkins/clubb_bit_diff_test_workspace/latest_revision_validated_6074d7b38f6bd68b4344ab19c9e3ddf8de415e95.
Diffing arm netCDF (*.nc) files
Diffing arm_97 netCDF (*.nc) files
Diffing atex netCDF (*.nc) files
Diffing bomex netCDF (*.nc) files
Diffing dycoms2_rf01 netCDF (*.nc) files
Diffing dycoms2_rf02_ds netCDF (*.nc) files
Diffing gabls3_night netCDF (*.nc) files
Diffing lba netCDF (*.nc) files
Diffing rico netCDF (*.nc) files
Diffing twp_ice netCDF (*.nc) files
Diffing wangara netCDF (*.nc) files

There were no differences detected!

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/clubb_bit_diff_test_workspace
Trying to clone repo...

Cloned repo location: /home/jenkins/clubb_bit_diff_test_workspace/repo

Output Save Mode: last

Using branch: master

Commits to test vs the baseline (6074d7b38f6bd68b4344ab19c9e3ddf8de415e95)
	728531ab73a7f769b1daea31a00fdb2afe821dd9

Making list from 'UnresolvedCommits':
	- 1656d87e61d919b78bfa54fc2d30171d4a9b1601

Run Output Path: repo/output

Run commands: ['repo/compile/compile.bash', 'rm -rf repo/output', 'mkdir repo/output', 'repo/run_scripts/run_scm_all.bash --min-cases']

Diffing command: repo/run_scripts/run_bindiff_all.bash

=============================== Running Test ===============================

Parsing message from commit: 728531ab73a7f769b1daea31a00fdb2afe821dd9

Checking Commit: 728531ab73a7f769b1daea31a00fdb2afe821dd9
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out 728531ab73a7f769b1daea31a00fdb2afe821dd9
	Running: 'repo/compile/compile.bash'
	Running: 'rm -rf repo/output'
	Running: 'mkdir repo/output'
	Running: 'repo/run_scripts/run_scm_all.bash --min-cases'
	Output from 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 already saved
	Diffing: 'repo/run_scripts/run_bindiff_all.bash 728531ab73a7f769b1daea31a00fdb2afe821dd9 latest_revision_validated_6074d7b38f6bd68b4344ab19c9e3ddf8de415e95'

=============================== Test Results ===============================

Commit Range Checked = 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95...728531ab73a7f769b1daea31a00fdb2afe821dd9

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

Remaining Unresolved Commits:
	1656d87e61d919b78bfa54fc2d30171d4a9b1601

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 1656d87e61d919b78bfa54fc2d30171d4a9b1601


Saving into BaselineCommit: 728531ab73a7f769b1daea31a00fdb2afe821dd9

=============================== Cleanup ===============================

Removed repo.

Removing all but final generated output.
	REMOVING: 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95
	RENAMING 728531ab73a7f769b1daea31a00fdb2afe821dd9 to latest_revision_validated_728531ab73a7f769b1daea31a00fdb2afe821dd9

Exiting with code: 1
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] emailext
Sending email to: messnermet@uwm.edu
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE