Started by an SCM change
Obtained jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile from git https://github.com/larson-group/clubb.git
Running in Durability level: MAX_SURVIVABILITY
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test_new
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
> git init /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test_new # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
> git --version # timeout=10
> git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
> git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision 8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb (refs/remotes/origin/master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb # timeout=10
Commit message: "Changing the denominator in the variable-by-variable expression so that the individual terms add up to the total percent improvement."
> git rev-list --no-walk fe04ac942588573394579558242909b97254ccbb # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Clone SysAdmin to tmp)
[Pipeline] sh
+ rm -rf /home/jenkins/clubb_bit_diff_test_workspace/sys_admin
+ git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bit_diff_test_workspace/sys_admin
Cloning into '/home/jenkins/clubb_bit_diff_test_workspace/sys_admin'...
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run Python Test)
[Pipeline] sh
+ python3 /home/jenkins/clubb_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bit_diff_test_workspace/bit_diff_clubb_config
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_gfdlact.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:132:23:
hydromet, & ! Unused
1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_param.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_lapack.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libmicrophys_utils.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_parabolic.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_KK_microphys.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_bugsrad.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_coamps.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:315:13:
rho_ds_zt, & ! Unused
1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_morrison.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libsilhs.a
../src/KK_microphys_module.F90:43:35:
subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In
1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_other.a
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Directory 1 is /home/jenkins/clubb_bit_diff_test_workspace/8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb.
Directory 2 is /home/jenkins/clubb_bit_diff_test_workspace/latest_revision_validated_fe04ac942588573394579558242909b97254ccbb.
Diffing arm netCDF (*.nc) files
Diffing arm_97 netCDF (*.nc) files
Diffing atex netCDF (*.nc) files
Diffing bomex netCDF (*.nc) files
Diffing dycoms2_rf01 netCDF (*.nc) files
Diffing dycoms2_rf02_ds netCDF (*.nc) files
Diffing gabls3_night netCDF (*.nc) files
Diffing lba netCDF (*.nc) files
Diffing rico netCDF (*.nc) files
Diffing twp_ice netCDF (*.nc) files
Diffing wangara netCDF (*.nc) files
There were no differences detected!
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/clubb_bit_diff_test_workspace
Trying to clone repo...
Cloned repo location: /home/jenkins/clubb_bit_diff_test_workspace/repo
Output Save Mode: last
Using branch: master
Commits to test vs the baseline (fe04ac942588573394579558242909b97254ccbb)
02cccd21b6adb0e05e98f5c06d3be2a6ce7f0cf0
8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb
Making list from 'UnresolvedCommits':
Run Output Path: repo/output
Run commands: ['repo/compile/compile.bash', 'rm -rf repo/output', 'mkdir repo/output', 'repo/run_scripts/run_scm_all.bash --min-cases']
Diffing command: repo/run_scripts/run_bindiff_all.bash
=============================== Running Test ===============================
Parsing message from commit: 02cccd21b6adb0e05e98f5c06d3be2a6ce7f0cf0
Parsing message from commit: 8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb
Checking Commit: 02cccd21b6adb0e05e98f5c06d3be2a6ce7f0cf0
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: 8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb
Running: final commit to check, not labelled BIT_CHANGING
Checking out 8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb
Running: 'repo/compile/compile.bash'
Running: 'rm -rf repo/output'
Running: 'mkdir repo/output'
Running: 'repo/run_scripts/run_scm_all.bash --min-cases'
Output from fe04ac942588573394579558242909b97254ccbb already saved
Diffing: 'repo/run_scripts/run_bindiff_all.bash 8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb latest_revision_validated_fe04ac942588573394579558242909b97254ccbb'
=============================== Test Results ===============================
Commit Range Checked = fe04ac942588573394579558242909b97254ccbb...8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb
No new Unresolved commits found.
No fake BIT_CHANGING commits found.
No remaining Unresolved Commits.
=============================== Updating Config File ===============================
Saving into UnresolvedCommits:
Saving into BaselineCommit: 8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb
=============================== Cleanup ===============================
Removed repo.
Removing all but final generated output.
REMOVING: fe04ac942588573394579558242909b97254ccbb
RENAMING 8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb to latest_revision_validated_8901b7ce5a715ef407f741ef8d42eebd7cb5bdcb
Exiting with code: 0
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS