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Started by user Gunther Huebler
Obtained jenkins_tests/cam_scam_gfortran_debug_test/Jenkinsfile from git https://github.com/larson-group/cam.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/cam_scam_gfortran_debug_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Wiping out workspace first.
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/cam.git
 > git init /home/jenkins/workspace/cam_scam_gfortran_debug_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/cam.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
 > git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision 231228a130cc514a9762e976d83229ba1d77003c (refs/remotes/origin/clubb_silhs_devel)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 231228a130cc514a9762e976d83229ba1d77003c # timeout=10
Commit message: "Update to make compatible with new stats.  (#214)"
 > git rev-list --no-walk fc2aea51f7e10943c7ba8a276138380f33cc0a23 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Externals and Copy Custom Files)
[Pipeline] sh
+ python run_scripts/set_up_repo.py .
Checking out externals...
Copying ccs_config files
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Remove Old Output)
[Pipeline] sh
+ rm -rf /home/jenkins/cam_output/scratch/test_scam_ATEX /home/jenkins/cam_output/scratch/test_scam_ARM97
[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run atex)
[Pipeline] sh
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ run_scripts/run_scam.bash ATEX
----- Case Setup -----
Compset longname is 2000_CAM60%SCAMATEX_CLM50%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV
Compset specification file is /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime_config/config_compsets.xml
Automatically adding SESP to compset
Compset forcing is 1972-2004
ATM component is CAM cam6 physics:
LND component is clm5.0:Satellite phenology:
ICE component is Sea ICE (cice) model version 6 :prescribed cice
OCN component is DOCN   prescribed ocean mode
ROF component is Stub river component
GLC component is Stub glacier (land ice) component
WAV component is Stub wave component
ESP component is Stub external system processing (ESP) component
Pes     specification file is /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime_config/config_pes.xml
Compset specific settings: name is RUN_STARTDATE and value is 1969-02-15
Compset specific settings: name is STOP_N and value is 47
Compset specific settings: name is STOP_OPTION and value is nhours
Compset specific settings: name is START_TOD and value is 0
Compset specific settings: name is PTS_MODE and value is TRUE
Compset specific settings: name is PTS_LAT and value is 15.0
Compset specific settings: name is PTS_LON and value is 345.0
Machine is larson-group
vid is comment
vid is ntasks
vid is nthrds
vid is rootpe
Pes setting: grid          is a%T42_l%T42_oi%T42_r%null_g%null_w%null_z%null_m%gx1v7 
Pes setting: compset       is 2000_CAM60%SCAMATEX_CLM50%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SESP 
Pes setting: tasks       is {'NTASKS_ATM': 1, 'NTASKS_LND': 1, 'NTASKS_ROF': 1, 'NTASKS_ICE': 1, 'NTASKS_OCN': 1, 'NTASKS_GLC': 1, 'NTASKS_WAV': 1, 'NTASKS_CPL': 1} 
Pes setting: threads     is {'NTHRDS_ATM': 1, 'NTHRDS_LND': 1, 'NTHRDS_ROF': 1, 'NTHRDS_ICE': 1, 'NTHRDS_OCN': 1, 'NTHRDS_GLC': 1, 'NTHRDS_WAV': 1, 'NTHRDS_CPL': 1} 
Pes setting: rootpe      is {'ROOTPE_ATM': 0, 'ROOTPE_LND': 0, 'ROOTPE_ROF': 0, 'ROOTPE_ICE': 0, 'ROOTPE_OCN': 0, 'ROOTPE_GLC': 0, 'ROOTPE_WAV': 0, 'ROOTPE_CPL': 0} 
Pes setting: pstrid      is {} 
Pes other settings: {}
Pes comments: none
setting additional fields from config_pes: {}
 Compset is: 2000_CAM60%SCAMATEX_CLM50%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SESP 
 Grid is: a%T42_l%T42_oi%T42_r%null_g%null_w%null_z%null_m%gx1v7 
 Components in compset are: ['cam', 'clm', 'cice', 'docn', 'srof', 'sglc', 'swav', 'sesp'] 

This is a CESM scientifically supported compset at this resolution.

No project info available
No charge_account info available, using value from PROJECT
cesm model version found: cam_4ncar_20240605_2f3c896-896-g231228a13
Batch_system_type is none
 Creating Case directory /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/scripts/test_scam_ATEX
This component includes user_mods /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime_config/usermods_dirs/scam_mandatory
Adding user mods directory /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime_config/usermods_dirs/scam_mandatory
RUN: /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/scripts/test_scam_ATEX/shell_commands
FROM: /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/scripts/test_scam_ATEX
Creating batch scripts
Writing case.run script from input template /home/jenkins/workspace/cam_scam_gfortran_debug_test/ccs_config/machines/template.case.run
Creating file .case.run
Writing case.st_archive script from input template /home/jenkins/workspace/cam_scam_gfortran_debug_test/ccs_config/machines/template.st_archive
Creating file case.st_archive
Creating user_nl_xxx files for components and cpl
Running cam.case_setup.py
If an old case build already exists, might want to run 'case.build --clean' before building
You can now run './preview_run' to get more info on how your case will be run
----- Compile Configuration -----
----- Run configuration -----
----- Compile -----
Building case in directory /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/scripts/test_scam_ATEX
sharedlib_only is False
model_only is False
Generating component namelists as part of build
  2026-02-18 00:25:01 atm 
Create namelist for component cam
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime_config/buildnml
     ...calling cam buildcpp to set build time options
CAM namelist copy: file1 /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/scripts/test_scam_ATEX/Buildconf/camconf/atm_in file2 /home/jenkins/cam_output/scratch/test_scam_ATEX/run/atm_in 
  2026-02-18 00:25:01 lnd 
Create namelist for component clm
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/clm//cime_config/buildnml
WARNING: CLM is starting up from a cold state
  2026-02-18 00:25:02 ice 
Create namelist for component cice
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cice//cime_config/buildnml
  2026-02-18 00:25:02 ocn 
Create namelist for component docn
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/docn/cime_config/buildnml
docn_mode is prescribed
  2026-02-18 00:25:02 rof 
Create namelist for component srof
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/non_py/src/components/stub_comps_nuopc/srof/cime_config/buildnml
  2026-02-18 00:25:02 glc 
Create namelist for component sglc
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sglc/cime_config/buildnml
  2026-02-18 00:25:02 wav 
Create namelist for component swav
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/non_py/src/components/stub_comps_nuopc/swav/cime_config/buildnml
  2026-02-18 00:25:02 esp 
Create namelist for component sesp
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/non_py/src/components/stub_comps_nuopc/sesp/cime_config/buildnml
  2026-02-18 00:25:02 cpl 
Create namelist for component drv
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cmeps/cime_config/buildnml
Writing nuopc_runconfig for components ['CPL', 'ATM', 'LND', 'ICE', 'OCN']
Building gptl with output to file /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gptl.bldlog.260218-002501
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/build_scripts/buildlib.gptl
Component gptl build complete with 21 warnings
Building pio with output to file /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/pio.bldlog.260218-002501
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/build_scripts/buildlib.pio
Building csm_share with output to file /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/csm_share.bldlog.260218-002501
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/share/buildlib.csm_share
Component csm_share build complete with 254 warnings
Building CDEPS with output to file /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/CDEPS.bldlog.260218-002501
   Calling /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/cime_config/buildlib
Traceback (most recent call last):
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/utils.py", line 707, in run_sub_or_cmd
    getattr(mod, subname)(*subargs)
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/cime_config/buildlib", line 193, in buildlib
    expect(not s, "ERROR from make output={}, error={}".format(o, e))
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/utils.py", line 176, in expect
    raise exc_type(msg)
CIME.utils.CIMEError: ERROR: ERROR from make output=/usr/bin/cmake -S/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps -B/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/CMakeFiles /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS'
make  -f fox/fsys/CMakeFiles/FoX_fsys.dir/build.make fox/fsys/CMakeFiles/FoX_fsys.dir/depend
make[2]: Entering directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS'
cd /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys/CMakeFiles/FoX_fsys.dir/DependInfo.cmake --color=
Dependee "/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys/CMakeFiles/FoX_fsys.dir/DependInfo.cmake" is newer than depender "/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys/CMakeFiles/FoX_fsys.dir/depend.internal".
Dependee "/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys/CMakeFiles/FoX_fsys.dir/depend.internal".
Scanning dependencies of target FoX_fsys
make[2]: Leaving directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS'
make  -f fox/fsys/CMakeFiles/FoX_fsys.dir/build.make fox/fsys/CMakeFiles/FoX_fsys.dir/build
make[2]: Entering directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS'
[  1%] Building Fortran object fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_abort_flush.F90.o
cd /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys && /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/mpich-4.2.1-gtcnmvuhs6smxkg3kesurbqlygyw2x66/bin/mpif90 -DCESMCOUPLED -DFC_EOR_LF -DFC_HAVE_ABORT -DFC_HAVE_FLUSH -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -g -Wall -Og -fbacktrace -ffpe-trap=zero,overflow -fcheck=bounds  -DCESMCOUPLED -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/include -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include  -J../include -c /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_abort_flush.F90 -o CMakeFiles/FoX_fsys.dir/fox_m_fsys_abort_flush.F90.o
/usr/bin/cmake -E cmake_copy_f90_mod fox/include/fox_m_fsys_abort_flush.mod fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_abort_flush.mod.stamp GNU
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cd /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys && /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/mpich-4.2.1-gtcnmvuhs6smxkg3kesurbqlygyw2x66/bin/mpif90 -DCESMCOUPLED -DFC_EOR_LF -DFC_HAVE_ABORT -DFC_HAVE_FLUSH -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -g -Wall -Og -fbacktrace -ffpe-trap=zero,overflow -fcheck=bounds  -DCESMCOUPLED -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/include -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include  -J../include -c /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_array_str.F90 -o CMakeFiles/FoX_fsys.dir/fox_m_fsys_array_str.F90.o
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[  3%] Building Fortran object fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_realtypes.f90.o
cd /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys && /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/mpich-4.2.1-gtcnmvuhs6smxkg3kesurbqlygyw2x66/bin/mpif90 -DCESMCOUPLED -DFC_EOR_LF -DFC_HAVE_ABORT -DFC_HAVE_FLUSH -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -g -Wall -Og -fbacktrace -ffpe-trap=zero,overflow -fcheck=bounds  -DCESMCOUPLED -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/include -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include  -J../include -c /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_realtypes.f90 -o CMakeFiles/FoX_fsys.dir/fox_m_fsys_realtypes.f90.o
/usr/bin/cmake -E cmake_copy_f90_mod fox/include/fox_m_fsys_realtypes.mod fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_realtypes.mod.stamp GNU
[  4%] Building Fortran object fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_count_parse_input.F90.o
cd /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys && /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/mpich-4.2.1-gtcnmvuhs6smxkg3kesurbqlygyw2x66/bin/mpif90 -DCESMCOUPLED -DFC_EOR_LF -DFC_HAVE_ABORT -DFC_HAVE_FLUSH -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -g -Wall -Og -fbacktrace -ffpe-trap=zero,overflow -fcheck=bounds  -DCESMCOUPLED -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/include -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include  -J../include -c /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90 -o CMakeFiles/FoX_fsys.dir/fox_m_fsys_count_parse_input.F90.o
/usr/bin/cmake -E cmake_copy_f90_mod fox/include/fox_m_fsys_count_parse_input.mod fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_count_parse_input.mod.stamp GNU
/usr/bin/cmake -E touch fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_count_parse_input.F90.o.provides.build
[  5%] Building Fortran object fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_format.F90.o
cd /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys && /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/mpich-4.2.1-gtcnmvuhs6smxkg3kesurbqlygyw2x66/bin/mpif90 -DCESMCOUPLED -DFC_EOR_LF -DFC_HAVE_ABORT -DFC_HAVE_FLUSH -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -g -Wall -Og -fbacktrace -ffpe-trap=zero,overflow -fcheck=bounds  -DCESMCOUPLED -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/include -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include  -J../include -c /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_format.F90 -o CMakeFiles/FoX_fsys.dir/fox_m_fsys_format.F90.o
/usr/bin/cmake -E cmake_copy_f90_mod fox/include/fox_m_fsys_format.mod fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_format.mod.stamp GNU
/usr/bin/cmake -E touch fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_format.F90.o.provides.build
[  6%] Building Fortran object fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_parse_input.F90.o
cd /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys && /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/mpich-4.2.1-gtcnmvuhs6smxkg3kesurbqlygyw2x66/bin/mpif90 -DCESMCOUPLED -DFC_EOR_LF -DFC_HAVE_ABORT -DFC_HAVE_FLUSH -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -g -Wall -Og -fbacktrace -ffpe-trap=zero,overflow -fcheck=bounds  -DCESMCOUPLED -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/include -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include  -J../include -c /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90 -o CMakeFiles/FoX_fsys.dir/fox_m_fsys_parse_input.F90.o
/usr/bin/cmake -E cmake_copy_f90_mod fox/include/fox_m_fsys_parse_input.mod fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_parse_input.mod.stamp GNU
/usr/bin/cmake -E touch fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_parse_input.F90.o.provides.build
/usr/bin/cmake -E touch fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_realtypes.f90.o.provides.build
[  7%] Building Fortran object fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_string.F90.o
cd /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/fsys && /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/mpich-4.2.1-gtcnmvuhs6smxkg3kesurbqlygyw2x66/bin/mpif90 -DCESMCOUPLED -DFC_EOR_LF -DFC_HAVE_ABORT -DFC_HAVE_FLUSH -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS/fox/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -g -Wall -Og -fbacktrace -ffpe-trap=zero,overflow -fcheck=bounds  -DCESMCOUPLED -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/include -I/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include  -J../include -c /home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_string.F90 -o CMakeFiles/FoX_fsys.dir/fox_m_fsys_string.F90.o
make[2]: Leaving directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS'
make[1]: Leaving directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/CDEPS', error=f951: Warning: Nonexistent include directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include' [-Wmissing-include-dirs]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:440:42:

