Started by an SCM change Obtained jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile from git https://github.com/larson-group/clubb.git Running in Durability level: MAX_SURVIVABILITY [Pipeline] Start of Pipeline [Pipeline] node Running on Jenkins in /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test_new [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test_new # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 1.8.3.1' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 # timeout=10 Commit message: "Change normalization of sensitivity matrix. Before it was normalized by (default-observed) values of metrics. Now it is normalized by 1/obs. This leaves the sensitivity matrix free from dependence on the bias and puts the bias entirely on the right-hand side of the matrix equation. Also, the parameter values are no longer normalized by max(def,sens) values. Instead, they are normalized by the values used in the default simulation, and a sensitivity simulation value is used only if the default-simulation value is zero." > git rev-list --no-walk e8cfbf132e77e340988e90938742ec1912a371d1 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Clone SysAdmin to tmp) [Pipeline] sh + rm -rf /home/jenkins/clubb_bit_diff_test_workspace/sys_admin + git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bit_diff_test_workspace/sys_admin Cloning into '/home/jenkins/clubb_bit_diff_test_workspace/sys_admin'... [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + python3 /home/jenkins/clubb_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bit_diff_test_workspace/bit_diff_clubb_config .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_gfdlact.a /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:132:23: hydromet, & ! Unused 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_param.a ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_lapack.a ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libmicrophys_utils.a ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_parabolic.a ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_KK_microphys.a /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:315:13: rho_ds_zt, & ! Unused 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libsilhs.a ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_coamps.a ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_bugsrad.a ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_morrison.a ../src/KK_microphys_module.F90:43:35: subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_other.a CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/clubb_bit_diff_test_workspace/6074d7b38f6bd68b4344ab19c9e3ddf8de415e95. Directory 2 is /home/jenkins/clubb_bit_diff_test_workspace/latest_revision_validated_e8cfbf132e77e340988e90938742ec1912a371d1. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files Diffing rico netCDF (*.nc) files Diffing twp_ice netCDF (*.nc) files Diffing wangara netCDF (*.nc) files There were no differences detected! =============================== Configuring Test =============================== Working directory set to: /home/jenkins/clubb_bit_diff_test_workspace Trying to clone repo... Cloned repo location: /home/jenkins/clubb_bit_diff_test_workspace/repo Output Save Mode: last Using branch: master Commits to test vs the baseline (e8cfbf132e77e340988e90938742ec1912a371d1) 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 Making list from 'UnresolvedCommits': - 1656d87e61d919b78bfa54fc2d30171d4a9b1601 Run Output Path: repo/output Run commands: ['repo/compile/compile.bash', 'rm -rf repo/output', 'mkdir repo/output', 'repo/run_scripts/run_scm_all.bash --min-cases'] Diffing command: repo/run_scripts/run_bindiff_all.bash =============================== Running Test =============================== Parsing message from commit: 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 Checking Commit: 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 Running: final commit to check, not labelled BIT_CHANGING Checking out 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 Running: 'repo/compile/compile.bash' Running: 'rm -rf repo/output' Running: 'mkdir repo/output' Running: 'repo/run_scripts/run_scm_all.bash --min-cases' Output from e8cfbf132e77e340988e90938742ec1912a371d1 already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 latest_revision_validated_e8cfbf132e77e340988e90938742ec1912a371d1' =============================== Test Results =============================== Commit Range Checked = e8cfbf132e77e340988e90938742ec1912a371d1...6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 No new Unresolved commits found. No fake BIT_CHANGING commits found. Remaining Unresolved Commits: 1656d87e61d919b78bfa54fc2d30171d4a9b1601 =============================== Updating Config File =============================== Saving into UnresolvedCommits: 1656d87e61d919b78bfa54fc2d30171d4a9b1601 Saving into BaselineCommit: 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 =============================== Cleanup =============================== Removed repo. Removing all but final generated output. REMOVING: e8cfbf132e77e340988e90938742ec1912a371d1 RENAMING 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 to latest_revision_validated_6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 Exiting with code: 1 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] } [Pipeline] // script [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 1 Finished: FAILURE