  440 |   pure function countcomplexdp(s, datatype) result(num)
      |                                          1
Warning: Unused dummy argument 'datatype' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:341:42:

  341 |   pure function countcomplexsp(s, datatype) result(num)
      |                                          1
Warning: Unused dummy argument 'datatype' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:346:16:

  346 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:346:19:

  346 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:290:39:

  290 |   pure function countrealdp(s, datatype) result(num)
      |                                       1
Warning: Unused dummy argument 'datatype' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:239:39:

  239 |   pure function countrealsp(s, datatype) result(num)
      |                                       1
Warning: Unused dummy argument 'datatype' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:192:24:

  192 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:194:16:

  194 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:186:40:

  186 |   pure function countinteger(s, datatype) result(num)
      |                                        1
Warning: Unused dummy argument 'datatype' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:193:16:

  193 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:193:19:

  193 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:194:13:

  194 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:136:40:

  136 |   pure function countlogical(s, datatype) result(num)
      |                                        1
Warning: Unused dummy argument 'datatype' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_count_parse_input.F90:29:39:

   29 |   pure function countstring(s, datatype, separator, csv) result(num)
      |                                       1
Warning: Unused dummy argument 'datatype' at (1) [-Wunused-dummy-argument]
f951: Warning: Nonexistent include directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include' [-Wmissing-include-dirs]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_format.F90:38:39:

   38 |   integer, parameter :: sig_dp = digits(1.0_dp)/4 ! Approximate precision worth outputting of each type.
      |                                       1
Warning: Integer division truncated to constant '13' at (1) [-Winteger-division]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_format.F90:201:2:

  201 |   pure function str_integer_array_len(ia) result(n)
      |  ^
Warning: 'str_integer_array_len' defined but not used [-Wunused-function]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_format.F90:230:2:

  230 |   pure function str_integer_matrix_len(ia) result(n)
      |  ^
Warning: 'str_integer_matrix_len' defined but not used [-Wunused-function]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_format.F90:187:14:

  187 |         return
      |              ^
Warning: 'n' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_format.F90:173:53:

  173 |   pure function str_integer_fmt_len(i, fmt) result(n)
      |                                                     ^
note: 'n' was declared here
f951: Warning: Nonexistent include directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include' [-Wmissing-include-dirs]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1956:19:

 1956 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1700:19:

 1700 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1619:24:

 1619 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1621:16:

 1621 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1621:13:

 1621 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1541:24:

 1541 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1543:16:

 1543 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1542:19:

 1542 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1543:13:

 1543 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1461:24:

 1461 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1463:16:

 1463 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1463:13:

 1463 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1383:24:

 1383 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1385:16:

 1385 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1384:19:

 1384 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1385:13:

 1385 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1303:24:

 1303 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1305:16:

 1305 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1305:13:

 1305 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1226:24:

 1226 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1228:16:

 1228 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1227:19:

 1227 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1228:13:

 1228 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1143:24:

 1143 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1145:16:

 1145 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1144:41:

 1144 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                                         1
Warning: Unused variable 'ios' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1145:13:

 1145 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1062:24:

 1062 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1064:16:

 1064 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1063:41:

 1063 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                                         1
Warning: Unused variable 'ios' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1063:19:

 1063 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:1064:13:

 1064 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:912:24:

  912 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:914:16:

  914 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:913:41:

  913 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                                         1
Warning: Unused variable 'ios' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:914:13:

  914 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:760:24:

  760 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:762:16:

  762 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:761:41:

  761 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                                         1
Warning: Unused variable 'ios' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:761:19:

  761 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:762:13:

  762 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:632:19:

  632 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:507:19:

  507 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:430:24:

  430 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:432:16:

  432 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:431:19:

  431 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:432:13:

  432 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:354:24:

  354 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:356:16:

  356 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:355:19:

  355 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:356:13:

  356 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:278:24:

  278 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:280:16:

  280 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:279:19:

  279 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:280:13:

  280 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:199:24:

  199 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:201:16:

  201 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:200:41:

  200 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                                         1
Warning: Unused variable 'ios' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:200:19:

  200 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:201:13:

  201 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:50:24:

   50 |     logical :: bracketed
      |                        1
Warning: Unused variable 'bracketed' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:52:16:

   52 |     real :: r, c
      |                1
Warning: Unused variable 'c' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:51:41:

   51 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                                         1
Warning: Unused variable 'ios' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:51:19:

   51 |     integer :: i, j, ij, k, s_i, err, ios, length
      |                   1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:52:13:

   52 |     real :: r, c
      |             1
Warning: Unused variable 'r' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:43:46:

   43 |   subroutine scalartostring(s, data, separator, csv, num, iostat)
      |                                              1
Warning: Unused dummy argument 'separator' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:955:27:

  955 |           s2(m:) = s(s_i:k)
      |                           ^
Warning: 'm' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:918:16:

  918 |     integer :: m
      |                ^
note: 'm' was declared here
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:802:27:

  802 |           s2(m:) = s(s_i:k)
      |                           ^
Warning: 'm' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:766:16:

  766 |     integer :: m
      |                ^
note: 'm' was declared here
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:92:27:

   92 |           s2(m:) = s(s_i:k)
      |                           ^
Warning: 'm' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/cam_scam_gfortran_debug_test/components/cdeps/fox/fsys/fox_m_fsys_parse_input.F90:56:16:

   56 |     integer :: m
      |                ^
note: 'm' was declared here
f951: Warning: Nonexistent include directory '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/gnu/mpich/debug/nothreads/nuopc/esmf/c1a1l1i1o1/include' [-Wmissing-include-dirs]
Assembler messages:
Fatal error: can't create CMakeFiles/FoX_fsys.dir/fox_m_fsys_string.F90.o: No such file or directory
make[2]: *** [fox/fsys/CMakeFiles/FoX_fsys.dir/build.make:157: fox/fsys/CMakeFiles/FoX_fsys.dir/fox_m_fsys_string.F90.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:1173: fox/fsys/CMakeFiles/FoX_fsys.dir/all] Error 2
make: *** [Makefile:136: all] Error 2

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/scripts/test_scam_ATEX/./case.build", line 267, in <module>
    _main_func(__doc__)
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/scripts/test_scam_ATEX/./case.build", line 251, in _main_func
    success = build.case_build(
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/build.py", line 1321, in case_build
    return run_and_log_case_status(functor, cb, caseroot=caseroot)
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/utils.py", line 2482, in run_and_log_case_status
    rv = func()
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/build.py", line 1305, in <lambda>
    functor = lambda: _case_build_impl(
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/build.py", line 1195, in _case_build_impl
    logs = _build_libraries(
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/build.py", line 834, in _build_libraries
    run_sub_or_cmd(
  File "/home/jenkins/workspace/cam_scam_gfortran_debug_test/cime/CIME/utils.py", line 716, in run_sub_or_cmd
    with open(logfile, "a") as log_fd:
FileNotFoundError: [Errno 2] No such file or directory: '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/CDEPS.bldlog.260218-002501'
Error building CAM
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run ARM97 with SILHS)
Stage "Run ARM97 with SILHS" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] sh
+ chmod -R 755 /home/jenkins/cam_output/
[Pipeline] sh
+ gzip -d '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/cesm.bldlog.*.gz'
gzip: /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/cesm.bldlog.*.gz: No such file or directory
[Pipeline] echo
ATEX WARNING: One or more of the build logs were not zipped, this means compilation did not finish
[Pipeline] sh
+ gzip -d '/home/jenkins/cam_output/scratch/test_scam_ATEX/run/cesm.log.*.gz'
gzip: /home/jenkins/cam_output/scratch/test_scam_ATEX/run/cesm.log.*.gz: No such file or directory
[Pipeline] echo
ATEX WARNING: One or more of the run logs were not zipped, this means the code did not run to completion
[Pipeline] sh
+ cat '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/cesm.bldlog.*'
cat: '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/cesm.bldlog.*': No such file or directory
[Pipeline] echo
ATEX WARNING: One of the log files (build or run) were not found - the failure must have occured before their creation
[Pipeline] sh
+ gzip -d '/home/jenkins/cam_output/scratch/test_scam_ARM97/bld/cesm.bldlog.*.gz'
gzip: /home/jenkins/cam_output/scratch/test_scam_ARM97/bld/cesm.bldlog.*.gz: No such file or directory
[Pipeline] echo
ARM97 WARNING: One or more of the build logs were not zipped, this means compilation did not finish
[Pipeline] sh
+ gzip -d '/home/jenkins/cam_output/scratch/test_scam_ARM97/run/cesm.log.*.gz'
gzip: /home/jenkins/cam_output/scratch/test_scam_ARM97/run/cesm.log.*.gz: No such file or directory
[Pipeline] echo
ARM97 WARNING: One or more of the run logs were not zipped, this means the code did not run to completion
[Pipeline] sh
+ cat '/home/jenkins/cam_output/scratch/test_scam_ARM97/bld/cesm.bldlog.*'
cat: '/home/jenkins/cam_output/scratch/test_scam_ARM97/bld/cesm.bldlog.*': No such file or directory
[Pipeline] echo
ARM97 WARNING: One of the log files (build or run) were not found - the failure must have occured before their creation
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] emailext
Sending email to: messnermet@uwm.edu
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE