Started by user Gunther HueblerhueblerGunther Huebler746fc57497840efaa7acc394c10ac9c6892ef162206fc57497840efaa7acc394c10ac9c6892ef16220origin/clubb_silhs_devel6fc57497840efaa7acc394c10ac9c6892ef162206fc57497840efaa7acc394c10ac9c6892ef16220origin/clubb_silhs_devel69cca799cfb394e7eeadc21211ae811b4a370d31eecca799cfb394e7eeadc21211ae811b4a370d31eeorigin/changes_to_not_breakcca799cfb394e7eeadc21211ae811b4a370d31eecca799cfb394e7eeadc21211ae811b4a370d31eeorigin/changes_to_not_break304af26a1e7043039165c090c95676d48e6d2f726b5af26a1e7043039165c090c95676d48e6d2f726b5refs/remotes/origin/clubb_silhs_develaf26a1e7043039165c090c95676d48e6d2f726b5af26a1e7043039165c090c95676d48e6d2f726b5refs/remotes/origin/clubb_silhs_develaf26a1e7043039165c090c95676d48e6d2f726b5af26a1e7043039165c090c95676d48e6d2f726b5refs/remotes/origin/clubb_silhs_develhttps://github.com/larson-group/cam.gitfalse#304930721992202cam_global_ERP_Ln9_gfortran_test #304304false30425627FAILURE1696025142037http://carson.math.uwm.edu/jenkins/view/all/job/cam_global_ERP_Ln9_gfortran_test/304/doc/ChangeLog28115b33951f656eb49663e1c941f0d191dd489a1647475802000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduinitial changelog updates 2022-03-16 18:10:02 -060028115b33951f656eb49663e1c941f0d191dd489ainitial changelog updateseditdoc/ChangeLogdoc/ChangeLog23b6274bb4d9b54486cdee00401e868ba1af8b2f1647547022000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduaddress review comments; changelog updates 2022-03-17 13:57:02 -060023b6274bb4d9b54486cdee00401e868ba1af8b2faddress review comments; changelog updateseditdoc/ChangeLogsrc/physics/cam/clubb_intr.F90Externals_CAM.cfgsrc/physics/cam/subcol_SILHS.F900a572ab4a083c7fea7043f833c91fefa234d46781647574546000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdate to head of larson-group cam 2022-03-17 21:35:46 -06000a572ab4a083c7fea7043f833c91fefa234d4678Update to head of larson-group cameditsrc/physics/cam/clubb_intr.F90editsrc/physics/cam/subcol_SILHS.F90editExternals_CAM.cfgsrc/physics/cam/clubb_intr.F9015cb0ec531ae9d0414f844e6a2361291f0627dab1647642244000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChanges for the nag compiler and less output 2022-03-18 16:24:04 -060015cb0ec531ae9d0414f844e6a2361291f0627dabChanges for the nag compiler and less outputeditsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_definition.xmlbld/build-namelistsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xmlfbca529bb86a59a30b7f2e3c1ddc286c8f1909ac1647643954000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduNamelist changes for Issue 467 2022-03-18 16:52:34 -0600fbca529bb86a59a30b7f2e3c1ddc286c8f1909acNamelist changes for Issue 467editbld/build-namelisteditsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F9082ff3c8d5e155e7939cfbc998dc9cd6ecfb16ea71647646546000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChanges to address issues 467 and 461 2022-03-18 17:35:46 -060082ff3c8d5e155e7939cfbc998dc9cd6ecfb16ea7Changes to address issues 467 and 461editsrc/physics/cam/clubb_intr.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F9067c0127b48d25f80ed4ddbbeaa35192ab6e5a36e1647699032000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix deferred functions issue (for NAG) modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 2022-03-19 08:10:32 -060067c0127b48d25f80ed4ddbbeaa35192ab6e5a36efix deferred functions issue (for NAG)editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90src/physics/waccm/nlte_aliarms.F90cime_config/testdefs/testlist_cam.xmlsrc/physics/cam/restart_physics.F90src/physics/waccm/nlte_lw.F904f17bbbc417fbcba3d67eeb735407f7cba2278291647892552000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd restart capabilities and regression test 2022-03-21 13:55:52 -06004f17bbbc417fbcba3d67eeb735407f7cba227829Add restart capabilities and regression testeditcime_config/testdefs/testlist_cam.xmleditsrc/physics/waccm/nlte_aliarms.F90editsrc/physics/cam/restart_physics.F90editsrc/physics/waccm/nlte_lw.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/shell_commandssrc/ionosphere/waccmx/edyn_init.F90src/ionosphere/waccmx/edyn_mpi.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_camsrc/ionosphere/waccmx/edynamo.F90aa567ac55edf02322f0d078e88d791fe6d81123d1647958502000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduAdd Hall and Pedersen Conductance diagnostics modified: src/ionosphere/waccmx/edyn_init.F90 modified: src/ionosphere/waccmx/edyn_mpi.F90 modified: src/ionosphere/waccmx/edynamo.F90 new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_cam 2022-03-22 08:15:02 -0600aa567ac55edf02322f0d078e88d791fe6d81123dAdd Hall and Pedersen Conductance diagnosticsaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/shell_commandseditsrc/ionosphere/waccmx/edyn_mpi.F90editsrc/ionosphere/waccmx/edynamo.F90editsrc/ionosphere/waccmx/edyn_init.F90Externals.cfg225abcb6740a4ffb1c9bbfe096917b613d807a721647973235000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate externals to match cesm2_3_beta08 2022-03-22 12:20:35 -0600225abcb6740a4ffb1c9bbfe096917b613d807a72Update externals to match cesm2_3_beta08editExternals.cfgdoc/ChangeLog572a3b84a48cdd758a7fb7edc6a871de6d9da20a1647982263000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduPreliminary ChangeLog 2022-03-22 14:51:03 -0600572a3b84a48cdd758a7fb7edc6a871de6d9da20aPreliminary ChangeLogeditdoc/ChangeLogcime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_cambld/namelist_files/use_cases/waccmx_ma_hist_cam6.xmlbld/namelist_files/use_cases/waccmxie_ma_2000_cam4.xmlbld/namelist_files/use_cases/1950-2010_ccmi_refc1_waccmx_ma.xmlsrc/ionosphere/waccmx/edyn_init.F90bld/namelist_files/use_cases/sd_waccmx_ma_cam6.xmlsrc/ionosphere/waccmx/edynamo.F90bld/namelist_files/use_cases/sd_waccmx_ma_cam4.xmlbld/namelist_files/use_cases/waccmx_ma_2000_cam6.xmled1291408633c68b53a1e4b3194a5b585d71158c1647985803000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduRemove EDYN_ZIGM2_HAL and EDYN_ZIGM11_PED, replace with HALL_CONDUCTANCE and PED_CONDUCTANCE modified: bld/namelist_files/use_cases/1950-2010_ccmi_refc1_waccmx_ma.xml modified: bld/namelist_files/use_cases/sd_waccmx_ma_cam4.xml modified: bld/namelist_files/use_cases/sd_waccmx_ma_cam6.xml modified: bld/namelist_files/use_cases/waccmx_ma_2000_cam6.xml modified: bld/namelist_files/use_cases/waccmx_ma_hist_cam6.xml modified: bld/namelist_files/use_cases/waccmxie_ma_2000_cam4.xml modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_cam modified: src/ionosphere/waccmx/edyn_init.F90 modified: src/ionosphere/waccmx/edynamo.F90 2022-03-22 15:50:03 -0600ed1291408633c68b53a1e4b3194a5b585d71158cRemove EDYN_ZIGM2_HAL and EDYN_ZIGM11_PED, replace with HALL_CONDUCTANCE and PED_CONDUCTANCEeditbld/namelist_files/use_cases/1950-2010_ccmi_refc1_waccmx_ma.xmleditsrc/ionosphere/waccmx/edyn_init.F90editbld/namelist_files/use_cases/waccmx_ma_2000_cam6.xmleditbld/namelist_files/use_cases/waccmx_ma_hist_cam6.xmleditcime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_cameditbld/namelist_files/use_cases/sd_waccmx_ma_cam6.xmleditbld/namelist_files/use_cases/waccmxie_ma_2000_cam4.xmleditbld/namelist_files/use_cases/sd_waccmx_ma_cam4.xmleditsrc/ionosphere/waccmx/edynamo.F90src/ionosphere/waccmx/edyn_init.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_camsrc/ionosphere/waccmx/edynamo.F9009a5d30be37659139c574d0a923eae5ec7f838821647989163000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduminor changes deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/shell_commands deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_cam modified: src/ionosphere/waccmx/edyn_init.F90 modified: src/ionosphere/waccmx/edynamo.F90 2022-03-22 16:46:03 -060009a5d30be37659139c574d0a923eae5ec7f83882minor changeseditsrc/ionosphere/waccmx/edynamo.F90deletecime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/user_nl_cameditsrc/ionosphere/waccmx/edyn_init.F90deletecime_config/testdefs/testmods_dirs/cam/outfrq9s_conductance/shell_commandscime_config/testdefs/testmods_dirs/cam/ttrac_loadbal3/shell_commandscime_config/testdefs/testmods_dirs/cam/scm_prep/shell_commandscime_config/testdefs/testmods_dirs/cam/silhs/shell_commandscime_config/testdefs/testmods_dirs/cam/terminator/shell_commandscime_config/testdefs/testmods_dirs/cam/ttrac_loadbal1/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq3s_ttrac/shell_commandscime_config/testdefs/testmods_dirs/cam/idphys/shell_commandscime_config/testdefs/testmods_dirs/cam/ttrac_loadbal0/shell_commandsdoc/ChangeLogcime_config/testdefs/testmods_dirs/cam/outfrq3s_eoyttrac/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq24h_port/shell_commandscime_config/testdefs/testmods_dirs/cam/scm_prep_c6/shell_commandsb8421fe78fc808978b8dfb657be12c1ef96760911647989277000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate STARTDATE year from 0000 to 0001 to fix failure in CLM 2022-03-22 16:47:57 -0600b8421fe78fc808978b8dfb657be12c1ef9676091Update STARTDATE year from 0000 to 0001 to fix failure in CLMeditcime_config/testdefs/testmods_dirs/cam/scm_prep_c6/shell_commandseditcime_config/testdefs/testmods_dirs/cam/silhs/shell_commandseditdoc/ChangeLogeditcime_config/testdefs/testmods_dirs/cam/outfrq3s_ttrac/shell_commandseditcime_config/testdefs/testmods_dirs/cam/terminator/shell_commandseditcime_config/testdefs/testmods_dirs/cam/outfrq3s_eoyttrac/shell_commandseditcime_config/testdefs/testmods_dirs/cam/ttrac_loadbal3/shell_commandseditcime_config/testdefs/testmods_dirs/cam/idphys/shell_commandseditcime_config/testdefs/testmods_dirs/cam/outfrq24h_port/shell_commandseditcime_config/testdefs/testmods_dirs/cam/scm_prep/shell_commandseditcime_config/testdefs/testmods_dirs/cam/ttrac_loadbal0/shell_commandseditcime_config/testdefs/testmods_dirs/cam/ttrac_loadbal1/shell_commandsdoc/ChangeLogbcf89cb1297a43d69a1869d3c9e289b3fabb931d1648063194000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog 2022-03-23 13:19:54 -0600bcf89cb1297a43d69a1869d3c9e289b3fabb931dUpdate ChangeLogeditdoc/ChangeLogsrc/physics/waccm/nlte_aliarms.F90src/physics/waccm/nlte_lw.F902ebebf4a4bf4aa3660deb9fa8b0317e09b9deb111648137856000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMinor updates 2022-03-24 10:04:16 -06002ebebf4a4bf4aa3660deb9fa8b0317e09b9deb11Minor updateseditsrc/physics/waccm/nlte_lw.F90editsrc/physics/waccm/nlte_aliarms.F90cime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_apmee/user_nl_cam92a61659af100df07f9bfe2da9b035df9adcc2e21648143098000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduSetup ALI-ARMS regression test 2022-03-24 11:31:38 -060092a61659af100df07f9bfe2da9b035df9adcc2e2Setup ALI-ARMS regression testeditcime_config/testdefs/testlist_cam.xmleditcime_config/testdefs/testmods_dirs/cam/outfrq9s_apmee/user_nl_camExternals.cfga1b5bafd4d7a38ac7c89062fbb8dfedd1da0621f1648503842000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduupdate ccs_config_cesm tag 2022-03-28 15:44:02 -0600a1b5bafd4d7a38ac7c89062fbb8dfedd1da0621fupdate ccs_config_cesm tageditExternals.cfgcime_config/testdefs/testmods_dirs/cam/scm_prep_c6/shell_commandssrc/cpl/nuopc/atm_comp_nuopc.F90c5678ef2876ca20b97a61b5939669c06f60e8b4c1648591794000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduadd nuopc restart change and associated test 2022-03-29 16:09:54 -0600c5678ef2876ca20b97a61b5939669c06f60e8b4cadd nuopc restart change and associated testeditcime_config/testdefs/testmods_dirs/cam/scm_prep_c6/shell_commandseditsrc/cpl/nuopc/atm_comp_nuopc.F90src/ionosphere/waccmx/dpie_coupling.F903e8a22911a2390644435d3fd198df773e7feefe71648622834000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne6.cheyenne.ucar.edumove t_startf call 2022-03-30 00:47:14 -06003e8a22911a2390644435d3fd198df773e7feefe7move t_startf calleditsrc/ionosphere/waccmx/dpie_coupling.F90src/dynamics/fv/metdata.F902a6933c7f130d3fad15b61b8ae57880d555c35f71648676685000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduFix for SD driven by ERA5 data (issue #207) Need to check for fill_value in sea ice fraction for dry dep modified: src/dynamics/fv/metdata.F90 2022-03-30 15:44:45 -06002a6933c7f130d3fad15b61b8ae57880d555c35f7Fix for SD driven by ERA5 data (issue #207)editsrc/dynamics/fv/metdata.F90cime_config/SystemTests/sct.pydc626f31c98607ebef372dd8dcf6c982fb03113d1648681386000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduspecify PTS_MODE only for mct driver 2022-03-30 17:03:06 -0600dc626f31c98607ebef372dd8dcf6c982fb03113dspecify PTS_MODE only for mct drivereditcime_config/SystemTests/sct.pysrc/chemistry/mozart/mo_extfrc.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/mo_srf_emissions.F90ffe62f247e6d7fae3f296804ba997bd6069badda1648684452000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edua fix for limited num of emissions files (issue #538) modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/mo_extfrc.F90 modified: src/chemistry/mozart/mo_srf_emissions.F90 2022-03-30 17:54:12 -0600ffe62f247e6d7fae3f296804ba997bd6069baddaa fix for limited num of emissions files (issue #538)editsrc/chemistry/mozart/mo_srf_emissions.F90editsrc/chemistry/mozart/mo_extfrc.F90editsrc/chemistry/mozart/chemistry.F90src/chemistry/mozart/mo_extfrc.F90src/chemistry/mozart/mo_srf_emissions.F901aef6b38fbb6dc9832b5c1a0ae587d914c983f4b1648737881000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd log message with file names modified: src/chemistry/mozart/mo_extfrc.F90 modified: src/chemistry/mozart/mo_srf_emissions.F90 2022-03-31 08:44:41 -06001aef6b38fbb6dc9832b5c1a0ae587d914c983f4badd log message with file nameseditsrc/chemistry/mozart/mo_extfrc.F90editsrc/chemistry/mozart/mo_srf_emissions.F90src/physics/.clubb_sparse_checkoutbld/configureExternals_CAM.cfgsrc/physics/.silhs_sparse_checkoutdcb913f4fd8248eff757ef3232116e2c28fb748a1648741338000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChange sparse checkout to svn specific checkout 2022-03-31 09:42:18 -0600dcb913f4fd8248eff757ef3232116e2c28fb748aChange sparse checkout to svn specific checkouteditExternals_CAM.cfgdeletesrc/physics/.clubb_sparse_checkouteditbld/configuredeletesrc/physics/.silhs_sparse_checkoutsrc/cpl/nuopc/atm_comp_nuopc.F90cime_config/testdefs/testmods_dirs/cam/scm_prep_c6/shell_commands069aef15231c503144e8686d3c91af1c63766c7c1648742827000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduback out nuopc restart changes 2022-03-31 10:07:07 -0600069aef15231c503144e8686d3c91af1c63766c7cback out nuopc restart changeseditsrc/cpl/nuopc/atm_comp_nuopc.F90editcime_config/testdefs/testmods_dirs/cam/scm_prep_c6/shell_commandssrc/dynamics/fv/te_map.F90bbc05c083dbbb2d81731c9da1e9b6e57381651a81648743425000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.edufix typo in te_map 2022-03-31 10:17:05 -0600bbc05c083dbbb2d81731c9da1e9b6e57381651a8fix typo in te_mapeditsrc/dynamics/fv/te_map.F90Externals_CAM.cfg33429df1c0da267bbb9f359032b9782e9ec8b11f1648744043000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduOops, forgot the path to SILHS 2022-03-31 10:27:23 -060033429df1c0da267bbb9f359032b9782e9ec8b11fOops, forgot the path to SILHSeditExternals_CAM.cfgdoc/ChangeLogExternals.cfg7dbe2506a3c64e1f3fbddc7d07f6df6d3e38f1371648759568000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduinitial changelog updates 2022-03-31 14:46:08 -06007dbe2506a3c64e1f3fbddc7d07f6df6d3e38f137initial changelog updateseditdoc/ChangeLogeditExternals.cfgsrc/chemistry/mozart/chemistry.F904fd8b018ab62cc5d9a448a844560a094215253ca1648826042000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadjust size of max_num_emis_files modified: src/chemistry/mozart/chemistry.F90 2022-04-01 09:14:02 -06004fd8b018ab62cc5d9a448a844560a094215253caadjust size of max_num_emis_fileseditsrc/chemistry/mozart/chemistry.F90src/physics/cam/ndrop.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F905be931c041f040f43c40bd591f51ab00092ae7cb1648846751000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd some documentation for properties interface modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/physics/cam/ndrop.F90 2022-04-01 14:59:11 -06005be931c041f040f43c40bd591f51ab00092ae7cbadd some documentation for properties interfaceeditsrc/physics/cam/ndrop.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90src/physics/cam/micro_mg_cam.F90src/physics/cam/nucleate_ice.F9089382ee92da5dbe45e8e618a658896acce503d621648853434000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd subsetting for columns 2022-04-01 16:50:34 -060089382ee92da5dbe45e8e618a658896acce503d62Add subsetting for columnseditsrc/physics/cam/micro_mg_cam.F90editsrc/physics/cam/nucleate_ice.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/chemistry/aerosol/aerosol_state_mod.F909da6b6a1205b57967b105d293e1ac359b28c09fa1648853707000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd some documentation for aerosol state interface modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 2022-04-01 16:55:07 -06009da6b6a1205b57967b105d293e1ac359b28c09faadd some documentation for aerosol state interfaceeditsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90Externals_CAM.cfg282170a7ce94ab7e1d9ab1e3e62eb734b2648a4d1648998183000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate HEMCO external to ESCOMP 2022-04-03 11:03:03 -0400282170a7ce94ab7e1d9ab1e3e62eb734b2648a4dUpdate HEMCO external to ESCOMPeditExternals_CAM.cfgExternals.cfgcime_config/testdefs/testlist_cam.xmldoc/ChangeLogcime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/shell_commands9cf0f9b05eedf7f6630fa7a3830f44e3db083d451649090978000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduupdates cime external; update NTASKS for outfrq9s_refined_camchem 2022-04-04 10:49:38 -06009cf0f9b05eedf7f6630fa7a3830f44e3db083d45updates cime external; update NTASKS for outfrq9s_refined_camchemeditcime_config/testdefs/testlist_cam.xmleditdoc/ChangeLogeditExternals.cfgeditcime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq3s_usecase/user_nl_camcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/idphys/user_nl_clmcime_config/testdefs/testmods_dirs/cam/idphys/shell_commandsdoc/ChangeLogcime_config/testdefs/testmods_dirs/cam/idphys/user_nl_camcime_config/testdefs/testmods_dirs/cam/idphys/user_nl_cpl0403c263957a659ab896ebbe1d68a13a475cef8f1649097469000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduremove idphys tests; update outfrq3s_usecase tests to cover previous idphys tests; changelog updates 2022-04-04 12:37:49 -06000403c263957a659ab896ebbe1d68a13a475cef8fremove idphys tests; update outfrq3s_usecase tests to cover previous idphys tests; changelog updateseditcime_config/testdefs/testmods_dirs/cam/outfrq3s_usecase/user_nl_cameditcime_config/testdefs/testlist_cam.xmleditdoc/ChangeLogdeletecime_config/testdefs/testmods_dirs/cam/idphys/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/idphys/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/idphys/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/idphys/user_nl_cplExternals.cfgdoc/ChangeLogcime_config/testdefs/testlist_cam.xmldoc/ChangeLog_template4ebc6b805e9080595cfb91f667fa5028d1d8fc371649264735000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduupdate ccs_config external; add mct tests for aquaplanet SCAM tests 2022-04-06 11:05:35 -06004ebc6b805e9080595cfb91f667fa5028d1d8fc37update ccs_config external; add mct tests for aquaplanet SCAM testseditdoc/ChangeLog_templateeditExternals.cfgeditdoc/ChangeLogeditcime_config/testdefs/testlist_cam.xmlExternals_CAM.cfgcime_config/testdefs/testmods_dirs/cam/carma_pmc/user_nl_camcime_config/testdefs/testlist_cam.xmlsrc/physics/carma/models/test_growth/carma_model_mod.F907cbfb843b0a52a515470cd52a32d3884fccd7aba1649267000000http://carson.math.uwm.edu/jenkins/user/mlandermlandermlander@ucar.eduCommitting changes to carma_pmc/user_nl_cam and test_growth/carma_model_mod.F90 2022-04-06 11:43:20 -06007cbfb843b0a52a515470cd52a32d3884fccd7abaCommitting changes to carma_pmc/user_nl_cam and test_growth/carma_model_mod.F90editcime_config/testdefs/testlist_cam.xmleditExternals_CAM.cfgeditsrc/physics/carma/models/test_growth/carma_model_mod.F90editcime_config/testdefs/testmods_dirs/cam/carma_pmc/user_nl_camExternals.cfgdoc/ChangeLogsrc/cpl/nuopc/atm_comp_nuopc.F902b14100bb4b68b5eb5a4d91e79ba22c66764aa951649282928000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.edufinal changelog updates; return to old ccs_config tag; update atm_comp_nuopc to enable SCT tests to run 2022-04-06 16:08:48 -06002b14100bb4b68b5eb5a4d91e79ba22c66764aa95final changelog updates; return to old ccs_config tag; update atm_comp_nuopc to enable SCT tests to runeditExternals.cfgeditsrc/cpl/nuopc/atm_comp_nuopc.F90editdoc/ChangeLogsrc/physics/cam/micro_mg_cam.F90f0be7254fa0feb8a9df61387799b99b1359ce3671649285987000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAssign nlev to pver and remove top_lev:nlev subsetting 2022-04-06 16:59:47 -0600f0be7254fa0feb8a9df61387799b99b1359ce367Assign nlev to pver and remove top_lev:nlev subsettingeditsrc/physics/cam/micro_mg_cam.F90bld/configurebld/namelist_files/namelist_definition.xmlbld/build-namelistbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/clubb_intr.F90bld/config_files/definition.xmle6e2f6466a7d235af7b906a6c264ba35319132821649363503000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduNamelist updates and modifiers, adds Lscale option to config and ipdf_call_placement 2022-04-07 14:31:43 -0600e6e2f6466a7d235af7b906a6c264ba3531913282Namelist updates and modifiers, adds Lscale option to config and ipdf_call_placementeditbld/build-namelisteditbld/config_files/definition.xmleditbld/namelist_files/namelist_definition.xmleditbld/configureeditbld/namelist_files/namelist_defaults_cam.xmleditsrc/physics/cam/clubb_intr.F90src/physics/cam/micro_mg_cam.F90c542e30e9b7440b19396d0f06da64c4aaf426cc51649443624000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove local state_loc_X variables and initialize a few more 2022-04-08 12:47:04 -0600c542e30e9b7440b19396d0f06da64c4aaf426cc5Remove local state_loc_X variables and initialize a few moreeditsrc/physics/cam/micro_mg_cam.F90src/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xmlcfd361263bd8bd8e19f461d7ac481bc3dee310e31649459140000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdates to defaults and remove some comments 2022-04-08 17:05:40 -0600cfd361263bd8bd8e19f461d7ac481bc3dee310e3Updates to defaults and remove some commentseditsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/subcol_SILHS.F90914f0883203c411a7cada7c854bb5a2d8460dd101649715481000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdate open statements and change _OPENACC ifdef 2022-04-11 16:18:01 -0600914f0883203c411a7cada7c854bb5a2d8460dd10Update open statements and change _OPENACC ifdefeditsrc/physics/cam/subcol_SILHS.F90src/physics/cam/micro_mg_cam.F9020b1d9eab5559f5c91b2c6b801c4823b6e24b6ff1649720447000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix a few more missing :mgncol in call to micro_mg_cam 2022-04-11 17:40:47 -060020b1d9eab5559f5c91b2c6b801c4823b6e24b6ffFix a few more missing :mgncol in call to micro_mg_cameditsrc/physics/cam/micro_mg_cam.F90cime_config/testdefs/testlist_cam.xml38402499746afced16674a297fe666bac4af6d841649860982000http://carson.math.uwm.edu/jenkins/user/mlandermlandermlander@ucar.edusetting pmc test to ERS to avoid failure 2022-04-13 08:43:02 -060038402499746afced16674a297fe666bac4af6d84setting pmc test to ERS to avoid failureeditcime_config/testdefs/testlist_cam.xmlsrc/cpl/nuopc/atm_comp_nuopc.F90src/cpl/nuopc/atm_import_export.F90df15ce1244e289f3b7ca2e86eedf236a61f73bab1649862042000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.educhanges to fix scam - also need a cmeps update 2022-04-13 09:00:42 -0600df15ce1244e289f3b7ca2e86eedf236a61f73babchanges to fix scam - also need a cmeps updateeditsrc/cpl/nuopc/atm_comp_nuopc.F90editsrc/cpl/nuopc/atm_import_export.F90src/ionosphere/waccmx/amie_module.F906385fdf4ad9b6ffd75fc30500f56080a55cf062a1649862772000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix for multiday AMIE time interpolation bug modified: src/ionosphere/waccmx/amie_module.F90 2022-04-13 09:12:52 -06006385fdf4ad9b6ffd75fc30500f56080a55cf062afix for multiday AMIE time interpolation bugeditsrc/ionosphere/waccmx/amie_module.F90bld/configurebld/namelist_files/namelist_defaults_cam.xmlbld/build-namelist412189c5fd4d9408c655cd920f8066ea327dcc151649889587000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduRe-doing Lscale namelist settings 2022-04-13 16:39:47 -0600412189c5fd4d9408c655cd920f8066ea327dcc15Re-doing Lscale namelist settingseditbld/build-namelisteditbld/configureeditbld/namelist_files/namelist_defaults_cam.xmlbld/configuresrc/physics/cam_dev/physpkg.F90src/physics/cam/subcol_SILHS.F90src/physics/cam/physpkg.F90bld/config_files/definition.xmld9a28af160d3a9542c2f18b1d5a66a3734da96971649974570000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduFinish configure roll back, move acc directives, finish remove getunit, update cam_dev physpkg with changes from this PR 2022-04-14 16:16:10 -0600d9a28af160d3a9542c2f18b1d5a66a3734da9697Finish configure roll back, move acc directives, finish remove getunit, update cam_dev physpkg with changes from this PReditsrc/physics/cam/subcol_SILHS.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam_dev/physpkg.F90editbld/config_files/definition.xmleditbld/configurecime_config/SystemTests/sct.py0c0b55050ae53d4f754c21ba28379acbc2e73b391650036913000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix SCT test script 2022-04-15 09:35:13 -06000c0b55050ae53d4f754c21ba28379acbc2e73b39Fix SCT test scripteditcime_config/SystemTests/sct.pysrc/physics/cam/micro_pumas_cam.F901fb17450d1a686fca2e6995ade207d8d8a40a8f11650052849000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove unneeded code 2022-04-15 14:00:49 -06001fb17450d1a686fca2e6995ade207d8d8a40a8f1Remove unneeded codeeditsrc/physics/cam/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F901fa73091dbcc94cff546c9e4d66e2890fb235ee81650062964000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdditional cleanup and apply mods to cam_dev version 2022-04-15 16:49:24 -06001fa73091dbcc94cff546c9e4d66e2890fb235ee8Additional cleanup and apply mods to cam_dev versioneditsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F9005cab797e44ca0548709f6148ab60a6e805919a81650320024000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFurther cleanup when differenced with cam6_3_055 2022-04-18 16:13:44 -060005cab797e44ca0548709f6148ab60a6e805919a8Further cleanup when differenced with cam6_3_055editsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90Externals.cfgbe19d5a0fa1869308892771dca99193887295cd11650390746000http://carson.math.uwm.edu/jenkins/user/sunjiansunjiansunjian@ucar.eduUpdate CICE/CIME/CCS_CONFIG to make ERP run work properly modified: Externals.cfg 2022-04-19 11:52:26 -0600be19d5a0fa1869308892771dca99193887295cd1Update CICE/CIME/CCS_CONFIG to make ERP run work properlyeditExternals.cfgcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/shell_commandscime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/shell_commandsffc89c184642f55d18628281e20b5532ae3500e41650395092000http://carson.math.uwm.edu/jenkins/user/sunjiansunjiansunjian@ucar.eduAdd new GPU test suite for PUMAS modified: cime_config/testdefs/testlist_cam.xml new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/shell_commands renamed: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_cam -> cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/user_nl_cam renamed: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_clm -> cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/user_nl_clm renamed: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/shell_commands -> cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/user_nl_clm new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/user_nl_clm new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/user_nl_clm 2022-04-19 13:04:52 -0600ffc89c184642f55d18628281e20b5532ae3500e4Add new GPU test suite for PUMASaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/shell_commandseditcime_config/testdefs/testlist_cam.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_clmtest/system/test_driver.sh8586311fdcbae09a7db5b20d199ebfa51523b3b51650395269000http://carson.math.uwm.edu/jenkins/user/sunjiansunjiansunjian@ucar.eduUpdate the test_driver for Casper modified: test/system/test_driver.sh 2022-04-19 13:07:49 -06008586311fdcbae09a7db5b20d199ebfa51523b3b5Update the test_driver for Casperedittest/system/test_driver.shsrc/physics/cam/subcol_SILHS.F903b1da062e781a902f0972a8549400f5165e41d861650399676000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduRemoving two more freeunit calls that snuck in there. 2022-04-19 14:21:16 -06003b1da062e781a902f0972a8549400f5165e41d86Removing two more freeunit calls that snuck in there.editsrc/physics/cam/subcol_SILHS.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F90f2125aeea39a786910d8333b93658e0f367708fd1650473223000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix issues introduced during cleanup 2022-04-20 10:47:03 -0600f2125aeea39a786910d8333b93658e0f367708fdFix issues introduced during cleanupeditsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90c11dbbc01c761bb554bcaa0ddf59072e660996d11650554708000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduPut back a couple of intializations and correct another typo 2022-04-21 09:25:08 -0600c11dbbc01c761bb554bcaa0ddf59072e660996d1Put back a couple of intializations and correct another typoeditsrc/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F909935a89e3392caecbfa8bbdbdbcb42ea6164553c1650555760000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduinitialize a couple of variables in cam_dev 2022-04-21 09:42:40 -06009935a89e3392caecbfa8bbdbdbcb42ea6164553cinitialize a couple of variables in cam_deveditsrc/physics/cam_dev/micro_pumas_cam.F90bld/namelist_files/namelist_defaults_cam.xmlf10d173697dd1261d9747be443693c3b97d68fa41650563569000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChanged default clubb_l_e3sm_config to false 2022-04-21 11:52:49 -0600f10d173697dd1261d9747be443693c3b97d68fa4Changed default clubb_l_e3sm_config to falseeditbld/namelist_files/namelist_defaults_cam.xmlExternals.cfgsrc/physics/cam/physics_types.F90src/physics/cam/physpkg.F90src/physics/cam/check_energy.F90c410f0ae0998488c1a1146c4f3c9fe3bca0aa0611650565840000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.cominitial commit of ebudget code 2022-04-21 12:30:40 -0600c410f0ae0998488c1a1146c4f3c9fe3bca0aa061initial commit of ebudget codeeditExternals.cfgeditsrc/physics/cam/check_energy.F90editsrc/physics/cam/physics_types.F90editsrc/physics/cam/physpkg.F90src/dynamics/se/dyn_grid.F90src/utils/cam_grid_support.F906aeaacb30f3e443d09677eaf3b07a8fc10e990a61650568226000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadd cam6_3_044 mods to dyn_grid and cam_grid_support to support writes to GLL grid 2022-04-21 13:10:26 -06006aeaacb30f3e443d09677eaf3b07a8fc10e990a6add cam6_3_044 mods to dyn_grid and cam_grid_support to support writes to GLL grideditsrc/utils/cam_grid_support.F90editsrc/dynamics/se/dyn_grid.F90src/physics/cam/check_energy.F9060acd6c9db5bc0ccb24d86d4750ade4702b26db71650573008000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comfix bug in budgeting logic when dynamic energy variables are not output to history 2022-04-21 14:30:08 -060060acd6c9db5bc0ccb24d86d4750ade4702b26db7fix bug in budgeting logic when dynamic energy variables are not output to historyeditsrc/physics/cam/check_energy.F90Externals.cfg9c9e41d3f3ec5c7cb99867a2b88de9f31947c5111650581828000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduupdate externals 2022-04-21 16:57:08 -06009c9e41d3f3ec5c7cb99867a2b88de9f31947c511update externalseditExternals.cfgcime_config/testdefs/testlist_cam.xml8b6825d4dcd5e6f435bfb43b28b7393a92ea651c1650660796000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne5.cheyenne.ucar.eduuse longname for mct/cice5 tests 2022-04-22 14:53:16 -06008b6825d4dcd5e6f435bfb43b28b7393a92ea651cuse longname for mct/cice5 testseditcime_config/testdefs/testlist_cam.xmldoc/ChangeLogbee63bdff8a73cf9dfb5a627b50495336340c4c41650662092000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne5.cheyenne.ucar.eduinitial changelog updates 2022-04-22 15:14:52 -0600bee63bdff8a73cf9dfb5a627b50495336340c4c4initial changelog updateseditdoc/ChangeLogbld/namelist_files/namelist_definition.xmlbld/build-namelistbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/clubb_intr.F909ea6441846dd3812c2a675a61a5d48f9c8fa30db1650826987000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comUse CLUBB's own clubb_l_do_expldiff_rtm_thlm only to control diffusion on rtm and thlm; eliminate duplicate flags clubb_expldiff and do_expldiff. 2022-04-24 13:03:07 -06009ea6441846dd3812c2a675a61a5d48f9c8fa30dbUse CLUBB's own clubb_l_do_expldiff_rtm_thlm only to control diffusion on rtm and thlm; eliminate duplicate flags clubb_expldiff and do_expldiff.editbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/namelist_definition.xmleditbld/build-namelisteditsrc/physics/cam/clubb_intr.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/shell_commands7e53f5a8ec308052f93c29e72d5ff51714e212581650834089000http://carson.math.uwm.edu/jenkins/user/sunjiansunjiansunjian@ucar.eduUpdate xmlchange command with Steve's suggestions modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/shell_commands modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/shell_commands modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/shell_commands modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/shell_commands 2022-04-24 15:01:29 -06007e53f5a8ec308052f93c29e72d5ff51714e21258Update xmlchange command with Steve's suggestionseditcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_pcols1536/shell_commandseditcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_default/shell_commandseditcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_nondefault/shell_commandseditcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg2_default/shell_commandssrc/physics/cam/physpkg.F90src/physics/cam/physics_types.F90src/physics/cam/budgets.F90src/physics/cam/check_energy.F90e456289c60270a2c6c57782366a9d0cebfe1844d1650850815000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comupdates to the inline energy diagnostics including a new budgets module that handles the meta data involved in working with budgets similar to the way constituents are handled 2022-04-24 19:40:15 -0600e456289c60270a2c6c57782366a9d0cebfe1844dupdates to the inline energy diagnostics including a new budgets module that handles the meta data involved in working with budgets similar to the way constituents are handledaddsrc/physics/cam/budgets.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam/physics_types.F90doc/ChangeLogExternals.cfgc0280a557d1829b71cab3dcb0fc74e0707e9cf321650911406000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne1.cheyenne.ucar.eduupdate ccs_config external 2022-04-25 12:30:06 -0600c0280a557d1829b71cab3dcb0fc74e0707e9cf32update ccs_config externaleditdoc/ChangeLogeditExternals.cfgsrc/cpl/nuopc/atm_import_export.F9041b1f876f4dd171b35af0784ebbe48ab9db4d4321650989292000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduscam fixes 2022-04-26 10:08:12 -060041b1f876f4dd171b35af0784ebbe48ab9db4d432scam fixeseditsrc/cpl/nuopc/atm_import_export.F90Externals.cfgdoc/ChangeLogdb52a52d7c4c0c5ed27142f0d642b2b2748df8431651107732000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduupdate cice and ccs_config externals; add testing to changelog 2022-04-27 19:02:12 -0600db52a52d7c4c0c5ed27142f0d642b2b2748df843update cice and ccs_config externals; add testing to changelogeditExternals.cfgeditdoc/ChangeLogExternals.cfgsrc/cpl/nuopc/atm_import_export.F90650f83868add199661debcc7487e2fbf777daef71651120234000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.edufixes for SCT test 2022-04-27 22:30:34 -0600650f83868add199661debcc7487e2fbf777daef7fixes for SCT testeditsrc/cpl/nuopc/atm_import_export.F90editExternals.cfgExternals.cfga9aaf04846c21495788471eedb390abfd26ba0a91651121165000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduupdated ccs_config 2022-04-27 22:46:05 -0600a9aaf04846c21495788471eedb390abfd26ba0a9updated ccs_configeditExternals.cfgbld/namelist_files/namelist_definition.xmlbld/build-namelistsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xml765f1a7b3f275c1340a4fa8bfbf93a0681ee0a651651181160000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduCleaning up all of the namelist fields 2022-04-28 15:26:00 -0600765f1a7b3f275c1340a4fa8bfbf93a0681ee0a65Cleaning up all of the namelist fieldseditsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/namelist_definition.xmleditbld/build-namelistbld/namelist_files/namelist_defaults_cam.xml08e4c1fad7b7f265cd384349a4420a15f972f7eb1651182157000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.educlubb_e3sm should default to false 2022-04-28 15:42:37 -060008e4c1fad7b7f265cd384349a4420a15f972f7ebclubb_e3sm should default to falseeditbld/namelist_files/namelist_defaults_cam.xmlExternals.cfgdoc/ChangeLogcime_config/testdefs/testlist_cam.xml193682f8e25320bed0f74131f706589bc0839a231651264411000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduupdate externals; remove redundant mct tests 2022-04-29 14:33:31 -0600193682f8e25320bed0f74131f706589bc0839a23update externals; remove redundant mct testseditExternals.cfgeditdoc/ChangeLogeditcime_config/testdefs/testlist_cam.xmldoc/ChangeLogbld/Makefile.in320dc62abdfb3bcf653c92fe908ee378b46c17351651269654000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduupdate Makefile to point to new genf90 location 2022-04-29 16:00:54 -0600320dc62abdfb3bcf653c92fe908ee378b46c1735update Makefile to point to new genf90 locationeditdoc/ChangeLogeditbld/Makefile.insrc/physics/cam_dev/physpkg.F9001a24ad10016b58adc61204d1fff0a23c65d72081651275339000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.combugfix missing set_dry_to_wet call 2022-04-29 17:35:39 -060001a24ad10016b58adc61204d1fff0a23c65d7208bugfix missing set_dry_to_wet calleditsrc/physics/cam_dev/physpkg.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F90b22845adb35ee57601ac99b9072057462890ce001651287972000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFirst review changes 2022-04-29 21:06:12 -0600b22845adb35ee57601ac99b9072057462890ce00First review changeseditsrc/physics/cam_dev/micro_pumas_cam.F90editsrc/physics/cam/micro_pumas_cam.F90cime_config/SystemTests/sct.py750911e0ea3a95c55f89a5ac9a8c22c757ea8a141651509959000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.edufix typo in sct.py which accidentally introduced 2022-05-02 10:45:59 -0600750911e0ea3a95c55f89a5ac9a8c22c757ea8a14fix typo in sct.py which accidentally introducededitcime_config/SystemTests/sct.pybld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xml198c74abaf8d926b73f0c54a67cf85296d589e1b1651524974000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChanges to address review comments 2022-05-02 14:56:14 -0600198c74abaf8d926b73f0c54a67cf85296d589e1bChanges to address review commentseditsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_definition.xmleditbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam_dev/physpkg.F90src/dynamics/se/dycore/fvm_mapping.F90bld/build-namelistsrc/dynamics/mpas/driver/cam_mpas_subdriver.F90src/dynamics/se/dycore/dimensions_mod.F90src/dynamics/se/dycore/global_norms_mod.F90src/physics/cam/zm_conv.F90src/dynamics/mpas/Makefilesrc/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/se/dycore/viscosity_mod.F90src/dynamics/se/dycore/prim_driver_mod.F90src/dynamics/se/dyn_comp.F90bld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_definition.xmlExternals_CAM.cfgsrc/dynamics/se/dycore/element_mod.F90b0c0b16cb60142e4dbc6cdb4969e4c24321801fc1651561665000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduupdates for misc tag includes #530 #543 #551 #506 2022-05-03 01:07:45 -0600b0c0b16cb60142e4dbc6cdb4969e4c24321801fcupdates for misc tag includes #530 #543 #551 #506editsrc/physics/cam/zm_conv.F90editsrc/dynamics/se/dycore/prim_driver_mod.F90editbld/namelist_files/namelist_defaults_cam.xmleditsrc/dynamics/se/dycore/element_mod.F90editsrc/dynamics/se/dycore/viscosity_mod.F90editsrc/physics/cam_dev/physpkg.F90editsrc/dynamics/se/dycore/global_norms_mod.F90editsrc/dynamics/se/dycore/fvm_mapping.F90editExternals_CAM.cfgeditbld/namelist_files/namelist_definition.xmleditsrc/dynamics/mpas/Makefileeditsrc/dynamics/se/dyn_comp.F90editbld/build-namelisteditsrc/dynamics/mpas/driver/cam_mpas_subdriver.F90editsrc/dynamics/se/dycore/dimensions_mod.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90doc/ChangeLog4ae843418746cc4fec468fd48186815de512b7db1651597456000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comupdate ChangeLog for PR 2022-05-03 11:04:16 -06004ae843418746cc4fec468fd48186815de512b7dbupdate ChangeLog for PReditdoc/ChangeLogsrc/physics/cam/micro_pumas_cam.F907aa9330891a9b9f4148bad78f18174b43ab5631e1651763458000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduLimit arrays to PUMAS to levels which are being used 2022-05-05 09:10:58 -06007aa9330891a9b9f4148bad78f18174b43ab5631eLimit arrays to PUMAS to levels which are being usededitsrc/physics/cam/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F9058d43ba5961515cb6673e9608ff03ede487d7a121651769107000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduInitialize PUMAS output variables from above top_lev to top of atmosphere 2022-05-05 10:45:07 -060058d43ba5961515cb6673e9608ff03ede487d7a12Initialize PUMAS output variables from above top_lev to top of atmosphereeditsrc/physics/cam/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90df56c3da2733e0461dfad3e2418b2827b3392d971651780124000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove extra copy of tendency variables 2022-05-05 13:48:44 -0600df56c3da2733e0461dfad3e2418b2827b3392d97Remove extra copy of tendency variableseditsrc/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F9018da70ad87c2a4f146ddf2363c5c8e4b0f2763c31651786475000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd same fixes to cam_dev version of micro_pumas_cam.F90 2022-05-05 15:34:35 -060018da70ad87c2a4f146ddf2363c5c8e4b0f2763c3Add same fixes to cam_dev version of micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F907de7fd27baaaafdf9bb3964bbb1c858eddb2d5f41651788048000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd missing comma 2022-05-05 16:00:48 -06007de7fd27baaaafdf9bb3964bbb1c858eddb2d5f4Add missing commaeditsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F900d8587f60d21967f01981c7ddc5d877fc0261c991651791062000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduA few more minor tweeks 2022-05-05 16:51:02 -06000d8587f60d21967f01981c7ddc5d877fc0261c99A few more minor tweekseditsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90src/dynamics/se/dycore/prim_state_mod.F90src/dynamics/se/dycore/fvm_mod.F90src/dynamics/se/dycore/fvm_mapping.F90src/utils/cam_thermo.F90src/utils/air_composition.F90src/dynamics/se/dycore/prim_advection_mod.F90src/utils/physconst.F906ca23fd985e10acd2eee3c1f05d02ce1a18598431651857523000http://carson.math.uwm.edu/jenkins/user/goldygoldygoldy@ucar.eduNew module, air_composition to control and initialize atmosphere composition Starting to work on cam_thermo module for consistent model thermodynamics Moved some code from physconst to air_composition Moving some code from physconst to cam_thermo 2022-05-06 11:18:43 -06006ca23fd985e10acd2eee3c1f05d02ce1a1859843New module, air_composition to control andaddsrc/utils/air_composition.F90editsrc/dynamics/se/dycore/prim_state_mod.F90editsrc/utils/physconst.F90editsrc/dynamics/se/dycore/fvm_mod.F90editsrc/dynamics/se/dycore/fvm_mapping.F90addsrc/utils/cam_thermo.F90editsrc/dynamics/se/dycore/prim_advection_mod.F90src/physics/cam/physpkg.F90bld/namelist_files/namelist_defaults_cam.xmlb4496d6339b849b13627856c3728736d1a5169621651865750000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChanges for the izumi nag tests 2022-05-06 13:35:50 -0600b4496d6339b849b13627856c3728736d1a516962Changes for the izumi nag testseditbld/namelist_files/namelist_defaults_cam.xmleditsrc/physics/cam/physpkg.F90bld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F90f3bcd7489bf12dbef8abfca98b44a61ce33b78381651871265000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChanges to address peverwhee review 2022-05-06 15:07:45 -0600f3bcd7489bf12dbef8abfca98b44a61ce33b7838Changes to address peverwhee revieweditbld/namelist_files/namelist_definition.xmleditsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_definition.xmlbb5c1145cedf7664996259e024a47660cb59c8b71651871698000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.edubld/namelist_files/namelist_definition.xml 2022-05-06 15:14:58 -0600bb5c1145cedf7664996259e024a47660cb59c8b7bld/namelist_files/namelist_definition.xmleditbld/namelist_files/namelist_definition.xmlExternals.cfgsrc/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F90e376a06f29e3d54c007c4934a8c663db4a324ccb1651877586000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMinor updates and update CICE6 external 2022-05-06 16:53:06 -0600e376a06f29e3d54c007c4934a8c663db4a324ccbMinor updates and update CICE6 externaleditExternals.cfgeditsrc/physics/cam_dev/micro_pumas_cam.F90editsrc/physics/cam/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F9037751b910cf8885406e66efe6fb6f1a52b7b8f851651877736000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMinor code reorganization 2022-05-06 16:55:36 -060037751b910cf8885406e66efe6fb6f1a52b7b8f85Minor code reorganizationeditsrc/physics/cam_dev/micro_pumas_cam.F90editsrc/physics/cam/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F90f3f09e081d93ff3d8a7eded1bd087d8c8d35a76d1651902435000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress final reviewer's comments 2022-05-06 23:47:15 -0600f3f09e081d93ff3d8a7eded1bd087d8c8d35a76dAddress final reviewer's commentseditsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F90a4c0823d166aa1a9e652566bb712ae78fd8244ae1651904897000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove initializations which were not needed and did not work 2022-05-07 00:28:17 -0600a4c0823d166aa1a9e652566bb712ae78fd8244aeRemove initializations which were not needed and did not workeditsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90src/ionosphere/waccmx/ltr_module.F90c1e73c7485bd2ae6759bea8a57eb12dc7a0b84341651934660000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove grid size assumption of input data modified: src/ionosphere/waccmx/ltr_module.F90 2022-05-07 08:44:20 -0600c1e73c7485bd2ae6759bea8a57eb12dc7a0b8434remove grid size assumption of input dataeditsrc/ionosphere/waccmx/ltr_module.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F903c75974e97224309c749be72b2a07b18cebd1f041651940825000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduPut back in array of NaNs 2022-05-07 10:27:05 -06003c75974e97224309c749be72b2a07b18cebd1f04Put back in array of NaNseditsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90doc/ChangeLoge8aaddfd920f58793cc448fea7a8d9cb9db416161652036690000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduChangeLog update for cam6_3_057 2022-05-08 13:04:50 -0600e8aaddfd920f58793cc448fea7a8d9cb9db41616ChangeLog update for cam6_3_057editdoc/ChangeLogsrc/ionosphere/waccmx/ltr_module.F90a2625b0be51073864a5aa2b9bf08658646ada1511652085663000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edureplace lonmx and jmxm with lonp1 and latp1, respectively modified: src/ionosphere/waccmx/ltr_module.F90 2022-05-09 02:41:03 -0600a2625b0be51073864a5aa2b9bf08658646ada151replace lonmx and jmxm with lonp1 and latp1, respectivelyeditsrc/ionosphere/waccmx/ltr_module.F90src/physics/simple/frierson.F90src/physics/simple/frierson_cam.F900b2c685ff07dbda0120a91bf4006db21cbdf98661652124283000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMake a few changes as indicated by patc 2022-05-09 13:24:43 -06000b2c685ff07dbda0120a91bf4006db21cbdf9866Make a few changes as indicated by patceditsrc/physics/simple/frierson_cam.F90editsrc/physics/simple/frierson.F90src/dynamics/fv/te_map.F90src/physics/cam_dev/physpkg.F90src/chemistry/mozart/charge_neutrality.F90src/utils/air_composition.F90src/dynamics/se/stepon.F90src/physics/cam/clubb_intr.F90src/dynamics/fv/dyn_comp.F90src/dynamics/se/dyn_grid.F90src/dynamics/se/dycore/prim_advection_mod.F90src/chemistry/mozart/mee_ionization.F90src/chemistry/mozart/mo_waccm_hrates.F90src/physics/waccmx/majorsp_diffusion.F90src/dynamics/fv3/dp_coupling.F90src/physics/simple/held_suarez_cam.F90src/dynamics/fv/dp_coupling.F90src/dynamics/se/dyn_comp.F90src/utils/cam_thermo.F90src/physics/waccm/nlte_lw.F90src/physics/cam/diffusion_solver.F90src/physics/cam/dadadj_cam.F90src/physics/waccm/iondrag.F90src/physics/cam/vertical_diffusion.F90src/physics/waccmx/ion_electron_temp.F90src/dynamics/fv3/dyn_comp.F90src/physics/cam/physpkg.F90src/physics/cam/molec_diff.F90src/physics/waccm/radheat.F90src/physics/simple/physpkg.F90src/physics/cam/eddy_diff_cam.F90src/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/fv/stepon.F90src/dynamics/mpas/dp_coupling.F90src/physics/cam/gw_drag.F90src/control/cam_comp.F90src/dynamics/se/dp_coupling.F90src/physics/waccmx/steady_state_tei.F90src/physics/cam/check_energy.F90src/chemistry/mozart/upper_bc.F90src/physics/cam/cam_diagnostics.F90src/dynamics/se/gravity_waves_sources.F90src/chemistry/mozart/epp_ionization.F90src/dynamics/mpas/dyn_comp.F90src/physics/cam/physics_types.F90f3186eecd974bce5e206d088361e1e75b1eed62d1652133655000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.edufinish thermo refactor; now builds but doesn't run 2022-05-09 16:00:55 -0600f3186eecd974bce5e206d088361e1e75b1eed62dfinish thermo refactor; now builds but doesn't runeditsrc/physics/waccm/radheat.F90editsrc/physics/simple/held_suarez_cam.F90editsrc/utils/air_composition.F90editsrc/physics/cam/eddy_diff_cam.F90editsrc/chemistry/mozart/mee_ionization.F90editsrc/chemistry/mozart/mo_waccm_hrates.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/dynamics/se/dyn_comp.F90editsrc/physics/cam/clubb_intr.F90editsrc/chemistry/mozart/charge_neutrality.F90editsrc/physics/waccm/nlte_lw.F90editsrc/chemistry/mozart/upper_bc.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam/vertical_diffusion.F90editsrc/dynamics/fv/dyn_comp.F90editsrc/physics/cam/gw_drag.F90editsrc/physics/waccmx/majorsp_diffusion.F90editsrc/dynamics/se/dp_coupling.F90editsrc/physics/cam/molec_diff.F90editsrc/physics/cam/physics_types.F90editsrc/dynamics/fv/stepon.F90editsrc/dynamics/fv3/dyn_comp.F90editsrc/dynamics/fv/te_map.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/physics/waccm/iondrag.F90editsrc/physics/simple/physpkg.F90editsrc/physics/cam/physpkg.F90editsrc/dynamics/se/dycore/prim_advection_mod.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/physics/cam/dadadj_cam.F90editsrc/dynamics/se/gravity_waves_sources.F90editsrc/physics/waccmx/ion_electron_temp.F90editsrc/physics/waccmx/steady_state_tei.F90editsrc/dynamics/fv/dp_coupling.F90editsrc/chemistry/mozart/epp_ionization.F90editsrc/dynamics/fv3/dp_coupling.F90editsrc/control/cam_comp.F90editsrc/dynamics/se/stepon.F90editsrc/physics/cam/diffusion_solver.F90editsrc/physics/cam_dev/physpkg.F90editsrc/dynamics/se/dyn_grid.F90editsrc/utils/cam_thermo.F90src/physics/cam/ndrop.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F909d9271ee0221401148d1ef56e146f7e2e4f5ea261652202148000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduImprove some documentation and other changes to appease reviewers modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/physics/cam/ndrop.F90 Note: roundoff differences introduced in CCN diagnostics 2022-05-10 11:02:28 -06009d9271ee0221401148d1ef56e146f7e2e4f5ea26Improve some documentation and other changes to appease reviewerseditsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/physics/cam/ndrop.F90src/control/runtime_opts.F90src/dynamics/fv/dyn_comp.F90src/dynamics/fv/te_map.F90src/dynamics/se/dyn_comp.F90src/utils/cam_thermo.F90392ccc45d9f0c28e10e2a520e340df37ecbcc6611652231106000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduadd call to air_composition_readnl 2022-05-10 19:05:06 -0600392ccc45d9f0c28e10e2a520e340df37ecbcc661add call to air_composition_readnleditsrc/control/runtime_opts.F90editsrc/dynamics/se/dyn_comp.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/fv/dyn_comp.F90editsrc/dynamics/fv/te_map.F90src/physics/waccmx/majorsp_diffusion.F902d1559082eb0e74a18ee141ddd69edee60ed49ca1652231587000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.edufix typo 2022-05-10 19:13:07 -06002d1559082eb0e74a18ee141ddd69edee60ed49cafix typoeditsrc/physics/waccmx/majorsp_diffusion.F90doc/ChangeLogsrc/dynamics/se/dycore/prim_driver_mod.F90476195843ad4078e1ecc35cb66ed495e2258e6711652293013000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduremove PASSed tests and add doi reference 2022-05-11 12:16:53 -0600476195843ad4078e1ecc35cb66ed495e2258e671remove PASSed tests and add doi referenceeditdoc/ChangeLogeditsrc/dynamics/se/dycore/prim_driver_mod.F90bld/namelist_files/namelist_definition.xmlbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/subcol_SILHS.F907dda7514cb0969cc9ab9ba4778e86c945c672c8c1652300230000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChanging silhs namelist options to include subcol_silhs in the name 2022-05-11 14:17:10 -06007dda7514cb0969cc9ab9ba4778e86c945c672c8cChanging silhs namelist options to include subcol_silhs in the nameeditsrc/physics/cam/subcol_SILHS.F90editbld/namelist_files/namelist_definition.xmleditbld/namelist_files/namelist_defaults_cam.xmlsrc/utils/cam_thermo.F90src/dynamics/eul/dp_coupling.F90src/utils/air_composition.F90src/dynamics/se/dycore/prim_advance_mod.F90ba0532d08a46d7a0f2040a1a58fcc93d24a7661d1652307653000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.edufix dimensions in cam_thermo, fix a couple of calls; change "N2" to "N" 2022-05-11 16:20:53 -0600ba0532d08a46d7a0f2040a1a58fcc93d24a7661dfix dimensions in cam_thermo, fix a couple of calls; change "N2" to "N"editsrc/utils/air_composition.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/eul/dp_coupling.F90src/physics/cam/micro_pumas_cam.F90Externals_CAM.cfgd9d33276cbf750b8707ffa43d1f371790541f1cd1652309249000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.edurough prototype for DDT 2022-05-11 16:47:29 -0600d9d33276cbf750b8707ffa43d1f371790541f1cdrough prototype for DDTeditsrc/physics/cam/micro_pumas_cam.F90editExternals_CAM.cfgsrc/utils/cam_thermo.F90b14a4414ba5b6bc3cae5b93564ab5c25fafb9df31652327190000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.edufix dimensions in cam_thermo 2022-05-11 21:46:30 -0600b14a4414ba5b6bc3cae5b93564ab5c25fafb9df3fix dimensions in cam_thermoeditsrc/utils/cam_thermo.F90src/chemistry/utils/input_data_utils.F90src/ionosphere/waccmx/amie_module.F900977e2077ddda495e174f7c1b2a5f2df143bf0521652387778000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse time_coordinate utility modified: src/chemistry/utils/input_data_utils.F90 modified: src/ionosphere/waccmx/amie_module.F90 2022-05-12 14:36:18 -06000977e2077ddda495e174f7c1b2a5f2df143bf052use time_coordinate utilityeditsrc/ionosphere/waccmx/amie_module.F90editsrc/chemistry/utils/input_data_utils.F90bld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F902081bc4be1a8a75c01678a6ce1bd3e23b4b8162a1652394405000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduResponses to Jesse s review 2022-05-12 16:26:45 -06002081bc4be1a8a75c01678a6ce1bd3e23b4b8162aResponses to Jesse s revieweditsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_definition.xmlsrc/physics/cam_dev/physpkg.F90adb65a096e130b2248738b147a5edc6c7390ad911652395991000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduMoving update from regular physpkg to cam_dev physpkg 2022-05-12 16:53:11 -0600adb65a096e130b2248738b147a5edc6c7390ad91Moving update from regular physpkg to cam_dev physpkgeditsrc/physics/cam_dev/physpkg.F90src/physics/waccm/nlte_aliarms.F90src/physics/cam/restart_physics.F90src/physics/waccm/nlte_lw.F909dd01aca849f69d49af461fee4477479659937c11652397417000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress some review comments 2022-05-12 17:16:57 -06009dd01aca849f69d49af461fee4477479659937c1Address some review commentseditsrc/physics/waccm/nlte_aliarms.F90editsrc/physics/cam/restart_physics.F90editsrc/physics/waccm/nlte_lw.F90doc/ChangeLogsrc/dynamics/se/dyn_comp.F9068fa341dbba6b0aabfadb720b16f5932d9b623ed1652419039000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduPR review updates 2022-05-12 23:17:19 -060068fa341dbba6b0aabfadb720b16f5932d9b623edPR review updateseditdoc/ChangeLogeditsrc/dynamics/se/dyn_comp.F90src/physics/cam_dev/physpkg.F905b96ef192546370e6fa7ca58b7db2d77feedd6f31652458807000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduAdd call to microp_aero_final in cam_dev/physpkg modified: src/physics/cam_dev/physpkg.F90 2022-05-13 10:20:07 -06005b96ef192546370e6fa7ca58b7db2d77feedd6f3Add call to microp_aero_final in cam_dev/physpkgeditsrc/physics/cam_dev/physpkg.F90src/physics/waccm/nlte_aliarms.F90f4314691cce735ab417020b6699ad1d8cc3f50ae1652461028000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduCalculate pver_c using pref_mid during init 2022-05-13 10:57:08 -0600f4314691cce735ab417020b6699ad1d8cc3f50aeCalculate pver_c using pref_mid during initeditsrc/physics/waccm/nlte_aliarms.F90Externals.cfgsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam/nucleate_ice.F90doc/ChangeLogsrc/physics/cam/micro_pumas_cam.F90cime_config/SystemTests/sct.py164745681455a22b57f0694f8d28b7959b3035bd1652470828000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.educam6_3_057 updates 2022-05-13 13:40:28 -0600164745681455a22b57f0694f8d28b7959b3035bdcam6_3_057 updateseditdoc/ChangeLogeditExternals.cfgeditcime_config/SystemTests/sct.pyeditsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam_dev/micro_pumas_cam.F90editsrc/physics/cam/nucleate_ice.F90doc/ChangeLogc39e799775b075252ded5dbbe9599cc11b6cc2031652473125000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduupdate Changelog for PR 2022-05-13 14:18:45 -0600c39e799775b075252ded5dbbe9599cc11b6cc203update Changelog for PReditdoc/ChangeLogsrc/physics/cam/subcol_SILHS.F90cee5d64a792cd85d5dbca47f7eb4edec5319a6161652475002000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduLast of Jesses review suggestions 2022-05-13 14:50:02 -0600cee5d64a792cd85d5dbca47f7eb4edec5319a616Last of Jesses review suggestionseditsrc/physics/cam/subcol_SILHS.F90src/physics/waccm/radheat.F90src/physics/waccm/nlte_lw.F90e4d81050a3e29058f9842a28562ac7f6718fb5971652719321000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdditional cleanup 2022-05-16 10:42:01 -0600e4d81050a3e29058f9842a28562ac7f6718fb597Additional cleanupeditsrc/physics/waccm/radheat.F90editsrc/physics/waccm/nlte_lw.F90cime_config/testdefs/testmods_dirs/cam/silhs/user_nl_camsrc/physics/cam/clubb_intr.F900ba56d97ea81cef40f52e4c39e6229bb690ac8651652734007000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduOne review fix and fixing clubb mf test errors 2022-05-16 14:46:47 -06000ba56d97ea81cef40f52e4c39e6229bb690ac865One review fix and fixing clubb mf test errorseditsrc/physics/cam/clubb_intr.F90editcime_config/testdefs/testmods_dirs/cam/silhs/user_nl_camsrc/physics/cam/clubb_intr.F902de44c7dbf9adcba109a790a5ae11b47e71d6aa51652994898000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduHad to roll back these changes to get everything working correctly 2022-05-19 15:14:58 -06002de44c7dbf9adcba109a790a5ae11b47e71d6aa5Had to roll back these changes to get everything working correctlyeditsrc/physics/cam/clubb_intr.F90src/ionosphere/waccmx/ltr_module.F90src/ionosphere/waccmx/amie_module.F90a19f4f618931c176d72bd751da314f9c02fa97021653001706000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse time_coord in LTR reader; AMIE corrections to timing weights modified: src/ionosphere/waccmx/amie_module.F90 modified: src/ionosphere/waccmx/ltr_module.F90 2022-05-19 17:08:26 -0600a19f4f618931c176d72bd751da314f9c02fa9702use time_coord in LTR reader; AMIE corrections to timing weightseditsrc/ionosphere/waccmx/ltr_module.F90editsrc/ionosphere/waccmx/amie_module.F90cime_config/testdefs/testmods_dirs/cam/silhs/user_nl_cam42da6a4fe698f821b0cf974b07e790bc647eabbd1653019153000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduRemoved wp2_pr_dfsn output field because it caused buildnamelist to hang 2022-05-19 21:59:13 -060042da6a4fe698f821b0cf974b07e790bc647eabbdRemoved wp2_pr_dfsn output field because it caused buildnamelist to hangeditcime_config/testdefs/testmods_dirs/cam/silhs/user_nl_camcime_config/testdefs/testlist_cam.xmlsrc/physics/cam/clubb_intr.F90ac34b78515152481cea532ca01195c003c9e703f1653062424000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdates for MPAS test and un-re-roll-back for clubb-mf tests 2022-05-20 10:00:24 -0600ac34b78515152481cea532ca01195c003c9e703fUpdates for MPAS test and un-re-roll-back for clubb-mf testseditsrc/physics/cam/clubb_intr.F90editcime_config/testdefs/testlist_cam.xmldoc/ChangeLogf1432655aeec65616220696926397e1ae208ae101653083960000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog entry 2022-05-20 15:59:20 -0600f1432655aeec65616220696926397e1ae208ae10ChangeLog entryeditdoc/ChangeLogsrc/physics/cam/micro_pumas_cam.F9093e04fdd908f2160da79eb82497aac7f79fe2c7f1653087417000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAndrew original mods 2022-05-20 16:56:57 -060093e04fdd908f2160da79eb82497aac7f79fe2c7fAndrew original modseditsrc/physics/cam/micro_pumas_cam.F90doc/ChangeLog17d5c234a8ce0f5039b8438569c59ad3f881274a1653089941000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChangeLog entry for cam6_3_059 2022-05-20 17:39:01 -060017d5c234a8ce0f5039b8438569c59ad3f881274aChangeLog entry for cam6_3_059editdoc/ChangeLogsrc/physics/cam/micro_pumas_cam.F909e5c4888e2091e5c2929788a629e1b4cd5a48a491653342985000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMinor updates 2022-05-23 15:56:25 -06009e5c4888e2091e5c2929788a629e1b4cd5a48a49Minor updateseditsrc/physics/cam/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F90605306d460b63b8e3ba61da8602a13031471f76c1653346552000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduPut micro_pumas_cam.F90 changes in appropriate directory 2022-05-23 16:55:52 -0600605306d460b63b8e3ba61da8602a13031471f76cPut micro_pumas_cam.F90 changes in appropriate directoryeditsrc/physics/cam_dev/micro_pumas_cam.F90editsrc/physics/cam/micro_pumas_cam.F90doc/ChangeLogaac8022850453b22ae2f8017db137b633498702d1653349903000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog entries 2022-05-23 17:51:43 -0600aac8022850453b22ae2f8017db137b633498702dChangeLog entrieseditdoc/ChangeLogdoc/ChangeLogc8d6f50952092025c9f9879f7458129675dc10ef1653393498000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2022-05-24 05:58:18 -0600c8d6f50952092025c9f9879f7458129675dc10efChangeLog updateseditdoc/ChangeLogExternals_CAM.cfg96c6dd3fa7bd8e00c5950937c2488de73e4743421653406729000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate PUMAS external to bring in required changes 2022-05-24 09:38:49 -060096c6dd3fa7bd8e00c5950937c2488de73e474342Update PUMAS external to bring in required changeseditExternals_CAM.cfgsrc/physics/cam/clubb_intr.F90b9ed6e73dd8c6a697027eee023aca912697453781653429721000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comscale sensible heat fluxes by exner 2022-05-24 16:02:01 -0600b9ed6e73dd8c6a697027eee023aca91269745378scale sensible heat fluxes by exnereditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F9016f39a88e7b96dad3d0f51830dd29f1aca5aa56b1653431780000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comdry base state fixes, omega fixes, removed rho_in (redundant) 2022-05-24 16:36:20 -060016f39a88e7b96dad3d0f51830dd29f1aca5aa56bdry base state fixes, omega fixes, removed rho_in (redundant)editsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/mo_neu_wetdep.F90bld/build-namelistbld/namelist_files/namelist_defaults_cam.xml2d37401fac62579447d6a87030105756ebc0cc951653432133000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduread Henry's law coeff, etc., from file modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml modified: src/chemistry/mozart/mo_neu_wetdep.F90 2022-05-24 16:42:13 -06002d37401fac62579447d6a87030105756ebc0cc95read Henry's law coeff, etc., from fileeditbld/namelist_files/namelist_definition.xmleditsrc/chemistry/mozart/mo_neu_wetdep.F90editbld/build-namelisteditbld/namelist_files/namelist_defaults_cam.xmlsrc/cpl/mct/cam_cpl_indices.F907e39c73f2dea328c0ba3a9727fac3c894bc2edc71653432133000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse the new shr_drydep_mod module modified: src/cpl/mct/cam_cpl_indices.F90 2022-05-24 16:42:13 -06007e39c73f2dea328c0ba3a9727fac3c894bc2edc7use the new shr_drydep_mod moduleeditsrc/cpl/mct/cam_cpl_indices.F90src/chemistry/mozart/mo_chemini.F90src/control/camsrfexch.F90src/chemistry/mozart/mo_drydep.F90src/chemistry/mozart/mo_neu_wetdep.F90src/cpl/mct/atm_import_export.F90e46c67d66129410ca6e169e647f28b9fe2bf75fe1653432757000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore changes to use shr_drydep_mod module modified: Externals.cfg modified: src/chemistry/mozart/mo_chemini.F90 modified: src/chemistry/mozart/mo_drydep.F90 modified: src/chemistry/mozart/mo_neu_wetdep.F90 modified: src/control/camsrfexch.F90 modified: src/cpl/mct/atm_import_export.F90 2022-05-24 16:52:37 -0600e46c67d66129410ca6e169e647f28b9fe2bf75femore changes to use shr_drydep_mod moduleeditsrc/chemistry/mozart/mo_chemini.F90editsrc/chemistry/mozart/mo_neu_wetdep.F90editsrc/control/camsrfexch.F90editsrc/cpl/mct/atm_import_export.F90editsrc/chemistry/mozart/mo_drydep.F90src/physics/cam_dev/physpkg.F90src/physics/cam/cam_diagnostics.F90src/physics/cam/physpkg.F90src/physics/cam/clubb_intr.F90src/physics/cam/check_energy.F906fd106aac843b6768ce8dff1e1a79c93eb6a68811653439159000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadded dqcore, ivt and clubb energy diagnostics 2022-05-24 18:39:19 -06006fd106aac843b6768ce8dff1e1a79c93eb6a6881added dqcore, ivt and clubb energy diagnosticseditsrc/physics/cam/physpkg.F90editsrc/physics/cam/clubb_intr.F90editsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam/cam_diagnostics.F90src/physics/cam/physpkg.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam/clubb_intr.F90src/physics/rrtmg/radiation.F902879815f899137c82e51dd6a97f11e35f188f2051653444711000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadded time-step info to the log 2022-05-24 20:11:51 -06002879815f899137c82e51dd6a97f11e35f188f205added time-step info to the logeditsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/cam/clubb_intr.F90editsrc/physics/rrtmg/radiation.F90editsrc/physics/cam/physpkg.F90Externals.cfg94b75ae1dd7b5b94eef4d7e5276ae1b56deab2aa1653445164000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse external branches 2022-05-24 20:19:24 -060094b75ae1dd7b5b94eef4d7e5276ae1b56deab2aause external brancheseditExternals.cfgsrc/physics/carma/models/test_growth/carma_model_mod.F900a5589d81b5e597b0d327be30cb1e52ddf077a851653498751000http://carson.math.uwm.edu/jenkins/user/mlandermlandermlander@ucar.eduCommitting changes prior to testing for tag 2022-05-25 11:12:31 -06000a5589d81b5e597b0d327be30cb1e52ddf077a85Committing changes prior to testing for tageditsrc/physics/carma/models/test_growth/carma_model_mod.F90src/physics/cam/clubb_intr.F90d3d75e8d6b9d8a210669acaebafcd4672e9a3cb91653499702000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.combug fixes to th, thv and rho, after clubb state update 2022-05-25 11:28:22 -0600d3d75e8d6b9d8a210669acaebafcd4672e9a3cb9bug fixes to th, thv and rho, after clubb state updateeditsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xmlea76bb148aa040c487b0e10661eae7a25c7c97ae1653515702000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate namelist settings 2022-05-25 15:55:02 -0600ea76bb148aa040c487b0e10661eae7a25c7c97aeUpdate namelist settingseditbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/clubb_intr.F905320ed46ccd6e6f880a03d565662df8e4d5e6ad51653517379000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comfixed outfld for midpoint fields, change all units of g to kg, remove redundant outflds 2022-05-25 16:22:59 -06005320ed46ccd6e6f880a03d565662df8e4d5e6ad5fixed outfld for midpoint fields, change all units of g to kg, remove redundant outfldseditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90fbff52fff66656fb4df701985a5a6e49a4730df61653518235000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comquick typo fix 2022-05-25 16:37:15 -0600fbff52fff66656fb4df701985a5a6e49a4730df6quick typo fixeditsrc/physics/cam/clubb_intr.F90src/physics/waccm/nlte_aliarms.F90src/physics/cam/radheat.F90src/physics/cam_dev/physpkg.F90src/physics/waccm/radheat.F90src/physics/cam/physpkg.F90src/physics/waccm/nlte_lw.F90fd8619c56e5f680035a8239bdef085f35ce384a41653577233000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress more reviewer's comments 2022-05-26 09:00:33 -0600fd8619c56e5f680035a8239bdef085f35ce384a4Address more reviewer's commentseditsrc/physics/waccm/nlte_lw.F90editsrc/physics/cam_dev/physpkg.F90editsrc/physics/waccm/radheat.F90editsrc/physics/waccm/nlte_aliarms.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam/radheat.F90doc/ChangeLog1416cb82ce7149a529c3595c2c68cf1a5234b1411653578423000http://carson.math.uwm.edu/jenkins/user/mlandermlandermlander@ucar.eduCommitting ChangeLog for new CAM tag 2022-05-26 09:20:23 -06001416cb82ce7149a529c3595c2c68cf1a5234b141Committing ChangeLog for new CAM tageditdoc/ChangeLogsrc/physics/cam_dev/physpkg.F90src/physics/cam/physpkg.F90src/physics/cam/clubb_intr.F90src/physics/cam/check_energy.F900d5e1d9597a784001570b363e76ea1cc2f6c5cf41653578794000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comaddress bens comments 2022-05-26 09:26:34 -06000d5e1d9597a784001570b363e76ea1cc2f6c5cf4address bens commentseditsrc/physics/cam/physpkg.F90editsrc/physics/cam/clubb_intr.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam_dev/physpkg.F90cime_config/testdefs/testlist_cam.xmlc36c164cff9b5f6bceb1bbfb7c1d0487051907aa1653598831000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduRemoved old mg3 test and added two F2000dev tests with one mg3 2022-05-26 15:00:31 -0600c36c164cff9b5f6bceb1bbfb7c1d0487051907aaRemoved old mg3 test and added two F2000dev tests with one mg3editcime_config/testdefs/testlist_cam.xmlsrc/dynamics/fv/metdata.F902005918d3f3abcf9555ee236155ee41d017ac8481653604312000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhanges to appease github reviewers modified: src/dynamics/fv/metdata.F90 2022-05-26 16:31:52 -06002005918d3f3abcf9555ee236155ee41d017ac848changes to appease github reviewerseditsrc/dynamics/fv/metdata.F90Externals_CAM.cfgsrc/physics/cam_dev/micro_pumas_cam.F90fb209023655c30b2eb924648c1b03f4c4e5eb9491653692586000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd additional diagnostics 2022-05-27 17:03:06 -0600fb209023655c30b2eb924648c1b03f4c4e5eb949Add additional diagnosticseditsrc/physics/cam_dev/micro_pumas_cam.F90editExternals_CAM.cfgsrc/cpl/nuopc/atm_import_export.F90src/cpl/nuopc/atm_comp_nuopc.F9041f8b162e561cb7c53e5b473269f5d89e51e18c51654002217000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduSeparate namelist reads from advertise fields (PORT fix) modified: src/cpl/nuopc/atm_comp_nuopc.F90 modified: src/cpl/nuopc/atm_import_export.F90 2022-05-31 07:03:37 -060041f8b162e561cb7c53e5b473269f5d89e51e18c5Separate namelist reads from advertise fields (PORT fix)editsrc/cpl/nuopc/atm_import_export.F90editsrc/cpl/nuopc/atm_comp_nuopc.F90doc/ChangeLog79a06e9b6413cb2f30ab83ef1926390bfd82658d1654005433000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog entry 2022-05-31 07:57:13 -060079a06e9b6413cb2f30ab83ef1926390bfd82658dChangeLog entryeditdoc/ChangeLogExternals_CAM.cfgsrc/physics/cam_dev/micro_pumas_cam.F9057a32aac98f22b94611439fc28a23074c82fc53d1654203589000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate PUMAS external 2022-06-02 14:59:49 -060057a32aac98f22b94611439fc28a23074c82fc53dUpdate PUMAS externaleditExternals_CAM.cfgeditsrc/physics/cam_dev/micro_pumas_cam.F90cime_config/testdefs/testlist_cam.xml17082a89cbb77770244a7cf1c622a27e26cbf6fa1654537392000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove prebeta test as already has a prealpha test run 2022-06-06 11:43:12 -060017082a89cbb77770244a7cf1c622a27e26cbf6faRemove prebeta test as already has a prealpha test runeditcime_config/testdefs/testlist_cam.xmldoc/ChangeLoge3866388d63b86327ddddf53dbb9fe62e5f8f3011654539649000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_063 2022-06-06 12:20:49 -0600e3866388d63b86327ddddf53dbb9fe62e5f8f301Update ChangeLog for cam6_3_063editdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/clubb_intr.F908a463e6c54e19b7f3f2b53b2f033f9d9585cb08d1654613699000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.commove pdf closure to post position, initialize rcm to CLDLIQ 2022-06-07 08:54:59 -06008a463e6c54e19b7f3f2b53b2f033f9d9585cb08dmove pdf closure to post position, initialize rcm to CLDLIQeditbld/namelist_files/namelist_defaults_cam.xmleditsrc/physics/cam/clubb_intr.F90src/chemistry/utils/input_data_utils.F907654a88174e06e2259bd8da0ababa9d792ddde291654641913000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurefine error checking of reading time/date variables modified: src/chemistry/utils/input_data_utils.F90 2022-06-07 16:45:13 -06007654a88174e06e2259bd8da0ababa9d792ddde29refine error checking of reading time/date variableseditsrc/chemistry/utils/input_data_utils.F90bld/namelist_files/namelist_defaults_cam.xml39220e89543f22da191d488d7290cae3113ac5ed1654735756000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comremoved clubb_timestep namelist defaults for hi-res grids 2022-06-08 18:49:16 -060039220e89543f22da191d488d7290cae3113ac5edremoved clubb_timestep namelist defaults for hi-res gridseditbld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/utils/input_data_utils.F90src/ionosphere/waccmx/ltr_module.F90doc/ChangeLogsrc/ionosphere/waccmx/amie_module.F909da3b9661381a9dfba3c7b0a09d05f17dadd157f1654795929000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog edits; improve error handling; other minor misc changes modified: doc/ChangeLog modified: src/chemistry/utils/input_data_utils.F90 modified: src/ionosphere/waccmx/amie_module.F90 modified: src/ionosphere/waccmx/ltr_module.F90 2022-06-09 11:32:09 -06009da3b9661381a9dfba3c7b0a09d05f17dadd157fChangeLog edits; improve error handling; other minor misc changeseditsrc/ionosphere/waccmx/amie_module.F90editsrc/chemistry/utils/input_data_utils.F90editsrc/ionosphere/waccmx/ltr_module.F90editdoc/ChangeLogcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_ltr/shell_commandse28d367b6348a84b715abd20c02cb4bf5a086e6f1654807408000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadjustments to LTR waccmx tests modified: cime_config/testdefs/testlist_cam.xml modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_ltr/shell_commands 2022-06-09 14:43:28 -0600e28d367b6348a84b715abd20c02cb4bf5a086e6fadjustments to LTR waccmx testseditcime_config/testdefs/testlist_cam.xmleditcime_config/testdefs/testmods_dirs/cam/outfrq9s_ltr/shell_commandsdoc/ChangeLogf0a428a0a5a24566b7e104bb79fa85211457f1d31654809524000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2022-06-09 15:18:44 -0600f0a428a0a5a24566b7e104bb79fa85211457f1d3ChangeLog updateeditdoc/ChangeLogdoc/ChangeLogbe0aa4d8dd67720d9ec3b05137f24daebd745aba1655151460000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2022-06-13 14:17:40 -0600be0aa4d8dd67720d9ec3b05137f24daebd745abaChangeLog updateseditdoc/ChangeLogsrc/dynamics/fv/dyn_comp.F90src/dynamics/mpas/dp_coupling.F90src/utils/cam_thermo.F90src/utils/air_composition.F901eb7b2dd13ac059cb7518281258020c6539d57421655241787000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne6.cheyenne.ucar.edusmall fixes; cleanup 2022-06-14 15:23:07 -06001eb7b2dd13ac059cb7518281258020c6539d5742small fixes; cleanupeditsrc/utils/air_composition.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/fv/dyn_comp.F90editsrc/dynamics/mpas/dp_coupling.F90src/utils/air_composition.F90389b9d2551c24023bd6109a8c045324d66ce50241655276329000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne6.cheyenne.ucar.edufix get_dp_ref reference; revert air_composition indexing 2022-06-15 00:58:49 -0600389b9d2551c24023bd6109a8c045324d66ce5024fix get_dp_ref reference; revert air_composition indexingeditsrc/utils/air_composition.F90src/dynamics/se/dycore/prim_driver_mod.F90f3f5ad675fa0d70a25b06a6951f1480a75d5fc391655306406000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne2.cheyenne.ucar.edufix get_dp_ref function 2022-06-15 09:20:06 -0600f3f5ad675fa0d70a25b06a6951f1480a75d5fc39fix get_dp_ref functioneditsrc/dynamics/se/dycore/prim_driver_mod.F90src/utils/cam_thermo.F90src/utils/air_composition.F9090f4bc21f6973aba52890e1af4f03eb1ac34b96c1655411844000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne2.cheyenne.ucar.eduuse constants; clean up cam_thermo" 2022-06-16 14:37:24 -060090f4bc21f6973aba52890e1af4f03eb1ac34b96cuse constants; clean up cam_thermo"editsrc/utils/air_composition.F90editsrc/utils/cam_thermo.F90cime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/user_nl_camExternals_CAM.cfgcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/test_mech.in3d6d2e2641c408164902049b8ed1ba2f687775131655933441000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse chemistry preprocessor github repo for external; add chem preprocessor regression test modified: Externals_CAM.cfg modified: cime_config/testdefs/testlist_cam.xml new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/test_mech.in new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/user_nl_cam 2022-06-22 15:30:41 -06003d6d2e2641c408164902049b8ed1ba2f68777513use chemistry preprocessor github repo for external; add chem preprocessor regression testeditcime_config/testdefs/testlist_cam.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/user_nl_cameditExternals_CAM.cfgaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/test_mech.inaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/shell_commandssrc/physics/cam/cam_diagnostics.F90src/physics/cam/physpkg.F90src/physics/cam/clubb_intr.F90src/physics/cam/micro_pumas_cam.F90src/physics/cam/check_energy.F90a58d0253f8d0753f1c5025c430a1bea638b19f4c1655939958000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comremoved time-step output, addressed Cheryl's first review 2022-06-22 17:19:18 -0600a58d0253f8d0753f1c5025c430a1bea638b19f4cremoved time-step output, addressed Cheryl's first revieweditsrc/physics/cam/clubb_intr.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/physics/cam/micro_pumas_cam.F90src/physics/rrtmg/radiation.F9015008a35e17d6eb04e3a08bf1a460b84bcc7c23c1655940074000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comoops forgot to remove tstep mods in radiation 2022-06-22 17:21:14 -060015008a35e17d6eb04e3a08bf1a460b84bcc7c23coops forgot to remove tstep mods in radiationeditsrc/physics/rrtmg/radiation.F90src/physics/cam/clubb_intr.F90d39d007d09687bd90661d2d4c778e0f3e29274471655944977000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.commods to fix issue 582 2022-06-22 18:42:57 -0600d39d007d09687bd90661d2d4c778e0f3e2927447mods to fix issue 582editsrc/physics/cam/clubb_intr.F90Externals_CAM.cfg67688199a2be45352df48b1c7e4a987ec6b0ba6a1655945124000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate chem_proc external to a tag 2022-06-22 18:45:24 -060067688199a2be45352df48b1c7e4a987ec6b0ba6aupdate chem_proc external to a tageditExternals_CAM.cfgsrc/physics/cam_dev/physpkg.F90e85e3bcd4b1e80acb5a906e5e483b2856e14e4401655945247000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comcleanup pbuf pointers in tphysac_init 2022-06-22 18:47:27 -0600e85e3bcd4b1e80acb5a906e5e483b2856e14e440cleanup pbuf pointers in tphysac_initeditsrc/physics/cam_dev/physpkg.F90src/physics/cam/clubb_intr.F902b0114425a71361186bf2d33903d5fad9be666151655998783000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadded reference to scaling surface fluxes by exner 2022-06-23 09:39:43 -06002b0114425a71361186bf2d33903d5fad9be66615added reference to scaling surface fluxes by exnereditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90src/physics/cam/convect_shallow.F90src/physics/cam_dev/convect_diagnostics.F9079e181ddea425bbbdd474e07521310ac86b30a181656207220000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comfixed exner issue with PBLH calc, cleanup inv_exner array 2022-06-25 19:33:40 -060079e181ddea425bbbdd474e07521310ac86b30a18fixed exner issue with PBLH calc, cleanup inv_exner arrayeditsrc/physics/cam/clubb_intr.F90editsrc/physics/cam/convect_shallow.F90editsrc/physics/cam_dev/convect_diagnostics.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90008b4de701b14232d9d0c7ee8f90543ed98eaafc1656343660000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduSpecify imports; removed redundant nmasses in constructor; add allocated checks modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 2022-06-27 09:27:40 -0600008b4de701b14232d9d0c7ee8f90543ed98eaafcSpecify imports; removed redundant nmasses in constructor; add allocated checkseditsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/microp_aero.F90src/physics/spcam/crm_physics.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F900c244d396f652c73e6a739d170d0f4e2eec70ec11656351647000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimprove documentation; some code cleanup modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/microp_aero.F90 modified: src/physics/spcam/crm_physics.F90 2022-06-27 11:40:47 -06000c244d396f652c73e6a739d170d0f4e2eec70ec1improve documentation; some code cleanupeditsrc/physics/cam/microp_aero.F90editsrc/physics/spcam/crm_physics.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F9058e2a50aec006b4721b290b933c280081a84fa681656362874000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement geneneric num conc limiter routine modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 2022-06-27 14:47:54 -060058e2a50aec006b4721b290b933c280081a84fa68implement geneneric num conc limiter routineeditsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F906b605db3e7496eb3a1824c7391b593abd77f3d681656417688000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educheck allocate status; use longer iterator names modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 2022-06-28 06:01:28 -06006b605db3e7496eb3a1824c7391b593abd77f3d68check allocate status; use longer iterator nameseditsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/dynamics/se/dycore/global_norms_mod.F90src/control/cam_snapshot_common.F90beecf8beaefa494d45bff7320a6fa8d9143079781656448337000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd the bug fix files 2022-06-28 14:32:17 -0600beecf8beaefa494d45bff7320a6fa8d914307978Add the bug fix fileseditsrc/control/cam_snapshot_common.F90editsrc/dynamics/se/dycore/global_norms_mod.F90src/physics/cam/clubb_intr.F903e2f64edf5d026201e9d05811a3bfd94622da3421656462968000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comaddressed part 2 of cheryls initial review 2022-06-28 18:36:08 -06003e2f64edf5d026201e9d05811a3bfd94622da342addressed part 2 of cheryls initial revieweditsrc/physics/cam/clubb_intr.F90src/physics/cam_dev/physpkg.F90src/physics/cam/ndrop.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/chemistry/modal_aero/modal_aero_convproc.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F909d7ec7294e4b6bcbb82e637892d5513b1b82aa571656510981000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse null() initializer; improvements to comments; minor code clean up modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/chemistry/modal_aero/modal_aero_convproc.F90 modified: src/physics/cam/ndrop.F90 modified: src/physics/cam_dev/physpkg.F90 2022-06-29 07:56:21 -06009d7ec7294e4b6bcbb82e637892d5513b1b82aa57use null() initializer; improvements to comments; minor code clean upeditsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/modal_aero/modal_aero_convproc.F90editsrc/physics/cam_dev/physpkg.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/physics/cam/ndrop.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90src/dynamics/se/dycore/global_norms_mod.F90f25f240b50caeaac58e9346a3105c1e529d60f2b1656529617000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduCleanup information writes 2022-06-29 13:06:57 -0600f25f240b50caeaac58e9346a3105c1e529d60f2bCleanup information writeseditsrc/dynamics/se/dycore/global_norms_mod.F90src/chemistry/mozart/mo_neu_wetdep.F90src/cpl/nuopc/atm_comp_nuopc.F90src/cpl/nuopc/atm_import_export.F9070422a432a05136b793fc2be2af7f48120b419aa1656530783000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurename "set_options" as "read_fields_namelists" modified: src/chemistry/mozart/mo_neu_wetdep.F90 modified: src/cpl/nuopc/atm_comp_nuopc.F90 modified: src/cpl/nuopc/atm_import_export.F90 2022-06-29 13:26:23 -060070422a432a05136b793fc2be2af7f48120b419aarename "set_options" as "read_fields_namelists"editsrc/cpl/nuopc/atm_comp_nuopc.F90editsrc/chemistry/mozart/mo_neu_wetdep.F90editsrc/cpl/nuopc/atm_import_export.F90src/physics/simple/frierson.F90src/physics/simple/frierson_cam.F90src/physics/simple/physpkg.F903e836968483b055f06a38a537e010e24b4e8a2111656538451000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove frierson_convection 2022-06-29 15:34:11 -06003e836968483b055f06a38a537e010e24b4e8a211Remove frierson_convectioneditsrc/physics/simple/frierson_cam.F90editsrc/physics/simple/physpkg.F90editsrc/physics/simple/frierson.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/microp_aero.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F903b82735378ca3b5d0cf1576ee99d988ab48f77531656595187000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore allocate status checks modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/microp_aero.F90 2022-06-30 07:19:47 -06003b82735378ca3b5d0cf1576ee99d988ab48f7753more allocate status checkseditsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/physics/cam/microp_aero.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/dynamics/se/dycore/global_norms_mod.F90f29a6d5037a9a7b88f128fc8fd386a69dfd839601656601287000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemoved unnecessary diagnostic message 2022-06-30 09:01:27 -0600f29a6d5037a9a7b88f128fc8fd386a69dfd83960Removed unnecessary diagnostic messageeditsrc/dynamics/se/dycore/global_norms_mod.F90src/physics/cam/ndrop.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90454ab2b4018acc2db083fb156ac87bc83f38a37b1656646759000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd allocate status check; expand on comment modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/physics/cam/ndrop.F90 2022-06-30 21:39:19 -0600454ab2b4018acc2db083fb156ac87bc83f38a37badd allocate status check; expand on commenteditsrc/physics/cam/ndrop.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90doc/ChangeLog53e07f8ee44eea31d964cbeb09532770dab08b2e1656690637000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_065 2022-07-01 09:50:37 -060053e07f8ee44eea31d964cbeb09532770dab08b2eUpdate ChangeLog for cam6_3_065editdoc/ChangeLogsrc/physics/cam/clubb_intr.F90e4e25b6c966ce5d5419bb2579601c4487fd610ea1656950135000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comaddressed Peter's edits; scale sfc fluxes by lowest mid-level pressure, density 2022-07-04 09:55:35 -0600e4e25b6c966ce5d5419bb2579601c4487fd610eaaddressed Peter's edits; scale sfc fluxes by lowest mid-level pressure, densityeditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F901362ed29af48d1918ba76c13285e1a1f134a61441656950444000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.com3d cpairv for sensible heat flux bc 2022-07-04 10:00:44 -06001362ed29af48d1918ba76c13285e1a1f134a61443d cpairv for sensible heat flux bceditsrc/physics/cam/clubb_intr.F90src/cpl/nuopc/atm_comp_nuopc.F90src/cpl/nuopc/atm_import_export.F90eb225e831902f3e4bc4fb95449a5f3ed2e84c0401657031028000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduUse "read_surface_fields_namelists" subroutine name; minor updates to comments modified: src/cpl/nuopc/atm_comp_nuopc.F90 modified: src/cpl/nuopc/atm_import_export.F90 2022-07-05 08:23:48 -0600eb225e831902f3e4bc4fb95449a5f3ed2e84c040Use "read_surface_fields_namelists" subroutine name; minor updates to commentseditsrc/cpl/nuopc/atm_comp_nuopc.F90editsrc/cpl/nuopc/atm_import_export.F90src/physics/cam_dev/physpkg.F90src/physics/cam/cam_diagnostics.F90src/physics/cam/physpkg.F90src/physics/cam/clubb_intr.F90fdf58f8295ad2ebcdfaa9c5076a3e16470d57b2d1657038580000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comaddressed Jesse's first review 2022-07-05 10:29:40 -0600fdf58f8295ad2ebcdfaa9c5076a3e16470d57b2daddressed Jesse's first revieweditsrc/physics/cam/cam_diagnostics.F90editsrc/physics/cam/clubb_intr.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam_dev/physpkg.F90src/physics/cam/physpkg.F90src/physics/cam/cam_diagnostics.F90bbaafd13ea5e37fe257dbdae736310e9450d37581657054256000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix a couple of minor issues 2022-07-05 14:50:56 -0600bbaafd13ea5e37fe257dbdae736310e9450d3758Fix a couple of minor issueseditsrc/physics/cam/physpkg.F90editsrc/physics/cam/cam_diagnostics.F90src/physics/cam/ndrop.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F9073255c63085e11691beb3022b10907f83926ecd51657075420000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduReplace t0 with physconst tmelt; tweak comments modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/physics/cam/ndrop.F90 2022-07-05 20:43:40 -060073255c63085e11691beb3022b10907f83926ecd5Replace t0 with physconst tmelt; tweak commentseditsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/physics/cam/ndrop.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90src/physics/cam/clubb_intr.F90126a05c65ea615c64258933825f8fb8687c606991657139114000http://carson.math.uwm.edu/jenkins/user/aherringaherringaherring@izumi.cgd.ucar.edufixed outfld bugs 2022-07-06 14:25:14 -0600126a05c65ea615c64258933825f8fb8687c60699fixed outfld bugseditsrc/physics/cam/clubb_intr.F90src/physics/simple/frierson_cam.F90944d39b085992e7e5e0cf1eb5a1a1af9021cba971657146012000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove extraneous comment 2022-07-06 16:20:12 -0600944d39b085992e7e5e0cf1eb5a1a1af9021cba97Remove extraneous commenteditsrc/physics/simple/frierson_cam.F90src/physics/cam/microp_aero.F905d6c1bf8a6292afe2eeb83dc0ab0ed5e2f1537c11657149601000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduInitialize aerosol state object with nullify modified: src/physics/cam/microp_aero.F90 2022-07-06 17:20:01 -06005d6c1bf8a6292afe2eeb83dc0ab0ed5e2f1537c1Initialize aerosol state object with nullifyeditsrc/physics/cam/microp_aero.F90cime_config/testdefs/testmods_dirs/cam/silhs/user_nl_camsrc/physics/cam/subcol_SILHS.F90a610dd87039dd8f3acdc4b0f82adbd94b12302661657154102000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comfixed sihls test fail 2022-07-06 18:35:02 -0600a610dd87039dd8f3acdc4b0f82adbd94b1230266fixed sihls test faileditsrc/physics/cam/subcol_SILHS.F90editcime_config/testdefs/testmods_dirs/cam/silhs/user_nl_camdoc/ChangeLogfcfddea10e13e21e7f4c6e0e0c2d858dd1afd5171657218324000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduPreliminary ChangeLog 2022-07-07 12:25:24 -0600fcfddea10e13e21e7f4c6e0e0c2d858dd1afd517Preliminary ChangeLogeditdoc/ChangeLogsrc/physics/cam_dev/micro_pumas_cam.F9082df5e6b24c722d5cb9c0a4f59b318aa4a4497c51657223518000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove MG1 and prototype DDT with a couple of fields 2022-07-07 13:51:58 -060082df5e6b24c722d5cb9c0a4f59b318aa4a4497c5Remove MG1 and prototype DDT with a couple of fieldseditsrc/physics/cam_dev/micro_pumas_cam.F90doc/ChangeLog9f261802895b317a2b4d52792010d69e59b1b30c1657230912000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadded ChangeLog text 2022-07-07 15:55:12 -06009f261802895b317a2b4d52792010d69e59b1b30cadded ChangeLog texteditdoc/ChangeLogdoc/ChangeLog39be43cb2c06bbdc2a451f737a8de9c1b211b21c1657231298000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comChangeLog one line summary 2022-07-07 16:01:38 -060039be43cb2c06bbdc2a451f737a8de9c1b211b21cChangeLog one line summaryeditdoc/ChangeLogsrc/control/runtime_opts.F90bld/build-namelistsrc/physics/cam/physpkg.F90src/chemistry/mozart/upper_bc_file.F90cime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/shell_commandssrc/chemistry/utils/tracer_data.F90src/chemistry/mozart/chemistry.F90src/chemistry/utils/mo_msis_ubc.F90src/physics/waccmx/majorsp_diffusion.F90src/chemistry/mozart/mo_tgcm_ubc.F90src/physics/cam/diffusion_solver.F90bld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/upper_bc.F90cime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/user_nl_camsrc/physics/cam/vertical_diffusion.F90src/physics/cam/constituents.F908f7a4b9b8cc5554f658645df2c51c03d66f1d03e1657288130000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhanges for specifying upper boundary conditions via namelist options modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml new file: cime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/user_nl_clm modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/mo_tgcm_ubc.F90 modified: src/chemistry/mozart/upper_bc.F90 new file: src/chemistry/mozart/upper_bc_file.F90 modified: src/chemistry/utils/mo_msis_ubc.F90 modified: src/chemistry/utils/tracer_data.F90 modified: src/control/runtime_opts.F90 modified: src/physics/cam/constituents.F90 modified: src/physics/cam/diffusion_solver.F90 modified: src/physics/cam/physpkg.F90 modified: src/physics/cam/vertical_diffusion.F90 modified: src/physics/waccmx/majorsp_diffusion.F90 2022-07-08 07:48:50 -06008f7a4b9b8cc5554f658645df2c51c03d66f1d03echanges for specifying upper boundary conditions via namelist optionseditsrc/physics/cam/diffusion_solver.F90editbld/build-namelisteditbld/namelist_files/namelist_definition.xmladdsrc/chemistry/mozart/upper_bc_file.F90editsrc/control/runtime_opts.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam/vertical_diffusion.F90editsrc/physics/waccmx/majorsp_diffusion.F90editsrc/chemistry/mozart/chemistry.F90editbld/namelist_files/namelist_defaults_cam.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/user_nl_clmeditsrc/physics/cam/constituents.F90addcime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq3h_fubc/user_nl_cameditsrc/chemistry/utils/mo_msis_ubc.F90editsrc/chemistry/utils/tracer_data.F90editsrc/chemistry/mozart/upper_bc.F90editsrc/chemistry/mozart/mo_tgcm_ubc.F90src/physics/cam/diffusion_solver.F900c924d6049a5995ff45ee5fadda13c79cc26c1931657295226000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd check for cnst_fixed_ubc optional argument is present modified: src/physics/cam/diffusion_solver.F90 2022-07-08 09:47:06 -06000c924d6049a5995ff45ee5fadda13c79cc26c193add check for cnst_fixed_ubc optional argument is presenteditsrc/physics/cam/diffusion_solver.F90doc/ChangeLog343e48721c174554092caa8ff4235860f81517a11657307595000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog entries 2022-07-08 13:13:15 -0600343e48721c174554092caa8ff4235860f81517a1ChangeLog entrieseditdoc/ChangeLogdoc/ChangeLog9fbe5b997561b3489fb2749bc1a3213d2cdc946b1657316675000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrection to ChangeLog 2022-07-08 15:44:35 -06009fbe5b997561b3489fb2749bc1a3213d2cdc946bcorrection to ChangeLogeditdoc/ChangeLogdoc/ChangeLogbld/namelist_files/namelist_definition.xml9df71ffed509549f3e55233b75055180c6ebf8f41657321660000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2022-07-08 17:07:40 -06009df71ffed509549f3e55233b75055180c6ebf8f4ChangeLog drafteditbld/namelist_files/namelist_definition.xmleditdoc/ChangeLogsrc/utils/cam_thermo.F90d3200ad22f398a777f6eaef0162a686e824acad21657577056000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne3.cheyenne.ucar.eduFIX PARENTHESIS 2022-07-11 16:04:16 -0600d3200ad22f398a777f6eaef0162a686e824acad2FIX PARENTHESISeditsrc/utils/cam_thermo.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/control/cam_comp.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90src/dynamics/fv/stepon.F9020d3a35cc48d3479264280988101f557caf8e4101657640743000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChanges to the transported interfaces and initial implementation of invocation in stepon modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/control/cam_comp.F90 modified: src/dynamics/fv/stepon.F90 2022-07-12 09:45:43 -060020d3a35cc48d3479264280988101f557caf8e410Changes to the transported interfaces and initial implementation of invocation in steponeditsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/dynamics/fv/stepon.F90editsrc/control/cam_comp.F90Externals.cfgc7bac03fbe112e76dbbf7a241a6bd5dbaaf1de221657774477000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate externals 2022-07-13 22:54:37 -0600c7bac03fbe112e76dbbf7a241a6bd5dbaaf1de22Update externalseditExternals.cfgcime_config/testdefs/testlist_cam.xmldoc/ChangeLoge016a9ac00eece1bf51cd9f20e7fff012f8630221657812578000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMoved test from izumi to cheyenne 2022-07-14 09:29:38 -0600e016a9ac00eece1bf51cd9f20e7fff012f863022Moved test from izumi to cheyenneeditcime_config/testdefs/testlist_cam.xmleditdoc/ChangeLogExternals.cfge96142a880dd47a9bad2a5c57346b2f10b3b53d81657814185000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate CTSM external 2022-07-14 09:56:25 -0600e96142a880dd47a9bad2a5c57346b2f10b3b53d8Update CTSM externaleditExternals.cfgdoc/ChangeLogfc4f3cbd024e4a8fecf8a9534ef87d0299797faf1657829954000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_069 2022-07-14 14:19:14 -0600fc4f3cbd024e4a8fecf8a9534ef87d0299797fafUpdate ChangeLog for cam6_3_069editdoc/ChangeLogExternals.cfg865a763ff810f9723072fda4d65def127e7a1ca51657831778000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate CTSM tag to dev103 - bug fix tag 2022-07-14 14:49:38 -0600865a763ff810f9723072fda4d65def127e7a1ca5Update CTSM tag to dev103 - bug fix tageditExternals.cfgdoc/ChangeLog30a8b29d03457fbe78565a640552922a8dd9f8451657917797000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_070 2022-07-15 14:43:17 -060030a8b29d03457fbe78565a640552922a8dd9f845Update ChangeLog for cam6_3_070editdoc/ChangeLogsrc/physics/cam_dev/micro_pumas_cam.F90987215617f13a165c7df1b82c20ab8991a1429f91658175651000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFirst major chunk of variables in ddt 2022-07-18 14:20:51 -0600987215617f13a165c7df1b82c20ab8991a1429f9First major chunk of variables in ddteditsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/waccm/nlte_aliarms.F90src/physics/waccm/nlte_lw.F906cb41a5f4691a8b7c678eccf5c97c57b5ca5ce791658263570000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress reviewer's comments 2022-07-19 14:46:10 -06006cb41a5f4691a8b7c678eccf5c97c57b5ca5ce79Address reviewer's commentseditsrc/physics/waccm/nlte_lw.F90editsrc/physics/waccm/nlte_aliarms.F90src/utils/cam_thermo.F90src/dynamics/se/dycore/prim_advance_mod.F9004cfbf53d4cf7a04231a539dfe569cc186f78d231658347587000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne5.cheyenne.ucar.eduaddress first round of review 2022-07-20 14:06:27 -060004cfbf53d4cf7a04231a539dfe569cc186f78d23address first round of revieweditsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/utils/cam_thermo.F90src/ionosphere/waccmx/edyn_init.F90c9f48b6cf6783c85e08e9abbf93b7c6780dae5ef1658435141000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduCorrections to coordinate maps for oplus and geomag history grids modified: src/ionosphere/waccmx/edyn_init.F90 2022-07-21 14:25:41 -0600c9f48b6cf6783c85e08e9abbf93b7c6780dae5efCorrections to coordinate maps for oplus and geomag history gridseditsrc/ionosphere/waccmx/edyn_init.F90cime_config/testdefs/testlist_cam.xmlcb51740dc4e5373df8b8335395b75a64e42e1d941658441139000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumoved waccmx test back to izumi 2022-07-21 16:05:39 -0600cb51740dc4e5373df8b8335395b75a64e42e1d94moved waccmx test back to izumieditcime_config/testdefs/testlist_cam.xmlsrc/chemistry/mozart/mo_gas_phase_chemdr.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/chemistry.F90doc/ChangeLogsrc/chemistry/mozart/noy_ubc.F90ae9b3ff694dc4b83e38223a4ea50cbe14c3207831658513014000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove obsolete noy_ubc module deleted: src/chemistry/mozart/noy_ubc.F90 modified: bld/namelist_files/namelist_definition.xml modified: doc/ChangeLog modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/mo_gas_phase_chemdr.F90 2022-07-22 12:03:34 -0600ae9b3ff694dc4b83e38223a4ea50cbe14c320783remove obsolete noy_ubc moduleeditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90editdoc/ChangeLogdeletesrc/chemistry/mozart/noy_ubc.F90editbld/namelist_files/namelist_definition.xmleditsrc/chemistry/mozart/chemistry.F90cime_config/testdefs/testlist_cam.xmlcime_config/config_pes.xmlcime_config/testdefs/testmods_dirs/cam/waccmx_weimer/shell_commands86621e9ed4c7c63e078f337bf79a9299b2e652d01658516098000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduincrease ntasks for f09 waccmx; specify pelayout for f09 wiemer test; set ROF_NCPL for weimer test modified: cime_config/config_pes.xml modified: cime_config/testdefs/testlist_cam.xml modified: cime_config/testdefs/testmods_dirs/cam/waccmx_weimer/shell_commands 2022-07-22 12:54:58 -060086621e9ed4c7c63e078f337bf79a9299b2e652d0increase ntasks for f09 waccmx; specify pelayout for f09 wiemer test; set ROF_NCPL for weimer testeditcime_config/testdefs/testmods_dirs/cam/waccmx_weimer/shell_commandseditcime_config/config_pes.xmleditcime_config/testdefs/testlist_cam.xmlsrc/chemistry/mozart/upper_bc.F90src/chemistry/mozart/mo_tgcm_ubc.F90doc/ChangeLogsrc/chemistry/utils/mo_msis_ubc.F90src/chemistry/mozart/upper_bc_file.F901a5cee7a9905503d959449ed90d3125ff5623f1b1658849272000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educheck allocate and bcast status and other minor changes modified: doc/ChangeLog modified: src/chemistry/mozart/mo_tgcm_ubc.F90 modified: src/chemistry/mozart/upper_bc.F90 modified: src/chemistry/mozart/upper_bc_file.F90 modified: src/chemistry/utils/mo_msis_ubc.F90 2022-07-26 09:27:52 -06001a5cee7a9905503d959449ed90d3125ff5623f1bcheck allocate and bcast status and other minor changeseditdoc/ChangeLogeditsrc/chemistry/utils/mo_msis_ubc.F90editsrc/chemistry/mozart/upper_bc.F90editsrc/chemistry/mozart/mo_tgcm_ubc.F90editsrc/chemistry/mozart/upper_bc_file.F90src/utils/cam_thermo.F90src/utils/physconst.F90src/utils/air_composition.F90028158aeecdfd75a72c81ea7b0368b289cdac0411658854253000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne5.cheyenne.ucar.eduaddress review comments 2022-07-26 10:50:53 -0600028158aeecdfd75a72c81ea7b0368b289cdac041address review commentseditsrc/utils/physconst.F90editsrc/utils/air_composition.F90editsrc/utils/cam_thermo.F90Externals.cfgd54dd7851546f6b28ab6bc6055494fe3679903131658871520000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduUse offical tags for externals modified: Externals.cfg 2022-07-26 15:38:40 -0600d54dd7851546f6b28ab6bc6055494fe367990313Use offical tags for externalseditExternals.cfgsrc/chemistry/mozart/charge_neutrality.F90src/utils/air_composition.F90src/physics/cam/clubb_intr.F90src/utils/physconst.F90src/chemistry/mozart/mee_ionization.F90src/chemistry/mozart/mo_waccm_hrates.F90src/physics/waccmx/majorsp_diffusion.F90src/dynamics/fv3/dp_coupling.F90src/physics/simple/held_suarez_cam.F90src/dynamics/fv/dp_coupling.F90src/utils/cam_thermo.F90src/physics/waccm/nlte_lw.F90src/physics/cam/diffusion_solver.F90src/physics/cam/dadadj_cam.F90src/physics/waccm/iondrag.F90src/physics/cam/vertical_diffusion.F90src/physics/waccmx/ion_electron_temp.F90src/physics/cam/molec_diff.F90src/physics/waccm/radheat.F90src/physics/cam/eddy_diff_cam.F90src/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/mpas/dp_coupling.F90src/physics/cam/gw_drag.F90src/dynamics/eul/dp_coupling.F90src/dynamics/se/dp_coupling.F90src/physics/waccmx/steady_state_tei.F90src/physics/cam/check_energy.F90src/physics/cam/cam_diagnostics.F90src/chemistry/mozart/upper_bc.F90src/chemistry/mozart/epp_ionization.F90src/physics/cam/physics_types.F905e1825123e92092a00c438d9f5434d6551c0aa8b1658896663000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne5.cheyenne.ucar.eduaddress review comments; move some interfaces to air_composition 2022-07-26 22:37:43 -06005e1825123e92092a00c438d9f5434d6551c0aa8baddress review comments; move some interfaces to air_compositioneditsrc/physics/cam/vertical_diffusion.F90editsrc/physics/waccm/iondrag.F90editsrc/physics/cam/eddy_diff_cam.F90editsrc/dynamics/fv3/dp_coupling.F90editsrc/chemistry/mozart/epp_ionization.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/physics/waccmx/ion_electron_temp.F90editsrc/dynamics/se/dp_coupling.F90editsrc/physics/cam/gw_drag.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/chemistry/mozart/mo_waccm_hrates.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam/diffusion_solver.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/physics/simple/held_suarez_cam.F90editsrc/physics/waccmx/majorsp_diffusion.F90editsrc/physics/cam/physics_types.F90editsrc/chemistry/mozart/upper_bc.F90editsrc/utils/physconst.F90editsrc/dynamics/fv/dp_coupling.F90editsrc/physics/cam/dadadj_cam.F90editsrc/physics/waccm/radheat.F90editsrc/utils/air_composition.F90editsrc/chemistry/mozart/mee_ionization.F90editsrc/physics/waccm/nlte_lw.F90editsrc/dynamics/eul/dp_coupling.F90editsrc/chemistry/mozart/charge_neutrality.F90editsrc/physics/waccmx/steady_state_tei.F90editsrc/physics/cam/molec_diff.F90editsrc/physics/cam/clubb_intr.F90cime_config/testdefs/testlist_cam.xml965c39d966e624c7cb26532fbdb6f6ec39c36c681658930048000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumove FW4madSD izumi test from nag to gnu modified: cime_config/testdefs/testlist_cam.xml 2022-07-27 07:54:08 -0600965c39d966e624c7cb26532fbdb6f6ec39c36c68move FW4madSD izumi test from nag to gnueditcime_config/testdefs/testlist_cam.xmlsrc/utils/cam_thermo.F90src/dynamics/se/dycore/prim_advection_mod.F90f7b486bfabaad8b615e15a98c77c5cffa3687c2e1658941850000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne5.cheyenne.ucar.educhange get_thermal_energy to get_enthalpy_energy 2022-07-27 11:10:50 -0600f7b486bfabaad8b615e15a98c77c5cffa3687c2echange get_thermal_energy to get_enthalpy_energyeditsrc/dynamics/se/dycore/prim_advection_mod.F90editsrc/utils/cam_thermo.F90src/utils/cam_thermo.F90src/dynamics/se/dycore/prim_advection_mod.F907c5b724d502a09c2a7f2f23e7313bb84691ab4041659022940000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne5.cheyenne.ucar.educhange get_enthalpy_energy to get_enthalpy 2022-07-28 09:42:20 -06007c5b724d502a09c2a7f2f23e7313bb84691ab404change get_enthalpy_energy to get_enthalpyeditsrc/utils/cam_thermo.F90editsrc/dynamics/se/dycore/prim_advection_mod.F90src/physics/cam/microp_aero.F90src/control/cam_comp.F90src/physics/cam/physpkg.F90src/chemistry/aerosol/aerosol_state_mod.F90src/dynamics/fv/stepon.F90f3e54ff35dc4861d8e09bc687829b1797b8925971659096832000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduin stepon use aerosol state objects created in microp_aero modified: src/control/cam_comp.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/dynamics/fv/stepon.F90 modified: src/physics/cam/microp_aero.F90 modified: src/physics/cam/physpkg.F90 2022-07-29 06:13:52 -0600f3e54ff35dc4861d8e09bc687829b1797b892597in stepon use aerosol state objects created in microp_aeroeditsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/physics/cam/microp_aero.F90editsrc/dynamics/fv/stepon.F90editsrc/physics/cam/physpkg.F90editsrc/control/cam_comp.F90Externals.cfg69ee39e031f00e98af2bad2c54083418ec600c051659105801000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educcs_config external update to include NAG compiler mismatch flag for mpi-serial builds -- needed for NAG SCAM test on izumi modified: Externals.cfg 2022-07-29 08:43:21 -060069ee39e031f00e98af2bad2c54083418ec600c05ccs_config external update to include NAG compiler mismatch flag for mpi-serial builds -- needed for NAG SCAM test on izumieditExternals.cfgExternals.cfg4db22a936aae5c335699fbc1fa805fb7bb45f31c1659109294000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurevert ccs_config external -- will use nag_compiler branch changes when merge to head of cam_develpment modified: Externals.cfg 2022-07-29 09:41:34 -06004db22a936aae5c335699fbc1fa805fb7bb45f31crevert ccs_config external -- will use nag_compiler branch changes when merge to head of cam_develpmenteditExternals.cfgsrc/physics/cam_dev/physpkg.F909d09699a68a244b7672b624074f11081de15d2831659110135000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educam_dev correction modified: src/physics/cam_dev/physpkg.F90 2022-07-29 09:55:35 -06009d09699a68a244b7672b624074f11081de15d283cam_dev correctioneditsrc/physics/cam_dev/physpkg.F90src/physics/cam_dev/micro_pumas_cam.F908a8e52a1e4aa026d2ef6c0fac96ee12ae1b28fc21659118526000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduSecond chunk of variables in ddt 2022-07-29 12:15:26 -06008a8e52a1e4aa026d2ef6c0fac96ee12ae1b28fc2Second chunk of variables in ddteditsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/waccmx/ion_electron_temp.F90src/utils/cam_thermo.F90src/utils/air_composition.F90src/physics/waccm/nlte_lw.F90src/physics/waccmx/steady_state_tei.F90src/physics/cam/molec_diff.F90src/dynamics/fv/dyn_comp.F90src/dynamics/se/dycore/prim_advection_mod.F90src/dynamics/se/dycore/prim_advance_mod.F90src/utils/physconst.F90src/chemistry/mozart/mee_ionization.F903d2c95de7136168cda72fd539a7957f28ba61d4d1659138873000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne1.cheyenne.ucar.edunext wave of review comments 2022-07-29 17:54:33 -06003d2c95de7136168cda72fd539a7957f28ba61d4dnext wave of review commentseditsrc/physics/waccmx/ion_electron_temp.F90editsrc/physics/waccmx/steady_state_tei.F90editsrc/physics/cam/molec_diff.F90editsrc/dynamics/se/dycore/prim_advection_mod.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/fv/dyn_comp.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/utils/air_composition.F90editsrc/utils/physconst.F90editsrc/chemistry/mozart/mee_ionization.F90editsrc/physics/waccm/nlte_lw.F90src/dynamics/fv3/stepon.F90src/dynamics/mpas/stepon.F90src/physics/cam/zm_microphysics.F90src/dynamics/se/stepon.F90src/dynamics/eul/stepon.F90f342b8f491698dd098754bbe6b25d4a568ae94c21659376302000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement stepon mods in all dycores; nullify aero props obj in zm_microphysics modified: src/dynamics/eul/stepon.F90 modified: src/dynamics/fv3/stepon.F90 modified: src/dynamics/mpas/stepon.F90 modified: src/dynamics/se/stepon.F90 modified: src/physics/cam/zm_microphysics.F90 2022-08-01 11:51:42 -0600f342b8f491698dd098754bbe6b25d4a568ae94c2implement stepon mods in all dycores; nullify aero props obj in zm_microphysicseditsrc/dynamics/eul/stepon.F90editsrc/dynamics/fv3/stepon.F90editsrc/dynamics/mpas/stepon.F90editsrc/physics/cam/zm_microphysics.F90editsrc/dynamics/se/stepon.F90doc/ChangeLogec2dec787768fb5041912c39ec7b46531e1863c41659391942000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitial ChangeLog entries 2022-08-01 16:12:22 -0600ec2dec787768fb5041912c39ec7b46531e1863c4initial ChangeLog entrieseditdoc/ChangeLogdoc/ChangeLogd2e41966911dbd5524d82a489b21fc9ff0ea857a1659452692000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2022-08-02 09:04:52 -0600d2e41966911dbd5524d82a489b21fc9ff0ea857aChangeLog updateseditdoc/ChangeLogsrc/physics/cam/zonal_mean.F90src/physics/cam/nudging.F90727b15b024b5e4635219d3f3bd2921aafaf649821659452788000http://carson.math.uwm.edu/jenkins/user/patcpatcpatc@ucar.eduAdd zonal_mean.F90 and usage case in nudging.F90 2022-08-02 09:06:28 -0600727b15b024b5e4635219d3f3bd2921aafaf64982Add zonal_mean.F90 and usage case in nudging.F90editsrc/physics/cam/nudging.F90addsrc/physics/cam/zonal_mean.F90src/physics/cam/nudging.F9080dbce2a24b498d64276a1f7d82a979981a55a631659452938000http://carson.math.uwm.edu/jenkins/user/patcpatcpatc@ucar.eduChanged Zonal Filtering default to .false. 2022-08-02 09:08:58 -060080dbce2a24b498d64276a1f7d82a979981a55a63Changed Zonal Filtering default to .false.editsrc/physics/cam/nudging.F90src/physics/cam_dev/micro_pumas_cam.F906666fb6a215b2e1e227b544672a74a70969ef31e1659473456000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduCompleted initial list for DDT 2022-08-02 14:50:56 -06006666fb6a215b2e1e227b544672a74a70969ef31eCompleted initial list for DDTeditsrc/physics/cam_dev/micro_pumas_cam.F90doc/ChangeLogc66fb0538aa882fb2b38bc79ff0fb18e6eb6e56b1659547661000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2022-08-03 11:27:41 -0600c66fb0538aa882fb2b38bc79ff0fb18e6eb6e56bChangeLog updateseditdoc/ChangeLogsrc/physics/cam_dev/micro_pumas_cam.F905e86e64cc7299e89e88239f8d3db83e2ce66f1571659565195000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdded comment to clarify hole filling pbuf fields 2022-08-03 16:19:55 -06005e86e64cc7299e89e88239f8d3db83e2ce66f157Added comment to clarify hole filling pbuf fieldseditsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam_dev/micro_pumas_cam.F90c2aac05b35bc237363fcea4e32ec93379f6b9c391659567748000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMinor cleanup 2022-08-03 17:02:28 -0600c2aac05b35bc237363fcea4e32ec93379f6b9c39Minor cleanupeditsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F9025a9e2e0f7cbb40bc4b49dda9bbcd2fe70a3b4961659567963000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove commit of cam/micro_pumas_cam.F90 which should not have been made 2022-08-03 17:06:03 -060025a9e2e0f7cbb40bc4b49dda9bbcd2fe70a3b496Remove commit of cam/micro_pumas_cam.F90 which should not have been madeeditsrc/physics/cam/micro_pumas_cam.F90Externals_CAM.cfg1cdc45b9b2bf855da86c61757dca9b0dbd17ecf81659568083000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate external to temporary PUMAS hash 2022-08-03 17:08:03 -06001cdc45b9b2bf855da86c61757dca9b0dbd17ecf8Update external to temporary PUMAS hasheditExternals_CAM.cfgsrc/chemistry/aerosol/aerosol_state_mod.F901c9b81a667462f32da504b9019d13a5dd14f5f9c1659631034000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove the single grid box version of loadaer modified: src/chemistry/aerosol/aerosol_state_mod.F90 2022-08-04 10:37:14 -06001c9b81a667462f32da504b9019d13a5dd14f5f9cremove the single grid box version of loadaereditsrc/chemistry/aerosol/aerosol_state_mod.F90src/chemistry/utils/tracer_data.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/upper_bc.F90doc/ChangeLogsrc/chemistry/utils/mo_msis_ubc.F90f4f5179103973282c70d1098c462955f6ba497ab1659742849000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduMinor changes modified: bld/namelist_files/namelist_definition.xml modified: doc/ChangeLog modified: src/chemistry/mozart/upper_bc.F90 modified: src/chemistry/utils/mo_msis_ubc.F90 modified: src/chemistry/utils/tracer_data.F90 2022-08-05 17:40:49 -0600f4f5179103973282c70d1098c462955f6ba497abMinor changeseditsrc/chemistry/utils/mo_msis_ubc.F90editsrc/chemistry/utils/tracer_data.F90editbld/namelist_files/namelist_definition.xmleditsrc/chemistry/mozart/upper_bc.F90editdoc/ChangeLogbld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/mo_gas_phase_chemdr.F90src/chemistry/mozart/chemistry.F90c18732ddff86c584f5424bd05a2ec5e0b4c1830e1659970964000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comStructural update: Move variable definitions, fix namelist define 2022-08-08 11:02:44 -0400c18732ddff86c584f5424bd05a2ec5e0b4c1830eStructural update: Move variable definitions, fix namelist defineeditbld/namelist_files/namelist_definition.xmleditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90editsrc/chemistry/mozart/chemistry.F90src/chemistry/mozart/mo_extfrc.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/hco_cc_emissions.F90src/physics/cam/physpkg.F90src/chemistry/mozart/mo_srf_emissions.F90src/chemistry/mozart/mo_setext.F907160a059fa021c837b3874f37a128c3f4a0a14ed1659974868000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comSeparate srf_emissions and extfrc_set to hco_cc_emissions module to reduce clutter 2022-08-08 12:07:48 -04007160a059fa021c837b3874f37a128c3f4a0a14edSeparate srf_emissions and extfrc_set to hco_cc_emissions module to reduce clutteraddsrc/chemistry/mozart/hco_cc_emissions.F90editsrc/chemistry/mozart/mo_extfrc.F90editsrc/chemistry/mozart/mo_srf_emissions.F90editsrc/physics/cam/physpkg.F90editsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_setext.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/hco_cc_emissions.F909ef4fea3e337e7134b52ea7746637d6e4fc408831659977477000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFixes for compile 2022-08-08 12:51:17 -04009ef4fea3e337e7134b52ea7746637d6e4fc40883Fixes for compileeditsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/hco_cc_emissions.F90src/chemistry/mozart/mo_gas_phase_chemdr.F907ee19ac2a9bf98130c79ae2fcb0e134549974eac1659982521000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comNow lookup rxt_jno2_idx, rxt_joh_idx in gas_phase_chemdr_inti 2022-08-08 14:15:21 -04007ee19ac2a9bf98130c79ae2fcb0e134549974eacNow lookup rxt_jno2_idx, rxt_joh_idx in gas_phase_chemdr_intieditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90src/physics/cam_dev/micro_pumas_cam.F9017534571c80a6374eb11c49f4b63a9935ca5222b1659995015000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix dimension for addfld for UMR and UMS 2022-08-08 15:43:35 -060017534571c80a6374eb11c49f4b63a9935ca5222bFix dimension for addfld for UMR and UMSeditsrc/physics/cam_dev/micro_pumas_cam.F90src/chemistry/mozart/upper_bc.F90b2e3dbcbd88508cfbe99844a17e23928748a95c81660057437000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduDocument factor used in calculation of H fluxes at upper boundary modified: src/chemistry/mozart/upper_bc.F90 2022-08-09 09:03:57 -0600b2e3dbcbd88508cfbe99844a17e23928748a95c8Document factor used in calculation of H fluxes at upper boundaryeditsrc/chemistry/mozart/upper_bc.F90src/utils/physconst.F90src/dynamics/se/dycore/prim_advance_mod.F90cime_config/config_compsets.xml3a37f2b0c7edc84ae7112d8892e52db9260327301660072751000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdates for misc answer changing bug fixes 2022-08-09 13:19:11 -06003a37f2b0c7edc84ae7112d8892e52db926032730Updates for misc answer changing bug fixeseditsrc/utils/physconst.F90editcime_config/config_compsets.xmleditsrc/dynamics/se/dycore/prim_advance_mod.F90cime_config/config_compsets.xml9874378e1ce4926cd896338fab2defc82b4ce7661660072977000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRedid config_compsets cleanup 2022-08-09 13:22:57 -06009874378e1ce4926cd896338fab2defc82b4ce766Redid config_compsets cleanupeditcime_config/config_compsets.xmlsrc/utils/physconst.F90f93e0ba316c51719d59d230299d3bb86d1ec0d4e1660074082000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove factor for kv4 and kc4 per direction by Jesse 2022-08-09 13:41:22 -0600f93e0ba316c51719d59d230299d3bb86d1ec0d4eRemove factor for kv4 and kc4 per direction by Jesseeditsrc/utils/physconst.F90src/utils/physconst.F904ac79c2da6b87994f21e990e8699c0f6ea93c1921660075099000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove extra scale factors 2022-08-09 13:58:19 -06004ac79c2da6b87994f21e990e8699c0f6ea93c192Remove extra scale factorseditsrc/utils/physconst.F90src/utils/physconst.F90e9090903df6f34ad75ed7c2088c7e0c70171774b1660076997000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix typo 2022-08-09 14:29:57 -0600e9090903df6f34ad75ed7c2088c7e0c70171774bFix typoeditsrc/utils/physconst.F90src/utils/physconst.F909ec9ed2faada4e7ac4b485397f6eb9dd884cac9d1660158518000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemoved a couple of more areas which had factors which no longer needed 2022-08-10 13:08:38 -06009ec9ed2faada4e7ac4b485397f6eb9dd884cac9dRemoved a couple of more areas which had factors which no longer needededitsrc/utils/physconst.F90src/dynamics/se/dycore/prim_advance_mod.F90cime_config/config_compsets.xml6f3bcd6e1f97f42a8da8dc09bd33612631236b911660158686000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.edurevert back SE dycore and SSTICE changes. Will go in next PR 2022-08-10 13:11:26 -06006f3bcd6e1f97f42a8da8dc09bd33612631236b91revert back SE dycore and SSTICE changes. Will go in next PReditcime_config/config_compsets.xmleditsrc/dynamics/se/dycore/prim_advance_mod.F90src/utils/physconst.F909f7004418b97d7edabbb6dedb0c77a3fe8c13ac31660158975000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduCommit with SE and SSTICE bug fixes 2022-08-10 13:16:15 -06009f7004418b97d7edabbb6dedb0c77a3fe8c13ac3Commit with SE and SSTICE bug fixeseditsrc/utils/physconst.F90src/utils/physconst.F909fbc14ceefd14583c8471f12815dcc9a25dc0a5c1660160115000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduReplace a few more variables 2022-08-10 13:35:15 -06009fbc14ceefd14583c8471f12815dcc9a25dc0a5cReplace a few more variableseditsrc/utils/physconst.F90doc/ChangeLog2c7218137f8bedf5ab3856644757a34d1b4aa0731660244778000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_072 2022-08-11 13:06:18 -06002c7218137f8bedf5ab3856644757a34d1b4aa073Update ChangeLog for cam6_3_072editdoc/ChangeLogsrc/utils/physconst.F90e13a652b5aefe3ce596b90ecdde0a8cd715eccfd1660257410000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduApply new variables per Jesse's suggestion 2022-08-11 16:36:50 -0600e13a652b5aefe3ce596b90ecdde0a8cd715eccfdApply new variables per Jesse's suggestioneditsrc/utils/physconst.F90src/dynamics/se/dycore/prim_advance_mod.F90cime_config/config_compsets.xml52f89c91306f9ffd5961d4bc3a35951ec71933d11660337390000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduput back the cam6_3_072 files which were overwritten 2022-08-12 14:49:50 -060052f89c91306f9ffd5961d4bc3a35951ec71933d1put back the cam6_3_072 files which were overwritteneditcime_config/config_compsets.xmleditsrc/dynamics/se/dycore/prim_advance_mod.F90src/physics/cam_dev/physpkg.F90src/dynamics/se/dycore/fvm_mapping.F90bld/build-namelistsrc/dynamics/se/dycore/dimensions_mod.F90src/physics/cam/physpkg.F90src/dynamics/se/stepon.F90src/dynamics/se/dycore/global_norms_mod.F90src/dynamics/se/dycore/prim_advance_mod.F90src/control/cam_control_mod.F90src/dynamics/se/dycore/viscosity_mod.F90src/control/cam_comp.F90src/control/budgets.F90src/dynamics/se/dycore/prim_driver_mod.F90src/dynamics/se/dyn_comp.F90src/dynamics/se/restart_dynamics.F90src/physics/cam/budgets.F90src/dynamics/se/dp_coupling.F90bld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/check_energy.F90bld/namelist_files/namelist_definition.xmlsrc/physics/cam/cam_diagnostics.F90src/physics/cam/physics_types.F90src/dynamics/se/dycore/element_mod.F90src/physics/cam/constituents.F906ade69c1ac224ed26e88f2596d3d6a5b3741521c1660556186000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comdev with debug - working 2022-08-15 03:36:26 -06006ade69c1ac224ed26e88f2596d3d6a5b3741521cdev with debug - workingaddsrc/control/budgets.F90editsrc/dynamics/se/dp_coupling.F90editsrc/dynamics/se/dycore/fvm_mapping.F90editsrc/dynamics/se/dycore/prim_driver_mod.F90editsrc/control/cam_control_mod.F90editsrc/control/cam_comp.F90editsrc/dynamics/se/stepon.F90editsrc/dynamics/se/dycore/dimensions_mod.F90editsrc/dynamics/se/dycore/element_mod.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam/constituents.F90editsrc/physics/cam_dev/physpkg.F90editsrc/dynamics/se/dyn_comp.F90editsrc/physics/cam/physics_types.F90editsrc/dynamics/se/restart_dynamics.F90editsrc/physics/cam/cam_diagnostics.F90editbld/namelist_files/namelist_definition.xmleditsrc/dynamics/se/dycore/viscosity_mod.F90editbld/namelist_files/namelist_defaults_cam.xmldeletesrc/physics/cam/budgets.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editbld/build-namelisteditsrc/physics/cam/physpkg.F90editsrc/dynamics/se/dycore/global_norms_mod.F90src/dynamics/se/dyn_comp.F90src/control/budgets.F90src/dynamics/se/stepon.F90src/dynamics/se/dycore/prim_advance_mod.F90src/physics/cam/check_energy.F90ce29f55e3bdfe5fd1828c40f1b3ebd7443f57b7d1660557495000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comremove debug print 2022-08-15 03:58:15 -0600ce29f55e3bdfe5fd1828c40f1b3ebd7443f57b7dremove debug printeditsrc/physics/cam/check_energy.F90editsrc/dynamics/se/stepon.F90editsrc/dynamics/se/dyn_comp.F90editsrc/control/budgets.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90src/utils/physconst.F90ff26b8f5846c0004f2b924b7e0c733d43e7956751660582168000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduBack out changes, to allow changes to be bit-for-bit 2022-08-15 10:49:28 -0600ff26b8f5846c0004f2b924b7e0c733d43e795675Back out changes, to allow changes to be bit-for-biteditsrc/utils/physconst.F90Externals.cfg50c84a3d74d30adc7f03fa740208f40bff846ffd1660592675000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comfix Externals.cfg 2022-08-15 13:44:35 -060050c84a3d74d30adc7f03fa740208f40bff846ffdfix Externals.cfgeditExternals.cfgsrc/dynamics/se/dycore/fvm_control_volume_mod.F90src/physics/cam_dev/physpkg.F90src/control/cam_comp.F90src/physics/cam/physpkg.F90src/dynamics/se/dycore/prim_driver_mod.F90src/dynamics/se/stepon.F90src/dynamics/se/dp_coupling.F90src/physics/cam/check_energy.F90src/physics/cam/cam_diagnostics.F90src/physics/cam/physics_types.F90src/dynamics/se/dycore/prim_advance_mod.F90src/physics/cam/constituents.F90524706acc75b5f2015537dbbdc7e5fe0e93595521660601971000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comfix bugs while updating to cam6_3_072 - checked against Peter's script 2022-08-15 16:19:31 -0600524706acc75b5f2015537dbbdc7e5fe0e9359552fix bugs while updating to cam6_3_072 - checked against Peter's scripteditsrc/physics/cam/physpkg.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/control/cam_comp.F90editsrc/dynamics/se/dp_coupling.F90editsrc/dynamics/se/dycore/prim_driver_mod.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/physics_types.F90editsrc/dynamics/se/stepon.F90editsrc/physics/cam/constituents.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/dynamics/se/dycore/fvm_control_volume_mod.F90src/utils/physconst.F901a0fe0d9cb821a798e87cb7e7df1a1e090393ba11660670937000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRecommit all changes 2022-08-16 11:28:57 -06001a0fe0d9cb821a798e87cb7e7df1a1e090393ba1Recommit all changeseditsrc/utils/physconst.F90cime_config/testdefs/testmods_dirs/cam/outfrq3d/user_nl_cpld42b006007589587de9c490c3a90678dccb771571660840771000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove user_nl_cpl file to fix failing prebeta test 2022-08-18 10:39:31 -0600d42b006007589587de9c490c3a90678dccb77157Remove user_nl_cpl file to fix failing prebeta testdeletecime_config/testdefs/testmods_dirs/cam/outfrq3d/user_nl_cpldoc/ChangeLoge4ec20bb7b89f3a3aee0e91b9d3989e8da26d7461660845599000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_073 2022-08-18 11:59:59 -0600e4ec20bb7b89f3a3aee0e91b9d3989e8da26d746Update ChangeLog for cam6_3_073editdoc/ChangeLogsrc/utils/cam_thermo.F90src/utils/air_composition.F90eb9ae2de63fe1db9e2c7042e38f3feb9f7074daa1660879639000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne1.cheyenne.ucar.edumove diffusivity/conductivity constants to air_composition; remove pint_out optional argument 2022-08-18 21:27:19 -0600eb9ae2de63fe1db9e2c7042e38f3feb9f7074daamove diffusivity/conductivity constants to air_composition; remove pint_out optional argumenteditsrc/utils/cam_thermo.F90editsrc/utils/air_composition.F90src/utils/cam_thermo.F90c205e93fd1bbd52ad380ccfd0b18ef5b6283cbc71660881240000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne1.cheyenne.ucar.edufix import statment 2022-08-18 21:54:00 -0600c205e93fd1bbd52ad380ccfd0b18ef5b6283cbc7fix import statmenteditsrc/utils/cam_thermo.F90src/chemistry/utils/tracer_data.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/upper_bc.F90doc/ChangeLogsrc/chemistry/mozart/upper_bc_file.F906c97258cd1e931fc28fdb4759eb6c2c8658e63461660913611000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduCorrect PIO error handling, include more details on UBC inputs, misc changes modified: bld/namelist_files/namelist_definition.xml modified: doc/ChangeLog modified: src/chemistry/mozart/upper_bc.F90 modified: src/chemistry/mozart/upper_bc_file.F90 modified: src/chemistry/utils/tracer_data.F90 2022-08-19 06:53:31 -06006c97258cd1e931fc28fdb4759eb6c2c8658e6346Correct PIO error handling, include more details on UBC inputs, misc changeseditsrc/chemistry/mozart/upper_bc_file.F90editsrc/chemistry/utils/tracer_data.F90editbld/namelist_files/namelist_definition.xmleditdoc/ChangeLogeditsrc/chemistry/mozart/upper_bc.F90src/physics/cam/microp_aero.F90src/physics/cam/zm_microphysics.F90src/dynamics/se/stepon.F90src/dynamics/eul/stepon.F90src/dynamics/mpas/stepon.F90src/dynamics/fv3/stepon.F90src/dynamics/fv/stepon.F90245a6a6e8d82bb466f5e06d74a4b3be0b525939e1660934942000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement aerosol_properties_object interface modified: src/dynamics/eul/stepon.F90 modified: src/dynamics/fv/stepon.F90 modified: src/dynamics/fv3/stepon.F90 modified: src/dynamics/mpas/stepon.F90 modified: src/dynamics/se/stepon.F90 modified: src/physics/cam/microp_aero.F90 modified: src/physics/cam/zm_microphysics.F90 2022-08-19 12:49:02 -0600245a6a6e8d82bb466f5e06d74a4b3be0b525939eimplement aerosol_properties_object interfaceeditsrc/dynamics/se/stepon.F90editsrc/dynamics/mpas/stepon.F90editsrc/dynamics/fv/stepon.F90editsrc/physics/cam/zm_microphysics.F90editsrc/dynamics/fv3/stepon.F90editsrc/dynamics/eul/stepon.F90editsrc/physics/cam/microp_aero.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/upper_bc.F908fd87e2d675da77f65ee98f127e0b61dc93229091660938013000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduSome minor edits modified: bld/namelist_files/namelist_definition.xml modified: src/chemistry/mozart/upper_bc.F90 2022-08-19 13:40:13 -06008fd87e2d675da77f65ee98f127e0b61dc9322909Some minor editseditsrc/chemistry/mozart/upper_bc.F90editbld/namelist_files/namelist_definition.xmlsrc/physics/cam/microp_aero.F90src/physics/cam/ndrop.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/chemistry/modal_aero/modal_aero_convproc.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/physics/spcam/crm_physics.F90src/chemistry/aerosol/aerosol_state_mod.F90704d3d014d29c7f06615865f0409b391b36a8a4c1660952553000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove use of iulog and endrun from aerosol class code modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/chemistry/modal_aero/modal_aero_convproc.F90 modified: src/physics/cam/microp_aero.F90 modified: src/physics/cam/ndrop.F90 modified: src/physics/spcam/crm_physics.F90 2022-08-19 17:42:33 -0600704d3d014d29c7f06615865f0409b391b36a8a4cremove use of iulog and endrun from aerosol class codeeditsrc/physics/cam/ndrop.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/physics/spcam/crm_physics.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/physics/cam/microp_aero.F90editsrc/chemistry/modal_aero/modal_aero_convproc.F90doc/ChangeLog896f5cc440f40acd5d2938ec13fb0a8174ceaebd1661132808000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2022-08-21 19:46:48 -0600896f5cc440f40acd5d2938ec13fb0a8174ceaebdChangeLog updateeditdoc/ChangeLogExternals_CAM.cfg1c62132237073bf10fafe7f86c18a6d8d59dc83d1661382509000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduPoint to new pumas tag 2022-08-24 17:08:29 -06001c62132237073bf10fafe7f86c18a6d8d59dc83dPoint to new pumas tageditExternals_CAM.cfgdoc/ChangeLogcf7ead8c8579ce14327997052710213685c0c5111661461522000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduFirst pass ChangeLog 2022-08-25 15:05:22 -0600cf7ead8c8579ce14327997052710213685c0c511First pass ChangeLogeditdoc/ChangeLogsrc/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F901ef2a1193903932c09220797d0002dfe63e917701661474334000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd abstract key word modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 2022-08-25 18:38:54 -06001ef2a1193903932c09220797d0002dfe63e91770add abstract key wordeditsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90src/utils/cam_thermo.F90839eed5a01305b643893fe192bdbba776e133ed21661477112000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne3.cheyenne.ucar.edufix wrong variable used 2022-08-25 19:25:12 -0600839eed5a01305b643893fe192bdbba776e133ed2fix wrong variable usededitsrc/utils/cam_thermo.F90src/physics/cam/ndrop.F902ade0c1ef9be25520c1702ca8846420e7360cd0c1661518115000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse local tmelt value modified: src/physics/cam/ndrop.F90 2022-08-26 06:48:35 -06002ade0c1ef9be25520c1702ca8846420e7360cd0cuse local tmelt valueeditsrc/physics/cam/ndrop.F90doc/ChangeLog96547f5434d5f2a90100289fe4ba9dd750f1519b1661534755000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduFinal Changelog edits 2022-08-26 11:25:55 -060096547f5434d5f2a90100289fe4ba9dd750f1519bFinal Changelog editseditdoc/ChangeLogdoc/ChangeLogb2fa2b5f78b0a3604f8244f149c0fe3b3583c4331661554651000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne3.cheyenne.ucar.eduadd changelog 2022-08-26 16:57:31 -0600b2fa2b5f78b0a3604f8244f149c0fe3b3583c433add changelogeditdoc/ChangeLogsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90e019c6d5db80199d3b286cb601debc2a853cefdc1661653642000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurevert voltonumb formulations to restore bit-for-bit results modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 2022-08-27 20:27:22 -0600e019c6d5db80199d3b286cb601debc2a853cefdcrevert voltonumb formulations to restore bit-for-bit resultseditsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90src/physics/cam/zm_microphysics.F90a1acff52ade7a9f04b5fd89b7d281902e1eeeaf01661690112000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educonstruct local aerosol_properties obj modified: src/physics/cam/zm_microphysics.F90 2022-08-28 06:35:12 -0600a1acff52ade7a9f04b5fd89b7d281902e1eeeaf0construct local aerosol_properties objeditsrc/physics/cam/zm_microphysics.F90src/utils/cam_thermo.F90src/utils/air_composition.F90src/chemistry/mozart/upper_bc.F90d893d1a1829f2fee2e121855ef7b9a449663df541661721838000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne3.cheyenne.ucar.edufrancis review comments 2022-08-28 15:23:58 -0600d893d1a1829f2fee2e121855ef7b9a449663df54francis review commentseditsrc/utils/air_composition.F90editsrc/chemistry/mozart/upper_bc.F90editsrc/utils/cam_thermo.F90src/physics/cam/zm_microphysics.F90e4ba654c63828e0a84b48dcf4e6fdc2e5bd307af1662043184000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse aerosol_properties_object interface modified: src/physics/cam/zm_microphysics.F90 2022-09-01 08:39:44 -0600e4ba654c63828e0a84b48dcf4e6fdc2e5bd307afuse aerosol_properties_object interfaceeditsrc/physics/cam/zm_microphysics.F90doc/ChangeLog1f68838ea108453fa5f5bb57b185586a875707b61662065745000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog entry 2022-09-01 14:55:45 -06001f68838ea108453fa5f5bb57b185586a875707b6ChangeLog entryeditdoc/ChangeLogdoc/ChangeLog55bf73d290e2ec3748932d3323bd928665ae5f381662066678000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2022-09-01 15:11:18 -060055bf73d290e2ec3748932d3323bd928665ae5f38ChangeLog updateseditdoc/ChangeLogsrc/physics/cam_dev/micro_pumas_cam.F90d6244acb1c3c15caee6c80b177e41f732378d2d71662072306000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd addtional fields to PUMAS DDT 2022-09-01 16:45:06 -0600d6244acb1c3c15caee6c80b177e41f732378d2d7Add addtional fields to PUMAS DDTeditsrc/physics/cam_dev/micro_pumas_cam.F90Externals_CAM.cfg117d3d5ec25db2b9687145d58d09bb734f8c28c91662072397000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate temporary PUMAS hash 2022-09-01 16:46:37 -0600117d3d5ec25db2b9687145d58d09bb734f8c28c9Update temporary PUMAS hasheditExternals_CAM.cfgdoc/ChangeLogdae649750baf137816c57461a0b12c7ecec6f12f1662131465000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2022-09-02 09:11:05 -0600dae649750baf137816c57461a0b12c7ecec6f12fupdate ChangeLogeditdoc/ChangeLogdoc/ChangeLog4e2e0d0e752714defd642b8c72b7886778550f7d1662139913000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog tweaks 2022-09-02 11:31:53 -06004e2e0d0e752714defd642b8c72b7886778550f7dChangeLog tweakseditdoc/ChangeLogdoc/ChangeLog9f84fe5e30606baa0973ac41c9c54592bd37d9141662140570000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore tweaks to ChangeLog 2022-09-02 11:42:50 -06009f84fe5e30606baa0973ac41c9c54592bd37d914more tweaks to ChangeLogeditdoc/ChangeLogExternals.cfgsrc/dynamics/mpas/dp_coupling.F90src/control/budgets.F90src/dynamics/mpas/dyn_comp.F90f4647a8c509f765bad089effad294d7d4060bddf1662653367000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comupdates to get MPAS budgets working, next step to refactor to make consistent with se changes 2022-09-08 10:09:27 -0600f4647a8c509f765bad089effad294d7d4060bddfupdates to get MPAS budgets working, next step to refactor to make consistent with se changeseditsrc/dynamics/mpas/dp_coupling.F90editsrc/control/budgets.F90editsrc/dynamics/mpas/dyn_comp.F90editExternals.cfgsrc/control/cam_history.F90src/dynamics/se/interp_mod.F90437d2b870d9fbd2da4d2848b79ecb8e69924a3de1662656615000http://carson.math.uwm.edu/jenkins/user/nusbaumenusbaumenusbaume@ucar.eduAdd code to properly generate interpolated output with r4 reals (Github issue #644). 2022-09-08 11:03:35 -0600437d2b870d9fbd2da4d2848b79ecb8e69924a3deAdd code to properly generate interpolated output with r4 reals (Github issue #644).editsrc/dynamics/se/interp_mod.F90editsrc/control/cam_history.F90src/chemistry/mozart/hco_cc_emissions.F90461bdacc475266c6ec2f0bb2222f3ddb967c59131662747880000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comRemove extraneous debug messages for performance 2022-09-09 14:24:40 -0400461bdacc475266c6ec2f0bb2222f3ddb967c5913Remove extraneous debug messages for performanceeditsrc/chemistry/mozart/hco_cc_emissions.F90Externals_CAM.cfgsrc/physics/cam_dev/micro_pumas_cam.F90ef4157c9a6bb15d949eac2662fa40ddab13eb1401663003123000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduTest using ncol instead of psetcols for DDT allocation 2022-09-12 11:18:43 -0600ef4157c9a6bb15d949eac2662fa40ddab13eb140Test using ncol instead of psetcols for DDT allocationeditsrc/physics/cam_dev/micro_pumas_cam.F90editExternals_CAM.cfgsrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/microp_aero.F90src/physics/cam/nucleate_ice_cam.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F900295cbc7edcf0fe324f0c1c838da2f827ec6da7c1663116190000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduUse generalized aerosol interfaces in nucleate ice code modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/microp_aero.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-09-13 18:43:10 -06000295cbc7edcf0fe324f0c1c838da2f827ec6da7cUse generalized aerosol interfaces in nucleate ice codeeditsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/physics/cam/nucleate_ice_cam.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/physics/cam/microp_aero.F90src/physics/cam/nucleate_ice_cam.F907f637fe689bb5a104735d22dea2cf8cc5c8693521663158819000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove unused tolerance; some clean up modified: src/physics/cam/nucleate_ice_cam.F90 2022-09-14 06:33:39 -06007f637fe689bb5a104735d22dea2cf8cc5c869352remove unused tolerance; some clean upeditsrc/physics/cam/nucleate_ice_cam.F90src/physics/cam/nucleate_ice_cam.F900a3caa6a636a36b1d6514eba30485d9b673669fa1663209292000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurestore cam_dev code modified: src/physics/cam/nucleate_ice_cam.F90 2022-09-14 20:34:52 -06000a3caa6a636a36b1d6514eba30485d9b673669farestore cam_dev codeeditsrc/physics/cam/nucleate_ice_cam.F90src/physics/cam/physpkg.F90src/control/budgets.F90src/dynamics/mpas/dycore_budget.F90src/physics/cam/check_energy.F90src/dynamics/se/dycore_budget.F90src/physics/cam/physics_types.F90src/dynamics/mpas/dyn_comp.F9088fc6e26a7bb40eb9ab37d842adcc41b0d90125e1663230222000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comsome refactor for mpas budgets 2022-09-15 02:23:42 -060088fc6e26a7bb40eb9ab37d842adcc41b0d90125esome refactor for mpas budgetseditsrc/physics/cam/physpkg.F90editsrc/control/budgets.F90addsrc/dynamics/mpas/dycore_budget.F90addsrc/dynamics/se/dycore_budget.F90editsrc/physics/cam/physics_types.F90editsrc/physics/cam/check_energy.F90editsrc/dynamics/mpas/dyn_comp.F90src/control/budgets.F90src/dynamics/mpas/dyn_comp.F90src/physics/cam/check_energy.F904bf1777078072eb86cd9ac6b6afe3a7916661e6f1663230839000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comremove some debug printout 2022-09-15 02:33:59 -06004bf1777078072eb86cd9ac6b6afe3a7916661e6fremove some debug printouteditsrc/control/budgets.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/physics/cam/check_energy.F90src/dynamics/se/interp_mod.F90src/dynamics/se/dycore/interpolate_mod.F90f8d7147cab2b2f5ce9f209721ac813d132bb29d81663253620000http://carson.math.uwm.edu/jenkins/user/nusbaumenusbaumenusbaume@ucar.eduAdd fillvalue checks for CSLAM and non-physics grids, and perform some code clean-up. 2022-09-15 08:53:40 -0600f8d7147cab2b2f5ce9f209721ac813d132bb29d8Add fillvalue checks for CSLAM and non-physics grids, and perform some code clean-up.editsrc/dynamics/se/interp_mod.F90editsrc/dynamics/se/dycore/interpolate_mod.F90src/physics/cam/nucleate_ice_cam.F90src/chemistry/aerosol/aerosol_state_mod.F90src/chemistry/aerosol/modal_aerosol_state_mod.F9023bf3a35f31802d590109d6a6fd7d562f80ce24c1663419043000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduincapsulate num dens calc in aerosol_state; use rho in type weights modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-09-17 06:50:43 -060023bf3a35f31802d590109d6a6fd7d562f80ce24cincapsulate num dens calc in aerosol_state; use rho in type weightseditsrc/physics/cam/nucleate_ice_cam.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/nucleate_ice_cam.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90e9d5486f54ea841b4032d7b9ee22bdba31407b6b1663600519000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse assumed shape array arguments modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-09-19 09:15:19 -0600e9d5486f54ea841b4032d7b9ee22bdba31407b6buse assumed shape array argumentseditsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/physics/cam/nucleate_ice_cam.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90src/physics/cam/nucleate_ice_cam.F90389d8e709cc4d11753e5ba705bc9e906d88342a91663628389000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduUse accumulated change in number mixing ratios for updates modified: src/physics/cam/nucleate_ice_cam.F90 2022-09-19 16:59:49 -0600389d8e709cc4d11753e5ba705bc9e906d88342a9Use accumulated change in number mixing ratios for updateseditsrc/physics/cam/nucleate_ice_cam.F90src/chemistry/aerosol/aerosol_state_mod.F90b9cd3de8298184f803ca3a32c92660899cf212e51663701917000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhange order of operations in sulfate number concentrations calc to git bit-for-bit results modified: src/chemistry/aerosol/aerosol_state_mod.F90 2022-09-20 13:25:17 -0600b9cd3de8298184f803ca3a32c92660899cf212e5change order of operations in sulfate number concentrations calc to git bit-for-bit resultseditsrc/chemistry/aerosol/aerosol_state_mod.F90src/physics/cam/nucleate_ice_cam.F90src/physics/cam/microp_aero.F9053a28538c56ea1bfd140de1f42049d88aaeeefe11663715416000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduoptional args for aerosol properties and state objects modified: src/physics/cam/microp_aero.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-09-20 17:10:16 -060053a28538c56ea1bfd140de1f42049d88aaeeefe1optional args for aerosol properties and state objectseditsrc/physics/cam/nucleate_ice_cam.F90editsrc/physics/cam/microp_aero.F90src/chemistry/aerosol/modal_aerosol_state_mod.F901e79dbf7284c740a2c228dcdd3ddcb8a31aa258d1663731899000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse share code version of erf function modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 2022-09-20 21:44:59 -06001e79dbf7284c740a2c228dcdd3ddcb8a31aa258duse share code version of erf functioneditsrc/chemistry/aerosol/modal_aerosol_state_mod.F90doc/ChangeLogsrc/physics/cam/nucleate_ice_cam.F90src/physics/cam/microp_aero.F909407070f80ee84994d9d2551853fa52f444344971663790646000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitial ChangeLog entries; some cleanup modified: doc/ChangeLog modified: src/physics/cam/microp_aero.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-09-21 14:04:06 -06009407070f80ee84994d9d2551853fa52f44434497initial ChangeLog entries; some cleanupeditdoc/ChangeLogeditsrc/physics/cam/microp_aero.F90editsrc/physics/cam/nucleate_ice_cam.F90src/physics/cam_dev/micro_pumas_cam.F904e7ddf9027b88d3e6658bb90799a92822f56f5351663962316000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMods for using ncol dimension and WACCM bug fixes 2022-09-23 13:45:16 -06004e7ddf9027b88d3e6658bb90799a92822f56f535Mods for using ncol dimension and WACCM bug fixeseditsrc/physics/cam_dev/micro_pumas_cam.F90src/dynamics/se/interp_mod.F907d96ded6650479cf77ca6c9078475c3dabd9e7ab1663967706000http://carson.math.uwm.edu/jenkins/user/nusbaumenusbaumenusbaume@ucar.eduMove location of fillvalue checks to catch extended panel values as well. 2022-09-23 15:15:06 -06007d96ded6650479cf77ca6c9078475c3dabd9e7abMove location of fillvalue checks to catch extended panel values as well.editsrc/dynamics/se/interp_mod.F90src/physics/camrt/radiation.F90src/physics/rrtmg/radiation.F90196f03932df984f334578133da6a4e45f092c4651664214628000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comMaking nextsw_cday a double type rather than integer to fix cam_dev restart bug. 2022-09-26 11:50:28 -0600196f03932df984f334578133da6a4e45f092c465Making nextsw_cday a double type rather than integer to fix cam_dev restart bug.editsrc/physics/rrtmg/radiation.F90editsrc/physics/camrt/radiation.F90cime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/user_nl_cplbld/namelist_files/namelist_definition.xmlcime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/user_nl_camsrc/physics/cam/zonal_mean.F90src/physics/cam/zonal_mean_mod.F90cime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/user_nl_cplcime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/user_nl_camsrc/physics/cam/nudging.F90901c3d31cdbff04a43d5d42ee10a4320c202f1fa1664217461000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement nudging zonal mean filtering options; rename zonal_mean module as zonal_mean_mod modified: bld/namelist_files/namelist_definition.xml modified: src/physics/cam/nudging.F90 modified: src/physics/cam/zonal_mean_mod.F90 renamed: src/physics/cam/zonal_mean.F90 -> src/physics/cam/zonal_mean_mod.F90 new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/user_nl_cpl new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/user_nl_cpl 2022-09-26 12:37:41 -0600901c3d31cdbff04a43d5d42ee10a4320c202f1faimplement nudging zonal mean filtering options; rename zonal_mean module as zonal_mean_modaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/user_nl_cpleditsrc/physics/cam/nudging.F90addcime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/user_nl_cpladdcime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_f10_L26/user_nl_camaddsrc/physics/cam/zonal_mean_mod.F90editbld/namelist_files/namelist_definition.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_nudging_ne5_L26/shell_commandsdeletesrc/physics/cam/zonal_mean.F90src/control/cam_history_support.F905dc09634e3d0d177916c419930966f8a4e50cada1664342139000http://carson.math.uwm.edu/jenkins/user/goldygoldygoldy@ucar.eduAdd interface for collecting history dimension values 2022-09-27 23:15:39 -06005dc09634e3d0d177916c419930966f8a4e50cadaAdd interface for collecting history dimension valueseditsrc/control/cam_history_support.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_nln_matrix.F90cime_config/testdefs/testlist_cam.xmlcime_config/config_component.xmlbld/configuresrc/chemistry/pp_trop_strat_mam5_vbs/mo_setrxt.F90cime_config/config_compsets.xmlbld/config_files/definition.xmlsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_factor.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_exp_sol.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_indprd.F90src/chemistry/pp_trop_strat_mam5_vbs/m_rxt_id.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/pp_trop_strat_mam5_vbs/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.insrc/chemistry/pp_trop_strat_mam5_vbs/m_spc_id.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam5_vbs/chem_mods.F90bld/build-namelistsrc/chemistry/pp_trop_strat_mam5_vbs/mo_adjrxt.F90src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.docsrc/chemistry/pp_trop_strat_mam5_vbs/mo_phtadj.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_imp_sol.F90bld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/pp_trop_strat_mam5_vbs/mo_rxt_rates_conv.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_lin_matrix.F90b5a7b0a3236f23807200532a8b6dda59da67cfe11664378608000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement camchem-mam5 compsets -- FC2000mam5, FCHISTmam5 modified: bld/build-namelist modified: bld/config_files/definition.xml modified: bld/configure modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml modified: cime_config/config_component.xml modified: cime_config/config_compsets.xml modified: cime_config/testdefs/testlist_cam.xml new file: src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.doc new file: src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.in new file: src/chemistry/pp_trop_strat_mam5_vbs/chem_mods.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/m_rxt_id.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/m_spc_id.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_adjrxt.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_exp_sol.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_imp_sol.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_indprd.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_lin_matrix.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_lu_factor.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_lu_solve.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_nln_matrix.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_phtadj.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_prod_loss.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_rxt_rates_conv.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_setrxt.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_sim_dat.F90 2022-09-28 09:23:28 -0600b5a7b0a3236f23807200532a8b6dda59da67cfe1implement camchem-mam5 compsets -- FC2000mam5, FCHISTmam5addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_adjrxt.F90editcime_config/config_compsets.xmleditcime_config/config_component.xmleditbld/namelist_files/namelist_definition.xmladdsrc/chemistry/pp_trop_strat_mam5_vbs/mo_sim_dat.F90editbld/namelist_files/namelist_defaults_cam.xmladdsrc/chemistry/pp_trop_strat_mam5_vbs/mo_exp_sol.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_indprd.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/m_rxt_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mech.inaddsrc/chemistry/pp_trop_strat_mam5_vbs/mo_setrxt.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lin_matrix.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/m_spc_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_rxt_rates_conv.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_factor.F90editbld/configureaddsrc/chemistry/pp_trop_strat_mam5_vbs/mo_nln_matrix.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_phtadj.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mech.docaddsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_solve.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mods.F90editbld/build-namelisteditcime_config/testdefs/testlist_cam.xmladdsrc/chemistry/pp_trop_strat_mam5_vbs/mo_imp_sol.F90editbld/config_files/definition.xmladdsrc/chemistry/pp_trop_strat_mam5_vbs/mo_prod_loss.F90doc/ChangeLogb148c3dfeb5cba1a7368f25d778e92de901b4bff1664401919000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_078 2022-09-28 15:51:59 -0600b148c3dfeb5cba1a7368f25d778e92de901b4bffUpdate ChangeLog for cam6_3_078editdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xml3f1225f22748772208075c88a183365447864ab81664462156000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhange physprops inputs for MAM4 (coarse mode) modified: bld/namelist_files/namelist_defaults_cam.xml 2022-09-29 08:35:56 -06003f1225f22748772208075c88a183365447864ab8change physprops inputs for MAM4 (coarse mode)editbld/namelist_files/namelist_defaults_cam.xmlExternals.cfg845fecae778db997eeb4130c9b447449612c92951664467262000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate externals to get fixes 2022-09-29 10:01:02 -0600845fecae778db997eeb4130c9b447449612c9295Update externals to get fixeseditExternals.cfgsrc/physics/cam/zonal_mean_mod.F907ce6ab18b976a441f8f4c3b51f07e30ccfcb363e1664558118000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufixes for bit-for-bit reproducible results wrt changing number of MPI tasks; misc cleanup modified: src/physics/cam/zonal_mean_mod.F90 2022-09-30 11:15:18 -06007ce6ab18b976a441f8f4c3b51f07e30ccfcb363efixes for bit-for-bit reproducible results wrt changing number of MPI tasks; misc cleanupeditsrc/physics/cam/zonal_mean_mod.F90cime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/user_nl_cplcime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/shell_commandscime_config/testdefs/testlist_cam.xml247bd4531781ceedb3735abc35d27da432bc88181664835214000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd cheyenne regression tests modified: cime_config/testdefs/testlist_cam.xml new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/user_nl_cpl 2022-10-03 16:13:34 -0600247bd4531781ceedb3735abc35d27da432bc8818add cheyenne regression testsaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/shell_commandseditcime_config/testdefs/testlist_cam.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/user_nl_cpladdcime_config/testdefs/testmods_dirs/cam/outfrq3s_zmean_nudging/user_nl_camsrc/control/cam_history_support.F90src/physics/cam_dev/micro_pumas_cam.F90b527a7c17a7dc42a338b74c19238138ca2d889241664838629000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduZero out more fields and add writing of trop_cld_lev values to file 2022-10-03 17:10:29 -0600b527a7c17a7dc42a338b74c19238138ca2d88924Zero out more fields and add writing of trop_cld_lev values to fileeditsrc/control/cam_history_support.F90editsrc/physics/cam_dev/micro_pumas_cam.F90cime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_defaults_cam.xmle28e0394ac0fab287e645eb0383d66739c8c93701664904781000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhanges for running FHIST on refinded SE grids modified: bld/namelist_files/namelist_defaults_cam.xml modified: cime_config/testdefs/testlist_cam.xml 2022-10-04 11:33:01 -0600e28e0394ac0fab287e645eb0383d66739c8c9370changes for running FHIST on refinded SE gridseditcime_config/testdefs/testlist_cam.xmleditbld/namelist_files/namelist_defaults_cam.xmlExternals.cfg178544a238ec652b7a559ac0baad8e799396e9511664983118000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ccs_config 2022-10-05 09:18:38 -0600178544a238ec652b7a559ac0baad8e799396e951Update ccs_configeditExternals.cfgcime_config/testdefs/testlist_cam.xml55345e8650d320fdca730f453d1260bf12a49a081664988805000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhange catagories on the CAM refined grid tests 2022-10-05 10:53:25 -060055345e8650d320fdca730f453d1260bf12a49a08change catagories on the CAM refined grid testseditcime_config/testdefs/testlist_cam.xmlsrc/utils/zonal_mean_mod.F90src/physics/cam/zonal_mean_mod.F90768efbb476e2a84e785d8ada45313c70b781989c1665014719000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduable to operate on fields with arbitrary number of levels; clean up; move to src/utils renamed: src/physics/cam/zonal_mean_mod.F90 -> src/utils/zonal_mean_mod.F90 modified: src/physics/cam/zonal_mean_mod.F90 2022-10-05 18:05:19 -0600768efbb476e2a84e785d8ada45313c70b781989cable to operate on fields with arbitrary number of levels; clean up; move to src/utilsaddsrc/utils/zonal_mean_mod.F90deletesrc/physics/cam/zonal_mean_mod.F90src/dynamics/se/dycore_budget.F90src/control/budgets.F90src/dynamics/se/dyn_comp.F90src/dynamics/se/dycore/prim_advance_mod.F90src/physics/cam/check_energy.F90b3b97aaca7f7bb0c3e5c06d0619464d42c8a19ad1665097354000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.commass fixes for se dycore 2022-10-06 17:02:34 -0600b3b97aaca7f7bb0c3e5c06d0619464d42c8a19admass fixes for se dycoreeditsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/control/budgets.F90editsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/se/dyn_comp.F90editsrc/physics/cam/check_energy.F90src/cpl/nuopc/atm_comp_nuopc.F9014f032ccdf7591f7b81048767ba100115e62af081665111770000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.edufixes for dae test 2022-10-06 21:02:50 -060014f032ccdf7591f7b81048767ba100115e62af08fixes for dae testeditsrc/cpl/nuopc/atm_comp_nuopc.F90src/physics/camrt/radiation.F90src/physics/rrtmg/radiation.F902ddf217b6defb354f60987dbc2351cbf35079f151665168913000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix problem with protected variable nextsw_cday 2022-10-07 12:55:13 -06002ddf217b6defb354f60987dbc2351cbf35079f15Fix problem with protected variable nextsw_cdayeditsrc/physics/camrt/radiation.F90editsrc/physics/rrtmg/radiation.F90src/physics/cam/boundarydata.F9019bd19b5f92bf9c424fdb4ca2573005d5f6dea081665415257000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix bug in boundarydata initial read modified: src/physics/cam/boundarydata.F90 2022-10-10 09:20:57 -060019bd19b5f92bf9c424fdb4ca2573005d5f6dea08fix bug in boundarydata initial readeditsrc/physics/cam/boundarydata.F90cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/user_nl_camcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/shell_commands611ff791db9fda5aad5b64dde1d77e612969cc5d1665420581000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd waccmsc test starting 14 Dec modified: cime_config/testdefs/testlist_cam.xml new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/user_nl_clm 2022-10-10 10:49:41 -0600611ff791db9fda5aad5b64dde1d77e612969cc5dadd waccmsc test starting 14 Decaddcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/user_nl_clmeditcime_config/testdefs/testlist_cam.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec/shell_commandsExternals_CAM.cfg0f066d400310a307e2cf04aff5b609111d44119d1665436872000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate hash for pumas 2022-10-10 15:21:12 -06000f066d400310a307e2cf04aff5b609111d44119dUpdate hash for pumaseditExternals_CAM.cfgcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/shell_commandscime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_clm499daaa3db0c8ced74d40b40305ae2401ac7c3a81665512785000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd cam_dev phys with waccm-sc chem test starting 14 Dec modified: cime_config/testdefs/testlist_cam.xml new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_clm 2022-10-11 12:26:25 -0600499daaa3db0c8ced74d40b40305ae2401ac7c3a8add cam_dev phys with waccm-sc chem test starting 14 Decaddcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/shell_commandseditcime_config/testdefs/testlist_cam.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_camExternals_CAM.cfgbb598baf6ca6984d7fd5bf190e18b70dd061c16a1665524875000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduBring in official PUMAS tag 2022-10-11 15:47:55 -0600bb598baf6ca6984d7fd5bf190e18b70dd061c16aBring in official PUMAS tageditExternals_CAM.cfgcime_config/testdefs/testlist_cam.xml453d8d3d32c93e8ba973a6374709ba28554595ae1665525195000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove problematic MCT tests 2022-10-11 15:53:15 -0600453d8d3d32c93e8ba973a6374709ba28554595aeRemove problematic MCT testseditcime_config/testdefs/testlist_cam.xmlsrc/cpl/nuopc/atm_comp_nuopc.F90e4edb4ee103fc3be8bc8b4d87e78b844f6205fa31665606952000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.edugeneralized reading of attribute so that it does not depend on cmeps PR 2022-10-12 14:35:52 -0600e4edb4ee103fc3be8bc8b4d87e78b844f6205fa3generalized reading of attribute so that it does not depend on cmeps PReditsrc/cpl/nuopc/atm_comp_nuopc.F90cime_config/testdefs/testlist_cam.xml35d362c80695fb6ebc2f773e5f71f06cef0264081665759652000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduIncrease time for a regression test 2022-10-14 09:00:52 -060035d362c80695fb6ebc2f773e5f71f06cef026408Increase time for a regression testeditcime_config/testdefs/testlist_cam.xmldoc/ChangeLog45e1b52c74db762328bd927259e0e957167020641665759837000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_079 2022-10-14 09:03:57 -060045e1b52c74db762328bd927259e0e95716702064Update ChangeLog for cam6_3_079editdoc/ChangeLogsrc/physics/waccm/nlte_aliarms.F90src/physics/waccm/radheat.F90c83b8813972a29667000fae51cf6ed1ae13b00001665766378000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix final reviewer comments and updated location for mbarv 2022-10-14 10:52:58 -0600c83b8813972a29667000fae51cf6ed1ae13b0000Fix final reviewer comments and updated location for mbarveditsrc/physics/waccm/nlte_aliarms.F90editsrc/physics/waccm/radheat.F90doc/ChangeLog3a8f024da902d7d65a0328d6feec3f08aa6cbcd91665782538000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduChangeLog updates for cam6_3_080 2022-10-14 15:22:18 -06003a8f024da902d7d65a0328d6feec3f08aa6cbcd9ChangeLog updates for cam6_3_080editdoc/ChangeLogsrc/control/runtime_opts.F90src/control/cam_comp.F90src/physics/cam/physpkg.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_camsrc/physics/cam/phys_grid_ctem.F90bld/namelist_files/namelist_definition.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_clmsrc/utils/zonal_mean_mod.F908e12246002c156b94b8e910d881db6dae1676db41666046011000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitial implementation of physics grid TEM diagnostics new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_clm new file: src/physics/cam/phys_grid_ctem.F90 new file: src/utils/zonal_mean_mod.F90 modified: bld/namelist_files/namelist_definition.xml modified: src/control/cam_comp.F90 modified: src/control/runtime_opts.F90 modified: src/physics/cam/physpkg.F90 2022-10-17 16:33:31 -06008e12246002c156b94b8e910d881db6dae1676db4initial implementation of physics grid TEM diagnosticseditsrc/control/cam_comp.F90editsrc/physics/cam/physpkg.F90addcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_cameditbld/namelist_files/namelist_definition.xmladdsrc/utils/zonal_mean_mod.F90addsrc/physics/cam/phys_grid_ctem.F90editsrc/control/runtime_opts.F90src/physics/cam/phys_grid_ctem.F90f059e4e801f9cc9032884e1dabd12f44eb7570e81666050702000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd conditionals for doing the TEM daigs modified: src/physics/cam/phys_grid_ctem.F90 2022-10-17 17:51:42 -0600f059e4e801f9cc9032884e1dabd12f44eb7570e8add conditionals for doing the TEM daigseditsrc/physics/cam/phys_grid_ctem.F90src/physics/cam/nucleate_ice_cam.F90src/chemistry/aerosol/aerosol_state_mod.F90src/chemistry/aerosol/modal_aerosol_state_mod.F909f81bc52fb06229221bfb10d85cf68cd7f7399c61666123460000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement aerosol state update_bin method; remove incomplete get_*total_mmr methods modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-10-18 14:04:20 -06009f81bc52fb06229221bfb10d85cf68cd7f7399c6implement aerosol state update_bin method; remove incomplete get_*total_mmr methodseditsrc/physics/cam/nucleate_ice_cam.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/microp_aero.F90060a2cb8058d9e9d0e16d343de17c1d21b1272771666124165000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumove nucleate_ice_cam_init calls to the respective if/else sections modified: src/physics/cam/microp_aero.F90 2022-10-18 14:16:05 -0600060a2cb8058d9e9d0e16d343de17c1d21b127277move nucleate_ice_cam_init calls to the respective if/else sectionseditsrc/physics/cam/microp_aero.F90bld/namelist_files/namelist_definition.xmlsrc/utils/zonal_mean_mod.F90e5a2cba03deb8ec25526074c6f3aa36d0716084f1666128949000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimprove namelist options descriptions; check presense of GEN_GAUSSLATS option before use modified: bld/namelist_files/namelist_definition.xml modified: src/utils/zonal_mean_mod.F90 2022-10-18 15:35:49 -0600e5a2cba03deb8ec25526074c6f3aa36d0716084fimprove namelist options descriptions; check presense of GEN_GAUSSLATS option before useeditbld/namelist_files/namelist_definition.xmleditsrc/utils/zonal_mean_mod.F90src/cpl/nuopc/atm_comp_nuopc.F907407a69bf5d1c59314f6dba4d24400092538aa701666194120000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate src/cpl/nuopc/atm_comp_nuopc.F90 2022-10-19 09:42:00 -06007407a69bf5d1c59314f6dba4d24400092538aa70Update src/cpl/nuopc/atm_comp_nuopc.F90editsrc/cpl/nuopc/atm_comp_nuopc.F90src/dynamics/mpas/dp_coupling.F90src/dynamics/se/dyn_comp.F90src/control/budgets.F90src/dynamics/mpas/dycore_budget.F90src/physics/cam/check_energy.F90src/dynamics/se/dycore_budget.F90src/dynamics/se/dycore/prim_advance_mod.F901c287e004c582fde161b1033d4abc013b01f910a1666206917000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduNAG fixes for budgeting 2022-10-19 13:15:17 -06001c287e004c582fde161b1033d4abc013b01f910aNAG fixes for budgetingeditsrc/physics/cam/check_energy.F90editsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/se/dyn_comp.F90editsrc/control/budgets.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/dynamics/mpas/dp_coupling.F90bld/namelist_files/namelist_definition.xmlea4a3fddf7a83043559e1db51a3e711666aa49941666207201000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimprove Nudge_ZonalFilter namelist options description modified: bld/namelist_files/namelist_definition.xml 2022-10-19 13:20:01 -0600ea4a3fddf7a83043559e1db51a3e711666aa4994improve Nudge_ZonalFilter namelist options descriptioneditbld/namelist_files/namelist_definition.xmlsrc/physics/cam/physpkg.F90src/physics/cam/phys_grid_ctem.F907683d547f7764093dea1a0ed0185e722bb08c32d1666221751000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educalculate scale height; add comments modified: src/physics/cam/phys_grid_ctem.F90 modified: src/physics/cam/physpkg.F90 2022-10-19 17:22:31 -06007683d547f7764093dea1a0ed0185e722bb08c32dcalculate scale height; add commentseditsrc/physics/cam/phys_grid_ctem.F90editsrc/physics/cam/physpkg.F90src/physics/cam_dev/physpkg.F90src/dynamics/se/dycore_budget.F90src/control/budgets.F90src/physics/cam/physpkg.F9057dce85bc4cd9b5ca42c59123cbdffe8a9309aaa1666226154000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduupdates for cam_dev and some cleanup from nag bldlog warnings 2022-10-19 18:35:54 -060057dce85bc4cd9b5ca42c59123cbdffe8a9309aaaupdates for cam_dev and some cleanup from nag bldlog warningseditsrc/control/budgets.F90editsrc/physics/cam_dev/physpkg.F90editsrc/dynamics/se/dycore_budget.F90editsrc/physics/cam/physpkg.F90src/physics/cam/phys_grid_ctem.F90706ede398b7c21ccaa7c8deec4cce09fd938511d1666279967000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix bug in do_tem_diags setting modified: src/physics/cam/phys_grid_ctem.F90 2022-10-20 09:32:47 -0600706ede398b7c21ccaa7c8deec4cce09fd938511dfix bug in do_tem_diags settingeditsrc/physics/cam/phys_grid_ctem.F90src/dynamics/mpas/dyn_comp.F90b29223928f11705404cd3185f5e6842a127832a31666283537000http://carson.math.uwm.edu/jenkins/user/peter.hjort.lauritzenpeter.hjort.lauritzenpeter.hjort.lauritzen@gmail.comfix NAG issue with strings 2022-10-20 10:32:17 -0600b29223928f11705404cd3185f5e6842a127832a3fix NAG issue with stringseditsrc/dynamics/mpas/dyn_comp.F90src/dynamics/se/dycore_budget.F90b93dd39c6b5721825f7521376a35616914e1f2201666283558000http://carson.math.uwm.edu/jenkins/user/peter.hjort.lauritzenpeter.hjort.lauritzenpeter.hjort.lauritzen@gmail.commodify text for logfile 2022-10-20 10:32:38 -0600b93dd39c6b5721825f7521376a35616914e1f220modify text for logfileeditsrc/dynamics/se/dycore_budget.F90src/physics/cam/physpkg.F90src/physics/cam_dev/physpkg.F90src/dynamics/se/dycore_budget.F9062751baab06fa21b2df52c3400bb92d14b706d221666304225000http://carson.math.uwm.edu/jenkins/user/peter.hjort.lauritzenpeter.hjort.lauritzenpeter.hjort.lauritzen@gmail.commods to log file messages and remove unused energy difference 2022-10-20 16:17:05 -060062751baab06fa21b2df52c3400bb92d14b706d22mods to log file messages and remove unused energy differenceeditsrc/physics/cam_dev/physpkg.F90editsrc/dynamics/se/dycore_budget.F90editsrc/physics/cam/physpkg.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/nucleate_ice_cam.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90430a614ce155010786bef6a8980220c0b170e1db1666305905000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduJesse's suggestions -- correct typos, code cleanup, etc. modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-10-20 16:45:05 -0600430a614ce155010786bef6a8980220c0b170e1dbJesse's suggestions -- correct typos, code cleanup, etc.editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/physics/cam/nucleate_ice_cam.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/dynamics/mpas/dp_coupling.F90src/physics/cam/check_energy.F90b23a1ae982cc49783904a1d8fa543ea4cb8b05f91666307963000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.edufix get_info interface and some NAG cleanup 2022-10-20 17:19:23 -0600b23a1ae982cc49783904a1d8fa543ea4cb8b05f9fix get_info interface and some NAG cleanupeditsrc/physics/cam/check_energy.F90editsrc/dynamics/mpas/dp_coupling.F90src/dynamics/mpas/dyn_comp.F90f4a224a44eeee9c7b36d470239cf8187dca0edfd1666365607000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.edubug fix for cam6_3_080 merge 2022-10-21 09:20:07 -0600f4a224a44eeee9c7b36d470239cf8187dca0edfdbug fix for cam6_3_080 mergeeditsrc/dynamics/mpas/dyn_comp.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/hco_cc_emissions.F90src/control/cam_comp.F90src/chemistry/mozart/mo_setext.F90src/chemistry/mozart/mo_srf_emissions.F90edd0f4d03f3dcd03227124145339f7a785e5a2d91666368148000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFurther updates to HEMCO-CESM interface in response to comments: - Changed C-preprocessor constants to positively match HEMCO_CESM - Fixed tabs indendation to spaces for consistency - Removed unnecessary HEMCO_CESM check in mo_srf_emissions.F90 - now same file as upstream - Added phase= dummy argument call for HCOI_Chunk_Run. 2022-10-21 12:02:28 -0400edd0f4d03f3dcd03227124145339f7a785e5a2d9Further updates to HEMCO-CESM interface in response to comments:editsrc/control/cam_comp.F90editsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_setext.F90editsrc/chemistry/mozart/hco_cc_emissions.F90editsrc/chemistry/mozart/mo_srf_emissions.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/mo_gas_phase_chemdr.F90dde1b793cb97107aaf821c850ca2c37f6c8a67d31666368671000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate based on feedback. Now checks for rxt of jno2 and jo3_b before allocating and updating pbuf fields for safety. 2022-10-21 12:11:11 -0400dde1b793cb97107aaf821c850ca2c37f6c8a67d3Update based on feedback. Now checks for rxt of jno2 and jo3_b before allocatingeditsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_gas_phase_chemdr.F90src/dynamics/mpas/dp_coupling.F90src/dynamics/se/dyn_comp.F90src/utils/cam_thermo.F90src/dynamics/se/dycore/prim_advance_mod.F900c9375fd51951388f6ef42a2eeadba3bf80d4f9b1666382726000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.combug fix for cam_thermo 2022-10-21 14:05:26 -06000c9375fd51951388f6ef42a2eeadba3bf80d4f9bbug fix for cam_thermoeditsrc/dynamics/mpas/dp_coupling.F90editsrc/dynamics/se/dyn_comp.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90src/utils/cam_thermo.F90f69fbacf5ec9725684cee42073ea6cc7e5669a9a1666389497000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comcorrect fix for cam_thermo 2022-10-21 15:58:17 -0600f69fbacf5ec9725684cee42073ea6cc7e5669a9acorrect fix for cam_thermoeditsrc/utils/cam_thermo.F90src/physics/cam/physpkg.F904c6efeebab7921139dbf8cc078c4b65d86da466e1666395196000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadded budget for phAP-phBF in physpkg to fix error with budget_print 2022-10-21 17:33:16 -06004c6efeebab7921139dbf8cc078c4b65d86da466eadded budget for phAP-phBF in physpkg to fix error with budget_printeditsrc/physics/cam/physpkg.F90src/cpl/nuopc/atm_comp_nuopc.F90f3edd5e40c8e3c269d748bc89ba924646a2b3b2b1666651347000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.combug fix for comparing internal/external grids 2022-10-24 16:42:27 -0600f3edd5e40c8e3c269d748bc89ba924646a2b3b2bbug fix for comparing internal/external gridseditsrc/cpl/nuopc/atm_comp_nuopc.F90bld/namelist_files/namelist_defaults_cam.xml295a97455a20b751f44d1c32896698464c1bc24e1666652408000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurestrict the MAM4 coarse mode size changes to cam_dev physics modified: bld/namelist_files/namelist_defaults_cam.xml 2022-10-24 17:00:08 -0600295a97455a20b751f44d1c32896698464c1bc24erestrict the MAM4 coarse mode size changes to cam_dev physicseditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlcd401075ee5cf695eed0a83093a7abd67885bd7c1666657539000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comupdate default ic for aquaplanet to notopo 2022-10-24 18:25:39 -0600cd401075ee5cf695eed0a83093a7abd67885bd7cupdate default ic for aquaplanet to notopoeditbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/nucleate_ice_cam.F90src/chemistry/aerosol/aerosol_state_mod.F90912c05ba7333f82523cd6f7d4fe1085bb78db0481666724675000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduMore of Jesse's suggestions -- correct typos, code cleanup, etc. modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-10-25 13:04:35 -0600912c05ba7333f82523cd6f7d4fe1085bb78db048More of Jesse's suggestions -- correct typos, code cleanup, etc.editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/physics/cam/nucleate_ice_cam.F90src/utils/cam_thermo.F903b7a272e1bb0be27d201d689c6fdb8d7c71f7c0c1666734278000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.educam_thermo fix 2022-10-25 15:44:38 -06003b7a272e1bb0be27d201d689c6fdb8d7c71f7c0ccam_thermo fixeditsrc/utils/cam_thermo.F90src/physics/cam/convect_shallow.F906759ed7394fd59a29cc430fd97e052708a5543961666735001000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduremove addfld call 2022-10-25 15:56:41 -06006759ed7394fd59a29cc430fd97e052708a554396remove addfld calleditsrc/physics/cam/convect_shallow.F90cime_config/testdefs/testlist_cam.xmlaf9b45b82eef29aaeb26c60271d907d38fabea5e1666736002000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd descriptors to new reg tests modified: cime_config/testdefs/testlist_cam.xml 2022-10-25 16:13:22 -0600af9b45b82eef29aaeb26c60271d907d38fabea5eadd descriptors to new reg testseditcime_config/testdefs/testlist_cam.xmlsrc/chemistry/aerosol/aerosol_state_mod.F90b03c773656fcf6ac528c19848fb6e8e0da27611c1666739241000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduRevert treatment of stratospheric sulfates which are a special case modified: src/chemistry/aerosol/aerosol_state_mod.F90 2022-10-25 17:07:21 -0600b03c773656fcf6ac528c19848fb6e8e0da27611cRevert treatment of stratospheric sulfates which are a special caseeditsrc/chemistry/aerosol/aerosol_state_mod.F90doc/ChangeLog0023d7f83b1387e09aa5e0f7cb0667b02a6bd4ef1666739244000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduinitial changelog 2022-10-25 17:07:24 -06000023d7f83b1387e09aa5e0f7cb0667b02a6bd4efinitial changelogeditdoc/ChangeLogdoc/ChangeLoga9bedb87b7a7e59c3d1a70ecdf368bcf3df208c51666740475000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.educhangelog fixes 2022-10-25 17:27:55 -0600a9bedb87b7a7e59c3d1a70ecdf368bcf3df208c5changelog fixeseditdoc/ChangeLogsrc/physics/cam/clubb_intr.F90f18f6d1b00329d1290726d3f614e145f206d87bf1666808306000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdded l_enable_relaxed_clipping to the CAM-CLUBB code. 2022-10-26 12:18:26 -0600f18f6d1b00329d1290726d3f614e145f206d87bfAdded l_enable_relaxed_clipping to the CAM-CLUBB code.editsrc/physics/cam/clubb_intr.F90src/utils/cam_thermo.F90src/physics/cam_dev/physpkg.F90dc5e9e1a062d69d255a020aac966389bc33c1d521666815542000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comupdate cam_dev with required budget_add call for logging energy budgets 2022-10-26 14:19:02 -0600dc5e9e1a062d69d255a020aac966389bc33c1d52update cam_dev with required budget_add call for logging energy budgetseditsrc/utils/cam_thermo.F90editsrc/physics/cam_dev/physpkg.F90src/physics/cam/clubb_intr.F901f591991ea10a192647de43b42fc27cdc434d5f31666817254000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduI added CLUBB's new tunable parameter a3_coef_min to the CAM-CLUBB code. 2022-10-26 14:47:34 -06001f591991ea10a192647de43b42fc27cdc434d5f3I added CLUBB's new tunable parameter a3_coef_min to the CAM-CLUBB code.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90afedd79a8d57c68e5e8707269cb976e15ced4da31666817382000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdating the call to setup_clubb_core_api in accordance with new CLUBB changes in CLUBB revision d0c9b34. 2022-10-26 14:49:42 -0600afedd79a8d57c68e5e8707269cb976e15ced4da3Updating the call to setup_clubb_core_api in accordance with neweditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90b9518e7a817df9086c2be8a2f348475ff3a199091666817813000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdded code to interface with the latest version of CLUBB. 2022-10-26 14:56:53 -0600b9518e7a817df9086c2be8a2f348475ff3a19909Added code to interface with the latest version of CLUBB.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90384572e311cb2b7a7f45689bab342bfd983a76a61666818248000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdding _pert arrays to other advance_clubb_core call. 2022-10-26 15:04:08 -0600384572e311cb2b7a7f45689bab342bfd983a76a6Adding _pert arrays to other advance_clubb_core call.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90fd83f8640a9a3a2812d761af011fb79c4988463a1666818368000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduMaking compatible with latest clubb change. 2022-10-26 15:06:08 -0600fd83f8640a9a3a2812d761af011fb79c4988463aMaking compatible with latest clubb change.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F9017aba61dbe3ba12337fda092e8869aecaf47ecd81666820739000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduMaking compatible with latest clubb change. 2022-10-26 15:45:39 -060017aba61dbe3ba12337fda092e8869aecaf47ecd8Making compatible with latest clubb change.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90eb8b006a3cb5bf62a152b7a8ff293fbb2043aaa41666821810000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduNow using 2D versions of setup_grid and setup_parameters 2022-10-26 16:03:30 -0600eb8b006a3cb5bf62a152b7a8ff293fbb2043aaa4Now using 2D versions of setup_grid and setup_parameterseditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F9006662c0310f98efac1be371cfa74a33d4e1896881666822432000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduMaking compatible with latest clubb change. 2022-10-26 16:13:52 -060006662c0310f98efac1be371cfa74a33d4e189688Making compatible with latest clubb change.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90908263dcaf140853c60b2558a1c58d2a0dad924e1666823727000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduMaking compatible with latest clubb change. 2022-10-26 16:35:27 -0600908263dcaf140853c60b2558a1c58d2a0dad924eMaking compatible with latest clubb change.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90src/physics/cam/subcol_SILHS.F90bbbb300c70690dd952f8cdeee983f9fe8ba0622e1666823922000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduMaking compatible with latest clubb change. update_xp2_mc will be broken by this, but all we need to do to fix it is push the column loop into it. 2022-10-26 16:38:42 -0600bbbb300c70690dd952f8cdeee983f9fe8ba0622eMaking compatible with latest clubb change. update_xp2_mc will be broken by this, but all we need to do to fix it is push the column loop into it.editsrc/physics/cam/subcol_SILHS.F90editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F902f33874cc4386126fc1cbed4d16fe45090f52ffa1666823972000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduMaking use of new 2D call to update_xp2_mc 2022-10-26 16:39:32 -06002f33874cc4386126fc1cbed4d16fe45090f52ffaMaking use of new 2D call to update_xp2_mceditsrc/physics/cam/clubb_intr.F90src/dynamics/se/dyn_comp.F90src/dynamics/se/dp_coupling.F90a9b449a688043aa7125d78d729928740b9c17bd81666897222000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edumove dBF energy call from dyn_comp to dp_coupling 2022-10-27 13:00:22 -0600a9b449a688043aa7125d78d729928740b9c17bd8move dBF energy call from dyn_comp to dp_couplingeditsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/se/dp_coupling.F90src/dynamics/se/dycore_budget.F90f751ff6b06134d0aef503db86c109d671e7b38f91666897222000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduinitial clean-up of energy diags for log file 2022-10-27 13:00:22 -0600f751ff6b06134d0aef503db86c109d671e7b38f9initial clean-up of energy diags for log fileeditsrc/dynamics/se/dycore_budget.F90doc/ChangeLog9db11727315b5b3ed5861c6bceb0bc9191bb14791666901139000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.educhangelog updates 2022-10-27 14:05:39 -06009db11727315b5b3ed5861c6bceb0bc9191bb1479changelog updateseditdoc/ChangeLogsrc/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/hetfrz_classnuc.F903e8bb7c8310c91411f51090aae1639ac4fdbd4f31666969398000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitial refactor of het frz code -- generalize modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-10-28 09:03:18 -06003e8bb7c8310c91411f51090aae1639ac4fdbd4f3initial refactor of het frz code -- generalizeeditsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc.F90bddab364d4e0c282996515bb1b1ecc2516c9fbae1666974666000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurefactor round 2 modified: src/physics/cam/hetfrz_classnuc.F90 2022-10-28 10:31:06 -0600bddab364d4e0c282996515bb1b1ecc2516c9fbaerefactor round 2editsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc.F904753d65aa30bdef2ff3a6cc14c5093676016e4af1666977278000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrection to Jcnt modified: src/physics/cam/hetfrz_classnuc.F90 2022-10-28 11:14:38 -06004753d65aa30bdef2ff3a6cc14c5093676016e4afcorrection to Jcnteditsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc.F9046d0de551b66292276e3e46450a8ce8f7b66a6ae1666988009000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educollkernel operatate on collection of aerosol bins modified: src/physics/cam/hetfrz_classnuc.F90 2022-10-28 14:13:29 -060046d0de551b66292276e3e46450a8ce8f7b66a6aecollkernel operatate on collection of aerosol binseditsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/hetfrz_classnuc.F90c016bbcf8f54e9f41bd775eaf5f18bbd42d01cba1667236143000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edugeneralize hetfrz_classnuc_calc routine modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-10-31 11:09:03 -0600c016bbcf8f54e9f41bd775eaf5f18bbd42d01cbageneralize hetfrz_classnuc_calc routineeditsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/physics/cam/hetfrz_classnuc.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/nucleate_ice_cam.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90df8e7551d082e93c1b5e73f35bcca0db2955d2ed1667237514000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse longer var names for indices; implement common name length parameter modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/nucleate_ice_cam.F90 2022-10-31 11:31:54 -0600df8e7551d082e93c1b5e73f35bcca0db2955d2eduse longer var names for indices; implement common name length parametereditsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/physics/cam/nucleate_ice_cam.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90bld/namelist_files/namelist_definition.xmlbld/namelist_files/namelist_defaults_cam.xml1e62f7f847205f98eab4b22c67d3ca578193cfdb1667245269000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comAdd hemco_grid_xdim, hemco_grid_ydim namelist variables to configure HEMCO grid. 2022-10-31 13:41:09 -06001e62f7f847205f98eab4b22c67d3ca578193cfdbAdd hemco_grid_xdim, hemco_grid_ydim namelist variables to configure HEMCO grid.editbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/namelist_definition.xmlExternals_CAM.cfga27c2c90f94e5c1f5abdc3955953f582010661ca1667245918000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate to use tagged release hemco-cesm1_0_hemco3_5_0 2022-10-31 13:51:58 -0600a27c2c90f94e5c1f5abdc3955953f582010661caUpdate to use tagged release hemco-cesm1_0_hemco3_5_0editExternals_CAM.cfgsrc/dynamics/mpas/dp_coupling.F90b66b28996dbe2edfa5ffb8aa8c5e2708fe9021621667254226000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edubetter physics-dynamics coupling with MPAS (code ifdef'ed in since it is answer changing) 2022-10-31 16:10:26 -0600b66b28996dbe2edfa5ffb8aa8c5e2708fe902162better physics-dynamics coupling with MPAS (code ifdef'ed in since it is answer changing)editsrc/dynamics/mpas/dp_coupling.F90src/dynamics/mpas/dycore_budget.F90src/dynamics/se/dycore_budget.F90f9350acebba3b548075e49a3e486d23802b52f071667255028000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edufurther improvements in logfile energy diagnostics 2022-10-31 16:23:48 -0600f9350acebba3b548075e49a3e486d23802b52f07further improvements in logfile energy diagnosticseditsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/mpas/dycore_budget.F90src/dynamics/mpas/dycore_budget.F904145dcae1c9227dc438d7073d22eaa49bd0c321f1667258852000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduremove endrun while developing 2022-10-31 17:27:32 -06004145dcae1c9227dc438d7073d22eaa49bd0c321fremove endrun while developingeditsrc/dynamics/mpas/dycore_budget.F90doc/ChangeLog6d80ce4941f02ebecb983bd70517b193ae297f3c1667303698000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2022-11-01 05:54:58 -06006d80ce4941f02ebecb983bd70517b193ae297f3cupdate ChangeLogeditdoc/ChangeLogsrc/chemistry/aerosol/aerosol_state_mod.F90c018264f7c2ccc1848af29088879dd2133a4dd031667311329000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse longer var names for indices modified: src/chemistry/aerosol/aerosol_state_mod.F90 2022-11-01 08:02:09 -0600c018264f7c2ccc1848af29088879dd2133a4dd03use longer var names for indiceseditsrc/chemistry/aerosol/aerosol_state_mod.F90src/utils/zonal_mean_mod.F906fb531ce8f784a805cb5f2b9468e5ee0f06c71401667314224000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edudeclare lower bound begchunk in assumed shape array args modified: src/utils/zonal_mean_mod.F90 2022-11-01 08:50:24 -06006fb531ce8f784a805cb5f2b9468e5ee0f06c7140declare lower bound begchunk in assumed shape array argseditsrc/utils/zonal_mean_mod.F90src/utils/zonal_mean_mod.F90e9caadc912a46bfa502ab39e673793608c5cbede1667314309000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edudeclare lower bound begchunk in assumed shape array args modified: src/utils/zonal_mean_mod.F90 2022-11-01 08:51:49 -0600e9caadc912a46bfa502ab39e673793608c5cbededeclare lower bound begchunk in assumed shape array argseditsrc/utils/zonal_mean_mod.F90src/physics/cam/cam_diagnostics.F908f9af29b7a6ffb6bc69c3f9620909828f8f1e1cc1667322486000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduTFIX output should be turned on for all dycores using energy fixer 2022-11-01 11:08:06 -06008f9af29b7a6ffb6bc69c3f9620909828f8f1e1ccTFIX output should be turned on for all dycores using energy fixereditsrc/physics/cam/cam_diagnostics.F90src/physics/cam_dev/physpkg.F90src/physics/cam/cam_diagnostics.F90src/physics/cam/physpkg.F90src/physics/cam/constituents.F90eaba6466644e434fad144e9493fde2294fabfd011667325248000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduremove FV dme adjust diagnostics 2022-11-01 11:54:08 -0600eaba6466644e434fad144e9493fde2294fabfd01remove FV dme adjust diagnosticseditsrc/physics/cam/physpkg.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/constituents.F90src/physics/cam/physpkg.F90src/physics/cam_dev/physpkg.F90a1f2fb56faca3bdccbff359e7cd8c319feec68931667329689000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edurenaming for incl. all liq and all ice in one variable 2022-11-01 13:08:09 -0600a1f2fb56faca3bdccbff359e7cd8c319feec6893renaming for incl. all liq and all ice in one variableeditsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/physpkg.F90src/physics/cam/physpkg.F90src/physics/cam_dev/physpkg.F90142f29d5d4651ff0df0e7553ec5d7b22b031fb3c1667336667000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduRevert "renaming for incl. all liq and all ice in one variable" This reverts commit a1f2fb56faca3bdccbff359e7cd8c319feec6893. 2022-11-01 15:04:27 -0600142f29d5d4651ff0df0e7553ec5d7b22b031fb3cRevert "renaming for incl. all liq and all ice in one variable"editsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/physpkg.F90src/chemistry/mozart/mo_extfrc.F90e666b78ea27687a6ec85a54e87d10405aaba564f1667342065000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comRemove extraneous check for n_frc_files in mo_extfrc when HEMCO is enabled. 2022-11-01 16:34:25 -0600e666b78ea27687a6ec85a54e87d10405aaba564fRemove extraneous check for n_frc_files in mo_extfrc when HEMCO is enabled.editsrc/chemistry/mozart/mo_extfrc.F90src/physics/cam_dev/physpkg.F90src/physics/cam/physpkg.F90src/physics/cam/physics_types.F90src/dynamics/se/dycore/prim_advance_mod.F90bld/namelist_files/namelist_defaults_cam.xmlsrc/dynamics/se/dp_coupling.F90b8d70f2ad4c1f0fd22fb0a7f8d4f28774b09f3191667351394000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduadd all water in pressure for SE (large commit!) - recover cam_development answers with #ifdef phl_cam_development 2022-11-01 19:09:54 -0600b8d70f2ad4c1f0fd22fb0a7f8d4f28774b09f319add all water in pressure for SE (large commit!) - recover cam_development answers with #ifdef phl_cam_developmenteditsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/physpkg.F90editbld/namelist_files/namelist_defaults_cam.xmleditsrc/dynamics/se/dp_coupling.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/physics/cam/physics_types.F90src/physics/cam/hetfrz_classnuc_cam.F90f88dbb1bbc91c940aef945a05642de853e680ec81667399977000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edutweak var names modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-11-02 08:39:37 -0600f88dbb1bbc91c940aef945a05642de853e680ec8tweak var nameseditsrc/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/hetfrz_classnuc.F909ca813646f0364de3dde50d86849ae6d6f3bcc281667400013000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitial refactor of het frz code -- generalize modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-11-02 08:40:13 -06009ca813646f0364de3dde50d86849ae6d6f3bcc28initial refactor of het frz code -- generalizeeditsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc.F9094b03ba6960269c3269f8c5b686e920bdb1e28a31667400013000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurefactor round 2 modified: src/physics/cam/hetfrz_classnuc.F90 2022-11-02 08:40:13 -060094b03ba6960269c3269f8c5b686e920bdb1e28a3refactor round 2editsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc.F905f2a208577c939b75f847afe2eb4def9ba52833f1667400013000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrection to Jcnt modified: src/physics/cam/hetfrz_classnuc.F90 2022-11-02 08:40:13 -06005f2a208577c939b75f847afe2eb4def9ba52833fcorrection to Jcnteditsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc.F9032cec1876d4451be4a4113aabbd9b9fb5fffd48c1667400013000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educollkernel operatate on collection of aerosol bins modified: src/physics/cam/hetfrz_classnuc.F90 2022-11-02 08:40:13 -060032cec1876d4451be4a4113aabbd9b9fb5fffd48ccollkernel operatate on collection of aerosol binseditsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc_cam.F90933e4f1a5a10b6215b1395b8b88f2bf4efe800ad1667400013000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edugeneralize hetfrz_classnuc_calc routine modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-11-02 08:40:13 -0600933e4f1a5a10b6215b1395b8b88f2bf4efe800adgeneralize hetfrz_classnuc_calc routineeditsrc/physics/cam/hetfrz_classnuc.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/hetfrz_classnuc_cam.F907371dc7de8be67f11c6ad92e70a2dca9ca6af2fe1667400013000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edutweak var names modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-11-02 08:40:13 -06007371dc7de8be67f11c6ad92e70a2dca9ca6af2fetweak var nameseditsrc/physics/cam/hetfrz_classnuc_cam.F90src/dynamics/mpas/dp_coupling.F90783a85728a253c9e08ab693d0c3bf9809bcfba3a1667403472000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduremove unused variable 2022-11-02 09:37:52 -0600783a85728a253c9e08ab693d0c3bf9809bcfba3aremove unused variableeditsrc/dynamics/mpas/dp_coupling.F90src/dynamics/mpas/dyn_comp.F9078b14743897d3302cb44c90dfde9abee940660621667403486000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edufix bug in how indices for energy diagnostics are set in dyn_comp.F90 2022-11-02 09:38:06 -060078b14743897d3302cb44c90dfde9abee94066062fix bug in how indices for energy diagnostics are set in dyn_comp.F90editsrc/dynamics/mpas/dyn_comp.F90src/dynamics/se/dycore/prim_driver_mod.F90c47d4f2c49914304d29a071c2d23232adb4527c51667415832000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne3.cheyenne.ucar.edufix for bug in se advection 2022-11-02 13:03:52 -0600c47d4f2c49914304d29a071c2d23232adb4527c5fix for bug in se advectioneditsrc/dynamics/se/dycore/prim_driver_mod.F90Externals.cfgcc6082d9297c18144a1f10f8b1da32d2be7fa61b1667425115000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne3.cheyenne.ucar.eduupdate externals to match cesm2_3_alpha10b 2022-11-02 15:38:35 -0600cc6082d9297c18144a1f10f8b1da32d2be7fa61bupdate externals to match cesm2_3_alpha10beditExternals.cfgsrc/physics/cam/clubb_intr.F90e65437b9cb99d4cc4f40a72835dc99a257a3c4ec1667425637000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduDeclaring local variables with state%ncol rather than pcols. This avoid occasional slicing and other complications. Also making everything in clubb_tend_cam follow the same indentation scheme. 2022-11-02 15:47:17 -0600e65437b9cb99d4cc4f40a72835dc99a257a3c4ecDeclaring local variables with state%ncol rather than pcols. This avoid occasional slicing and other complications. Also making everything in clubb_tend_cam follow the same indentation scheme.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90a0005807061e067db1719f9f6b5138e235c5abec1667426170000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdating for the latest changes to CLUBB. 2022-11-02 15:56:10 -0600a0005807061e067db1719f9f6b5138e235c5abecUpdating for the latest changes to CLUBB.editsrc/physics/cam/clubb_intr.F90src/physics/cam/microp_aero.F90src/physics/cam/hetfrz_classnuc_cam.F9093a119012a2195c3b0eb17ba7b3977963520b9201667426253000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduexplicitly name global array for saved cloud-borne aerosols modified: src/physics/cam/hetfrz_classnuc_cam.F90 modified: src/physics/cam/microp_aero.F90 2022-11-02 15:57:33 -060093a119012a2195c3b0eb17ba7b3977963520b920explicitly name global array for saved cloud-borne aerosolseditsrc/physics/cam/microp_aero.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/clubb_intr.F9080a76dbbb274a358b26f352fd8eddf1e9829b64d1667426886000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdating for changes to CLUBB. See https://github.com/larson-group/clubb/pull/1039. 2022-11-02 16:08:06 -060080a76dbbb274a358b26f352fd8eddf1e9829b64dUpdating for changes to CLUBB. See https://github.com/larson-group/clubb/pull/1039.editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90cdd1eebe4e44acd50948bfd79fce1821802469741667426925000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduModified for changes to advance_clubb_core_api. 2022-11-02 16:08:45 -0600cdd1eebe4e44acd50948bfd79fce182180246974Modified for changes to advance_clubb_core_api.editsrc/physics/cam/clubb_intr.F90cime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/se_advection/user_nl_camcime_config/testdefs/testmods_dirs/cam/se_advection/shell_commands53a7525d7a70a195ad496736ba0a6b0d9c8c4de41667502213000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne4.cheyenne.ucar.eduadd noise test 2022-11-03 13:03:33 -060053a7525d7a70a195ad496736ba0a6b0d9c8c4de4add noise testaddcime_config/testdefs/testmods_dirs/cam/se_advection/shell_commandseditcime_config/testdefs/testlist_cam.xmladdcime_config/testdefs/testmods_dirs/cam/se_advection/user_nl_camcime_config/testdefs/testmods_dirs/cam/se_advection/user_nl_cam38123d833ba3413f2df13f75c18b5b208db349b51667502598000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne4.cheyenne.ucar.eduremove erroneous text 2022-11-03 13:09:58 -060038123d833ba3413f2df13f75c18b5b208db349b5remove erroneous texteditcime_config/testdefs/testmods_dirs/cam/se_advection/user_nl_camsrc/control/cam_history_support.F90215a8fee82d72e54c4aceba3a31e420fe94ada001667503437000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate maximum CAM history field length to 32 (up from 24). This updates cam_history_support's fieldname_len parameter from 24 to 32, in order to accommodate longer names for history outputs. This is in support of implementing GEOS-Chem into CESM, as we recently implemented a feature to automatically pass GEOS-Chem diagnostic quantities to CAM history. Some of the GEOS-Chem field names are longer than 24 characters and thus we need to increase the maximum length. Signed-off-by: Haipeng Lin <hplin@seas.harvard.edu> 2022-11-03 13:23:57 -0600215a8fee82d72e54c4aceba3a31e420fe94ada00Update maximum CAM history field length to 32 (up from 24).editsrc/control/cam_history_support.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/shell_commandsbld/namelist_files/namelist_defaults_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_clm145da7b18aa8034d725a8d5a2f62e22a0eb714521667505547000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate default IC for waccmsc on ne30pg3 grid; new testmods dir modified: bld/namelist_files/namelist_defaults_cam.xml new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_clm 2022-11-03 13:59:07 -0600145da7b18aa8034d725a8d5a2f62e22a0eb71452update default IC for waccmsc on ne30pg3 grid; new testmods diraddcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_clmeditbld/namelist_files/namelist_defaults_cam.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_camExternals_CAM.cfg4f91de5ec8d247dae1637a81e0997fee91fe3b581667510469000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate to hemco-cesm1_0_hemco3_5_1 interface 2022-11-03 15:21:09 -06004f91de5ec8d247dae1637a81e0997fee91fe3b58Update to hemco-cesm1_0_hemco3_5_1 interfaceeditExternals_CAM.cfgcime_config/config_component.xmlcime_config/config_compsets.xmlbld/config_files/definition.xml57303445f427e474f6aeb3993e3deabd7c4067521667510494000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comAdd HEMCO-CESM enabled compsets (pending verification) 2022-11-03 15:21:34 -060057303445f427e474f6aeb3993e3deabd7c406752Add HEMCO-CESM enabled compsets (pending verification)editcime_config/config_component.xmleditcime_config/config_compsets.xmleditbld/config_files/definition.xmlsrc/physics/cam/physpkg.F90src/chemistry/mozart/mo_gas_phase_chemdr.F90src/control/cam_comp.F901ce73a8220e5816ffb91b2f877836cdef850adc61667510509000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdates to control flow 2022-11-03 15:21:49 -06001ce73a8220e5816ffb91b2f877836cdef850adc6Updates to control floweditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90editsrc/physics/cam/physpkg.F90editsrc/control/cam_comp.F90Externals_CAM.cfga843f6ae045710a46756f6daa1f69d9e3e3a517b1667510719000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFix incorrect tag name 2022-11-03 15:25:19 -0600a843f6ae045710a46756f6daa1f69d9e3e3a517bFix incorrect tag nameeditExternals_CAM.cfgsrc/chemistry/mozart/mo_chemini.F90src/chemistry/mozart/mo_extfrc.F90src/chemistry/mozart/hco_cc_emissions.F90f7994f14192edef4e6af13d9b59de485a5ecc8391667576271000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comBypass extfrc_inti and now use hco_extfrc_inti 2022-11-04 09:37:51 -0600f7994f14192edef4e6af13d9b59de485a5ecc839Bypass extfrc_inti and now use hco_extfrc_intieditsrc/chemistry/mozart/mo_chemini.F90editsrc/chemistry/mozart/hco_cc_emissions.F90editsrc/chemistry/mozart/mo_extfrc.F90src/chemistry/mozart/mo_extfrc.F90src/chemistry/mozart/hco_cc_emissions.F90377297c70656ca369963474cd84406242bd6f0ad1667576464000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comNow revert mo_extfrc to completely unmodified; fix hco_cc_emissions 2022-11-04 09:41:04 -0600377297c70656ca369963474cd84406242bd6f0adNow revert mo_extfrc to completely unmodified; fix hco_cc_emissionseditsrc/chemistry/mozart/mo_extfrc.F90editsrc/chemistry/mozart/hco_cc_emissions.F90src/chemistry/mozart/mo_extfrc.F9053b4666ee520ac542a5933d3c93bcf9b61e6092d1667577351000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comRevert extra whitespace in mo_extfrc 2022-11-04 09:55:51 -060053b4666ee520ac542a5933d3c93bcf9b61e6092dRevert extra whitespace in mo_extfrceditsrc/chemistry/mozart/mo_extfrc.F90cime_config/config_compsets.xml10478247e8a81b2b696d0e4fde5a86715cde60ca1667577499000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFix incorrect compset name FC2010climo_HCO 2022-11-04 09:58:19 -060010478247e8a81b2b696d0e4fde5a86715cde60caFix incorrect compset name FC2010climo_HCOeditcime_config/config_compsets.xmlsrc/physics/cam/physpkg.F90c9e58ed13c4d99db4b875022cd9415cc02774bea1667585469000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comMove HCOI_Chunk_Init which creates pbuf fields to phys_register for correct restart 2022-11-04 12:11:09 -0600c9e58ed13c4d99db4b875022cd9415cc02774beaMove HCOI_Chunk_Init which creates pbuf fields to phys_register for correct restarteditsrc/physics/cam/physpkg.F90Externals_CAM.cfg0e725264a214f3463441ea67c02e62dc5d3b8f0e1667594794000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduupdated externals 2022-11-04 14:46:34 -06000e725264a214f3463441ea67c02e62dc5d3b8f0eupdated externalseditExternals_CAM.cfgcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_cambld/namelist_files/use_cases/waccm_sc_2000_cam6.xml14ae0a6447c5ff9c47fab60403dee9c310a415051667854057000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edutest with mpas dycore new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_clm modified: bld/namelist_files/use_cases/waccm_sc_2000_cam6.xml 2022-11-07 13:47:37 -070014ae0a6447c5ff9c47fab60403dee9c310a41505test with mpas dycoreaddcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_cameditbld/namelist_files/use_cases/waccm_sc_2000_cam6.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/shell_commandssrc/physics/cam/clubb_intr.F9023861366f9a1dc0216d959d15f5da904ec35bc531667863787000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduMerge problem fixes 2022-11-07 16:29:47 -070023861366f9a1dc0216d959d15f5da904ec35bc53Merge problem fixeseditsrc/physics/cam/clubb_intr.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_camsrc/physics/cam/phys_grid_ctem.F90b2f6a1418488cbad7a90cccec6acff612f3958361667929264000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove debugging diagnostics (*zm3d history fields) modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_cam modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_cam modified: src/physics/cam/phys_grid_ctem.F90 2022-11-08 10:41:04 -0700b2f6a1418488cbad7a90cccec6acff612f395836remove debugging diagnostics (*zm3d history fields)editcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_cameditcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_cameditsrc/physics/cam/phys_grid_ctem.F90bld/build-namelist1b09781bfb285543e015b27b3e9bb9b0baeb1e4a1668032939000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comAdd HEMCO default namelist options 2022-11-09 15:28:59 -07001b09781bfb285543e015b27b3e9bb9b0baeb1e4aAdd HEMCO default namelist optionseditbld/build-namelistExternals_CAM.cfg207165d827af6ce40e5bd35f4c222026c67b24231668036019000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comTag HEMCO_CESM 1.0.1 fix namelist read 2022-11-09 16:20:19 -0700207165d827af6ce40e5bd35f4c222026c67b2423Tag HEMCO_CESM 1.0.1 fix namelist readeditExternals_CAM.cfgbld/namelist_files/namelist_definition.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_camsrc/physics/cam/phys_grid_ctem.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_cam185d688ba66637275ef4887230aae06abc0258df1668037541000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduImplement nfreq namelist variable; misc changes requested by code reviewer modified: bld/namelist_files/namelist_definition.xml modified: cime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_cam modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_cam modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_cam modified: src/physics/cam/phys_grid_ctem.F90 2022-11-09 16:45:41 -0700185d688ba66637275ef4887230aae06abc0258dfImplement nfreq namelist variable; misc changes requested by code reviewereditsrc/physics/cam/phys_grid_ctem.F90editcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_cameditcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_cameditbld/namelist_files/namelist_definition.xmleditcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_camsrc/utils/zonal_mean_mod.F905bbcc0e1feb1691599b0bdb685f549840a5768b11668045828000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumisc changes requested by code reviewer (round 2) modified: src/utils/zonal_mean_mod.F90 2022-11-09 19:03:48 -07005bbcc0e1feb1691599b0bdb685f549840a5768b1misc changes requested by code reviewer (round 2)editsrc/utils/zonal_mean_mod.F90src/physics/cam/physpkg.F90src/physics/cam/phys_grid_ctem.F90src/utils/zonal_mean_mod.F90f45f732af1f687f8664450f8d9deab550574c4031668093653000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement final routines; mics changes modified: src/physics/cam/phys_grid_ctem.F90 modified: src/physics/cam/physpkg.F90 modified: src/utils/zonal_mean_mod.F90 2022-11-10 08:20:53 -0700f45f732af1f687f8664450f8d9deab550574c403implement final routines; mics changeseditsrc/physics/cam/physpkg.F90editsrc/physics/cam/phys_grid_ctem.F90editsrc/utils/zonal_mean_mod.F90src/utils/zonal_mean_mod.F905ef0f8b88e85347c605d5ad5976e3a584cf51b5b1668094865000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edutweaks to some of the comments modified: src/utils/zonal_mean_mod.F90 2022-11-10 08:41:05 -07005ef0f8b88e85347c605d5ad5976e3a584cf51b5btweaks to some of the commentseditsrc/utils/zonal_mean_mod.F90src/utils/zonal_mean_mod.F90src/physics/cam/nudging.F90a3d06650dcd90c12b252793f0f30be2b3bf0e68b1668096196000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement final routines; misc code cleanup modified: src/physics/cam/nudging.F90 modified: src/utils/zonal_mean_mod.F90 2022-11-10 09:03:16 -0700a3d06650dcd90c12b252793f0f30be2b3bf0e68bimplement final routines; misc code cleanupeditsrc/utils/zonal_mean_mod.F90editsrc/physics/cam/nudging.F90cime_config/testdefs/testlist_cam.xmlcime_config/config_pes.xmlcime_config/config_component.xmlcime_config/config_compsets.xml16cc4085b29bae670a088ac627b62da4e35e76c71668115470000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educreate LT (L58) and MT (L93) camchem compsets with cam_dev physics modified: cime_config/config_component.xml modified: cime_config/config_compsets.xml modified: cime_config/config_pes.xml modified: cime_config/testdefs/testlist_cam.xml 2022-11-10 14:24:30 -070016cc4085b29bae670a088ac627b62da4e35e76c7create LT (L58) and MT (L93) camchem compsets with cam_dev physicseditcime_config/testdefs/testlist_cam.xmleditcime_config/config_compsets.xmleditcime_config/config_pes.xmleditcime_config/config_component.xmlsrc/control/cam_history_support.F90Externals_CAM.cfgsrc/physics/cam_dev/micro_pumas_cam.F906e4eab3d15afbaac7f26a3c7d33e6f412dd2ea101668123912000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress reviewer's comments 2022-11-10 16:45:12 -07006e4eab3d15afbaac7f26a3c7d33e6f412dd2ea10Address reviewer's commentseditsrc/control/cam_history_support.F90editExternals_CAM.cfgeditsrc/physics/cam_dev/micro_pumas_cam.F90src/physics/cam/vertical_diffusion.F90src/physics/cam_dev/physpkg.F90src/physics/cam/clubb_intr.F909e6a00000212de94584b62f2fdcaf22f00c742af1668127776000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comemissions moved into own subroutine; move in front of clubb 2022-11-10 17:49:36 -07009e6a00000212de94584b62f2fdcaf22f00c742afemissions moved into own subroutine; move in front of clubbeditsrc/physics/cam/clubb_intr.F90editsrc/physics/cam/vertical_diffusion.F90editsrc/physics/cam_dev/physpkg.F90src/physics/cam/vertical_diffusion.F90src/physics/cam_dev/physpkg.F90ac93026740cb8a6101dc119dfb99662ec5a8635e1668128137000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comfix formatting 2022-11-10 17:55:37 -0700ac93026740cb8a6101dc119dfb99662ec5a8635efix formattingeditsrc/physics/cam/vertical_diffusion.F90editsrc/physics/cam_dev/physpkg.F90src/physics/cam_dev/physpkg.F90src/physics/cam/clubb_intr.F90221b1982adf91e95e0bc54d05d90b6852a6f9b6f1668130809000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comcleanup 2022-11-10 18:40:09 -0700221b1982adf91e95e0bc54d05d90b6852a6f9b6fcleanupeditsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F906336bbc57e9c1997a94421dc38e8132e565616841668133258000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comcleanup 2022-11-10 19:20:58 -07006336bbc57e9c1997a94421dc38e8132e56561684cleanupeditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90153c544015d9b1664fa683937b3157f027432e131668210649000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate src/physics/cam/clubb_intr.F90 Co-authored-by: Francis Vitt <fvitt@ucar.edu> 2022-11-11 16:50:49 -0700153c544015d9b1664fa683937b3157f027432e13Update src/physics/cam/clubb_intr.F90editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F906e353969ca5b407e7c8601d5a4789223a662a1bc1668211888000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate src/physics/cam/clubb_intr.F90 Co-authored-by: Francis Vitt <fvitt@ucar.edu> 2022-11-11 17:11:28 -07006e353969ca5b407e7c8601d5a4789223a662a1bcUpdate src/physics/cam/clubb_intr.F90editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90ca21c02573704223413ecab4e0896b2758704bcf1668211940000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comaddress francis review 2022-11-11 17:12:20 -0700ca21c02573704223413ecab4e0896b2758704bcfaddress francis revieweditsrc/physics/cam/clubb_intr.F90src/physics/chemistry.F90f5d4f4461600642856b83078c8f449fddf637a0b1668212661000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd fix for chemistry initialization 2022-11-11 17:24:21 -0700f5d4f4461600642856b83078c8f449fddf637a0bAdd fix for chemistry initializationaddsrc/physics/chemistry.F90src/chemistry/mozart/chemistry.F90src/physics/chemistry.F907cf03627005d23a9a880856d392fccfeb7aae8ad1668213020000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduput chemistry fix in correct directory 2022-11-11 17:30:20 -07007cf03627005d23a9a880856d392fccfeb7aae8adput chemistry fix in correct directoryeditsrc/chemistry/mozart/chemistry.F90deletesrc/physics/chemistry.F90src/physics/cam/clubb_intr.F90bd44effb292951907bcf1a552eb7fb3842aaf8981668281508000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comremoved unused q_tmp variable 2022-11-12 12:31:48 -0700bd44effb292951907bcf1a552eb7fb3842aaf898removed unused q_tmp variableeditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F904c71e3daf4e8bacd3625ff51f54b703a0f56b1301668442926000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate src/physics/cam/clubb_intr.F90 Co-authored-by: Jesse Nusbaumer <nusbaume@ucar.edu> 2022-11-14 09:22:06 -07004c71e3daf4e8bacd3625ff51f54b703a0f56b130Update src/physics/cam/clubb_intr.F90editsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F903c77548be9c5b5030d3bc9bd4674141ab0a54bd71668443041000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comaddress jesse's review 2022-11-14 09:24:01 -07003c77548be9c5b5030d3bc9bd4674141ab0a54bd7address jesse's revieweditsrc/physics/cam/clubb_intr.F90src/chemistry/mozart/chemistry.F900b867c6f2bef0c806b27ad0e86a1f6ffc1ea3fcd1668461075000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate src/chemistry/mozart/chemistry.F90 Co-authored-by: Francis Vitt <fvitt@ucar.edu> 2022-11-14 14:24:35 -07000b867c6f2bef0c806b27ad0e86a1f6ffc1ea3fcdUpdate src/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/chemistry.F90cime_config/config_compsets.xml5ed01b3369fb56064e4fd1e7de07bed3a2bf68901668467286000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comAdd FCts2nudged_HCO compset. 2022-11-14 16:08:06 -07005ed01b3369fb56064e4fd1e7de07bed3a2bf6890Add FCts2nudged_HCO compset.editcime_config/config_compsets.xmlcime_config/testdefs/testmods_dirs/cam/se_advection/user_nl_camcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/se_advection/shell_commands6293174130afeec5313f88f16b7deb235651774f1668470980000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduremove added test 2022-11-14 17:09:40 -07006293174130afeec5313f88f16b7deb235651774fremove added testdeletecime_config/testdefs/testmods_dirs/cam/se_advection/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/se_advection/shell_commandseditcime_config/testdefs/testlist_cam.xmlsrc/physics/cam_dev/physpkg.F90f07524c3e95e8b57b7e87f5815add5678ff81e951668474221000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadded check_energy to emissions call 2022-11-14 18:03:41 -0700f07524c3e95e8b57b7e87f5815add5678ff81e95added check_energy to emissions calleditsrc/physics/cam_dev/physpkg.F90doc/ChangeLog.gitignore11f8f3399bb6c871cbe591a2f0d82bd2f42d415e1668549317000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduPreliminary ChangeLog for cam6_3_083 2022-11-15 14:55:17 -070011f8f3399bb6c871cbe591a2f0d82bd2f42d415ePreliminary ChangeLog for cam6_3_083edit.gitignoreeditdoc/ChangeLogdoc/ChangeLog91e15fb9b8389a7d18a2adae910d24d642e1b7e11668552411000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comupdate ChangeLog 2022-11-15 15:46:51 -070091e15fb9b8389a7d18a2adae910d24d642e1b7e1update ChangeLogeditdoc/ChangeLogExternals.cfgc496f13d32cd9e20a9467c5b8e92886cbe3f18f31668636127000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne6.cheyenne.ucar.eduupdate cdeps and cice externals 2022-11-16 15:02:07 -0700c496f13d32cd9e20a9467c5b8e92886cbe3f18f3update cdeps and cice externalseditExternals.cfgsrc/physics/cam_dev/micro_pumas_cam.F90d00fcb9085a74234fa4288b3b34104315252e3e31668704479000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUse handle_allocate_error in micro_pumas_cam 2022-11-17 10:01:19 -0700d00fcb9085a74234fa4288b3b34104315252e3e3Use handle_allocate_error in micro_pumas_cameditsrc/physics/cam_dev/micro_pumas_cam.F90doc/ChangeLogb29240d1fd19223c6745de7f1f933fa121b99c3e1668715679000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.eduadding changelog 2022-11-17 13:07:59 -0700b29240d1fd19223c6745de7f1f933fa121b99c3eadding changelogeditdoc/ChangeLogExternals.cfgee712b70a728a02eb6228c7f344577f67952296d1668721400000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@cheyenne6.cheyenne.ucar.eduupdate cdeps external 2022-11-17 14:43:20 -0700ee712b70a728a02eb6228c7f344577f67952296dupdate cdeps externaleditExternals.cfgdoc/ChangeLoge9f65c11d097c6ba5e7a0e84114b2e586de61d861668804013000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.edufinal changelog 2022-11-18 13:40:13 -0700e9f65c11d097c6ba5e7a0e84114b2e586de61d86final changelogeditdoc/ChangeLogsrc/utils/zonal_mean_mod.F90src/physics/cam/phys_grid_ctem.F9082e8203f3c9a6557ef035af8a3b0209157dab7231668807984000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educheck allocation status modified: src/physics/cam/phys_grid_ctem.F90 modified: src/utils/zonal_mean_mod.F90 2022-11-18 14:46:24 -070082e8203f3c9a6557ef035af8a3b0209157dab723check allocation statuseditsrc/utils/zonal_mean_mod.F90editsrc/physics/cam/phys_grid_ctem.F90src/utils/zonal_mean_mod.F90a01b6527a26225b84c74ffc7e7a9222ad1a05e031669046217000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse physconst pi modified: src/utils/zonal_mean_mod.F90 2022-11-21 08:56:57 -0700a01b6527a26225b84c74ffc7e7a9222ad1a05e03use physconst pieditsrc/utils/zonal_mean_mod.F90src/physics/rrtmg/cloud_rad_props.F90src/physics/rrtmg/radiation.F905c18715f62c236461f628dae3cd78c9fa670e29f1669064208000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFixes initialization for cam_dev 2022-11-21 13:56:48 -07005c18715f62c236461f628dae3cd78c9fa670e29fFixes initialization for cam_deveditsrc/physics/rrtmg/cloud_rad_props.F90editsrc/physics/rrtmg/radiation.F90src/physics/rrtmg/cloud_rad_props.F90735f5ddf068a90b79f081d740a332afacd0423031669067706000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduInitialize pbuf indices 2022-11-21 14:55:06 -0700735f5ddf068a90b79f081d740a332afacd042303Initialize pbuf indiceseditsrc/physics/rrtmg/cloud_rad_props.F90bld/configurecime_config/buildcppcime_config/buildlib4664a991a288b8f4e518968951e1fe2e3f8387461669654655000http://carson.math.uwm.edu/jenkins/user/jedwardsjedwardsjedwards@ucar.eduupdate python paths, only build ali_arms with waccm 2022-11-28 09:57:35 -07004664a991a288b8f4e518968951e1fe2e3f838746update python paths, only build ali_arms with waccmeditcime_config/buildlibeditcime_config/buildcppeditbld/configuredoc/ChangeLogece3b5ad5a2ae458a12755dd4b7163f809627f9a1669655642000http://carson.math.uwm.edu/jenkins/user/courtneypcourtneypcourtneyp@izumi.cgd.ucar.edufinal changelog 2022-11-28 10:14:02 -0700ece3b5ad5a2ae458a12755dd4b7163f809627f9afinal changelogeditdoc/ChangeLogsrc/cpl/nuopc/atm_comp_nuopc.F903673525eb3fd09b88f2219c300d64b8749ee24971669658197000http://carson.math.uwm.edu/jenkins/user/jedwardsjedwardsjedwards@ucar.edureduce the number of times orb_param is printed to log 2022-11-28 10:56:37 -07003673525eb3fd09b88f2219c300d64b8749ee2497reduce the number of times orb_param is printed to logeditsrc/cpl/nuopc/atm_comp_nuopc.F90cime_config/testdefs/testlist_cam.xmlcime_config/config_component.xml78ac1418163ef76c76f849d43226e18adf7e4c1b1669681030000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhanges to appease code reviewer modified: cime_config/config_component.xml modified: cime_config/testdefs/testlist_cam.xml 2022-11-28 17:17:10 -070078ac1418163ef76c76f849d43226e18adf7e4c1bchanges to appease code reviewereditcime_config/config_component.xmleditcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testlist_cam.xml6c37208664443267964e9f01fe48fef33895eee51669731614000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurun refined grid tests on 20 cheyenne nodes modified: cime_config/testdefs/testlist_cam.xml 2022-11-29 07:20:14 -07006c37208664443267964e9f01fe48fef33895eee5run refined grid tests on 20 cheyenne nodeseditcime_config/testdefs/testlist_cam.xmlsrc/dynamics/mpas/dycore_budget.F90src/dynamics/mpas/dp_coupling.F907def1f874da0ab15b3ceba40023a169dc98d11841669843772000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduMPAS: add all water to pressure and consistent height-pressure formulation 2022-11-30 14:29:32 -07007def1f874da0ab15b3ceba40023a169dc98d1184MPAS: add all water to pressure and consistent height-pressure formulationeditsrc/dynamics/mpas/dp_coupling.F90editsrc/dynamics/mpas/dycore_budget.F90src/control/cam_history_support.F90src/physics/cam_dev/micro_pumas_cam.F90f6c7ca89d92117d7fa0c4e6b152974a04d8273f31669845867000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress reviewer's comments 2022-11-30 15:04:27 -0700f6c7ca89d92117d7fa0c4e6b152974a04d8273f3Address reviewer's commentseditsrc/physics/cam_dev/micro_pumas_cam.F90editsrc/control/cam_history_support.F90src/dynamics/mpas/dp_coupling.F90src/utils/cam_thermo.F90src/dynamics/mpas/dycore_budget.F90src/physics/cam/check_energy.F90d11b9f1d5d56f2d24ad2595288827a52a2350f911669846099000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduseparate "static energy" into enthalpy and PHIS energy 2022-11-30 15:08:19 -0700d11b9f1d5d56f2d24ad2595288827a52a2350f91separate "static energy" into enthalpy and PHIS energyeditsrc/dynamics/mpas/dycore_budget.F90editsrc/physics/cam/check_energy.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/utils/cam_thermo.F90src/dynamics/mpas/dycore_budget.F9092b0e395de4b2155bdb3efcdbc7f07d28498523d1669846190000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edutypo 2022-11-30 15:09:50 -070092b0e395de4b2155bdb3efcdbc7f07d28498523dtypoeditsrc/dynamics/mpas/dycore_budget.F90src/dynamics/mpas/dycore_budget.F90cbc0d29b340b8b0d33cb2d96881250e55dd91a8a1669850435000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduminor addtions in dycore_budget.F90 2022-11-30 16:20:35 -0700cbc0d29b340b8b0d33cb2d96881250e55dd91a8aminor addtions in dycore_budget.F90editsrc/dynamics/mpas/dycore_budget.F90cime_config/testdefs/testlist_cam.xml30dded98ff6ab724d80565cdc01151d1b2a214901669917581000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduReduce number of PEs for CONUS regression tests 2022-12-01 10:59:41 -070030dded98ff6ab724d80565cdc01151d1b2a21490Reduce number of PEs for CONUS regression testseditcime_config/testdefs/testlist_cam.xmlsrc/physics/cam_dev/micro_pumas_cam.F90ceb57ebf7911fa68bab3872be38295acdb3345a41669920333000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduadd a couple of parameters 2022-12-01 11:45:33 -0700ceb57ebf7911fa68bab3872be38295acdb3345a4add a couple of parameterseditsrc/physics/cam_dev/micro_pumas_cam.F90bld/namelist_files/namelist_definition.xmlbld/build-namelistcime_config/config_component.xmlcime_config/usermods_dirs/frierson/user_nl_cplcime_config/usermods_dirs/frierson/user_nl_camef7c205de14541d040f9cd48d376ec478d3883221669936612000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduremove unneeded use_case 2022-12-01 16:16:52 -0700ef7c205de14541d040f9cd48d376ec478d388322remove unneeded use_caseeditcime_config/config_component.xmldeletecime_config/usermods_dirs/frierson/user_nl_cpleditbld/namelist_files/namelist_definition.xmleditbld/build-namelistdeletecime_config/usermods_dirs/frierson/user_nl_camsrc/control/cam_control_mod.F90src/physics/simple/physpkg.F90src/physics/simple/frierson_cam.F90e00b0781205f3b2701713847e8f0f619504403a31669999240000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMore changes from review 2022-12-02 09:40:40 -0700e00b0781205f3b2701713847e8f0f619504403a3More changes from revieweditsrc/physics/simple/physpkg.F90editsrc/control/cam_control_mod.F90editsrc/physics/simple/frierson_cam.F90bld/namelist_files/namelist_definition.xmlExternals_CAM.cfgbld/build-namelistbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/clubb_intr.F909e4fd33510a1646c5b506e1b3450b080ed7ba0511670029040000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdate to newest CLUBB tag, organized namelist variables and update CAM namelist files for new options 2022-12-02 17:57:20 -07009e4fd33510a1646c5b506e1b3450b080ed7ba051Update to newest CLUBB tag, organized namelist variables and update CAM namelist files for new optionseditbld/namelist_files/namelist_defaults_cam.xmleditsrc/physics/cam/clubb_intr.F90editbld/build-namelisteditExternals_CAM.cfgeditbld/namelist_files/namelist_definition.xmlsrc/physics/rrtmg/cloud_rad_props.F90src/physics/cam_dev/micro_pumas_cam.F90src/physics/cam/micro_pumas_cam.F90src/physics/rrtmg/radiation.F908407498979c239e154d16dc9e776542617d235e11670077531000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comInitializing variables to avoid startup interpolation error in cam_dev. 2022-12-03 07:25:31 -07008407498979c239e154d16dc9e776542617d235e1Initializing variables to avoid startup interpolation error in cam_dev.editsrc/physics/cam/micro_pumas_cam.F90editsrc/physics/rrtmg/radiation.F90editsrc/physics/cam_dev/micro_pumas_cam.F90editsrc/physics/rrtmg/cloud_rad_props.F90Externals.cfg960b29412de10aba32d827f08965aad3ffddbb1f1670276017000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate cime to fix create_newcase 2022-12-05 14:33:37 -0700960b29412de10aba32d827f08965aad3ffddbb1fUpdate cime to fix create_newcaseeditExternals.cfgsrc/physics/cam/clubb_intr.F9070af3815979af9649d837d36fc45e1aeac32fb1c1670276294000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduRearrange namelist items, final merge changes 2022-12-05 14:38:14 -070070af3815979af9649d837d36fc45e1aeac32fb1cRearrange namelist items, final merge changeseditsrc/physics/cam/clubb_intr.F90src/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/microp_aero.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/hetfrz_classnuc.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90e69b376d5398c85ebfaa399152a661adb4e335721670282104000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement aerosol interfaces for het freezing modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 modified: src/physics/cam/microp_aero.F90 2022-12-05 16:15:04 -0700e69b376d5398c85ebfaa399152a661adb4e33572implement aerosol interfaces for het freezingeditsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/physics/cam/hetfrz_classnuc.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/physics/cam/microp_aero.F90bld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xml6e9c026d77bb006b042066bb3a5ebb4092576b561670282429000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdding in Colins surface flux smoothing patch 2022-12-05 16:20:29 -07006e9c026d77bb006b042066bb3a5ebb4092576b56Adding in Colins surface flux smoothing patcheditsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_definition.xmleditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_definition.xmlbld/build-namelistbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/clubb_intr.F90f5e1895fd6bf41dadae115efdc7f12f0ffa5a1711670364296000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comremove clubbtop limiter 2022-12-06 15:04:56 -0700f5e1895fd6bf41dadae115efdc7f12f0ffa5a171remove clubbtop limitereditbld/namelist_files/namelist_definition.xmleditbld/namelist_files/namelist_defaults_cam.xmleditbld/build-namelisteditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F9061cd936dcb9e400c6d9dc4ec2806a9ad8d4b60271670365182000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comremove comment 2022-12-06 15:19:42 -070061cd936dcb9e400c6d9dc4ec2806a9ad8d4b6027remove commenteditsrc/physics/cam/clubb_intr.F90src/chemistry/aerosol/aerosol_state_mod.F90src/physics/cam/hetfrz_classnuc_cam.F902e0f8d0c6356b46dcaeabe488f9e0519d219bd691670366310000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrect radius units; some clean up modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-12-06 15:38:30 -07002e0f8d0c6356b46dcaeabe488f9e0519d219bd69correct radius units; some clean upeditsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90bld/namelist_files/namelist_defaults_cam.xmlee43521a73cdf9ad2ba56d3a29fa31c1273a890f1670441275000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduNamelist defaults updates to get tests running 2022-12-07 12:27:55 -0700ee43521a73cdf9ad2ba56d3a29fa31c1273a890fNamelist defaults updates to get tests runningeditbld/namelist_files/namelist_defaults_cam.xmlExternals.cfgcime_config/testdefs/testlist_cam.xmlsrc/physics/cam_dev/micro_pumas_cam.F90259ac9a4b47e6156b6aff9c9418875bfcc40c3df1670451396000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate mosart external to work with updated cime and address final reviewer's comments 2022-12-07 15:16:36 -0700259ac9a4b47e6156b6aff9c9418875bfcc40c3dfUpdate mosart external to work with updated cime and address final reviewer's commentseditExternals.cfgeditsrc/physics/cam_dev/micro_pumas_cam.F90editcime_config/testdefs/testlist_cam.xmlsrc/physics/cam_dev/micro_pumas_cam.F90bed16941d9c7289b90d4fb05e83e980e55f60acd1670458599000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix allocation problem 2022-12-07 17:16:39 -0700bed16941d9c7289b90d4fb05e83e980e55f60acdFix allocation problemeditsrc/physics/cam_dev/micro_pumas_cam.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/microp_aero.F90src/physics/cam/hetfrz_classnuc_cam.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90ac9cb40a243694e0a629c55086ff99a12e6ec3d31670523338000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement size wghts; misc cleanup type changes modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 modified: src/physics/cam/microp_aero.F90 2022-12-08 11:15:38 -0700ac9cb40a243694e0a629c55086ff99a12e6ec3d3implement size wghts; misc cleanup type changeseditsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/physics/cam/microp_aero.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90d6477a32ba03af9fc9236f659ab72f758bd789071670524144000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurestore ibin and ispc index variable names modified: src/chemistry/aerosol/aerosol_state_mod.F90 2022-12-08 11:29:04 -0700d6477a32ba03af9fc9236f659ab72f758bd78907restore ibin and ispc index variable nameseditsrc/chemistry/aerosol/aerosol_state_mod.F90src/chemistry/modal_aero/modal_aero_gasaerexch.F90src/chemistry/pp_trop_mam4/chem_mech.incime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_defaults_cam.xml243ec74441b1d073a76f7848a72cd195e10f5ec81670532711000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitial mods modified: bld/namelist_files/namelist_defaults_cam.xml modified: cime_config/testdefs/testlist_cam.xml modified: src/chemistry/modal_aero/modal_aero_gasaerexch.F90 modified: src/chemistry/pp_trop_mam4/chem_mech.in 2022-12-08 13:51:51 -0700243ec74441b1d073a76f7848a72cd195e10f5ec8initial modseditsrc/chemistry/modal_aero/modal_aero_gasaerexch.F90editbld/namelist_files/namelist_defaults_cam.xmleditsrc/chemistry/pp_trop_mam4/chem_mech.ineditcime_config/testdefs/testlist_cam.xmlsrc/chemistry/pp_trop_mam4/mo_indprd.F90src/chemistry/pp_trop_mam4/chem_mech.docsrc/chemistry/pp_trop_mam4/mo_lu_solve.F90src/chemistry/pp_trop_mam4/mo_prod_loss.F90src/chemistry/pp_trop_mam4/mo_sim_dat.F90src/chemistry/pp_trop_mam4/mo_rxt_rates_conv.F90src/chemistry/pp_trop_mam4/mo_lu_factor.F90src/chemistry/pp_trop_mam4/mo_nln_matrix.F90src/chemistry/pp_trop_mam4/chem_mods.F90src/chemistry/pp_trop_mam4/m_spc_id.F90bld/namelist_files/master_gas_drydep_list.xmlsrc/chemistry/pp_trop_mam4/mo_adjrxt.F90src/chemistry/pp_trop_mam4/mo_setrxt.F90src/chemistry/pp_trop_mam4/m_rxt_id.F90src/chemistry/pp_trop_mam4/mo_lin_matrix.F90ca5d6968bd33bea2a0a75c57a429d164d72aa8971670533767000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate chem mech, dry dep SOAG modified: bld/namelist_files/master_gas_drydep_list.xml modified: src/chemistry/pp_trop_mam4/chem_mech.doc modified: src/chemistry/pp_trop_mam4/chem_mods.F90 modified: src/chemistry/pp_trop_mam4/m_rxt_id.F90 modified: src/chemistry/pp_trop_mam4/m_spc_id.F90 modified: src/chemistry/pp_trop_mam4/mo_adjrxt.F90 modified: src/chemistry/pp_trop_mam4/mo_indprd.F90 modified: src/chemistry/pp_trop_mam4/mo_lin_matrix.F90 modified: src/chemistry/pp_trop_mam4/mo_lu_factor.F90 modified: src/chemistry/pp_trop_mam4/mo_lu_solve.F90 modified: src/chemistry/pp_trop_mam4/mo_nln_matrix.F90 modified: src/chemistry/pp_trop_mam4/mo_prod_loss.F90 modified: src/chemistry/pp_trop_mam4/mo_rxt_rates_conv.F90 modified: src/chemistry/pp_trop_mam4/mo_setrxt.F90 modified: src/chemistry/pp_trop_mam4/mo_sim_dat.F90 2022-12-08 14:09:27 -0700ca5d6968bd33bea2a0a75c57a429d164d72aa897update chem mech, dry dep SOAGeditbld/namelist_files/master_gas_drydep_list.xmleditsrc/chemistry/pp_trop_mam4/mo_prod_loss.F90editsrc/chemistry/pp_trop_mam4/mo_setrxt.F90editsrc/chemistry/pp_trop_mam4/m_spc_id.F90editsrc/chemistry/pp_trop_mam4/mo_lu_factor.F90editsrc/chemistry/pp_trop_mam4/m_rxt_id.F90editsrc/chemistry/pp_trop_mam4/chem_mech.doceditsrc/chemistry/pp_trop_mam4/mo_rxt_rates_conv.F90editsrc/chemistry/pp_trop_mam4/mo_sim_dat.F90editsrc/chemistry/pp_trop_mam4/mo_adjrxt.F90editsrc/chemistry/pp_trop_mam4/chem_mods.F90editsrc/chemistry/pp_trop_mam4/mo_nln_matrix.F90editsrc/chemistry/pp_trop_mam4/mo_indprd.F90editsrc/chemistry/pp_trop_mam4/mo_lin_matrix.F90editsrc/chemistry/pp_trop_mam4/mo_lu_solve.F90doc/ChangeLogee94a757f9976253befb02390adbd61b2632e0091670541037000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd ChangeLog for cam6_3_086 2022-12-08 16:10:37 -0700ee94a757f9976253befb02390adbd61b2632e009Add ChangeLog for cam6_3_086editdoc/ChangeLogsrc/physics/cam/subcol_SILHS.F90cd1ccf2715fb39ea0b1f5d9cb71445e5a207a7a01670543986000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdating for changes to CLUBB. See https://github.com/larson-group/clubb/commit/e4f125ba067ba8083f917e0e06b6b2398483d3e4. 2022-12-08 16:59:46 -0700cd1ccf2715fb39ea0b1f5d9cb71445e5a207a7a0Updating for changes to CLUBB. See https://github.com/larson-group/clubb/commit/e4f125ba067ba8083f917e0e06b6b2398483d3e4.editsrc/physics/cam/subcol_SILHS.F90.github/workflows/branch_push_workflow.yml6a6ee7e04ccbaefa6f1b47c0ccc37d488f5578ea1670605591000http://carson.math.uwm.edu/jenkins/user/nusbaumenusbaumenusbaume@ucar.eduUpdate python version used in issue-closing workflow. 2022-12-09 10:06:31 -07006a6ee7e04ccbaefa6f1b47c0ccc37d488f5578eaUpdate python version used in issue-closing workflow.edit.github/workflows/branch_push_workflow.ymlcime_config/testdefs/testmods_dirs/cam/silhs/user_nl_cam457a833469b811e25f6de79f7b7ba43c9c972d041670610647000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdding wp3_pr_dfsn (new wp3 budget term) to relevant CAM scripts. See https://github.com/larson-group/clubb/commit/3523145a4f3c69d90f797ac315a808b0607df8af and https://github.com/larson-group/clubb/issues/920. 2022-12-09 11:30:47 -0700457a833469b811e25f6de79f7b7ba43c9c972d04Adding wp3_pr_dfsn (new wp3 budget term) to relevant CAM scripts.editcime_config/testdefs/testmods_dirs/cam/silhs/user_nl_camcime_config/testdefs/testmods_dirs/cam/silhs/user_nl_cam39452a69427c1be06bff1ae35c79e8ef5b10aa771670610732000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduRenaming wpthlp_entermfl to wpthlp_enter_mfl to be consistent with the CLUBB repo. 2022-12-09 11:32:12 -070039452a69427c1be06bff1ae35c79e8ef5b10aa77Renaming wpthlp_entermfl to wpthlp_enter_mfl to be consistent with the CLUBB repo.editcime_config/testdefs/testmods_dirs/cam/silhs/user_nl_cambld/build-namelistbld/namelist_files/use_cases/2000_cam6.xmlbld/namelist_files/use_cases/hist_cam6.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/use_cases/2010_cam6.xmlbld/namelist_files/use_cases/1850_cam6.xmlbld/namelist_files/master_gas_wetdep_list.xml07de362507ab0864b21eac3d00156b8fee4260ee1670614535000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate default namelist settings modified: bld/build-namelist modified: bld/namelist_files/master_gas_wetdep_list.xml modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/use_cases/1850_cam6.xml modified: bld/namelist_files/use_cases/2000_cam6.xml modified: bld/namelist_files/use_cases/2010_cam6.xml modified: bld/namelist_files/use_cases/hist_cam6.xml 2022-12-09 12:35:35 -070007de362507ab0864b21eac3d00156b8fee4260eeupdate default namelist settingseditbld/namelist_files/use_cases/2010_cam6.xmleditbld/namelist_files/use_cases/hist_cam6.xmleditbld/namelist_files/use_cases/1850_cam6.xmleditbld/namelist_files/master_gas_wetdep_list.xmleditbld/build-namelisteditbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/use_cases/2000_cam6.xmlsrc/cpl/nuopc/atm_comp_nuopc.F90d02d4892440a359b25b49b340543f0f6f95d91ae1670620729000http://carson.math.uwm.edu/jenkins/user/jedwardsjedwardsjedwards@ucar.edumv shr_file to shr_log, fix issue in logunit 2022-12-09 14:18:49 -0700d02d4892440a359b25b49b340543f0f6f95d91aemv shr_file to shr_log, fix issue in loguniteditsrc/cpl/nuopc/atm_comp_nuopc.F90bld/build-namelist8bdf2db44ae1b1e95236fe0965f2fe10b9da5b791670695354000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduturn on megan and ocean emis when not scam and not aquaplanet modified: bld/build-namelist 2022-12-10 11:02:34 -07008bdf2db44ae1b1e95236fe0965f2fe10b9da5b79turn on megan and ocean emis when not scam and not aquaplaneteditbld/build-namelistsrc/physics/cam/clubb_intr.F904f5b7983a1b52695be27b9854c5133ac8451c7931670885080000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduCheck for divide by zero in very rare cases that failed one aux_cam test 2022-12-12 15:44:40 -07004f5b7983a1b52695be27b9854c5133ac8451c793Check for divide by zero in very rare cases that failed one aux_cam testeditsrc/physics/cam/clubb_intr.F90.github/workflows/branch_push_workflow.ymlfe6ee7669a983b13812be0229249049caca279691670943727000http://carson.math.uwm.edu/jenkins/user/jedwardsjedwardsjedwards@ucar.eduupdate the workflow to use checkout@v3 2022-12-13 08:02:07 -0700fe6ee7669a983b13812be0229249049caca27969update the workflow to use checkout@v3edit.github/workflows/branch_push_workflow.yml.github/workflows/branch_push_workflow.ymlb21e4f38b4d8f4a47b73dfb073a569a1ce2112ed1670943871000http://carson.math.uwm.edu/jenkins/user/jedwardsjedwardsjedwards@ucar.eduupdate setup-python to @v4 2022-12-13 08:04:31 -0700b21e4f38b4d8f4a47b73dfb073a569a1ce2112edupdate setup-python to @v4edit.github/workflows/branch_push_workflow.ymlsrc/physics/spcam/ecpp/module_ecpp_ppdriver2.F9014b55136d48de32a98804af159aa6aeb34e885871670969477000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduTurn off unit 155 ECPP writing by default 2022-12-13 15:11:17 -070014b55136d48de32a98804af159aa6aeb34e88587Turn off unit 155 ECPP writing by defaulteditsrc/physics/spcam/ecpp/module_ecpp_ppdriver2.F90src/physics/cam/clubb_intr.F9070a40763fd040f75509a94836e9d2f4c2d919e261670977100000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comimplement lower bound on clubbtop=pver 2022-12-13 17:18:20 -070070a40763fd040f75509a94836e9d2f4c2d919e26implement lower bound on clubbtop=pvereditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xml3b682afef17182346cabac3555da8e7773d51c2a1670977447000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAddress Adams review comments 2022-12-13 17:24:07 -07003b682afef17182346cabac3555da8e7773d51c2aAddress Adams review commentseditsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/spcam/ecpp/module_ecpp_ppdriver2.F902b8a6fe25d730115949387fced90a85c85911b991671042748000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduCleanup unit initializations 2022-12-14 11:32:28 -07002b8a6fe25d730115949387fced90a85c85911b99Cleanup unit initializationseditsrc/physics/spcam/ecpp/module_ecpp_ppdriver2.F90cime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlec9fe53241cfafce9746b7c5df487280ef95f46f1671049645000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduset namelist defaults for 93 layer config; tweaks to test list modified: bld/namelist_files/namelist_defaults_cam.xml modified: cime_config/testdefs/testlist_cam.xml 2022-12-14 13:27:25 -0700ec9fe53241cfafce9746b7c5df487280ef95f46fset namelist defaults for 93 layer config; tweaks to test listeditbld/namelist_files/namelist_defaults_cam.xmleditcime_config/testdefs/testlist_cam.xmlsrc/dynamics/se/dycore/prim_advance_mod.F90adf8ea512603c1808e48c0ece74cd876d5e1707e1671060912000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edufix bug in mass diagnostics in SE 2022-12-14 16:35:12 -0700adf8ea512603c1808e48c0ece74cd876d5e1707efix bug in mass diagnostics in SEeditsrc/dynamics/se/dycore/prim_advance_mod.F90src/cpl/nuopc/atm_import_export.F90bld/build-namelistcime_config/buildnmlcime_config/config_component.xmlsrc/cpl/nuopc/atm_comp_nuopc.F90src/control/camsrfexch.F90src/cpl/nuopc/atm_stream_ndep.F90bld/namelist_files/namelist_definition.xmlsrc/cpl/nuopc/atm_comp_shr.F90cfd55a466055f825b3fca47cc75a3e694e1d82491671123362000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduadded ndep stream capability to cam nuopca cap - now cam always sends ndep - either from WACCM or from reading in stream data 2022-12-15 09:56:02 -0700cfd55a466055f825b3fca47cc75a3e694e1d8249added ndep stream capability to cam nuopca cap - now cam always sends ndep - either from WACCM or from reading in stream dataeditsrc/cpl/nuopc/atm_stream_ndep.F90editcime_config/config_component.xmleditsrc/cpl/nuopc/atm_comp_nuopc.F90editbld/build-namelisteditbld/namelist_files/namelist_definition.xmldeletesrc/cpl/nuopc/atm_comp_shr.F90editsrc/control/camsrfexch.F90editcime_config/buildnmleditsrc/cpl/nuopc/atm_import_export.F90src/chemistry/pp_waccm_sc_mam4/mo_sim_dat.F90src/chemistry/pp_trop_mam4/chem_mech.docsrc/chemistry/pp_trop_mam4/mo_lu_solve.F90src/chemistry/pp_waccm_sc_mam4/m_spc_id.F90bld/namelist_files/use_cases/2010_cam6.xmlsrc/chemistry/pp_trop_mam4/mo_prod_loss.F90src/chemistry/pp_waccm_sc_mam4/chem_mods.F90src/chemistry/pp_waccm_sc_mam4/mo_adjrxt.F90bld/namelist_files/use_cases/waccm_sc_1850_cam6.xmlsrc/chemistry/pp_trop_mam4/mo_nln_matrix.F90src/chemistry/pp_trop_mam4/chem_mech.insrc/chemistry/pp_trop_mam4/m_spc_id.F90src/chemistry/pp_trop_mam4/mo_adjrxt.F90src/chemistry/pp_waccm_sc_mam4/mo_indprd.F90src/chemistry/pp_waccm_sc_mam4/mo_prod_loss.F90src/chemistry/pp_trop_mam4/m_rxt_id.F90bld/namelist_files/use_cases/waccm_sc_2000_cam6.xmlsrc/chemistry/pp_trop_mam4/mo_lin_matrix.F90bld/namelist_files/use_cases/2000_cam6.xmlbld/namelist_files/use_cases/waccm_sc_hist_cam6.xmlbld/build-namelistsrc/chemistry/pp_waccm_sc_mam4/chem_mech.docsrc/chemistry/pp_waccm_sc_mam4/chem_mech.insrc/chemistry/pp_waccm_sc_mam4/mo_lu_factor.F90bld/namelist_files/use_cases/1850_cam6.xmlsrc/chemistry/pp_waccm_sc_mam4/mo_lin_matrix.F90src/chemistry/pp_waccm_sc_mam4/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_sc_mam4/mo_nln_matrix.F90src/chemistry/pp_trop_mam4/mo_sim_dat.F90src/chemistry/pp_waccm_sc_mam4/m_rxt_id.F90src/chemistry/pp_trop_mam4/mo_rxt_rates_conv.F90bld/namelist_files/use_cases/waccm_sc_2010_cam6.xmlsrc/chemistry/pp_trop_mam4/mo_lu_factor.F90src/chemistry/pp_waccm_sc_mam4/mo_lu_solve.F90src/chemistry/pp_trop_mam4/mo_setrxt.F90src/chemistry/pp_waccm_sc_mam4/mo_setrxt.F9085b005ee13ceac789486209bd642c724b6a7f4621671125492000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate trop_mam4 and waccm_sc_mam4 mechanisms (from chem Cafe) modified: bld/build-namelist modified: bld/namelist_files/use_cases/1850_cam6.xml modified: bld/namelist_files/use_cases/2000_cam6.xml modified: bld/namelist_files/use_cases/2010_cam6.xml modified: bld/namelist_files/use_cases/waccm_sc_1850_cam6.xml modified: bld/namelist_files/use_cases/waccm_sc_2000_cam6.xml modified: bld/namelist_files/use_cases/waccm_sc_2010_cam6.xml modified: bld/namelist_files/use_cases/waccm_sc_hist_cam6.xml modified: src/chemistry/pp_trop_mam4/chem_mech.doc modified: src/chemistry/pp_trop_mam4/chem_mech.in modified: src/chemistry/pp_trop_mam4/m_rxt_id.F90 modified: src/chemistry/pp_trop_mam4/m_spc_id.F90 modified: src/chemistry/pp_trop_mam4/mo_adjrxt.F90 modified: src/chemistry/pp_trop_mam4/mo_lin_matrix.F90 modified: src/chemistry/pp_trop_mam4/mo_lu_factor.F90 modified: src/chemistry/pp_trop_mam4/mo_lu_solve.F90 modified: src/chemistry/pp_trop_mam4/mo_nln_matrix.F90 modified: src/chemistry/pp_trop_mam4/mo_prod_loss.F90 modified: src/chemistry/pp_trop_mam4/mo_rxt_rates_conv.F90 modified: src/chemistry/pp_trop_mam4/mo_setrxt.F90 modified: src/chemistry/pp_trop_mam4/mo_sim_dat.F90 modified: src/chemistry/pp_waccm_sc_mam4/chem_mech.doc modified: src/chemistry/pp_waccm_sc_mam4/chem_mech.in modified: src/chemistry/pp_waccm_sc_mam4/chem_mods.F90 modified: src/chemistry/pp_waccm_sc_mam4/m_rxt_id.F90 modified: src/chemistry/pp_waccm_sc_mam4/m_spc_id.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_adjrxt.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_indprd.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_lin_matrix.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_lu_factor.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_lu_solve.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_nln_matrix.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_prod_loss.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_rxt_rates_conv.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_setrxt.F90 modified: src/chemistry/pp_waccm_sc_mam4/mo_sim_dat.F90 2022-12-15 10:31:32 -070085b005ee13ceac789486209bd642c724b6a7f462update trop_mam4 and waccm_sc_mam4 mechanisms (from chem Cafe)editsrc/chemistry/pp_trop_mam4/mo_adjrxt.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_prod_loss.F90editbld/namelist_files/use_cases/1850_cam6.xmleditsrc/chemistry/pp_waccm_sc_mam4/chem_mods.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_lin_matrix.F90editsrc/chemistry/pp_trop_mam4/mo_lu_solve.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_rxt_rates_conv.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_nln_matrix.F90editsrc/chemistry/pp_trop_mam4/chem_mech.doceditsrc/chemistry/pp_waccm_sc_mam4/mo_adjrxt.F90editsrc/chemistry/pp_waccm_sc_mam4/chem_mech.doceditsrc/chemistry/pp_waccm_sc_mam4/m_rxt_id.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_indprd.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_setrxt.F90editsrc/chemistry/pp_trop_mam4/chem_mech.ineditsrc/chemistry/pp_trop_mam4/mo_prod_loss.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_lu_solve.F90editsrc/chemistry/pp_trop_mam4/m_spc_id.F90editsrc/chemistry/pp_trop_mam4/mo_rxt_rates_conv.F90editsrc/chemistry/pp_trop_mam4/mo_nln_matrix.F90editbld/namelist_files/use_cases/waccm_sc_2000_cam6.xmleditsrc/chemistry/pp_trop_mam4/mo_setrxt.F90editbld/namelist_files/use_cases/2000_cam6.xmleditbld/namelist_files/use_cases/2010_cam6.xmleditbld/namelist_files/use_cases/waccm_sc_hist_cam6.xmleditsrc/chemistry/pp_trop_mam4/mo_sim_dat.F90editsrc/chemistry/pp_trop_mam4/m_rxt_id.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_sim_dat.F90editsrc/chemistry/pp_waccm_sc_mam4/chem_mech.ineditsrc/chemistry/pp_trop_mam4/mo_lu_factor.F90editsrc/chemistry/pp_waccm_sc_mam4/mo_lu_factor.F90editbld/namelist_files/use_cases/waccm_sc_2010_cam6.xmleditsrc/chemistry/pp_waccm_sc_mam4/m_spc_id.F90editbld/build-namelisteditbld/namelist_files/use_cases/waccm_sc_1850_cam6.xmleditsrc/chemistry/pp_trop_mam4/mo_lin_matrix.F90bld/namelist_files/namelist_definition.xmlbld/namelist_files/use_cases/aquaplanet_cam4.xmlbld/namelist_files/use_cases/aquaplanet_cam3.xmlbld/namelist_files/use_cases/waccm_carma_bc_2013_cam4.xmlbld/namelist_files/use_cases/1850-2005_cam5.xmlbld/namelist_files/use_cases/sd_waccm_sulfur.xml7c82ef62094380136674f4ac3628b286598b13571671129563000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduremoved sst settings that should only be in docn 2022-12-15 11:39:23 -07007c82ef62094380136674f4ac3628b286598b1357removed sst settings that should only be in docneditbld/namelist_files/namelist_definition.xmleditbld/namelist_files/use_cases/aquaplanet_cam3.xmleditbld/namelist_files/use_cases/waccm_carma_bc_2013_cam4.xmleditbld/namelist_files/use_cases/sd_waccm_sulfur.xmleditbld/namelist_files/use_cases/aquaplanet_cam4.xmleditbld/namelist_files/use_cases/1850-2005_cam5.xmldoc/ChangeLog1f247d5bda5391797f144a39e2db36a9e8ded45a1671138453000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog 1st draft 2022-12-15 14:07:33 -07001f247d5bda5391797f144a39e2db36a9e8ded45aChangeLog 1st drafteditdoc/ChangeLogExternals.cfg38e7555d5a5879f6f9ad0f251515989713c7d5731671141180000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse share1.0.16 external 2022-12-15 14:53:00 -070038e7555d5a5879f6f9ad0f251515989713c7d573use share1.0.16 externaleditExternals.cfgbld/namelist_files/namelist_definition.xmlbld/namelist_files/namelist_defaults_cam.xmle0c3c7cea11bfc70512323278bff6bd775c3f0001671144608000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduReview comments, remove Default notes from namelist_definition 2022-12-15 15:50:08 -0700e0c3c7cea11bfc70512323278bff6bd775c3f000Review comments, remove Default notes from namelist_definitioneditbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/namelist_definition.xmlbld/namelist_files/namelist_definition.xmla25c43c3ed8f926c50dcac9c80a4585d588f04321671146114000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduSuggested documentation updates from review 2022-12-15 16:15:14 -0700a25c43c3ed8f926c50dcac9c80a4585d588f0432Suggested documentation updates from revieweditbld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F90a886af15fa61ea958fd16364aabfb65f0d2842cb1671147691000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdded warning lables to clubb_tend variables dimensioned NCOLS or PCOLS 2022-12-15 16:41:31 -0700a886af15fa61ea958fd16364aabfb65f0d2842cbAdded warning lables to clubb_tend variables dimensioned NCOLS or PCOLSeditsrc/physics/cam/clubb_intr.F90src/dynamics/fv3/dp_coupling.F90src/dynamics/mpas/dp_coupling.F90src/dynamics/fv/dp_coupling.F90src/physics/cam/geopotential.F90src/dynamics/eul/dp_coupling.F90src/dynamics/mpas/dycore_budget.F90src/dynamics/se/dp_coupling.F90src/physics/cam/check_energy.F90src/physics/cam/physics_types.F9064aefc11ccbf1b73ffc1d97b1513c33574e33d401671200351000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduswitch to generalized virtual temperature (closes MPAS energy budget) 2022-12-16 07:19:11 -070064aefc11ccbf1b73ffc1d97b1513c33574e33d40switch to generalized virtual temperature (closes MPAS energy budget)editsrc/dynamics/fv/dp_coupling.F90editsrc/physics/cam/physics_types.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/physics/cam/check_energy.F90editsrc/physics/cam/geopotential.F90editsrc/dynamics/eul/dp_coupling.F90editsrc/dynamics/fv3/dp_coupling.F90editsrc/dynamics/se/dp_coupling.F90doc/ChangeLog5dff4ab3eff0029e612907dec5b0f9520595c7d61671202930000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2022-12-16 08:02:10 -07005dff4ab3eff0029e612907dec5b0f9520595c7d6ChangeLog updateeditdoc/ChangeLogsrc/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/mpas/dp_coupling.F90src/physics/cam/check_energy.F90edfba48b30fe9af32ad50a42c3fc5844584b152c1671223587000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduupdate budget/state indexes 2022-12-16 13:46:27 -0700edfba48b30fe9af32ad50a42c3fc5844584b152cupdate budget/state indexeseditsrc/dynamics/mpas/dp_coupling.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/physics/cam/check_energy.F90src/dynamics/mpas/dycore_budget.F90de1b3f3a1d94a25af4505272e0e8683aacca60a41671232397000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduimprove log file output for MPAS 2022-12-16 16:13:17 -0700de1b3f3a1d94a25af4505272e0e8683aacca60a4improve log file output for MPASeditsrc/dynamics/mpas/dycore_budget.F90src/physics/cam/geopotential.F90src/physics/cam/physics_types.F9092f0860a86da452a2ec284ac8996e40da44f19231671232419000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduremove unused option (energy conserving dry-mass adjustment) 2022-12-16 16:13:39 -070092f0860a86da452a2ec284ac8996e40da44f1923remove unused option (energy conserving dry-mass adjustment)editsrc/physics/cam/geopotential.F90editsrc/physics/cam/physics_types.F90Externals.cfg6241af8cf12c4f3fd320c6d525639d2a7c4d78cf1671564494000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate externals to match cesm2_3_alpha11a - more or less 2022-12-20 12:28:14 -07006241af8cf12c4f3fd320c6d525639d2a7c4d78cfUpdate externals to match cesm2_3_alpha11a - more or lesseditExternals.cfgsrc/physics/cam/clubb_intr.F903ea4b6a86e21959dc97f5ba787d3679e1bb3b8961671575237000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduA few more review comments 2022-12-20 15:27:17 -07003ea4b6a86e21959dc97f5ba787d3679e1bb3b896A few more review commentseditsrc/physics/cam/clubb_intr.F90cime_config/testdefs/testmods_dirs/cam/dartcambigens/shell_commandscime_config/testdefs/testmods_dirs/cam/carma_sea_salt/shell_commands765b23f1d642c44fccb14ab0ac50199a616d74b61671580867000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd xmlchange commands for NCPL to fix a couple of failing tests 2022-12-20 17:01:07 -0700765b23f1d642c44fccb14ab0ac50199a616d74b6Add xmlchange commands for NCPL to fix a couple of failing testseditcime_config/testdefs/testmods_dirs/cam/dartcambigens/shell_commandseditcime_config/testdefs/testmods_dirs/cam/carma_sea_salt/shell_commandssrc/chemistry/pp_waccm_tsmlt_mam4/mo_setrxt.F90src/chemistry/pp_waccm_tsmlt_mam4/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam4_vbsext/mo_lu_factor.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam4_vbsext/mo_adjrxt.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_adjrxt.F90src/chemistry/pp_trop_strat_mam4_vbs/chem_mods.F90src/chemistry/pp_waccm_mad_mam4/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_mad_mam4/mo_imp_sol.F90src/chemistry/pp_waccm_mad_mam4/chem_mods.F90src/chemistry/pp_waccm_mad_mam4/m_rxt_id.F90src/chemistry/pp_waccm_ma_mam4/mo_nln_matrix.F90src/chemistry/pp_trop_strat_mam4_vbsext/chem_mech.insrc/chemistry/pp_waccm_ma_mam4/chem_mech.insrc/chemistry/pp_waccm_ma_mam4/chem_mech.docsrc/chemistry/pp_trop_strat_mam4_vbsext/chem_mods.F90src/chemistry/pp_waccm_ma_mam4/mo_lin_matrix.F90src/chemistry/pp_trop_strat_mam4_vbsext/m_rxt_id.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_indprd.F90src/chemistry/pp_waccm_mad_mam4/mo_lu_factor.F90src/chemistry/pp_waccm_ma_mam4/m_rxt_id.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam4_vbsext/mo_lin_matrix.F90src/chemistry/pp_waccm_mad_mam4/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam4_ts2/chem_mech.docsrc/chemistry/pp_waccm_mad_mam4/mo_setrxt.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_mad_mam4/mo_lin_matrix.F90src/chemistry/pp_trop_strat_mam4_vbsext/m_spc_id.F90src/chemistry/pp_waccm_tsmlt_mam4/mo_lu_factor.F90src/chemistry/pp_waccm_mad_mam4/chem_mech.insrc/chemistry/pp_trop_strat_mam4_vbsext/mo_nln_matrix.F90src/chemistry/mozart/mo_sad.F90src/chemistry/pp_waccm_mad_mam4/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam4_vbsext/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam4_ts2/m_rxt_id.F90src/chemistry/pp_waccm_mad_mam4/mo_adjrxt.F90bld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/pp_waccm_ma_mam4/mo_adjrxt.F90src/chemistry/pp_waccm_ma_mam4/chem_mods.F90src/chemistry/pp_trop_strat_mam4_vbsext/mo_setrxt.F90src/chemistry/pp_waccm_mad_mam4/mo_exp_sol.F90src/chemistry/pp_waccm_tsmlt_mam4/mo_adjrxt.F90src/chemistry/pp_waccm_tsmlt_mam4/chem_mods.F90src/chemistry/pp_trop_strat_mam4_vbs/chem_mech.docsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam4_ts2/chem_mech.insrc/chemistry/pp_waccm_ma_mam4/mo_lu_factor.F90src/chemistry/pp_waccm_tsmlt_mam4/m_rxt_id.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_indprd.F90src/chemistry/pp_waccm_ma_mam4/mo_indprd.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_rxt_rates_conv.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_lu_factor.F90src/chemistry/pp_waccm_tsmlt_mam4/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_lin_matrix.F90src/chemistry/pp_trop_strat_mam4_vbs/chem_mech.insrc/chemistry/pp_waccm_tsmlt_mam4/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_adjrxt.F90src/chemistry/pp_trop_mozart/mo_adjrxt.F90src/chemistry/pp_waccm_tsmlt_mam4/chem_mech.insrc/chemistry/pp_trop_strat_mam4_ts2/chem_mods.F90src/chemistry/pp_waccm_ma_mam4/mo_setrxt.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_nln_matrix.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_nln_matrix.F90src/chemistry/pp_trop_strat_mam4_vbsext/mo_indprd.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_prod_loss.F90src/chemistry/pp_waccm_tsmlt_mam4/chem_mech.docsrc/chemistry/pp_trop_strat_mam4_ts2/mo_lin_matrix.F90src/chemistry/pp_waccm_tsmlt_mam4/mo_nln_matrix.F90src/chemistry/pp_waccm_tsmlt_mam4/mo_lin_matrix.F90src/chemistry/pp_waccm_tsmlt_mam4/m_spc_id.F90src/chemistry/pp_waccm_mad_mam4/mo_nln_matrix.F90src/chemistry/pp_waccm_ma_mam4/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_lu_factor.F90src/chemistry/pp_waccm_mad_mam4/mo_indprd.F90src/chemistry/pp_waccm_tsmlt_mam4/mo_rxt_rates_conv.F90src/chemistry/pp_trop_strat_mam4_vbs/m_rxt_id.F90src/chemistry/pp_waccm_mad_mam4/chem_mech.docsrc/chemistry/pp_waccm_mad_mam4/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam4_vbsext/mo_rxt_rates_conv.F90src/chemistry/pp_trop_strat_mam4_vbsext/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam4_vbsext/chem_mech.docsrc/chemistry/pp_waccm_ma_sulfur/mo_adjrxt.F90src/chemistry/mozart/mo_usrrxt.F90src/chemistry/pp_waccm_tsmlt_mam4/mo_indprd.F90src/chemistry/pp_trop_strat_mam4_vbs/mo_setrxt.F90src/chemistry/pp_waccm_ma_mam4/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_ma_mam4/mo_lu_solve.F90src/chemistry/pp_waccm_ma_mam4/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_setrxt.F906482489e40389c54f9ea341f801a1547dff9ca9f1671636221000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edu1st round of mechanism updates modified: bld/namelist_files/namelist_defaults_cam.xml modified: src/chemistry/mozart/mo_sad.F90 modified: src/chemistry/mozart/mo_usrrxt.F90 modified: src/chemistry/pp_trop_strat_mam4_ts2/chem_mech.in modified: src/chemistry/pp_trop_strat_mam4_vbs/chem_mech.in modified: src/chemistry/pp_trop_strat_mam4_vbsext/chem_mech.in modified: src/chemistry/pp_waccm_ma_mam4/chem_mech.in modified: src/chemistry/pp_waccm_mad_mam4/chem_mech.in modified: src/chemistry/pp_waccm_tsmlt_mam4/chem_mech.in 2022-12-21 08:23:41 -07006482489e40389c54f9ea341f801a1547dff9ca9f1st round of mechanism updateseditsrc/chemistry/pp_waccm_mad_mam4/mo_prod_loss.F90editsrc/chemistry/pp_waccm_mad_mam4/chem_mech.ineditsrc/chemistry/pp_trop_strat_mam4_vbsext/m_rxt_id.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/mo_setrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/chem_mech.doceditsrc/chemistry/pp_trop_strat_mam4_ts2/mo_prod_loss.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/chem_mods.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_lu_solve.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_lu_solve.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/chem_mech.ineditsrc/chemistry/pp_trop_strat_mam4_vbsext/chem_mech.ineditsrc/chemistry/pp_trop_strat_mam4_ts2/chem_mech.doceditsrc/chemistry/pp_trop_strat_mam4_vbs/mo_indprd.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_lu_factor.F90editsrc/chemistry/pp_waccm_ma_mam4/m_rxt_id.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_sim_dat.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_nln_matrix.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_adjrxt.F90editsrc/chemistry/pp_waccm_ma_mam4/chem_mods.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_adjrxt.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/mo_sim_dat.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_lin_matrix.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_adjrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_setrxt.F90editsrc/chemistry/pp_waccm_ma_sulfur/mo_adjrxt.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_indprd.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_sim_dat.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_indprd.F90editbld/namelist_files/namelist_defaults_cam.xmleditsrc/chemistry/pp_waccm_tsmlt_mam4/mo_lin_matrix.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_imp_sol.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/m_spc_id.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_exp_sol.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/chem_mods.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_adjrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/m_rxt_id.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_rxt_rates_conv.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_indprd.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_nln_matrix.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/mo_nln_matrix.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/m_rxt_id.F90editsrc/chemistry/pp_waccm_ma_mam4/chem_mech.doceditsrc/chemistry/pp_waccm_tsmlt_mam4/mo_indprd.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_rxt_rates_conv.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_lu_factor.F90editsrc/chemistry/pp_waccm_mad_mam4/chem_mech.doceditsrc/chemistry/pp_waccm_mad_mam4/chem_mods.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_nln_matrix.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_setrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_lin_matrix.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_adjrxt.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/mo_adjrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/chem_mods.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_sim_dat.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_lin_matrix.F90editsrc/chemistry/pp_trop_mozart/mo_adjrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/m_spc_id.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_lin_matrix.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/mo_rxt_rates_conv.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/chem_mech.ineditsrc/chemistry/pp_trop_strat_mam4_ts2/m_rxt_id.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_indprd.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_prod_loss.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_lu_solve.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_lu_factor.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/mo_lu_factor.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/chem_mech.doceditsrc/chemistry/pp_waccm_tsmlt_mam4/mo_lu_solve.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_sim_dat.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_rxt_rates_conv.F90editsrc/chemistry/pp_waccm_ma_mam4/chem_mech.ineditsrc/chemistry/mozart/mo_usrrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_lu_factor.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_lu_solve.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/chem_mech.doceditsrc/chemistry/pp_trop_strat_mam4_ts2/mo_setrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbsext/mo_prod_loss.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_setrxt.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_prod_loss.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/mo_prod_loss.F90editsrc/chemistry/pp_waccm_tsmlt_mam4/chem_mech.ineditsrc/chemistry/pp_trop_strat_mam4_vbs/chem_mods.F90editsrc/chemistry/mozart/mo_sad.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_sim_dat.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_lin_matrix.F90editsrc/chemistry/pp_waccm_ma_mam4/mo_setrxt.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_rxt_rates_conv.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_rxt_rates_conv.F90editsrc/chemistry/pp_trop_strat_mam4_vbs/mo_nln_matrix.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_nln_matrix.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_lu_factor.F90editsrc/chemistry/pp_waccm_mad_mam4/m_rxt_id.F90editsrc/chemistry/pp_waccm_mad_mam4/mo_lu_solve.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_apmee/shell_commandsb9969138b210482543eb002408f9bc7a18b7898c1671642825000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd xmlchange commands for NCPL to fix a failing cheyenne test 2022-12-21 10:13:45 -0700b9969138b210482543eb002408f9bc7a18b7898cAdd xmlchange commands for NCPL to fix a failing cheyenne testaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_apmee/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/shell_commandsae5090475d6980da24c80c775019ffdd7695873f1671643330000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd xmlchange commands for NCPL to fix a failing gnu test 2022-12-21 10:22:10 -0700ae5090475d6980da24c80c775019ffdd7695873fAdd xmlchange commands for NCPL to fix a failing gnu testeditcime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/shell_commandscime_config/testdefs/testlist_cam.xmlcime_config/config_component.xmlsrc/chemistry/pp_trop_mam5/mo_lu_factor.F90src/chemistry/pp_trop_mam5/mo_phtadj.F90bld/configurecime_config/config_compsets.xmlbld/config_files/definition.xmlsrc/chemistry/pp_trop_mam5/mo_lu_solve.F90src/chemistry/pp_trop_mam5/mo_prod_loss.F90src/chemistry/pp_trop_mam5/mo_nln_matrix.F90src/chemistry/pp_trop_mam5/m_spc_id.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/pp_trop_mam5/chem_mech.insrc/chemistry/pp_trop_mam5/m_rxt_id.F90src/chemistry/pp_trop_mam5/mo_setrxt.F90src/chemistry/pp_trop_mam5/mo_imp_sol.F90src/chemistry/pp_trop_mam5/mo_rxt_rates_conv.F90bld/build-namelistsrc/chemistry/pp_trop_mam5/chem_mech.docsrc/chemistry/pp_trop_mam5/mo_lin_matrix.F90src/chemistry/pp_trop_mam5/mo_exp_sol.F90src/chemistry/pp_trop_mam5/mo_indprd.F90src/chemistry/pp_trop_mam5/mo_sim_dat.F90src/chemistry/pp_trop_mam5/mo_adjrxt.F90src/chemistry/pp_trop_mam5/chem_mods.F90e6778c0ed0d973d5aa1ff181993f58ddc20e9dae1671646707000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove trop_mam5 mechanism deleted: src/chemistry/pp_trop_mam5 modified: bld/build-namelist modified: bld/config_files/definition.xml modified: bld/configure modified: bld/namelist_files/namelist_definition.xml modified: cime_config/config_component.xml modified: cime_config/config_compsets.xml modified: cime_config/testdefs/testlist_cam.xml 2022-12-21 11:18:27 -0700e6778c0ed0d973d5aa1ff181993f58ddc20e9daeremove trop_mam5 mechanismdeletesrc/chemistry/pp_trop_mam5/mo_rxt_rates_conv.F90deletesrc/chemistry/pp_trop_mam5/mo_exp_sol.F90editcime_config/testdefs/testlist_cam.xmldeletesrc/chemistry/pp_trop_mam5/mo_indprd.F90deletesrc/chemistry/pp_trop_mam5/mo_sim_dat.F90deletesrc/chemistry/pp_trop_mam5/mo_setrxt.F90deletesrc/chemistry/pp_trop_mam5/mo_adjrxt.F90deletesrc/chemistry/pp_trop_mam5/mo_phtadj.F90editcime_config/config_component.xmldeletesrc/chemistry/pp_trop_mam5/m_spc_id.F90deletesrc/chemistry/pp_trop_mam5/m_rxt_id.F90deletesrc/chemistry/pp_trop_mam5/chem_mods.F90editbld/configuredeletesrc/chemistry/pp_trop_mam5/mo_imp_sol.F90deletesrc/chemistry/pp_trop_mam5/mo_lu_factor.F90deletesrc/chemistry/pp_trop_mam5/mo_nln_matrix.F90deletesrc/chemistry/pp_trop_mam5/mo_lu_solve.F90editcime_config/config_compsets.xmleditbld/namelist_files/namelist_definition.xmleditbld/build-namelistdeletesrc/chemistry/pp_trop_mam5/mo_lin_matrix.F90editbld/config_files/definition.xmldeletesrc/chemistry/pp_trop_mam5/chem_mech.docdeletesrc/chemistry/pp_trop_mam5/mo_prod_loss.F90deletesrc/chemistry/pp_trop_mam5/chem_mech.insrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/hetfrz_classnuc_cam.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F9096f5701ffda7f727b4613ffa0dc75e59d60ab4571671647508000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edusome of the changes suggested by matt modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-12-21 11:31:48 -070096f5701ffda7f727b4613ffa0dc75e59d60ab457some of the changes suggested by matteditsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_mee_fluxes/shell_commands4521684efab3a7020f16bea6d8c473e2ec11b52b1671648944000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix one more failing cheyenne test 2022-12-21 11:55:44 -07004521684efab3a7020f16bea6d8c473e2ec11b52bFix one more failing cheyenne testeditcime_config/testdefs/testmods_dirs/cam/outfrq9s_mee_fluxes/shell_commandsdoc/ChangeLog1554dc028772f383c64ae27ef14ccac06039020f1671657031000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_088 2022-12-21 14:10:31 -07001554dc028772f383c64ae27ef14ccac06039020fUpdate ChangeLog for cam6_3_088editdoc/ChangeLogsrc/physics/cam/phys_grid_ctem.F903d9d37d8db6dc16a07a8043b70f23ff50ab26e531671661423000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduRemove vertical interpolation onto layer interfaces modified: src/physics/cam/phys_grid_ctem.F90 2022-12-21 15:23:43 -07003d9d37d8db6dc16a07a8043b70f23ff50ab26e53Remove vertical interpolation onto layer interfaceseditsrc/physics/cam/phys_grid_ctem.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_nln_matrix.F90src/chemistry/pp_waccm_tsmlt_mam5/m_rxt_id.F90src/chemistry/pp_waccm_tsmlt_mam5/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_rxt_rates_conv.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_setrxt.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_sim_dat.F90src/chemistry/pp_waccm_tsmlt_mam5/mo_indprd.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_lu_factor.F90src/chemistry/pp_trop_strat_mam4_ts2/chem_mods.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_indprd.F90src/chemistry/pp_trop_strat_mam5_vbs/m_rxt_id.F90src/chemistry/pp_waccm_tsmlt_mam5/m_spc_id.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_prod_loss.F90src/chemistry/pp_waccm_ma_mam5/chem_mech.insrc/chemistry/pp_waccm_tsmlt_mam5/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_lin_matrix.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_sim_dat.F90src/chemistry/pp_waccm_tsmlt_mam5/chem_mech.insrc/chemistry/pp_waccm_tsmlt_mam5/mo_adjrxt.F90src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.insrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_solve.F90src/chemistry/pp_waccm_tsmlt_mam5/chem_mods.F90src/chemistry/pp_waccm_tsmlt_mam5/mo_nln_matrix.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_prod_loss.F90src/chemistry/pp_waccm_mad_mam5/chem_mech.insrc/chemistry/pp_trop_strat_mam5_vbsext/chem_mech.insrc/chemistry/pp_trop_strat_mam5_vbs/chem_mods.F90src/chemistry/pp_trop_strat_mam4_ts2/chem_mech.docsrc/chemistry/pp_waccm_tsmlt_mam5/mo_lin_matrix.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_adjrxt.F90src/chemistry/pp_waccm_tsmlt_mam5/mo_rxt_rates_conv.F90src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.docsrc/chemistry/pp_waccm_tsmlt_mam5/chem_mech.docsrc/chemistry/pp_trop_strat_mam5_ts2/chem_mech.insrc/chemistry/pp_trop_strat_mam4_ts2/m_rxt_id.F90src/chemistry/pp_waccm_tsmlt_mam5/mo_lu_factor.F90src/chemistry/pp_trop_strat_mam4_ts2/mo_setrxt.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_rxt_rates_conv.F90src/chemistry/pp_trop_strat_mam4_ts2/chem_mech.insrc/chemistry/pp_waccm_tsmlt_mam5/mo_setrxt.F90src/chemistry/pp_waccm_tsmlt_mam5/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_lin_matrix.F904a2a776fe70605a8af47c9093a490a41211b4bd71671662898000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore mechanism updates (include mam5 mechanisms) new file: src/chemistry/pp_trop_strat_mam5_ts2/chem_mech.in new file: src/chemistry/pp_trop_strat_mam5_vbsext/chem_mech.in new file: src/chemistry/pp_waccm_ma_mam5/chem_mech.in new file: src/chemistry/pp_waccm_mad_mam5/chem_mech.in modified: src/chemistry/pp_trop_strat_mam4_ts2/chem_mech.in modified: src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.in modified: src/chemistry/pp_waccm_tsmlt_mam5/chem_mech.in 2022-12-21 15:48:18 -07004a2a776fe70605a8af47c9093a490a41211b4bd7more mechanism updates (include mam5 mechanisms)editsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_solve.F90addsrc/chemistry/pp_waccm_mad_mam5/chem_mech.ineditsrc/chemistry/pp_waccm_tsmlt_mam5/mo_indprd.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/m_rxt_id.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/chem_mech.doceditsrc/chemistry/pp_trop_strat_mam4_ts2/mo_setrxt.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/chem_mech.ineditsrc/chemistry/pp_waccm_tsmlt_mam5/mo_lin_matrix.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/m_rxt_id.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/m_spc_id.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/mo_nln_matrix.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/m_rxt_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/chem_mech.ineditsrc/chemistry/pp_trop_strat_mam4_ts2/mo_rxt_rates_conv.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_lin_matrix.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/mo_adjrxt.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/mo_setrxt.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/chem_mods.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_factor.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/chem_mech.ineditsrc/chemistry/pp_trop_strat_mam4_ts2/mo_sim_dat.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mods.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/mo_lu_solve.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mech.ineditsrc/chemistry/pp_trop_strat_mam5_vbs/mo_nln_matrix.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/mo_lu_factor.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/chem_mech.doceditsrc/chemistry/pp_trop_strat_mam5_vbs/mo_prod_loss.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/mo_rxt_rates_conv.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mech.doceditsrc/chemistry/pp_trop_strat_mam5_vbs/mo_setrxt.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/mo_prod_loss.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/mo_rxt_rates_conv.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/mo_prod_loss.F90editsrc/chemistry/pp_trop_strat_mam4_ts2/chem_mods.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/mo_adjrxt.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/mo_indprd.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/mo_sim_dat.F90editsrc/chemistry/pp_waccm_tsmlt_mam5/chem_mech.ineditsrc/chemistry/pp_waccm_tsmlt_mam5/mo_sim_dat.F90editsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lin_matrix.F90addsrc/chemistry/pp_waccm_ma_mam5/chem_mech.insrc/physics/cam/hetfrz_classnuc_cam.F9045c2952047f31d398df6fc0a1fd6e78b70bf8e1d1672247930000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edunag cleanup 2022-12-28 10:18:50 -070045c2952047f31d398df6fc0a1fd6e78b70bf8e1dnag cleanupeditsrc/physics/cam/hetfrz_classnuc_cam.F90bld/namelist_files/namelist_definition.xmlsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc_cam.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90bea9011fa0d41adf572097c9b6d093e66576d4f81672260160000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement het frz scaling factors; get hygro factors from aero_props; use physconst params modified: bld/namelist_files/namelist_definition.xml modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2022-12-28 13:42:40 -0700bea9011fa0d41adf572097c9b6d093e66576d4f8implement het frz scaling factors; get hygro factors from aero_props; use physconst paramseditsrc/physics/cam/hetfrz_classnuc.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90editbld/namelist_files/namelist_definition.xmleditsrc/chemistry/aerosol/aerosol_state_mod.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_lu_factor.F90src/chemistry/pp_waccm_ma_mam5/mo_phtadj.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_indprd.F90cime_config/config_component.xmlsrc/chemistry/pp_trop_strat_mam5_ts2/m_rxt_id.F90src/chemistry/pp_waccm_ma_mam5/mo_nln_matrix.F90src/chemistry/pp_waccm_ma_mam5/m_spc_id.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_setrxt.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_lu_solve.F90src/chemistry/pp_waccm_mad_mam5/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_lu_factor.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_imp_sol.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_prod_loss.F90src/chemistry/pp_waccm_ma_mam5/mo_indprd.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/chem_mech.insrc/chemistry/pp_waccm_mad_mam5/chem_mods.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_imp_sol.F90src/chemistry/pp_waccm_ma_mam5/mo_prod_loss.F90src/chemistry/pp_waccm_mad_mam5/mo_lu_factor.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_lu_factor.F90src/chemistry/pp_waccm_ma_mam5/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_sim_dat.F90src/chemistry/pp_waccm_mad_mam5/mo_adjrxt.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_nln_matrix.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_prod_loss.F90src/chemistry/pp_waccm_mad_mam5/mo_lin_matrix.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/chem_mech.insrc/chemistry/pp_waccm_mad_mam5/mo_imp_sol.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_phtadj.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_phtadj.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_setrxt.F90src/chemistry/pp_trop_strat_mam5_ts2/chem_mods.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_lin_matrix.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_exp_sol.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_adjrxt.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/chem_mech.docsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_indprd.F90src/chemistry/pp_waccm_mad_mam5/m_rxt_id.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_lu_factor.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/chem_mods.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_lu_solve.F90src/chemistry/pp_waccm_mad_mam5/chem_mech.docsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_phtadj.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam5_ts2/chem_mech.docsrc/chemistry/pp_waccm_mad_mam5/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_imp_sol.F90src/chemistry/pp_waccm_mad_mam5/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_exp_sol.F90src/chemistry/pp_waccm_mad_mam5/mo_lu_solve.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_nln_matrix.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/chem_mech.docsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_nln_matrix.F90src/chemistry/pp_waccm_ma_mam5/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_lin_matrix.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_lu_solve.F90src/chemistry/pp_waccm_ma_mam5/mo_setrxt.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_setrxt.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/m_spc_id.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_indprd.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_sim_dat.F90src/chemistry/pp_waccm_ma_mam5/mo_lin_matrix.F90src/chemistry/pp_trop_strat_mam5_vbsext/m_spc_id.F90src/chemistry/pp_waccm_mad_mam5/mo_setrxt.F90cime_config/config_compsets.xmlbld/config_files/definition.xmlsrc/chemistry/pp_waccm_mad_mam5/mo_indprd.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/m_rxt_id.F90src/chemistry/pp_waccm_mad_mam5/mo_exp_sol.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam5_vbsext/chem_mech.docsrc/chemistry/pp_waccm_ma_mam5/mo_adjrxt.F90src/chemistry/pp_waccm_ma_mam5/chem_mods.F90src/chemistry/pp_waccm_ma_mam5/chem_mech.docsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_phtadj.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_lin_matrix.F90src/chemistry/pp_waccm_ma_mam5/mo_imp_sol.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_exp_sol.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_exp_sol.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_setrxt.F90src/chemistry/pp_waccm_mad_mam5/mo_nln_matrix.F90src/chemistry/pp_trop_strat_mam5_vbsext/mo_adjrxt.F90src/chemistry/pp_trop_strat_mam5_vbsext/chem_mods.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/m_rxt_id.F90src/chemistry/pp_waccm_mad_mam5/mo_phtadj.F90src/chemistry/pp_waccm_ma_mam5/mo_exp_sol.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/m_spc_id.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_nln_matrix.F90cime_config/testdefs/testlist_cam.xmlsrc/chemistry/pp_trop_strat_mam5_ts2/mo_adjrxt.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_lin_matrix.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/chem_mods.F90src/chemistry/pp_trop_strat_mam5_ts2/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_adjrxt.F90src/chemistry/pp_waccm_mad_mam5/m_spc_id.F90src/chemistry/pp_waccm_ma_mam5/m_rxt_id.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_ma_mam5/mo_lu_factor.F90src/chemistry/pp_waccm_ma_mam5/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam5_ts2/m_spc_id.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_imp_sol.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_prod_loss.F90src/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_indprd.F90src/chemistry/pp_trop_strat_mam5_vbsext/m_rxt_id.F90src/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_sim_dat.F909ff9e420d4ae3fc436eabe6e897fdcf8baf3d48f1672500357000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumove camchem and waccm compsets to mam5 modified: bld/config_files/definition.xml modified: cime_config/config_component.xml modified: cime_config/config_compsets.xml modified: cime_config/testdefs/testlist_cam.xml new file: src/chemistry/pp_waccm_tsmlt_mam4_vbsext/chem_mech.in new file: src/chemistry/pp_waccm_tsmlt_mam5_vbsext/chem_mech.in 2022-12-31 08:25:57 -07009ff9e420d4ae3fc436eabe6e897fdcf8baf3d48fmove camchem and waccm compsets to mam5addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_imp_sol.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_adjrxt.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_rxt_rates_conv.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_lu_factor.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_lu_solve.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_phtadj.F90addsrc/chemistry/pp_waccm_ma_mam5/chem_mech.docaddsrc/chemistry/pp_trop_strat_mam5_ts2/chem_mech.docaddsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_lu_factor.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_lin_matrix.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_setrxt.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/chem_mods.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_lin_matrix.F90addsrc/chemistry/pp_waccm_ma_mam5/m_spc_id.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_imp_sol.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_exp_sol.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_rxt_rates_conv.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_lu_solve.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_lu_factor.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_lu_factor.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_prod_loss.F90editcime_config/testdefs/testlist_cam.xmladdsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_rxt_rates_conv.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_adjrxt.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_nln_matrix.F90addsrc/chemistry/pp_waccm_ma_mam5/chem_mods.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/chem_mech.docaddsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_exp_sol.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_prod_loss.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_adjrxt.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_lin_matrix.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_lin_matrix.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_sim_dat.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_nln_matrix.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_phtadj.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/chem_mods.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_prod_loss.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_phtadj.F90addsrc/chemistry/pp_waccm_mad_mam5/chem_mech.docaddsrc/chemistry/pp_waccm_mad_mam5/mo_adjrxt.F90editcime_config/config_compsets.xmladdsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_setrxt.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/m_spc_id.F90addsrc/chemistry/pp_waccm_mad_mam5/m_rxt_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_lu_solve.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_sim_dat.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_indprd.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_rxt_rates_conv.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/m_rxt_id.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_phtadj.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/m_rxt_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_exp_sol.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_rxt_rates_conv.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/m_rxt_id.F90editbld/config_files/definition.xmladdsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_setrxt.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_imp_sol.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_lu_factor.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_lu_solve.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_nln_matrix.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/chem_mech.inaddsrc/chemistry/pp_trop_strat_mam5_ts2/mo_lin_matrix.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_phtadj.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_indprd.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/chem_mods.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_nln_matrix.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/chem_mech.docaddsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_phtadj.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_nln_matrix.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_exp_sol.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_adjrxt.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_setrxt.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_indprd.F90addsrc/chemistry/pp_waccm_mad_mam5/chem_mods.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_sim_dat.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_lu_solve.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_indprd.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/chem_mech.docaddsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_prod_loss.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_imp_sol.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_sim_dat.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_sim_dat.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_prod_loss.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_exp_sol.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_exp_sol.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/mo_setrxt.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/m_spc_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/mo_lu_factor.F90addsrc/chemistry/pp_waccm_ma_mam5/m_rxt_id.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/m_spc_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/chem_mods.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_lu_solve.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_setrxt.F90editcime_config/config_component.xmladdsrc/chemistry/pp_trop_strat_mam5_ts2/mo_imp_sol.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_indprd.F90addsrc/chemistry/pp_waccm_mad_mam5/m_spc_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbsext/m_spc_id.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/chem_mech.inaddsrc/chemistry/pp_trop_strat_mam5_ts2/mo_sim_dat.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_lin_matrix.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_indprd.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_prod_loss.F90addsrc/chemistry/pp_trop_strat_mam5_ts2/m_rxt_id.F90addsrc/chemistry/pp_waccm_tsmlt_mam5_vbsext/mo_nln_matrix.F90addsrc/chemistry/pp_waccm_tsmlt_mam4_vbsext/mo_imp_sol.F90addsrc/chemistry/pp_waccm_ma_mam5/mo_adjrxt.F90addsrc/chemistry/pp_waccm_mad_mam5/mo_rxt_rates_conv.F90bld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmlbld/build-namelistbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmlcime_config/testdefs/testlist_cam.xmlcime_config/config_component.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_cplcime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/shell_commandsbld/namelist_files/use_cases/sd_waccm_tsmlt_cam6.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_wetdep/user_nl_cplcime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_clmbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_cplcime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_cplcime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_cambld/namelist_files/use_cases/sd_waccm_ma_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmlcime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/shell_commands491a8c95a84602bdd784aca2fa954ec37b1142811672766027000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrections to compset and namelist settings modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/use_cases/sd_waccm_ma_cam6.xml modified: bld/namelist_files/use_cases/sd_waccm_tsmlt_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xml modified: cime_config/config_component.xml modified: cime_config/testdefs/testlist_cam.xml deleted: cime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/shell_commands deleted: cime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_cam deleted: cime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_clm deleted: cime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_cpl deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/shell_commands deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_cam deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_clm deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_cpl deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/shell_commands deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_cam deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_clm deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_cpl deleted: cime_config/testdefs/testmods_dirs/cam/outfrq9s_wetdep/user_nl_cpl 2023-01-03 10:13:47 -0700491a8c95a84602bdd784aca2fa954ec37b114281corrections to compset and namelist settingsdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_clmeditbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmldeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_cpldeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_refined_camchem/user_nl_cameditbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmldeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/shell_commandseditbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmleditbld/build-namelistdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_wetdep/user_nl_cpleditbld/namelist_files/use_cases/sd_waccm_ma_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmldeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_f05/user_nl_cpleditbld/namelist_files/use_cases/sd_waccm_tsmlt_cam6.xmleditcime_config/config_component.xmleditcime_config/testdefs/testlist_cam.xmldeletecime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/outfrq1d_refined_camchem/user_nl_cplsrc/physics/cam/phys_grid_ctem.F90b39baa37b245e0a7d15477f1d973827b7a4ae5811672767759000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrection to array ncol extent modified: src/physics/cam/phys_grid_ctem.F90 2023-01-03 10:42:39 -0700b39baa37b245e0a7d15477f1d973827b7a4ae581correction to array ncol extenteditsrc/physics/cam/phys_grid_ctem.F90src/utils/zonal_mean_mod.F90src/physics/cam/phys_grid_ctem.F90d29da6ef5ee496ebf821b059ea07f284079b0f1d1672782278000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduthe majority of Jesse's change requests modified: src/physics/cam/phys_grid_ctem.F90 modified: src/utils/zonal_mean_mod.F90 2023-01-03 14:44:38 -0700d29da6ef5ee496ebf821b059ea07f284079b0f1dthe majority of Jesse's change requestseditsrc/utils/zonal_mean_mod.F90editsrc/physics/cam/phys_grid_ctem.F90bld/namelist_files/namelist_defaults_cam.xmlea06b58b528ceacb3f02a72f148c89cf9163412e1672790309000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurestore trop_mam xs_long_file default modified: bld/namelist_files/namelist_defaults_cam.xml 2023-01-03 16:58:29 -0700ea06b58b528ceacb3f02a72f148c89cf9163412erestore trop_mam xs_long_file defaulteditbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/phys_grid_ctem.F90src/utils/zonal_mean_mod.F90a9a24d7f83d8b5459be90865a384d3dfc359cf161672853670000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore misc changes suggested by Jesse modified: src/physics/cam/phys_grid_ctem.F90 modified: src/utils/zonal_mean_mod.F90 2023-01-04 10:34:30 -0700a9a24d7f83d8b5459be90865a384d3dfc359cf16more misc changes suggested by Jesseeditsrc/physics/cam/phys_grid_ctem.F90editsrc/utils/zonal_mean_mod.F90cime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/shell_commandscime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_clmd22991697d9b1be99d86877006733d19167792ab1672866883000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd regression tests modified: cime_config/testdefs/testlist_cam.xml modified: cime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_cam modified: cime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_clm renamed: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/shell_commands -> cime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/shell_commands renamed: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_cam -> cime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_cam renamed: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_clm -> cime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_clm 2023-01-04 14:14:43 -0700d22991697d9b1be99d86877006733d19167792abadd regression testsdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_clmeditcime_config/testdefs/testlist_cam.xmldeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem/shell_commandssrc/utils/zonal_mean_mod.F902f80ab520be5eaed9974a8a7a69ad45be78aa5af1672870205000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduMisc changes suggested by Jesse modified: src/utils/zonal_mean_mod.F90 2023-01-04 15:10:05 -07002f80ab520be5eaed9974a8a7a69ad45be78aa5afMisc changes suggested by Jesseeditsrc/utils/zonal_mean_mod.F90bld/namelist_files/namelist_definition.xmlbld/build-namelistsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xml9dd39370c5b519804479c6e160c85b9782c0e9401672962964000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduLast minute review changes 2023-01-05 16:56:04 -07009dd39370c5b519804479c6e160c85b9782c0e940Last minute review changeseditsrc/physics/cam/clubb_intr.F90editbld/build-namelisteditbld/namelist_files/namelist_definition.xmleditbld/namelist_files/namelist_defaults_cam.xmlcime_config/testdefs/testlist_cam.xmlsrc/physics/cam/phys_grid_ctem.F908927292dc8c5338162393ef6fb6416aeaf4435d31673045981000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate to history fields; move mpas tem test to prealpha modified: cime_config/testdefs/testlist_cam.xml modified: src/physics/cam/phys_grid_ctem.F90 2023-01-06 15:59:41 -07008927292dc8c5338162393ef6fb6416aeaf4435d3update to history fields; move mpas tem test to prealphaeditcime_config/testdefs/testlist_cam.xmleditsrc/physics/cam/phys_grid_ctem.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_nln_matrix.F90cime_config/testdefs/testlist_cam.xmlcime_config/config_component.xmlbld/configuresrc/chemistry/pp_trop_strat_mam5_vbs/mo_setrxt.F90cime_config/config_compsets.xmlbld/config_files/definition.xmlsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_factor.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_exp_sol.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_indprd.F90src/chemistry/pp_trop_strat_mam5_vbs/m_rxt_id.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/pp_trop_strat_mam5_vbs/mo_sim_dat.F90src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.insrc/chemistry/pp_trop_strat_mam5_vbs/m_spc_id.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_lu_solve.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_prod_loss.F90src/chemistry/pp_trop_strat_mam5_vbs/chem_mods.F90bld/build-namelistsrc/chemistry/pp_trop_strat_mam5_vbs/mo_adjrxt.F90src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.docsrc/chemistry/pp_trop_strat_mam5_vbs/mo_phtadj.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_imp_sol.F90bld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/pp_trop_strat_mam5_vbs/mo_rxt_rates_conv.F90src/chemistry/pp_trop_strat_mam5_vbs/mo_lin_matrix.F901e021f1b6fb38c40ac54983819681364bc2acd231673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduimplement camchem-mam5 compsets -- FC2000mam5, FCHISTmam5 modified: bld/build-namelist modified: bld/config_files/definition.xml modified: bld/configure modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml modified: cime_config/config_component.xml modified: cime_config/config_compsets.xml modified: cime_config/testdefs/testlist_cam.xml new file: src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.doc new file: src/chemistry/pp_trop_strat_mam5_vbs/chem_mech.in new file: src/chemistry/pp_trop_strat_mam5_vbs/chem_mods.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/m_rxt_id.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/m_spc_id.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_adjrxt.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_exp_sol.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_imp_sol.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_indprd.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_lin_matrix.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_lu_factor.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_lu_solve.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_nln_matrix.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_phtadj.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_prod_loss.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_rxt_rates_conv.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_setrxt.F90 new file: src/chemistry/pp_trop_strat_mam5_vbs/mo_sim_dat.F90 2023-01-06 17:03:21 -07001e021f1b6fb38c40ac54983819681364bc2acd23implement camchem-mam5 compsets -- FC2000mam5, FCHISTmam5addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_factor.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mods.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_indprd.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_imp_sol.F90editbld/namelist_files/namelist_defaults_cam.xmladdsrc/chemistry/pp_trop_strat_mam5_vbs/mo_setrxt.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_exp_sol.F90editbld/namelist_files/namelist_definition.xmleditcime_config/config_compsets.xmleditbld/build-namelistaddsrc/chemistry/pp_trop_strat_mam5_vbs/mo_sim_dat.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_rxt_rates_conv.F90editcime_config/config_component.xmladdsrc/chemistry/pp_trop_strat_mam5_vbs/mo_phtadj.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_nln_matrix.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_adjrxt.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mech.doceditcime_config/testdefs/testlist_cam.xmleditbld/configureaddsrc/chemistry/pp_trop_strat_mam5_vbs/chem_mech.inaddsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lu_solve.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/m_spc_id.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_lin_matrix.F90addsrc/chemistry/pp_trop_strat_mam5_vbs/mo_prod_loss.F90editbld/config_files/definition.xmladdsrc/chemistry/pp_trop_strat_mam5_vbs/m_rxt_id.F90bld/namelist_files/namelist_defaults_cam.xml1cfa1386d796243a4889e35742cff4f0868a777c1673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.educhange physprops inputs for MAM4 (coarse mode) modified: bld/namelist_files/namelist_defaults_cam.xml 2023-01-06 17:03:21 -07001cfa1386d796243a4889e35742cff4f0868a777cchange physprops inputs for MAM4 (coarse mode)editbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xml09f571c800794404146719e4417ae07930f065511673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.edurestrict the MAM4 coarse mode size changes to cam_dev physics modified: bld/namelist_files/namelist_defaults_cam.xml 2023-01-06 17:03:21 -070009f571c800794404146719e4417ae07930f06551restrict the MAM4 coarse mode size changes to cam_dev physicseditbld/namelist_files/namelist_defaults_cam.xmlcime_config/testdefs/testlist_cam.xmlcime_config/config_pes.xmlcime_config/config_component.xmlcime_config/config_compsets.xml82fe64b30abee80e32eded1561b946099ab2d6621673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.educreate LT (L58) and MT (L93) camchem compsets with cam_dev physics modified: cime_config/config_component.xml modified: cime_config/config_compsets.xml modified: cime_config/config_pes.xml modified: cime_config/testdefs/testlist_cam.xml 2023-01-06 17:03:21 -070082fe64b30abee80e32eded1561b946099ab2d662create LT (L58) and MT (L93) camchem compsets with cam_dev physicseditcime_config/config_compsets.xmleditcime_config/config_pes.xmleditcime_config/config_component.xmleditcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testlist_cam.xmlcime_config/config_component.xml96fec236bba503a15e5949ff00dc6246912a13051673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.educhanges to appease code reviewer modified: cime_config/config_component.xml modified: cime_config/testdefs/testlist_cam.xml 2023-01-06 17:03:21 -070096fec236bba503a15e5949ff00dc6246912a1305changes to appease code reviewereditcime_config/testdefs/testlist_cam.xmleditcime_config/config_component.xmlsrc/cpl/nuopc/atm_comp_nuopc.F906ab976abaaa0a50bdcc5d301853a7c3533d52b7a1673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.edumv shr_file to shr_log, fix issue in logunit 2023-01-06 17:03:21 -07006ab976abaaa0a50bdcc5d301853a7c3533d52b7amv shr_file to shr_log, fix issue in loguniteditsrc/cpl/nuopc/atm_comp_nuopc.F90.github/workflows/branch_push_workflow.ymlc2b4a5ab9ecf4fc09816c81b2a3c6d485fbbb4901673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduupdate the workflow to use checkout@v3 2023-01-06 17:03:21 -0700c2b4a5ab9ecf4fc09816c81b2a3c6d485fbbb490update the workflow to use checkout@v3edit.github/workflows/branch_push_workflow.yml.github/workflows/branch_push_workflow.yml90318fef16724a61e5b7bb8bdfd1de7f4d3e46d61673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduupdate setup-python to @v4 2023-01-06 17:03:21 -070090318fef16724a61e5b7bb8bdfd1de7f4d3e46d6update setup-python to @v4edit.github/workflows/branch_push_workflow.ymlsrc/physics/spcam/ecpp/module_ecpp_ppdriver2.F907185100687eb3df1d7d64240305a47f5a052d3091673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduTurn off unit 155 ECPP writing by default 2023-01-06 17:03:21 -07007185100687eb3df1d7d64240305a47f5a052d309Turn off unit 155 ECPP writing by defaulteditsrc/physics/spcam/ecpp/module_ecpp_ppdriver2.F90src/physics/spcam/ecpp/module_ecpp_ppdriver2.F903cb1aace1d7085c75cb951cf03d60eb3f17b5dae1673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduCleanup unit initializations 2023-01-06 17:03:21 -07003cb1aace1d7085c75cb951cf03d60eb3f17b5daeCleanup unit initializationseditsrc/physics/spcam/ecpp/module_ecpp_ppdriver2.F90cime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_defaults_cam.xml70b35c681fcc4c5e82e39cd39839fd691c1eae971673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduset namelist defaults for 93 layer config; tweaks to test list modified: bld/namelist_files/namelist_defaults_cam.xml modified: cime_config/testdefs/testlist_cam.xml 2023-01-06 17:03:21 -070070b35c681fcc4c5e82e39cd39839fd691c1eae97set namelist defaults for 93 layer config; tweaks to test listeditbld/namelist_files/namelist_defaults_cam.xmleditcime_config/testdefs/testlist_cam.xmldoc/ChangeLog46da0bc504998fbd98828ff4a42ed659d99419961673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChangeLog 1st draft 2023-01-06 17:03:21 -070046da0bc504998fbd98828ff4a42ed659d9941996ChangeLog 1st drafteditdoc/ChangeLogExternals.cfg7962cd256820f61f0cccc1b4c31dd1f12ed52cc41673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduuse share1.0.16 external 2023-01-06 17:03:21 -07007962cd256820f61f0cccc1b4c31dd1f12ed52cc4use share1.0.16 externaleditExternals.cfgdoc/ChangeLogeceb761f90eecd8f80f5696d8734b47ee5b4282d1673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduChangeLog update 2023-01-06 17:03:21 -0700eceb761f90eecd8f80f5696d8734b47ee5b4282dChangeLog updateeditdoc/ChangeLogExternals.cfg76567d914dea98bfde1c54c57e12f48f078800181673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdate externals to match cesm2_3_alpha11a - more or less 2023-01-06 17:03:21 -070076567d914dea98bfde1c54c57e12f48f07880018Update externals to match cesm2_3_alpha11a - more or lesseditExternals.cfgcime_config/testdefs/testmods_dirs/cam/dartcambigens/shell_commandscime_config/testdefs/testmods_dirs/cam/carma_sea_salt/shell_commandsc8e385deb7c955841c70405a7f14ac141d3647381673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdd xmlchange commands for NCPL to fix a couple of failing tests 2023-01-06 17:03:21 -0700c8e385deb7c955841c70405a7f14ac141d364738Add xmlchange commands for NCPL to fix a couple of failing testseditcime_config/testdefs/testmods_dirs/cam/dartcambigens/shell_commandseditcime_config/testdefs/testmods_dirs/cam/carma_sea_salt/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_apmee/shell_commands08bc9f4eacd00fdadbeceab0cbbcda75ba58d0ba1673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdd xmlchange commands for NCPL to fix a failing cheyenne test 2023-01-06 17:03:21 -070008bc9f4eacd00fdadbeceab0cbbcda75ba58d0baAdd xmlchange commands for NCPL to fix a failing cheyenne testaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_apmee/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/shell_commands6d47324e3885978b35649d04720d9b878f990f641673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdd xmlchange commands for NCPL to fix a failing gnu test 2023-01-06 17:03:21 -07006d47324e3885978b35649d04720d9b878f990f64Add xmlchange commands for NCPL to fix a failing gnu testeditcime_config/testdefs/testmods_dirs/cam/outfrq3s_chemproc/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_mee_fluxes/shell_commandsc5f35330fcbcf134cb97259db308ecd2beb6c2321673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduFix one more failing cheyenne test 2023-01-06 17:03:21 -0700c5f35330fcbcf134cb97259db308ecd2beb6c232Fix one more failing cheyenne testeditcime_config/testdefs/testmods_dirs/cam/outfrq9s_mee_fluxes/shell_commandsdoc/ChangeLog0c915dfcbfd2ec3bbe382619aab060a680a8d0381673049801000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdate ChangeLog for cam6_3_088 2023-01-06 17:03:21 -07000c915dfcbfd2ec3bbe382619aab060a680a8d038Update ChangeLog for cam6_3_088editdoc/ChangeLogbld/build-namelistd204b72de553e4275c4909ec7dede7885563e6881673102412000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduremoved uneeded DEBUG print 2023-01-07 07:40:12 -0700d204b72de553e4275c4909ec7dede7885563e688removed uneeded DEBUG printeditbld/build-namelistsrc/cpl/nuopc/atm_stream_ndep.F90b812d04115db288302fbd27daa377c17bf88d49a1673176309000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.edufixed compile problem in unit checking of stream input 2023-01-08 04:11:49 -0700b812d04115db288302fbd27daa377c17bf88d49afixed compile problem in unit checking of stream inputeditsrc/cpl/nuopc/atm_stream_ndep.F90src/control/runtime_opts.F90src/physics/cam_dev/physpkg.F90src/physics/cam/physpkg.F90src/dynamics/se/dycore_budget.F90src/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/se/dyn_comp.F90src/control/budgets.F90src/utils/cam_thermo.F90src/physics/cam/check_energy.F90bld/namelist_files/namelist_definition.xmlsrc/physics/cam/cam_diagnostics.F90src/physics/cam/physics_types.F90src/dynamics/mpas/dyn_comp.F90src/dynamics/se/dycore/element_mod.F901b25f82f8f3dab553df14fafbcd8c1e6fd8c2f2a1673283889000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadd budget calculation after number of steps,days,months,years,endofrun and some bugfixes 2023-01-09 10:04:49 -07001b25f82f8f3dab553df14fafbcd8c1e6fd8c2f2aadd budget calculation after number of steps,days,months,years,endofrun and some bugfixeseditsrc/dynamics/se/dyn_comp.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/physics/cam/physics_types.F90editsrc/control/runtime_opts.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/dynamics/se/dycore/element_mod.F90editsrc/control/budgets.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/se/dycore_budget.F90editsrc/physics/cam/check_energy.F90editbld/namelist_files/namelist_definition.xmleditsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/physics/cam_dev/physpkg.F90src/utils/zonal_mean_mod.F90b2901b0af5098f815487fc3fb4374027568325b31673296429000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix 2pi issue; misc clean up modified: src/utils/zonal_mean_mod.F90 2023-01-09 13:33:49 -0700b2901b0af5098f815487fc3fb4374027568325b3fix 2pi issue; misc clean upeditsrc/utils/zonal_mean_mod.F90src/control/budgets.F9028cee0c3dbe65299518c748e3fbbf281fae0a0ed1673296673000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comfix for budget_write functionality when budgeting every timestep 2023-01-09 13:37:53 -070028cee0c3dbe65299518c748e3fbbf281fae0a0edfix for budget_write functionality when budgeting every timestepeditsrc/control/budgets.F90src/utils/zonal_mean_mod.F901457f8ed480dd8675e45f24360f5cc4cf7c542311673296946000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitialize dcor in sh_create_gaus_grid modified: src/utils/zonal_mean_mod.F90 2023-01-09 13:42:26 -07001457f8ed480dd8675e45f24360f5cc4cf7c54231initialize dcor in sh_create_gaus_grideditsrc/utils/zonal_mean_mod.F90src/dynamics/se/dyn_comp.F906cf10ce51d50ded5da0076ba044da4c79c15a67f1673298380000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comget rid of WX test variable 2023-01-09 14:06:20 -07006cf10ce51d50ded5da0076ba044da4c79c15a67fget rid of WX test variableeditsrc/dynamics/se/dyn_comp.F90src/utils/zonal_mean_mod.F908eb35b84c5b38a3c97977c68c8c5088cccc1dde01673302776000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore misc changes modified: src/utils/zonal_mean_mod.F90 2023-01-09 15:19:36 -07008eb35b84c5b38a3c97977c68c8c5088cccc1dde0more misc changeseditsrc/utils/zonal_mean_mod.F90src/dynamics/mpas/dp_coupling.F90src/dynamics/mpas/dyn_comp.F90src/dynamics/se/dyn_comp.F90src/dynamics/mpas/dycore_budget.F90d5539bfc216c1663c82daade7d30dcaeeb82a9a31673311282000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.commpas bug fixes 2023-01-09 17:41:22 -0700d5539bfc216c1663c82daade7d30dcaeeb82a9a3mpas bug fixeseditsrc/dynamics/mpas/dyn_comp.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/dynamics/se/dyn_comp.F90src/dynamics/mpas/dyn_comp.F90a380cb4de78e065789aff8c3ce42c33a809b80441673314326000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comaddfld calls for stages and differences for all thermodynamic categories 2023-01-09 18:32:06 -0700a380cb4de78e065789aff8c3ce42c33a809b8044addfld calls for stages and differences for all thermodynamic categorieseditsrc/dynamics/mpas/dyn_comp.F90doc/ChangeLog903c2df0ab26097cfd2a389a759a07cc1673a2511673369793000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-01-10 09:56:33 -0700903c2df0ab26097cfd2a389a759a07cc1673a251ChangeLog drafteditdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xmla1b1f96bdb86f813ac53be544d7cac871a848ec01673370979000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove old xs_long_file defaults for cam5/6 phys -- mo_usrrxt updates changes answers for cam5/6 modified: bld/namelist_files/namelist_defaults_cam.xml 2023-01-10 10:16:19 -0700a1b1f96bdb86f813ac53be544d7cac871a848ec0remove old xs_long_file defaults for cam5/6 phys -- mo_usrrxt updates changes answers for cam5/6editbld/namelist_files/namelist_defaults_cam.xmldoc/ChangeLog479bf6062f8a27413a23ef7e849c138b539f5be51673376006000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2023-01-10 11:40:06 -0700479bf6062f8a27413a23ef7e849c138b539f5be5ChangeLog updateseditdoc/ChangeLogsrc/dynamics/se/dycore/fvm_control_volume_mod.F90src/dynamics/se/dyn_comp.F90src/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/se/dycore/global_norms_mod.F90795015070a1d78240d761203747a79f06ff918a51673392126000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.combug fixes for CSLAM 2023-01-10 16:08:46 -0700795015070a1d78240d761203747a79f06ff918a5bug fixes for CSLAMeditsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/dynamics/se/dycore/fvm_control_volume_mod.F90editsrc/dynamics/se/dycore/global_norms_mod.F90src/physics/cam/check_energy.F90a9eb66000174c656ac3bcb0ae596d20f920405491673393812000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edufix bug in call to get_hydrostatic_energy in energy diagnostics 2023-01-10 16:36:52 -0700a9eb66000174c656ac3bcb0ae596d20f92040549fix bug in call to get_hydrostatic_energy in energy diagnosticseditsrc/physics/cam/check_energy.F90src/chemistry/mozart/mo_sad.F90bld/namelist_files/namelist_defaults_cam.xmldab73163a5a7f7bdc81c7a7be2e35727ea9c30da1673452609000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate the default lut xs files and correct comment in mo_sad modified: bld/namelist_files/namelist_defaults_cam.xml modified: src/chemistry/mozart/mo_sad.F90 2023-01-11 08:56:49 -0700dab73163a5a7f7bdc81c7a7be2e35727ea9c30daupdate the default lut xs files and correct comment in mo_sadeditbld/namelist_files/namelist_defaults_cam.xmleditsrc/chemistry/mozart/mo_sad.F90bld/namelist_files/namelist_defaults_cam.xml9aa982a503c7a87da53f5889dbd02c31ab2b899e1673459684000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate default ocean_salinity_file modified: bld/namelist_files/namelist_defaults_cam.xml 2023-01-11 10:54:44 -07009aa982a503c7a87da53f5889dbd02c31ab2b899eupdate default ocean_salinity_fileeditbld/namelist_files/namelist_defaults_cam.xmlcime_config/testdefs/testlist_cam.xml73e520eeec97684555ea059aef28f9ef0ab86fae1673462961000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate tests list modified: cime_config/testdefs/testlist_cam.xml 2023-01-11 11:49:21 -070073e520eeec97684555ea059aef28f9ef0ab86faeupdate tests listeditcime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_definition.xml4d5162a0170d9a7a18edebba19da92ff36ec08eb1673463756000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduRemove a few more default lines from namelist definitions 2023-01-11 12:02:36 -07004d5162a0170d9a7a18edebba19da92ff36ec08ebRemove a few more default lines from namelist definitionseditbld/namelist_files/namelist_definition.xmlsrc/physics/cam/check_energy.F9043828170ac3efa314dc5d4636b894ec45d68172b1673466934000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edufix bug in dimension size 2023-01-11 12:55:34 -070043828170ac3efa314dc5d4636b894ec45d68172bfix bug in dimension sizeeditsrc/physics/cam/check_energy.F90doc/ChangeLogbceee2e109c502c882e9e699dedf8c6cae0dfc9d1673469954000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitial ChangeLog 2023-01-11 13:45:54 -0700bceee2e109c502c882e9e699dedf8c6cae0dfc9dinitial ChangeLogeditdoc/ChangeLogcime_config/testdefs/testlist_cam.xmldoc/ChangeLogc553248556ff3fde11b2bbba3185a0b8c87f67b61673470608000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduflag refined configs as not supported 2023-01-11 13:56:48 -0700c553248556ff3fde11b2bbba3185a0b8c87f67b6flag refined configs as not supportededitcime_config/testdefs/testlist_cam.xmleditdoc/ChangeLogsrc/physics/cam/check_energy.F90d77c7a584c80c11f6c76b6a4dfb7cd57fc02ea151673474243000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduanother index bug 2023-01-11 14:57:23 -0700d77c7a584c80c11f6c76b6a4dfb7cd57fc02ea15another index bugeditsrc/physics/cam/check_energy.F90src/physics/cam/physpkg.F90src/physics/cam/nudging.F90a8e6ae607481924d189676bb4e1a868591385acc1673475619000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinvoke final routine; remove note modified: src/physics/cam/nudging.F90 modified: src/physics/cam/physpkg.F90 2023-01-11 15:20:19 -0700a8e6ae607481924d189676bb4e1a868591385accinvoke final routine; remove noteeditsrc/physics/cam/nudging.F90editsrc/physics/cam/physpkg.F90bld/namelist_files/namelist_defaults_cam.xmlcddcc882d22d7abc327a5e5733f3393cbc55ff141673542815000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comAdd cam_physics_mesh defaults to namelist_defaults_cam.xml 2023-01-12 12:00:15 -0500cddcc882d22d7abc327a5e5733f3393cbc55ff14Add cam_physics_mesh defaults to namelist_defaults_cam.xmleditbld/namelist_files/namelist_defaults_cam.xmldoc/ChangeLoga52a56b4853b005dd485b9f32521b993977ddce11673560566000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2023-01-12 14:56:06 -0700a52a56b4853b005dd485b9f32521b993977ddce1update ChangeLogeditdoc/ChangeLogsrc/physics/cam/clubb_intr.F905326c645fa25c7ef4beda38261268eb54efddf7e1673567192000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAddressing final review comments 2023-01-12 16:46:32 -07005326c645fa25c7ef4beda38261268eb54efddf7eAddressing final review commentseditsrc/physics/cam/clubb_intr.F90doc/ChangeLog880dea21ecd77c41e68be39ab61ce945b21dbfb81673568201000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.edudoc/ChangeLog 2023-01-12 17:03:21 -0700880dea21ecd77c41e68be39ab61ce945b21dbfb8doc/ChangeLogeditdoc/ChangeLogsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc_cam.F90dd2449a2bf9f59c0415b9d21e3afffa0a2a920fa1673626838000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edubug fixes modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-01-13 09:20:38 -0700dd2449a2bf9f59c0415b9d21e3afffa0a2a920fabug fixeseditsrc/physics/cam/hetfrz_classnuc.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90src/chemistry/mozart/hco_cc_emissions.F90bbac6885409bff7591ff137a788dca7c301fbb0d1673631475000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate (joint with ce562fd in HEMCO_CESM) to allocate 2-D/3-D pbuf based on extfrc_lst -- do not use directly 2023-01-13 12:37:55 -0500bbac6885409bff7591ff137a788dca7c301fbb0dUpdate (joint with ce562fd in HEMCO_CESM) to allocate 2-D/3-D pbuf based on extfrc_lst -- do not use directlyeditsrc/chemistry/mozart/hco_cc_emissions.F90bld/namelist_files/namelist_definition.xmlbld/build-namelistsrc/physics/cam/clubb_intr.F90bld/namelist_files/namelist_defaults_cam.xml6075b0b04d84b5d29965bcf7b94db528b126b9661673646172000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduAdding namelist support for l_vary_convect_depth, l_standard_term_ta, and l_partial_upwind_wp3 2023-01-13 14:42:52 -07006075b0b04d84b5d29965bcf7b94db528b126b966Adding namelist support for l_vary_convect_depth, l_standard_term_ta, and l_partial_upwind_wp3editsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_definition.xmleditbld/build-namelisteditbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/clubb_intr.F904f866c858c95612a8c3873e1532ba2dc67ce87ce1673653509000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduFixed initialized variable inside clubb ifdefs 2023-01-13 16:45:09 -07004f866c858c95612a8c3873e1532ba2dc67ce87ceFixed initialized variable inside clubb ifdefseditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90ab181c6191077f269e9504b13aacc1138ef1c92a1673654064000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdated ref for sfc flux code 2023-01-13 16:54:24 -0700ab181c6191077f269e9504b13aacc1138ef1c92aUpdated ref for sfc flux codeeditsrc/physics/cam/clubb_intr.F90bld/namelist_files/use_cases/hist_trop_strat_nudged_cam6.xml06a4858d068d2db0143b9902d006547d1dacb39d1673915860000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduLouisa's updates to nudging namelist settings modified: bld/namelist_files/use_cases/hist_trop_strat_nudged_cam6.xml 2023-01-16 17:37:40 -070006a4858d068d2db0143b9902d006547d1dacb39dLouisa's updates to nudging namelist settingseditbld/namelist_files/use_cases/hist_trop_strat_nudged_cam6.xmlsrc/dynamics/se/dycore_budget.F9075d2280609182e2ea4ad4539af488c71c9c41bc61673919266000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduupdates to log file 2023-01-16 18:34:26 -070075d2280609182e2ea4ad4539af488c71c9c41bc6updates to log fileeditsrc/dynamics/se/dycore_budget.F90doc/ChangeLog85e8708d246828556d4ecd2241658be566020e411673923353000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdated ChangeLog 2023-01-16 19:42:33 -070085e8708d246828556d4ecd2241658be566020e41Updated ChangeLogeditdoc/ChangeLogsrc/chemistry/mozart/hco_cc_emissions.F90ef7001995c3d54af19ea2673357e0d87a7010a9e1673926486000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comAdd missing include 2023-01-16 22:34:46 -0500ef7001995c3d54af19ea2673357e0d87a7010a9eAdd missing includeeditsrc/chemistry/mozart/hco_cc_emissions.F90Externals.cfgbld/build-namelistsrc/chemistry/mozart/sums_utils.F90bld/namelist_files/use_cases/waccm_sc_2010_cam6.xmlbld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/mozart/rate_diags.F90bld/namelist_files/use_cases/2010_cam6.xmlsrc/chemistry/mozart/chemistry.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/species_sums_diags.F90edaebd13d78e56025b7ac0d0def604f87c799e301674095924000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrections to MEGAN, use shr expr parser, and other misc changes modified: Externals.cfg modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml modified: bld/namelist_files/use_cases/2010_cam6.xml modified: bld/namelist_files/use_cases/waccm_sc_2010_cam6.xml modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/rate_diags.F90 modified: src/chemistry/mozart/species_sums_diags.F90 deleted: src/chemistry/mozart/sums_utils.F90 2023-01-18 19:38:44 -0700edaebd13d78e56025b7ac0d0def604f87c799e30corrections to MEGAN, use shr expr parser, and other misc changeseditExternals.cfgeditsrc/chemistry/mozart/species_sums_diags.F90deletesrc/chemistry/mozart/sums_utils.F90editbld/namelist_files/use_cases/waccm_sc_2010_cam6.xmleditbld/namelist_files/use_cases/2010_cam6.xmleditsrc/chemistry/mozart/chemistry.F90editbld/namelist_files/namelist_definition.xmleditbld/build-namelisteditsrc/chemistry/mozart/rate_diags.F90editbld/namelist_files/namelist_defaults_cam.xmlcime_config/testdefs/testlist_cam.xmlsrc/physics/cam/nudging.F90159c002a0d82c92f5bb49d2d98e361c2054de5c61674142175000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edureviewer's suggestions -- minor misc changes modified: cime_config/testdefs/testlist_cam.xml modified: src/physics/cam/nudging.F90 2023-01-19 08:29:35 -0700159c002a0d82c92f5bb49d2d98e361c2054de5c6reviewer's suggestions -- minor misc changeseditsrc/physics/cam/nudging.F90editcime_config/testdefs/testlist_cam.xmlsrc/chemistry/mozart/hco_cc_emissions.F90ea420a7214f6c647e052493bbb7ed5a5f5d75b1e1674167771000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFix bug in indexing for hco_cc_emissions; add frcing from in 2023-01-19 17:36:11 -0500ea420a7214f6c647e052493bbb7ed5a5f5d75b1eFix bug in indexing for hco_cc_emissions; add frcing from ineditsrc/chemistry/mozart/hco_cc_emissions.F90src/chemistry/mozart/mo_gas_phase_chemdr.F9084929caf6d1b08ddb6cbaa331213bcafdc5ef16a1674167861000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comRemove extraneous USE and HEMCO_CESM c-preprocessor statement 2023-01-19 17:37:41 -050084929caf6d1b08ddb6cbaa331213bcafdc5ef16aRemove extraneous USE and HEMCO_CESM c-preprocessor statementeditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90bld/configureff86110ca724f99872109b9020e845bf5268b6c31674168082000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate comments in bld/configure for accuracy 2023-01-19 17:41:22 -0500ff86110ca724f99872109b9020e845bf5268b6c3Update comments in bld/configure for accuracyeditbld/configuresrc/chemistry/mozart/hco_cc_emissions.F9036a0aff038f28e954fdf628acf07ad6151c552931674169096000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFix typo in pbuf_ptr_2d nullify 2023-01-19 17:58:16 -050036a0aff038f28e954fdf628acf07ad6151c55293Fix typo in pbuf_ptr_2d nullifyeditsrc/chemistry/mozart/hco_cc_emissions.F90src/utils/cam_thermo.F907e520bd33eef2c465bc5822cfde68c0baa8772801674240040000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edubetter error checking 2023-01-20 11:40:40 -07007e520bd33eef2c465bc5822cfde68c0baa877280better error checkingeditsrc/utils/cam_thermo.F90src/physics/cam/nudging.F90d9696cffbcb3869cbd9676a9d0a91be78cfe41b71674245719000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore changes to appease reviewers modified: src/physics/cam/nudging.F90 2023-01-20 13:15:19 -0700d9696cffbcb3869cbd9676a9d0a91be78cfe41b7more changes to appease reviewerseditsrc/physics/cam/nudging.F90Externals.cfgbld/build-namelistfeeb1bb956ceec9312f8db83b19c4b702fddd00c1674257617000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse ESCOMP tags for externals; add brief documentation for SOAE emissions factors modified: Externals.cfg modified: bld/build-namelist 2023-01-20 16:33:37 -0700feeb1bb956ceec9312f8db83b19c4b702fddd00cuse ESCOMP tags for externals; add brief documentation for SOAE emissions factorseditbld/build-namelisteditExternals.cfgbld/namelist_files/namelist_definition.xmlsrc/physics/simple/frierson.F90src/physics/simple/physpkg.F90src/physics/simple/frierson_cam.F9041366ba250d82894f6a72b513efb74afe56227331674258565000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMore reviewer's comments addressed 2023-01-20 16:49:25 -070041366ba250d82894f6a72b513efb74afe5622733More reviewer's comments addressededitsrc/physics/simple/physpkg.F90editbld/namelist_files/namelist_definition.xmleditsrc/physics/simple/frierson_cam.F90editsrc/physics/simple/frierson.F90bld/build-namelistab50a405574322a961730484677b450720ac3b461674487741000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate comment for SOAE emissions factors modified: bld/build-namelist 2023-01-23 08:29:01 -0700ab50a405574322a961730484677b450720ac3b46update comment for SOAE emissions factorseditbld/build-namelistbld/namelist_files/namelist_definition.xmlbld/namelist_files/use_cases/dctest_frierson.xml1dbe9ee938d712b087f90250eabe9d10787764ad1674512307000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress more review requests 2023-01-23 15:18:27 -07001dbe9ee938d712b087f90250eabe9d10787764adAddress more review requestseditbld/namelist_files/use_cases/dctest_frierson.xmleditbld/namelist_files/namelist_definition.xmlcime_config/testdefs/testlist_cam.xml4441841a8b343c5b11968a5888b470a2024505de1674576251000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumove test to prebeta 2023-01-24 09:04:11 -07004441841a8b343c5b11968a5888b470a2024505demove test to prebetaeditcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testlist_cam.xmlc97bdaeadca8512d3ee595ccf6750bc7c53fd5e41674576435000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduincrease time limit on CONUS test 2023-01-24 09:07:15 -0700c97bdaeadca8512d3ee595ccf6750bc7c53fd5e4increase time limit on CONUS testeditcime_config/testdefs/testlist_cam.xmlsrc/chemistry/aerosol/aerosol_state_mod.F90src/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc_cam.F903622b1e58bb83be63a2b87bbce742ed7410aa8871674582839000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edureplace mass_factors with watact_mfactor modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-01-24 10:53:59 -07003622b1e58bb83be63a2b87bbce742ed7410aa887replace mass_factors with watact_mfactoreditsrc/physics/cam/hetfrz_classnuc.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90doc/ChangeLog0c3cc63286fe9bc4e4e7724eb31f63d4e7edd9521674598275000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2023-01-24 15:11:15 -07000c3cc63286fe9bc4e4e7724eb31f63d4e7edd952update ChangeLogeditdoc/ChangeLogdoc/ChangeLog9fb572ba1c7de9934305a47f19f569df5d18d2291674598555000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2023-01-24 15:15:55 -07009fb572ba1c7de9934305a47f19f569df5d18d229update ChangeLogeditdoc/ChangeLogbld/build-namelist362d0b249a19fab5d62917671c89935690ef9c171674601979000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduDuseong's corrections to emissions settings modified: bld/build-namelist 2023-01-24 16:12:59 -0700362d0b249a19fab5d62917671c89935690ef9c17Duseong's corrections to emissions settingseditbld/build-namelistbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmlbld/namelist_files/use_cases/2010_trop_strat_vbs_cam6.xmlbld/build-namelistbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmlbld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmlbld/namelist_files/use_cases/waccm_ma_2000_cam6.xmlbld/namelist_files/use_cases/2000_trop_strat_vbs_cam6.xml35a326437ce6a1cfbf1e3622ee9353879473cf8a1674691101000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse DMS OASISS emis as defaults modified: bld/build-namelist modified: bld/namelist_files/use_cases/2000_trop_strat_vbs_cam6.xml modified: bld/namelist_files/use_cases/2010_trop_strat_vbs_cam6.xml modified: bld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xml modified: bld/namelist_files/use_cases/waccm_ma_2000_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xml 2023-01-25 16:58:21 -070035a326437ce6a1cfbf1e3622ee9353879473cf8ause DMS OASISS emis as defaultseditbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmleditbld/namelist_files/use_cases/2000_trop_strat_vbs_cam6.xmleditbld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmleditbld/namelist_files/use_cases/waccm_ma_2000_cam6.xmleditbld/namelist_files/use_cases/2010_trop_strat_vbs_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmleditbld/build-namelistbld/build-namelist42118903742111a3819cc3c0ec94f084354689fe1674767688000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd check for csw_cycle_yr modified: bld/build-namelist 2023-01-26 14:14:48 -070042118903742111a3819cc3c0ec94f084354689feadd check for csw_cycle_yreditbld/build-namelistbld/namelist_files/namelist_definition.xmlsrc/physics/simple/frierson_cam.F90src/physics/simple/restart_physics.F90a11a6bef77116cdc9d8acb0b88b4f7f6f471c9f41674844146000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix limitation for calls in restart_physics and minor comment updates 2023-01-27 11:29:06 -0700a11a6bef77116cdc9d8acb0b88b4f7f6f471c9f4Fix limitation for calls in restart_physics and minor comment updateseditsrc/physics/simple/frierson_cam.F90editsrc/physics/simple/restart_physics.F90editbld/namelist_files/namelist_definition.xmlsrc/physics/simple/frierson.F90af12be801857e8ff3dd63d9fd0fa023d3f214e261674860159000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAnother comment update 2023-01-27 15:55:59 -0700af12be801857e8ff3dd63d9fd0fa023d3f214e26Another comment updateeditsrc/physics/simple/frierson.F90src/physics/simple/frierson.F90920b3374cb6f36edc85a614c83f7101745c200b81674860994000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMinor comment edits 2023-01-27 16:09:54 -0700920b3374cb6f36edc85a614c83f7101745c200b8Minor comment editseditsrc/physics/simple/frierson.F90bld/namelist_files/namelist_defaults_cam.xml13ef355889b6a9c3eb7e1d93a27883780e58bda51675183581000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.edufixed specification for clm_2010 2023-01-31 09:46:21 -070013ef355889b6a9c3eb7e1d93a27883780e58bda5fixed specification for clm_2010editbld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90bld/namelist_files/namelist_defaults_cam.xmlbld/build-namelistee8646fe0caadf9466974c437948704492e683f41675197904000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduset default scaling factors; skip pcarbon mode modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 2023-01-31 13:45:04 -0700ee8646fe0caadf9466974c437948704492e683f4set default scaling factors; skip pcarbon modeeditbld/build-namelisteditsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editbld/namelist_files/namelist_defaults_cam.xmlExternals.cfgsrc/cpl/nuopc/atm_import_export.F90bld/build-namelistsrc/chemistry/mozart/mo_lightning.F90src/physics/cam/physpkg.F90src/control/camsrfexch.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/pp_none/chemistry.F90b66dd91659af11301877190779f087719bedf4fe1675276949000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edupass lightning flash frequency to mediator for CTSM modified: Externals.cfg modified: bld/build-namelist modified: bld/namelist_files/namelist_definition.xml modified: src/chemistry/mozart/mo_lightning.F90 modified: src/chemistry/pp_none/chemistry.F90 modified: src/control/camsrfexch.F90 modified: src/cpl/nuopc/atm_import_export.F90 modified: src/physics/cam/physpkg.F90 2023-02-01 11:42:29 -0700b66dd91659af11301877190779f087719bedf4fepass lightning flash frequency to mediator for CTSMeditbld/namelist_files/namelist_definition.xmleditsrc/control/camsrfexch.F90editbld/build-namelisteditsrc/chemistry/mozart/mo_lightning.F90editsrc/physics/cam/physpkg.F90editExternals.cfgeditsrc/cpl/nuopc/atm_import_export.F90editsrc/chemistry/pp_none/chemistry.F90src/control/camsrfexch.F90bld/namelist_files/namelist_definition.xmlsrc/cpl/nuopc/atm_import_export.F90bld/build-namelistsrc/chemistry/mozart/mo_lightning.F90src/chemistry/pp_none/chemistry.F906a89a319d5c3fa68d55cd4f6280ebdd0dd5ebe0e1675276949000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduImprove cld-to-grnd lightning documentation; change "atm_lightning_flash_freq" to "atm_provides_lightning"; minor cleanup modified: bld/build-namelist modified: bld/namelist_files/namelist_definition.xml modified: src/chemistry/mozart/mo_lightning.F90 modified: src/chemistry/pp_none/chemistry.F90 modified: src/control/camsrfexch.F90 modified: src/cpl/nuopc/atm_import_export.F90 2023-02-01 11:42:29 -07006a89a319d5c3fa68d55cd4f6280ebdd0dd5ebe0eImprove cld-to-grnd lightning documentation; change "atm_lightning_flash_freq" to "atm_provides_lightning"; minor cleanupeditbld/namelist_files/namelist_definition.xmleditsrc/control/camsrfexch.F90editbld/build-namelisteditsrc/chemistry/pp_none/chemistry.F90editsrc/cpl/nuopc/atm_import_export.F90editsrc/chemistry/mozart/mo_lightning.F90src/control/camsrfexch.F90src/chemistry/mozart/mo_chemini.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/mo_lightning.F90src/physics/cam/physpkg.F90src/chemistry/pp_none/chemistry.F90fde2a59ddd7afbb8b595208a13e9360852be50d81675276995000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduFix restart issue -- use pbuf field for flash freq field modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/mo_chemini.F90 modified: src/chemistry/mozart/mo_lightning.F90 modified: src/chemistry/pp_none/chemistry.F90 modified: src/control/camsrfexch.F90 modified: src/physics/cam/physpkg.F90 2023-02-01 11:43:15 -0700fde2a59ddd7afbb8b595208a13e9360852be50d8Fix restart issue -- use pbuf field for flash freq fieldeditsrc/control/camsrfexch.F90editsrc/chemistry/mozart/mo_chemini.F90editsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_lightning.F90editsrc/chemistry/pp_none/chemistry.F90editsrc/physics/cam/physpkg.F90src/cpl/nuopc/atm_import_export.F90bld/build-namelist9f0650e25b61ed86010f0d3bb556d25aae2e398a1675277033000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduCheck namelist setting of atm_provides_lightning modified: bld/build-namelist modified: src/cpl/nuopc/atm_import_export.F90 2023-02-01 11:43:53 -07009f0650e25b61ed86010f0d3bb556d25aae2e398aCheck namelist setting of atm_provides_lightningeditbld/build-namelisteditsrc/cpl/nuopc/atm_import_export.F90src/chemistry/mozart/mo_lightning.F90bld/build-namelist8566caa42019189c6fd016c95313a5f34a42dc1a1675277033000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educalc lightning only when cam phys is used modified: bld/build-namelist modified: src/chemistry/mozart/mo_lightning.F90 2023-02-01 11:43:53 -07008566caa42019189c6fd016c95313a5f34a42dc1acalc lightning only when cam phys is usededitsrc/chemistry/mozart/mo_lightning.F90editbld/build-namelistsrc/control/runtime_opts.F90src/cpl/nuopc/atm_import_export.F90bld/build-namelistsrc/chemistry/mozart/mo_lightning.F90src/chemistry/mozart/mo_chemini.F90src/chemistry/mozart/chemistry.F90bld/namelist_files/namelist_definition.xml4afeaae67e7617522e71959cde128cbe524673531675277077000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduapply namelist scaling factor to flash freq modified: bld/build-namelist modified: bld/namelist_files/namelist_definition.xml modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/mo_chemini.F90 modified: src/chemistry/mozart/mo_lightning.F90 modified: src/control/runtime_opts.F90 modified: src/cpl/nuopc/atm_import_export.F90 2023-02-01 11:44:37 -07004afeaae67e7617522e71959cde128cbe52467353apply namelist scaling factor to flash freqeditsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_lightning.F90editsrc/cpl/nuopc/atm_import_export.F90editsrc/chemistry/mozart/mo_chemini.F90editbld/build-namelisteditsrc/control/runtime_opts.F90editbld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/mo_chemini.F90src/control/camsrfexch.F90src/chemistry/mozart/chemistry.F90src/physics/cam/physpkg.F90src/chemistry/mozart/mo_lightning.F90src/chemistry/pp_none/chemistry.F901481f619bb15cb1fb8fae8829b0633c2d6b06d671675277134000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educode clean up modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/mo_chemini.F90 modified: src/chemistry/mozart/mo_lightning.F90 modified: src/chemistry/pp_none/chemistry.F90 modified: src/control/camsrfexch.F90 modified: src/physics/cam/physpkg.F90 2023-02-01 11:45:34 -07001481f619bb15cb1fb8fae8829b0633c2d6b06d67code clean upeditsrc/physics/cam/physpkg.F90editsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_lightning.F90editsrc/chemistry/mozart/mo_chemini.F90editsrc/chemistry/pp_none/chemistry.F90editsrc/control/camsrfexch.F90src/cpl/nuopc/atm_stream_ndep.F90bld/namelist_files/use_cases/aquaplanet_rce_cam6.xmlsrc/cpl/nuopc/atm_import_export.F90bld/build-namelistbld/namelist_files/use_cases/aquaplanet_cam5.xmlbld/namelist_files/use_cases/aquaplanet_cam6.xml19b3a2ac55e9dfb4e2a74b9826542ca3eef3db591675371061000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduupdates to address PR review comments 2023-02-02 13:51:01 -070019b3a2ac55e9dfb4e2a74b9826542ca3eef3db59updates to address PR review commentseditbld/build-namelisteditbld/namelist_files/use_cases/aquaplanet_cam5.xmleditsrc/cpl/nuopc/atm_stream_ndep.F90editbld/namelist_files/use_cases/aquaplanet_cam6.xmleditsrc/cpl/nuopc/atm_import_export.F90editbld/namelist_files/use_cases/aquaplanet_rce_cam6.xmlsrc/utils/cam_thermo.F90src/dynamics/mpas/dp_coupling.F90src/physics/cam/check_energy.F900544d0dc1ecd09b8fa8355647c24060685e605e81675377846000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edumake MPAS use cam_thermo energy routines 2023-02-02 15:44:06 -07000544d0dc1ecd09b8fa8355647c24060685e605e8make MPAS use cam_thermo energy routineseditsrc/physics/cam/check_energy.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/mpas/dp_coupling.F90src/physics/cam/clubb_intr.F901f110a854fb4d7dd0a8971c9a8fbc73f7779dc231675393342000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comfirst commit 2023-02-02 20:02:22 -07001f110a854fb4d7dd0a8971c9a8fbc73f7779dc23first commiteditsrc/physics/cam/clubb_intr.F90src/control/camsrfexch.F90src/physics/cam_dev/physpkg.F90src/cpl/nuopc/atm_import_export.F90src/chemistry/mozart/mo_lightning.F90047793b2b5442a4c08b7e6e385bbe0ee359532571675429427000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrections for later cmeps modified: src/chemistry/mozart/mo_lightning.F90 modified: src/control/camsrfexch.F90 modified: src/cpl/nuopc/atm_import_export.F90 modified: src/physics/cam_dev/physpkg.F90 2023-02-03 06:03:47 -0700047793b2b5442a4c08b7e6e385bbe0ee35953257corrections for later cmepseditsrc/physics/cam_dev/physpkg.F90editsrc/control/camsrfexch.F90editsrc/chemistry/mozart/mo_lightning.F90editsrc/cpl/nuopc/atm_import_export.F90src/physics/cam/clubb_intr.F90b2667193765777a5fd7581c29f53bbd44106e20c1675442555000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comcleaned up some comments 2023-02-03 09:42:35 -0700b2667193765777a5fd7581c29f53bbd44106e20ccleaned up some commentseditsrc/physics/cam/clubb_intr.F90src/control/camsrfexch.F90bld/build-namelistdb9bb12147a3ad75433c151f5e128ef5b4c99d791675453030000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduatm_provides_lightning is FALSE if simple phys or aquaplanet modified: bld/build-namelist modified: src/control/camsrfexch.F90 2023-02-03 12:37:10 -0700db9bb12147a3ad75433c151f5e128ef5b4c99d79atm_provides_lightning is FALSE if simple phys or aquaplaneteditsrc/control/camsrfexch.F90editbld/build-namelistsrc/dynamics/se/dycore_budget.F90src/utils/cam_thermo.F90src/dynamics/se/dycore/prim_advance_mod.F90src/physics/cam/check_energy.F9064a592eae7e5b1b00b9feecf13e8d6a298637f5a1675465551000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduuse thermo infrastructure in SE energy calculations 2023-02-03 16:05:51 -070064a592eae7e5b1b00b9feecf13e8d6a298637f5ause thermo infrastructure in SE energy calculationseditsrc/utils/cam_thermo.F90editsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/physics/cam/check_energy.F90src/physics/cam/clubb_intr.F904530e7e12433544a987e1acf24bba35dcf6ab6771675467435000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comcleaned up comments 2023-02-03 16:37:15 -07004530e7e12433544a987e1acf24bba35dcf6ab677cleaned up commentseditsrc/physics/cam/clubb_intr.F90bld/configurebld/namelist_files/namelist_definition.xmlsrc/chemistry/mozart/mo_sad.F90src/chemistry/mozart/mo_usrrxt.F90cime_config/testdefs/testlist_cam.xmlc856050493a267b4941b8a6517eeecd4d7fed55b1675525975000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduminor changes per reviewers suggestions modified: bld/configure modified: bld/namelist_files/namelist_definition.xml modified: cime_config/testdefs/testlist_cam.xml modified: src/chemistry/mozart/mo_sad.F90 modified: src/chemistry/mozart/mo_usrrxt.F90 2023-02-04 08:52:55 -0700c856050493a267b4941b8a6517eeecd4d7fed55bminor changes per reviewers suggestionseditsrc/chemistry/mozart/mo_usrrxt.F90editbld/namelist_files/namelist_definition.xmleditbld/configureeditcime_config/testdefs/testlist_cam.xmleditsrc/chemistry/mozart/mo_sad.F90src/cpl/nuopc/atm_stream_ndep.F901f35d68b56ca7f790d4cc09f7658fde0044da8981675624193000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.edufixed additional issue in PR 2023-02-05 12:09:53 -07001f35d68b56ca7f790d4cc09f7658fde0044da898fixed additional issue in PReditsrc/cpl/nuopc/atm_stream_ndep.F90src/physics/simple/frierson.F90src/physics/simple/frierson_cam.F907f20fa62e1806f4b521ea511f7c7d84c208834731675723373000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFinal cleanup per instructions from Patrick 2023-02-06 15:42:53 -07007f20fa62e1806f4b521ea511f7c7d84c20883473Final cleanup per instructions from Patrickeditsrc/physics/simple/frierson.F90editsrc/physics/simple/frierson_cam.F90doc/ChangeLogf2c59414282bb9d6b2a73f60fecd5e2a95b8337e1675729807000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-02-06 17:30:07 -0700f2c59414282bb9d6b2a73f60fecd5e2a95b8337eChangeLog drafteditdoc/ChangeLogsrc/chemistry/mozart/mo_lightning.F9039d1c7de65f54881c689ba8673b30a7f42efae2f1675776241000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove factor from cld2grnd flash freq; fix typos modified: src/chemistry/mozart/mo_lightning.F90 2023-02-07 06:24:01 -070039d1c7de65f54881c689ba8673b30a7f42efae2fremove factor from cld2grnd flash freq; fix typoseditsrc/chemistry/mozart/mo_lightning.F90doc/ChangeLog4da23efaaa3c89fed3a96ad6e30c40a5c42d39b01675783069000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-02-07 08:17:49 -07004da23efaaa3c89fed3a96ad6e30c40a5c42d39b0ChangeLog updateeditdoc/ChangeLogdoc/ChangeLog77e7bb584911af14b5a041f7f0542c041fd357e91675789825000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-02-07 10:10:25 -070077e7bb584911af14b5a041f7f0542c041fd357e9ChangeLog updateeditdoc/ChangeLogsrc/chemistry/mozart/mo_lightning.F90723f1cd24eca5a3a00e6dc2b3311425b7883f9041675794000000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduMinor changes to history fld units modified: src/chemistry/mozart/mo_lightning.F90 2023-02-07 11:20:00 -0700723f1cd24eca5a3a00e6dc2b3311425b7883f904Minor changes to history fld unitseditsrc/chemistry/mozart/mo_lightning.F90src/physics/simple/frierson.F90bcb09c47ab41969078311764ccffd777837d6fb41675794135000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove unnecessary conditional 2023-02-07 11:22:15 -0700bcb09c47ab41969078311764ccffd777837d6fb4Remove unnecessary conditionaleditsrc/physics/simple/frierson.F90src/physics/simple/frierson.F90f33799e3b37c4232400b09ab0bf36b973712a9271675795765000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduModify conditional 2023-02-07 11:49:25 -0700f33799e3b37c4232400b09ab0bf36b973712a927Modify conditionaleditsrc/physics/simple/frierson.F90src/control/cam_history.F90src/physics/cam/physpkg.F90src/control/cam_history_support.F90src/dynamics/se/dycore_budget.F90src/dynamics/se/dycore/prim_advance_mod.F90src/control/cam_control_mod.F90src/dynamics/se/dycore/fvm_control_volume_mod.F90src/physics/cam/phys_control.F90src/control/cam_history_buffers.F90src/dynamics/se/dyn_comp.F90src/utils/cam_thermo.F90src/control/budgets.F90src/physics/cam/check_energy.F90bld/namelist_files/namelist_definition.xmlsrc/physics/cam/cam_diagnostics.F90src/utils/cam_grid_support.F90src/physics/cam/physics_types.F90src/dynamics/se/dycore/element_mod.F902f61e78160ce8f1a6d3d7630f46956dc20a36b691675805705000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.cominitial checkin of jt ebudget changes cam6387 2023-02-07 14:35:05 -07002f61e78160ce8f1a6d3d7630f46956dc20a36b69initial checkin of jt ebudget changes cam6387editsrc/physics/cam/physpkg.F90editsrc/control/cam_history_support.F90editsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/se/dycore/fvm_control_volume_mod.F90editsrc/physics/cam/phys_control.F90editsrc/dynamics/se/dycore/element_mod.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/physics/cam/physics_types.F90editsrc/utils/cam_thermo.F90editsrc/control/cam_control_mod.F90editsrc/physics/cam/check_energy.F90editsrc/control/cam_history_buffers.F90editsrc/dynamics/se/dycore_budget.F90editsrc/control/cam_history.F90editsrc/utils/cam_grid_support.F90editsrc/control/budgets.F90editbld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F908d8b0f0d371b8115fe11cb79d9feff595849b28b1675812421000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comcleaned up mods 2023-02-07 16:27:01 -07008d8b0f0d371b8115fe11cb79d9feff595849b28bcleaned up modseditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90e9542a7014f8ce611221d65ca092a50a4f8010f31675891307000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comaddress cheryl's prelim review 2023-02-08 14:21:47 -0700e9542a7014f8ce611221d65ca092a50a4f8010f3address cheryl's prelim revieweditsrc/physics/cam/clubb_intr.F90bld/config_files/definition.xml8a40bf773f09143a5aa69d6d546b098430b4795e1675891385000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove extraneous space which prevented spcams from running 2023-02-08 14:23:05 -07008a40bf773f09143a5aa69d6d546b098430b4795eRemove extraneous space which prevented spcams from runningeditbld/config_files/definition.xmlsrc/physics/cam/clubb_intr.F900a899474bca37d8db20dfd2f2463644e0405a4591675900185000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comaddressed francis and jesse reviews 2023-02-08 16:49:45 -07000a899474bca37d8db20dfd2f2463644e0405a459addressed francis and jesse reviewseditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F908c0ab2ad86e89504f2b18f9c1e8bb2a96e7948c51675905253000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comfix comment 2023-02-08 18:14:13 -07008c0ab2ad86e89504f2b18f9c1e8bb2a96e7948c5fix commenteditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F90a6aac0888d3468ba2bcfb9ec0b20b1d9cb2270f01675906003000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comconvert clubb tendencies in history output to wet 2023-02-08 18:26:43 -0700a6aac0888d3468ba2bcfb9ec0b20b1d9cb2270f0convert clubb tendencies in history output to weteditsrc/physics/cam/clubb_intr.F90src/physics/cam/clubb_intr.F9063266955f767678792c7748a60d3a5869e9fbe8b1675906104000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comtypo 2023-02-08 18:28:24 -070063266955f767678792c7748a60d3a5869e9fbe8btypoeditsrc/physics/cam/clubb_intr.F90Externals_CAM.cfg59481bd44112d588e7e2cb21ccc3819ea1c648e81675969356000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comTag to upstream HEMCO-CESM 1.1.0 and HEMCO 3.6.0 2023-02-09 14:02:36 -050059481bd44112d588e7e2cb21ccc3819ea1c648e8Tag to upstream HEMCO-CESM 1.1.0 and HEMCO 3.6.0editExternals_CAM.cfgsrc/chemistry/mozart/hco_cc_emissions.F90064b57f95b742349ddd78984fb2c56c67d03793a1675969716000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comNow process surface layer emissions in hco_set_extfrc instead of hco_set_srf_emissions 2023-02-09 14:08:36 -0500064b57f95b742349ddd78984fb2c56c67d03793aNow process surface layer emissions in hco_set_extfrc instead of hco_set_srf_emissionseditsrc/chemistry/mozart/hco_cc_emissions.F90doc/ChangeLog21d386f08c7142ace515645a673dc446ad29734e1675976799000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduInitial ChangeLog changes 2023-02-09 14:06:39 -070021d386f08c7142ace515645a673dc446ad29734eInitial ChangeLog changeseditdoc/ChangeLogdoc/ChangeLogfa3ff57b1165a8ddf0174b9caf65c85b140d3f091675982715000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd baseline differences to ChangeLog 2023-02-09 15:45:15 -0700fa3ff57b1165a8ddf0174b9caf65c85b140d3f09Add baseline differences to ChangeLogeditdoc/ChangeLogdoc/ChangeLog3d5c2a71506e689adfa99aa70938edb26a75dde51675984409000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comcompleted out ChangeLog 2023-02-09 16:13:29 -07003d5c2a71506e689adfa99aa70938edb26a75dde5completed out ChangeLogeditdoc/ChangeLogsrc/chemistry/mozart/mo_usrrxt.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/shell_commandscime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/shell_commands4ee5d7b31a36b7258c636f610867879385f719311676312260000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd mam4 tests; adjust comments in usrrxt modified: cime_config/testdefs/testlist_cam.xml modified: src/chemistry/mozart/mo_usrrxt.F90 new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/user_nl_clm new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/user_nl_clm new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/shell_commands new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/user_nl_cam new file: cime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/user_nl_clm 2023-02-13 11:17:40 -07004ee5d7b31a36b7258c636f610867879385f71931add mam4 tests; adjust comments in usrrxtaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_mam4/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_waccm_ma_mam4/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/user_nl_clmeditcime_config/testdefs/testlist_cam.xmleditsrc/chemistry/mozart/mo_usrrxt.F90doc/ChangeLogf57d20b5a2fac68e593306b1fa567e5214898fe11676331232000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-02-13 16:33:52 -0700f57d20b5a2fac68e593306b1fa567e5214898fe1ChangeLog drafteditdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xmlbld/build-namelist1f0b7676349e0bd1ed5d25f640fdf7c21ada0c1c1676392187000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdates to default namelist settings modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml 2023-02-14 09:29:47 -07001f0b7676349e0bd1ed5d25f640fdf7c21ada0c1cupdates to default namelist settingseditbld/namelist_files/namelist_defaults_cam.xmleditbld/build-namelistdoc/ChangeLogbef917f8a2d84bc61804fe925cc81dc412e498c41676395268000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2023-02-14 10:21:08 -0700bef917f8a2d84bc61804fe925cc81dc412e498c4ChangeLog updateseditdoc/ChangeLogdoc/ChangeLog331532df80eed78494dc25200872f9c35caff0e61676432878000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2023-02-14 20:47:58 -0700331532df80eed78494dc25200872f9c35caff0e6ChangeLog updateseditdoc/ChangeLogdoc/ChangeLogbd172ac3bd93a9620f1ba6f127d6d50365ba0de01676466391000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2023-02-15 06:06:31 -0700bd172ac3bd93a9620f1ba6f127d6d50365ba0de0ChangeLog updateseditdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xml4b4b41763e391f92be57dc8732e445d54eafc3281676638277000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduremoved unnecessary settings from namelist_definition.xml 2023-02-17 05:51:17 -07004b4b41763e391f92be57dc8732e445d54eafc328removed unnecessary settings from namelist_definition.xmleditbld/namelist_files/namelist_defaults_cam.xmlcime_config/config_component.xmlsrc/cpl/nuopc/atm_stream_ndep.F90bld/build-namelist20034f4fbeceed432d3b5a5ef2422bcc1a85e61d1676639319000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduaddressed more issue brought up in PR review 2023-02-17 06:08:39 -070020034f4fbeceed432d3b5a5ef2422bcc1a85e61daddressed more issue brought up in PR revieweditbld/build-namelisteditcime_config/config_component.xmleditsrc/cpl/nuopc/atm_stream_ndep.F90bld/namelist_files/namelist_definition.xml8bb802667736c44e281f0d1b64ca73aef451ffef1676668795000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.eduremoval of unused namelists 2023-02-17 14:19:55 -07008bb802667736c44e281f0d1b64ca73aef451ffefremoval of unused namelistseditbld/namelist_files/namelist_definition.xmlsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc_cam.F90src/utils/physconst.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90e0c1c89d8a2c0a0e6361a4e3da0935dd87478ac11676686162000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhanges to appease code reviewers modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 modified: src/utils/physconst.F90 2023-02-17 19:09:22 -0700e0c1c89d8a2c0a0e6361a4e3da0935dd87478ac1changes to appease code reviewerseditsrc/utils/physconst.F90editsrc/physics/cam/hetfrz_classnuc.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90bld/namelist_files/namelist_definition.xmla64635566ec55f6d655728e144bee014a2e33a731676687120000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrect hetfrz scalfac Defaults in namelist_definition 2023-02-17 19:25:20 -0700a64635566ec55f6d655728e144bee014a2e33a73correct hetfrz scalfac Defaults in namelist_definitioneditbld/namelist_files/namelist_definition.xmlbld/namelist_files/namelist_definition.xml76c37386551fc8b8604da7712c4f6917f9c9d71e1677012610000http://carson.math.uwm.edu/jenkins/user/mvertensmvertensmvertens@ucar.edufixed grammar 2023-02-21 13:50:10 -070076c37386551fc8b8604da7712c4f6917f9c9d71efixed grammareditbld/namelist_files/namelist_definition.xmlsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc_cam.F90b9d4e7d89da32f697cef1c59cc8b228e739ea9881677017898000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduAndrew's changes modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-02-21 15:18:18 -0700b9d4e7d89da32f697cef1c59cc8b228e739ea988Andrew's changeseditsrc/physics/cam/hetfrz_classnuc.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam_dev/physpkg.F90src/physics/cam/physpkg.F90src/utils/cam_thermo.F90src/utils/air_composition.F90src/dynamics/mpas/dycore_budget.F90src/dynamics/se/dp_coupling.F90src/physics/cam/check_energy.F90src/dynamics/se/dycore_budget.F90src/physics/cam/physics_types.F90src/dynamics/se/dycore/prim_advance_mod.F90b0ceae63d7384f3abba7fa472f0cdc0d2aacb3b61677098078000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edulots of science changes: - all water in pressure - energy fixer using energy consistent with SE dycore (similar to MPAS) - no frictional heating in sponge - moving towards meaningful log file energy text 2023-02-22 13:34:38 -0700b0ceae63d7384f3abba7fa472f0cdc0d2aacb3b6lots of science changes:editsrc/utils/air_composition.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam/physics_types.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/se/dp_coupling.F90editsrc/dynamics/se/dycore_budget.F90editsrc/physics/cam/check_energy.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/physics/cam_dev/physpkg.F90src/dynamics/mpas/dp_coupling.F90src/dynamics/fv/dp_coupling.F90190dd147b6ff7628a26c5e5f286e2ebcc1f683c11677103054000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduadopt new subroutine names in fv and mpas 2023-02-22 14:57:34 -0700190dd147b6ff7628a26c5e5f286e2ebcc1f683c1adopt new subroutine names in fv and mpaseditsrc/dynamics/mpas/dp_coupling.F90editsrc/dynamics/fv/dp_coupling.F90src/control/cam_history.F90src/physics/cam_dev/physpkg.F90src/dynamics/se/dyn_grid.F90src/control/cam_history_support.F90src/physics/cam/phys_grid.F90src/utils/cam_thermo.F90src/dynamics/se/dyn_comp.F90src/infrastructure/phys_grid.F90bld/namelist_files/namelist_definition.xmlsrc/physics/cam/physpkg.F90src/dynamics/se/dycore/global_norms_mod.F90src/dynamics/mpas/dycore_budget.F90src/dynamics/mpas/dyn_grid.F90src/dynamics/se/dycore_budget.F90src/dynamics/se/dycore/prim_advance_mod.F90src/physics/cam/phys_control.F90src/control/cam_history_buffers.F90src/dynamics/mpas/dp_coupling.F90src/control/cam_comp.F90src/dynamics/se/dycore/prim_driver_mod.F90src/control/budgets.F90src/physics/cam/check_energy.F90src/utils/cam_grid_support.F90src/physics/cam/cam_diagnostics.F90src/dynamics/mpas/dyn_comp.F90be96dfc7ebab1c3680bea5a93d93389f633edbe01677178720000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comrefactor/simplify budget code to use history buffers 2023-02-23 11:58:40 -0700be96dfc7ebab1c3680bea5a93d93389f633edbe0refactor/simplify budget code to use history bufferseditsrc/physics/cam/phys_grid.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/dynamics/se/dycore_budget.F90editsrc/utils/cam_thermo.F90editsrc/physics/cam/check_energy.F90editsrc/control/cam_history_buffers.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/dynamics/se/dycore/prim_driver_mod.F90editsrc/dynamics/se/dycore/global_norms_mod.F90editbld/namelist_files/namelist_definition.xmleditsrc/dynamics/se/dyn_grid.F90editsrc/control/cam_comp.F90editsrc/infrastructure/phys_grid.F90editsrc/control/budgets.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/dynamics/mpas/dyn_grid.F90editsrc/utils/cam_grid_support.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/physics/cam/phys_control.F90editsrc/control/cam_history_support.F90editsrc/dynamics/se/dyn_comp.F90editsrc/physics/cam/physpkg.F90editsrc/control/cam_history.F90editsrc/physics/cam_dev/physpkg.F90src/physics/cam_dev/physpkg.F90src/physics/cam/physpkg.F90src/utils/cam_thermo.F90src/utils/air_composition.F90src/dynamics/se/dp_coupling.F90src/physics/cam/check_energy.F90src/dynamics/se/dycore_budget.F90f24b0f2665a6bcc13ee368128f7b28118eb1f7911677279717000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduinfrastructure for more accurate energy computation for MPAS; futher improvements to log file output for SE 2023-02-24 16:01:57 -0700f24b0f2665a6bcc13ee368128f7b28118eb1f791infrastructure for more accurate energy computation for MPAS; futher improvements to log file output for SEeditsrc/dynamics/se/dp_coupling.F90editsrc/physics/cam_dev/physpkg.F90editsrc/utils/air_composition.F90editsrc/physics/cam/physpkg.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/se/dycore_budget.F90editsrc/physics/cam/check_energy.F90src/utils/air_composition.F90src/dynamics/mpas/dp_coupling.F90src/physics/cam/check_energy.F9044b73a5ebc2ea34a2482ea92da3fdaeef50979611677356250000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduMPAS thermo 2023-02-25 13:17:30 -070044b73a5ebc2ea34a2482ea92da3fdaeef5097961MPAS thermoeditsrc/utils/air_composition.F90editsrc/physics/cam/check_energy.F90editsrc/dynamics/mpas/dp_coupling.F90src/control/cam_history.F90src/dynamics/fv3/dycore_budget.F90src/dynamics/fv/dycore_budget.F90src/dynamics/fv/dp_coupling.F90src/control/budgets.F90src/physics/cam/physpkg.F90src/dynamics/mpas/dycore_budget.F90bld/namelist_files/namelist_definition.xmlsrc/physics/simple/physpkg.F90src/dynamics/eul/dycore_budget.F90src/dynamics/se/dycore_budget.F90src/dynamics/fv/metdata.F9025d2b447e4d6427911d6a6b609fdf61e2debd40d1677700791000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comregression test bug fixes for budget and dycores 2023-03-01 12:59:51 -070025d2b447e4d6427911d6a6b609fdf61e2debd40dregression test bug fixes for budget and dycoreseditsrc/dynamics/fv/metdata.F90addsrc/dynamics/fv3/dycore_budget.F90editsrc/physics/simple/physpkg.F90addsrc/dynamics/fv/dycore_budget.F90editsrc/control/budgets.F90addsrc/dynamics/eul/dycore_budget.F90editsrc/physics/cam/physpkg.F90editbld/namelist_files/namelist_definition.xmleditsrc/dynamics/mpas/dycore_budget.F90editsrc/control/cam_history.F90editsrc/dynamics/fv/dp_coupling.F90editsrc/dynamics/se/dycore_budget.F90src/physics/cam_dev/physpkg.F90src/physics/simple/physpkg.F90src/physics/cam/physpkg.F90src/dynamics/se/dyn_comp.F900b06ea26332ec9af4034f3c7c989d1794fa213521677727607000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.commore regression fixes, this time for izumi 2023-03-01 20:26:47 -07000b06ea26332ec9af4034f3c7c989d1794fa21352more regression fixes, this time for izumieditsrc/physics/simple/physpkg.F90editsrc/physics/cam/physpkg.F90editsrc/dynamics/se/dyn_comp.F90editsrc/physics/cam_dev/physpkg.F90src/physics/cam/phys_control.F90src/control/runtime_opts.F90src/chemistry/mozart/mo_gas_phase_chemdr.F90src/chemistry/mozart/hco_cc_emissions.F90bld/build-namelistsrc/physics/cam/physpkg.F90src/chemistry/mozart/mo_setext.F90bld/namelist_files/namelist_defaults_cam.xmlbld/configuresrc/chemistry/mozart/mo_chemini.F90src/chemistry/mozart/chemistry.F90bld/namelist_files/namelist_definition.xml522795045bf2771eca5501083c9129f3d3c6f5fd1677790109000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comThis commit changes HEMCO within CESM to be a runtime option controlled by the namelist variable use_hemco in phys_ctl_nl. - use_hemco is located in phys_ctl_nl as HEMCO routines may or may not run in physpkg.F90, the namelist variable controls it. - &phys_ctl_nl use_hemco will be set to .false. by default. - In compsets with modifier %HEMCO in long name, use_hemco will be set to .true. by default in these compsets. - The pre-processor variable HEMCO_CESM has been retired in favor of a runtime option use_hemco. 2023-03-02 15:48:29 -0500522795045bf2771eca5501083c9129f3d3c6f5fdThis commit changes HEMCO within CESM to be a runtime option controlled by the namelist variable use_hemco in phys_ctl_nl.editbld/configureeditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90editsrc/physics/cam/phys_control.F90editsrc/physics/cam/physpkg.F90editsrc/chemistry/mozart/mo_setext.F90editsrc/control/runtime_opts.F90editbld/build-namelisteditsrc/chemistry/mozart/chemistry.F90editbld/namelist_files/namelist_definition.xmleditsrc/chemistry/mozart/hco_cc_emissions.F90editbld/namelist_files/namelist_defaults_cam.xmleditsrc/chemistry/mozart/mo_chemini.F90bld/configuresrc/physics/cam/phys_control.F90src/chemistry/mozart/chemistry.F9056c1f6adbbb2f1f59dd0cb56cc0bb50617dbd0e21677794434000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFix dependencies. Still temporarily need to bring HEMCO_CESM as used upstream, will deprecate and remove in next HEMCO version. 2023-03-02 17:00:34 -050056c1f6adbbb2f1f59dd0cb56cc0bb50617dbd0e2Fix dependencies. Still temporarily need to bring HEMCO_CESM as used upstream, will deprecate and remove in next HEMCO version.editbld/configureeditsrc/chemistry/mozart/chemistry.F90editsrc/physics/cam/phys_control.F90Externals_CAM.cfgd9e9e2b7dd94f0ab9633cfa88cf9b72408f3b83c1677797405000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate HEMCO_CESM interface to upstream hemco-cesm1_1_1_hemco3_6_2 2023-03-02 17:50:05 -0500d9e9e2b7dd94f0ab9633cfa88cf9b72408f3b83cUpdate HEMCO_CESM interface to upstream hemco-cesm1_1_1_hemco3_6_2editExternals_CAM.cfgbld/namelist_files/namelist_definition.xmlExternals_CAM.cfgsrc/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/hetfrz_classnuc.F90bld/build-namelistbld/namelist_files/namelist_defaults_cam.xmlf8e1111f24deb19f1c3daee3f70d52619238a5ad1677870702000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd namelist options for frz scaling factors modified: Externals_CAM.cfg modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-03-03 12:11:42 -0700f8e1111f24deb19f1c3daee3f70d52619238a5adadd namelist options for frz scaling factorseditbld/namelist_files/namelist_definition.xmleditExternals_CAM.cfgeditbld/namelist_files/namelist_defaults_cam.xmleditsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/physics/cam/hetfrz_classnuc.F90editbld/build-namelistbld/namelist_files/namelist_definition.xmlsrc/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/microp_aero.F90bld/namelist_files/namelist_defaults_cam.xml6297d91ef5e79da74a2a8cc2db210336fd156a7f1677882348000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edubug fixes consistent with Simone's test runs modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml modified: src/physics/cam/hetfrz_classnuc_cam.F90 modified: src/physics/cam/microp_aero.F90 2023-03-03 15:25:48 -07006297d91ef5e79da74a2a8cc2db210336fd156a7fbug fixes consistent with Simone's test runseditbld/namelist_files/namelist_definition.xmleditsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/physics/cam/microp_aero.F90editbld/namelist_files/namelist_defaults_cam.xmlbld/build-namelistfd2f64148ae450c51ac2b668d1aebeed3f0c0fe71678149330000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate bld/build-namelist Co-authored-by: Francis Vitt <fvitt@ucar.edu> 2023-03-06 19:35:30 -0500fd2f64148ae450c51ac2b668d1aebeed3f0c0fe7Update bld/build-namelisteditbld/build-namelistsrc/chemistry/mozart/chemistry.F90e633c2a95f0daf0b6361b99476d6bfde9ba6d1841678208123000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduaqueous chemistry fix modified: src/chemistry/mozart/chemistry.F90 2023-03-07 09:55:23 -0700e633c2a95f0daf0b6361b99476d6bfde9ba6d184aqueous chemistry fixeditsrc/chemistry/mozart/chemistry.F90bld/namelist_files/namelist_defaults_cam.xmlcime_config/config_compsets.xmlfae81032a40b85d7b6f893e71099c059c25a0f0d1678224712000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate USE_ESMF_LIB default for %HEMCO compsets; sensible defaults in namelist_defaults 2023-03-07 16:31:52 -0500fae81032a40b85d7b6f893e71099c059c25a0f0dUpdate USE_ESMF_LIB default for %HEMCO compsets; sensible defaults in namelist_defaultseditbld/namelist_files/namelist_defaults_cam.xmleditcime_config/config_compsets.xmlsrc/control/cam_history.F90src/dynamics/mpas/dyn_grid.F90bld/namelist_files/namelist_definition.xmlsrc/control/budgets.F90doc/ChangeLog0f7a3cedb8dfbafbf3b3337fc4e5e5270f7ab5371678225151000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR cleanup, ChangeLog wording 2023-03-07 14:39:11 -07000f7a3cedb8dfbafbf3b3337fc4e5e5270f7ab537PR cleanup, ChangeLog wordingeditbld/namelist_files/namelist_definition.xmleditsrc/control/cam_history.F90editsrc/control/budgets.F90editdoc/ChangeLogeditsrc/dynamics/mpas/dyn_grid.F90src/chemistry/mozart/mo_gas_phase_chemdr.F90046804ee39cfc17189959873a5109515fce31da01678231469000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFix pbuf field check error if HEMCO is not enabled at runtime 2023-03-07 18:24:29 -0500046804ee39cfc17189959873a5109515fce31da0Fix pbuf field check error if HEMCO is not enabled at runtimeeditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90doc/ChangeLogac3d59b599e3439e3d5ce138d1f8eddfec1350a61678295484000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-03-08 10:11:24 -0700ac3d59b599e3439e3d5ce138d1f8eddfec1350a6ChangeLog updateeditdoc/ChangeLogbld/namelist_files/use_cases/2010_trop_strat_vbs_cam6.xmlbld/namelist_files/use_cases/2000_cam6.xmlcime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_definition.xmlbld/namelist_files/use_cases/2010_cam6.xmlExternals_CAM.cfgbld/namelist_files/use_cases/2000_trop_strat_vbs_cam6.xmlc88911091f755c5e7462744fdb66d8e15411dc171678308455000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comAdd hemco_emissions_year to hemco_nl. Updates HEMCO_CESM external to hemco-cesm1_1_2_hemco3_6_2. Add test cases into aux_cam and camchem_hco. This is to support the 2000climo and 2010 climo runs which should have a forced emissions year because RUN_STARTDATE begins from year 0001. Signed-off-by: Haipeng Lin <hplin@seas.harvard.edu> 2023-03-08 15:47:35 -0500c88911091f755c5e7462744fdb66d8e15411dc17Add hemco_emissions_year to hemco_nl. Updates HEMCO_CESM external to hemco-cesm1_1_2_hemco3_6_2.editbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/namelist_definition.xmleditbld/namelist_files/use_cases/2000_cam6.xmleditbld/namelist_files/use_cases/2000_trop_strat_vbs_cam6.xmleditcime_config/testdefs/testlist_cam.xmleditExternals_CAM.cfgeditbld/namelist_files/use_cases/2010_cam6.xmleditbld/namelist_files/use_cases/2010_trop_strat_vbs_cam6.xmldoc/ChangeLogafacbcb87433807d7ab41131974ac2eda529545c1678320958000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-03-08 17:15:58 -0700afacbcb87433807d7ab41131974ac2eda529545cChangeLog updateeditdoc/ChangeLogsrc/control/cam_history.F90src/physics/cam/physpkg.F90src/dynamics/se/stepon.F90doc/ChangeLogsrc/dynamics/se/dycore/prim_advance_mod.F90src/control/cam_history_buffers.F90src/dynamics/mpas/dp_coupling.F90src/dynamics/se/dycore/prim_driver_mod.F90src/control/budgets.F90src/dynamics/se/dyn_comp.F90src/dynamics/se/dp_coupling.F90src/physics/cam/check_energy.F90src/physics/cam/cam_diagnostics.F90src/dynamics/mpas/dyn_comp.F90a54262a1ad8bbdab6bd9fc996c16c6ebde2d5ce51678338316000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR cleanup 2023-03-08 22:05:16 -0700a54262a1ad8bbdab6bd9fc996c16c6ebde2d5ce5PR cleanupeditsrc/physics/cam/physpkg.F90editsrc/dynamics/se/dycore/prim_driver_mod.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/dynamics/se/stepon.F90editsrc/control/budgets.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/control/cam_history_buffers.F90editsrc/physics/cam/check_energy.F90editsrc/control/cam_history.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editdoc/ChangeLogeditsrc/dynamics/se/dp_coupling.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/dynamics/se/dyn_comp.F90bld/namelist_files/namelist_definition.xmlbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/hetfrz_classnuc_cam.F905fc03e1e8e8db8f0a52ed2068d0f601159bdfef41678456106000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educonsistent calc of BC coated fraction; BC scaling set to 0.01 modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-03-10 06:48:26 -07005fc03e1e8e8db8f0a52ed2068d0f601159bdfef4consistent calc of BC coated fraction; BC scaling set to 0.01editbld/namelist_files/namelist_definition.xmleditbld/namelist_files/namelist_defaults_cam.xmleditsrc/physics/cam/hetfrz_classnuc_cam.F90bld/namelist_files/namelist_definition.xmlsrc/cpl/nuopc/atm_import_export.F90bld/build-namelistcime_config/buildnmldoc/ChangeLogcime_config/config_component.xmle74c4a21ac378738e1f7209e2673f01df1490f581678458868000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edumerge mvertens feature/remove_sst_specs branch; revert build-namelist; misc 2023-03-10 09:34:28 -0500e74c4a21ac378738e1f7209e2673f01df1490f58merge mvertens feature/remove_sst_specs branch; revert build-namelist; misceditdoc/ChangeLogeditcime_config/config_component.xmleditbld/namelist_files/namelist_definition.xmleditsrc/cpl/nuopc/atm_import_export.F90editbld/build-namelisteditcime_config/buildnmlsrc/physics/cam/hetfrz_classnuc.F903f5668f5f84ab91f08462ea1775ee1befd4975271678461742000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrect comments modified: src/physics/cam/hetfrz_classnuc.F90 2023-03-10 08:22:22 -07003f5668f5f84ab91f08462ea1775ee1befd497527correct commentseditsrc/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc.F90src/physics/cam/hetfrz_classnuc_cam.F9026b1e87f823ae7ec981876b1693dbfb106ff287d1678483714000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduminor cleanup modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-03-10 14:28:34 -070026b1e87f823ae7ec981876b1693dbfb106ff287dminor cleanupeditsrc/physics/cam/hetfrz_classnuc.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/mo_gas_phase_chemdr.F9067bf8c831cea617abcc515bcf9311440a5db557f1678488657000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comapply gas drydep to ptend for cam_dev 2023-03-10 15:50:57 -070067bf8c831cea617abcc515bcf9311440a5db557fapply gas drydep to ptend for cam_deveditsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_gas_phase_chemdr.F90src/physics/cam/clubb_intr.F909cc7ec7cb42499bc1d4bec72b57a67af0cce04db1678488926000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.compossible clubb bug fix 2023-03-10 15:55:26 -07009cc7ec7cb42499bc1d4bec72b57a67af0cce04dbpossible clubb bug fixeditsrc/physics/cam/clubb_intr.F90src/chemistry/mozart/mo_gas_phase_chemdr.F90666f02a4fb465629477d15b06e3acd6759f29a021678491073000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comforgot to include is_physpkg use statement 2023-03-10 16:31:13 -0700666f02a4fb465629477d15b06e3acd6759f29a02forgot to include is_physpkg use statementeditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90src/chemistry/mozart/mo_gas_phase_chemdr.F90src/chemistry/mozart/chemistry.F90a7af16dabe09535b21ab9175d5169175e0364e9c1678491623000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comremove rpdeldry from mo_gas subr argument 2023-03-10 16:40:23 -0700a7af16dabe09535b21ab9175d5169175e0364e9cremove rpdeldry from mo_gas subr argumenteditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90editsrc/chemistry/mozart/chemistry.F90doc/ChangeLog848163e24b7a13a463427f36bea835f2aee3fa851678543131000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-03-11 06:58:51 -0700848163e24b7a13a463427f36bea835f2aee3fa85ChangeLog drafteditdoc/ChangeLogsrc/physics/cam/clubb_intr.F9015c4946089b3c0c24125f2cf177c0ee00a6b73d01678720480000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comrevert clubb emissions changes 2023-03-13 09:14:40 -060015c4946089b3c0c24125f2cf177c0ee00a6b73d0revert clubb emissions changeseditsrc/physics/cam/clubb_intr.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/mo_gas_phase_chemdr.F9088f8431b2e4490e0711a0d739a6126f37d3b30881678721249000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comensure correct dry/wet basis expected in ptend array 2023-03-13 09:27:29 -060088f8431b2e4490e0711a0d739a6126f37d3b3088ensure correct dry/wet basis expected in ptend arrayeditsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_gas_phase_chemdr.F90src/physics/cam/clubb_intr.F90eb2e38fe4636a55eebc75c053c951aa4f9b682ab1678721620000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadjust comment 2023-03-13 09:33:40 -0600eb2e38fe4636a55eebc75c053c951aa4f9b682abadjust commenteditsrc/physics/cam/clubb_intr.F90doc/ChangeLogb4f55cb016876165e0b2a26784097994d0f3cc581678813443000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate ChangeLog 2023-03-14 13:04:03 -0400b4f55cb016876165e0b2a26784097994d0f3cc58update ChangeLogeditdoc/ChangeLogdoc/ChangeLog72e2913d38dd16cf9e1761bf35d4a8245729f4071678815408000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduadd full issue path to ChangeLog 2023-03-14 13:36:48 -040072e2913d38dd16cf9e1761bf35d4a8245729f407add full issue path to ChangeLogeditdoc/ChangeLogdoc/ChangeLogsrc/chemistry/mozart/mo_gas_phase_chemdr.F903610b6cdd4f99417b3d039ae958f7f5f7261e3091678896046000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate to cam6_3_098; fix comment; start ChangeLog 2023-03-15 12:00:46 -04003610b6cdd4f99417b3d039ae958f7f5f7261e309update to cam6_3_098; fix comment; start ChangeLogeditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90editdoc/ChangeLogdoc/ChangeLoga7f7ca3a63006b2762d243c7509c6e71e7d10e9e1678981022000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate ChangeLog 2023-03-16 11:37:02 -0400a7f7ca3a63006b2762d243c7509c6e71e7d10e9eupdate ChangeLogeditdoc/ChangeLogsrc/chemistry/mozart/hco_cc_emissions.F901548de695423909e6d86c9efa8d952dcdf0ab37a1678995679000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comMinor fix: Remove excessive debug prints on other CPUs 2023-03-16 15:41:19 -04001548de695423909e6d86c9efa8d952dcdf0ab37aMinor fix: Remove excessive debug prints on other CPUseditsrc/chemistry/mozart/hco_cc_emissions.F90src/chemistry/pp_ghg_mam4/mo_exp_sol.F90bld/build-namelistsrc/chemistry/pp_ghg_mam4/mo_setrxt.F90src/chemistry/pp_ghg_mam4/mo_lu_factor.F90src/chemistry/pp_ghg_mam4/chem_mods.F90bld/configuresrc/chemistry/pp_ghg_mam4/mo_adjrxt.F90src/chemistry/pp_ghg_mam4/mo_lin_matrix.F90src/chemistry/pp_ghg_mam4/mo_nln_matrix.F90src/chemistry/pp_ghg_mam4/mo_prod_loss.F90bld/config_files/definition.xmlsrc/chemistry/pp_ghg_mam4/mo_indprd.F90src/chemistry/pp_ghg_mam4/mo_rxt_rates_conv.F90src/chemistry/pp_ghg_mam4/mo_sim_dat.F90bld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/pp_ghg_mam4/m_rxt_id.F90bld/namelist_files/namelist_definition.xmlsrc/chemistry/pp_ghg_mam4/chem_mech.insrc/chemistry/pp_ghg_mam4/mo_imp_sol.F90src/chemistry/pp_ghg_mam4/m_spc_id.F90src/chemistry/pp_ghg_mam4/chem_mech.docsrc/chemistry/pp_ghg_mam4/mo_phtadj.F90src/chemistry/pp_ghg_mam4/mo_lu_solve.F90cc6c68481c65839dc5eebb010d18938f781fe2481679059207000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduIntroduce ghg_mam4 chemistry mechanism new file: src/chemistry/pp_ghg_mam4/chem_mech.doc new file: src/chemistry/pp_ghg_mam4/chem_mech.in new file: src/chemistry/pp_ghg_mam4/chem_mods.F90 new file: src/chemistry/pp_ghg_mam4/m_rxt_id.F90 new file: src/chemistry/pp_ghg_mam4/m_spc_id.F90 new file: src/chemistry/pp_ghg_mam4/mo_adjrxt.F90 new file: src/chemistry/pp_ghg_mam4/mo_exp_sol.F90 new file: src/chemistry/pp_ghg_mam4/mo_imp_sol.F90 new file: src/chemistry/pp_ghg_mam4/mo_indprd.F90 new file: src/chemistry/pp_ghg_mam4/mo_lin_matrix.F90 new file: src/chemistry/pp_ghg_mam4/mo_lu_factor.F90 new file: src/chemistry/pp_ghg_mam4/mo_lu_solve.F90 new file: src/chemistry/pp_ghg_mam4/mo_nln_matrix.F90 new file: src/chemistry/pp_ghg_mam4/mo_phtadj.F90 new file: src/chemistry/pp_ghg_mam4/mo_prod_loss.F90 new file: src/chemistry/pp_ghg_mam4/mo_rxt_rates_conv.F90 new file: src/chemistry/pp_ghg_mam4/mo_setrxt.F90 new file: src/chemistry/pp_ghg_mam4/mo_sim_dat.F90 modified: bld/build-namelist modified: bld/config_files/definition.xml modified: bld/configure modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml 2023-03-17 07:20:07 -0600cc6c68481c65839dc5eebb010d18938f781fe248Introduce ghg_mam4 chemistry mechanismaddsrc/chemistry/pp_ghg_mam4/mo_phtadj.F90addsrc/chemistry/pp_ghg_mam4/mo_lin_matrix.F90addsrc/chemistry/pp_ghg_mam4/mo_rxt_rates_conv.F90addsrc/chemistry/pp_ghg_mam4/mo_prod_loss.F90editbld/build-namelisteditbld/namelist_files/namelist_defaults_cam.xmladdsrc/chemistry/pp_ghg_mam4/mo_setrxt.F90editbld/configureaddsrc/chemistry/pp_ghg_mam4/m_spc_id.F90addsrc/chemistry/pp_ghg_mam4/mo_lu_factor.F90editbld/config_files/definition.xmladdsrc/chemistry/pp_ghg_mam4/mo_lu_solve.F90addsrc/chemistry/pp_ghg_mam4/mo_imp_sol.F90addsrc/chemistry/pp_ghg_mam4/chem_mods.F90addsrc/chemistry/pp_ghg_mam4/mo_adjrxt.F90addsrc/chemistry/pp_ghg_mam4/chem_mech.docaddsrc/chemistry/pp_ghg_mam4/mo_indprd.F90editbld/namelist_files/namelist_definition.xmladdsrc/chemistry/pp_ghg_mam4/m_rxt_id.F90addsrc/chemistry/pp_ghg_mam4/mo_exp_sol.F90addsrc/chemistry/pp_ghg_mam4/chem_mech.inaddsrc/chemistry/pp_ghg_mam4/mo_nln_matrix.F90addsrc/chemistry/pp_ghg_mam4/mo_sim_dat.F90cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_camcime_config/testdefs/testlist_cam.xmlcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_camc8bda993f23ca4d60cdde0d30c26861f32a436581679065750000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edughg_cam test renamed: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc -> cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev modified: cime_config/testdefs/testlist_cam.xml modified: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/shell_commands modified: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_cam 2023-03-17 09:09:10 -0600c8bda993f23ca4d60cdde0d30c26861f32a43658ghg_cam testaddcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_clmaddcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_clmeditcime_config/testdefs/testlist_cam.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_L32wsc/user_nl_camdoc/ChangeLogc46288ec9b821ee6fda5f79e674d52fc596d48861679066903000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-03-17 09:28:23 -0600c46288ec9b821ee6fda5f79e674d52fc596d4886ChangeLog drafteditdoc/ChangeLogsrc/chemistry/aerosol/modal_aerosol_state_mod.F90src/physics/cam/hetfrz_classnuc_cam.F90src/physics/cam/hetfrz_classnuc.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F904147bc570dfa5c0d8136ee0e088f9fa1c0516fa51679081682000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduhacks for debuging... modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 modified: src/physics/cam/hetfrz_classnuc.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-03-17 13:34:42 -06004147bc570dfa5c0d8136ee0e088f9fa1c0516fa5hacks for debuging...editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/physics/cam/hetfrz_classnuc.F90doc/ChangeLogff7debe86cf6ecbaf0d003d5bdc0226826f7c1a41679092985000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comChangelog for 099 because git is unable to merge 2023-03-17 16:43:05 -0600ff7debe86cf6ecbaf0d003d5bdc0226826f7c1a4Changelog for 099 because git is unable to mergeeditdoc/ChangeLogdoc/ChangeLogsrc/physics/cam_dev/physpkg.F9003097ad390e3d6d51bd9558737f0227268edafa81679093297000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comupdate ChangeLog and rename calc_te routines in cam_dev for budgets 2023-03-17 16:48:17 -060003097ad390e3d6d51bd9558737f0227268edafa8update ChangeLog and rename calc_te routines in cam_dev for budgetseditsrc/physics/cam_dev/physpkg.F90editdoc/ChangeLogbld/configurecime_config/config_component.xmlbld/namelist_files/namelist_defaults_cam.xmlcime_config/config_compsets.xml6aac03923eda229f546a8fd509bb31027224725c1679095174000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFirst compset changes - not complete 2023-03-17 17:19:34 -06006aac03923eda229f546a8fd509bb31027224725cFirst compset changes - not completeeditcime_config/config_component.xmleditcime_config/config_compsets.xmleditbld/namelist_files/namelist_defaults_cam.xmleditbld/configurebld/namelist_files/namelist_defaults_cam.xml6be20278a689844a448ed53d7b179d45e4d26e631679103080000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate default flbc_file for ghg_mam4 chem 2023-03-17 19:31:20 -06006be20278a689844a448ed53d7b179d45e4d26e63update default flbc_file for ghg_mam4 chemeditbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/hetfrz_classnuc.F909487858b0530f91084b5be9a0980cfbf555aa29e1679338739000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse constants from physconst -- changes answers larger than roundoff modified: src/physics/cam/hetfrz_classnuc.F90 2023-03-20 12:58:59 -06009487858b0530f91084b5be9a0980cfbf555aa29euse constants from physconst -- changes answers larger than roundoffeditsrc/physics/cam/hetfrz_classnuc.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/physics/cam/hetfrz_classnuc_cam.F90c585a2f9485bbea4eb65200abf0f5a61aa89162b1679343953000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educode clean up modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-03-20 14:25:53 -0600c585a2f9485bbea4eb65200abf0f5a61aa89162bcode clean upeditsrc/physics/cam/hetfrz_classnuc_cam.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90doc/ChangeLog0054c35f56285504770733a56df1f63e36b3ca6d1679347705000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2023-03-20 15:28:25 -06000054c35f56285504770733a56df1f63e36b3ca6dupdate ChangeLogeditdoc/ChangeLogsrc/chemistry/aerosol/aerosol_properties_mod.F900b28cc72be6bcd2de7c4d83bed9cac5aa11d776d1679350119000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremoved unused vars modified: src/chemistry/aerosol/aerosol_properties_mod.F90 2023-03-20 16:08:39 -06000b28cc72be6bcd2de7c4d83bed9cac5aa11d776dremoved unused varseditsrc/chemistry/aerosol/aerosol_properties_mod.F90bld/configurebld/build-namelistbld/namelist_files/namelist_defaults_cam.xmlbld/config_files/definition.xmld5249d9e0967c42829daa5104b87f7933fc3d3941679350283000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduMore compset additons 2023-03-20 16:11:23 -0600d5249d9e0967c42829daa5104b87f7933fc3d394More compset additonseditbld/build-namelisteditbld/namelist_files/namelist_defaults_cam.xmleditbld/configureeditbld/config_files/definition.xmlsrc/dynamics/se/dycore/prim_advance_mod.F901bac31539fa3c26820fa29030b186254f3bd3c0c1679414152000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduturn on physical frictional heating (WACCM-x) 2023-03-21 09:55:52 -06001bac31539fa3c26820fa29030b186254f3bd3c0cturn on physical frictional heating (WACCM-x)editsrc/dynamics/se/dycore/prim_advance_mod.F90bld/build-namelistcime_config/config_component.xmlbld/namelist_files/use_cases/hist_cam_lt.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/configurebld/namelist_files/use_cases/hist_cam_mt.xmlcime_config/config_compsets.xmlbld/config_files/definition.xml7980f1dccf57c653b87fa3715cd2d8619259ae751679429886000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edurevert use of model_top; add use case files 2023-03-21 16:18:06 -04007980f1dccf57c653b87fa3715cd2d8619259ae75revert use of model_top; add use case fileseditbld/build-namelistaddbld/namelist_files/use_cases/hist_cam_lt.xmleditcime_config/config_component.xmleditcime_config/config_compsets.xmleditbld/config_files/definition.xmladdbld/namelist_files/use_cases/hist_cam_mt.xmleditbld/namelist_files/namelist_defaults_cam.xmleditbld/configurecime_config/config_component.xmlc7e5b5f9184befb4a4e06e874352135bbd77f3991679431771000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edufix description of %LT %MT 2023-03-21 16:49:31 -0400c7e5b5f9184befb4a4e06e874352135bbd77f399fix description of %LT %MTeditcime_config/config_component.xmlsrc/chemistry/mozart/mo_lightning.F9075ba203b93c74650451e485d944ab2917adf19ae1679438116000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurestore factor setting modified: src/chemistry/mozart/mo_lightning.F90 2023-03-21 16:35:16 -060075ba203b93c74650451e485d944ab2917adf19aerestore factor settingeditsrc/chemistry/mozart/mo_lightning.F90src/dynamics/se/dycore/prim_advance_mod.F9074d3a2d081db811e6bd845844086db0542517b641679497518000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edubug in previous commit 2023-03-22 09:05:18 -060074d3a2d081db811e6bd845844086db0542517b64bug in previous commiteditsrc/dynamics/se/dycore/prim_advance_mod.F90src/utils/air_composition.F90src/physics/simple/physpkg.F90169a28cf2d2aa274fa8ca4989f7389f4872644921679497839000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edunew energy code in simple physics 2023-03-22 09:10:39 -0600169a28cf2d2aa274fa8ca4989f7389f487264492new energy code in simple physicseditsrc/utils/air_composition.F90editsrc/physics/simple/physpkg.F90src/dynamics/se/dyn_comp.F90src/dynamics/se/dycore_budget.F90632731ee80df09ef99168772d72a562fa2830d5b1679507889000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.educleanup (variable names se/dyn_comp.F90 and log file code) 2023-03-22 11:58:09 -0600632731ee80df09ef99168772d72a562fa2830d5bcleanup (variable names se/dyn_comp.F90 and log file code)editsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/se/dycore_budget.F90src/dynamics/se/dyn_comp.F90fd16ddb1bcc1614802b1ba6035460049181f0af71679508339000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduremove outcommented code 2023-03-22 12:05:39 -0600fd16ddb1bcc1614802b1ba6035460049181f0af7remove outcommented codeeditsrc/dynamics/se/dyn_comp.F90src/dynamics/se/dycore_budget.F90d7297e3e744acc90e807547a7c9501a5a09fecf21679523560000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edubeautify log file energy output 2023-03-22 16:19:20 -0600d7297e3e744acc90e807547a7c9501a5a09fecf2beautify log file energy outputeditsrc/dynamics/se/dycore_budget.F90src/chemistry/mozart/mo_lightning.F902eb1ca088930fed69c42250ce0803e0b60a93b5d1679599658000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd LGHTNG_CLD2GRND diag modified: src/chemistry/mozart/mo_lightning.F90 2023-03-23 13:27:38 -06002eb1ca088930fed69c42250ce0803e0b60a93b5dadd LGHTNG_CLD2GRND diageditsrc/chemistry/mozart/mo_lightning.F90src/chemistry/mozart/mo_lightning.F90bld/build-namelist5e75733b8d2e4ea29ea456916f866da06db611a81679609919000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrect calc_nox_prod logic; misc clean up modified: src/chemistry/mozart/mo_lightning.F90 2023-03-23 16:18:39 -06005e75733b8d2e4ea29ea456916f866da06db611a8correct calc_nox_prod logic; misc clean upeditsrc/chemistry/mozart/mo_lightning.F90editbld/build-namelistsrc/chemistry/mozart/mo_lightning.F9062edc57358ca8335863c94606390c049ef603d941679611556000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduminor cleanup 2023-03-23 16:45:56 -060062edc57358ca8335863c94606390c049ef603d94minor cleanupeditsrc/chemistry/mozart/mo_lightning.F90bld/build-namelistf75b772a13310cfee9d1725b472b88e145b1cdf51679672397000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurevert setting of lght_no_prd_factor modified: bld/build-namelist 2023-03-24 09:39:57 -0600f75b772a13310cfee9d1725b472b88e145b1cdf5revert setting of lght_no_prd_factoreditbld/build-namelistsrc/physics/cam/physics_types.F90src/physics/cam/geopotential.F9066ce3c82ca2bd51582a044407d76bad480d1793c1679689400000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduhack to get bit-for-bit for FV, FV3, EUL 2023-03-24 14:23:20 -060066ce3c82ca2bd51582a044407d76bad480d1793chack to get bit-for-bit for FV, FV3, EULeditsrc/physics/cam/physics_types.F90editsrc/physics/cam/geopotential.F90src/physics/cam/physpkg.F90src/physics/cam_dev/physpkg.F9050f847d74a8e8f7729e10a1d44bc8ad8ccda2dfc1679689451000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edusome code clean-up 2023-03-24 14:24:11 -060050f847d74a8e8f7729e10a1d44bc8ad8ccda2dfcsome code clean-upeditsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/physpkg.F90src/dynamics/se/dyn_comp.F90src/physics/cam/cam_diagnostics.F90src/dynamics/se/dycore_budget.F9093f251393f68da6df18ea2a15de20b5869a299ee1679697559000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edubeautiful physics energy names 2023-03-24 16:39:19 -060093f251393f68da6df18ea2a15de20b5869a299eebeautiful physics energy nameseditsrc/dynamics/se/dyn_comp.F90editsrc/physics/cam/cam_diagnostics.F90editsrc/dynamics/se/dycore_budget.F90src/chemistry/aerosol/modal_aerosol_state_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F902171325af3b85ba668386df70ca78bb582de8f4e1679923291000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimplement minimum mass mean radius modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_state_mod.F90 2023-03-27 07:21:31 -06002171325af3b85ba668386df70ca78bb582de8f4eimplement minimum mass mean radiuseditsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/modal_aerosol_state_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90src/control/budgets.F90src/dynamics/mpas/dyn_grid.F90src/dynamics/se/dycore/prim_advance_mod.F9025394dccdc7c123451ba41f5f2af300d4bc156c11679946541000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comsome refactor and fix bug with area weights for MPAS - normalized to 1 by dividing by 4*pi 2023-03-27 13:49:01 -060025394dccdc7c123451ba41f5f2af300d4bc156c1some refactor and fix bug with area weights for MPAS - normalized to 1 by dividing by 4*pieditsrc/control/budgets.F90editsrc/dynamics/mpas/dyn_grid.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90bld/namelist_files/use_cases/hist_cam_lt.xmlaee9c2b09f53592a0982fdbf4120f8c89ae0c05d1679950818000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate FLTHIST_v0a settings 2023-03-27 15:00:18 -0600aee9c2b09f53592a0982fdbf4120f8c89ae0c05dUpdate FLTHIST_v0a settingseditbld/namelist_files/use_cases/hist_cam_lt.xmlbld/namelist_files/use_cases/hist_cam_lt.xmlf12ef7400bfce329273467442f2071a0881133891679952594000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate prescribed_ozone_file 2023-03-27 15:29:54 -0600f12ef7400bfce329273467442f2071a088113389Update prescribed_ozone_fileeditbld/namelist_files/use_cases/hist_cam_lt.xmlsrc/dynamics/se/dyn_comp.F90src/dynamics/se/dycore_budget.F90da42b8d2531964122dd3fb463a2980608e56d5431679956538000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.educlearer naming convention in SE dycore_budget.F90 code 2023-03-27 16:35:38 -0600da42b8d2531964122dd3fb463a2980608e56d543clearer naming convention in SE dycore_budget.F90 codeeditsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/se/dycore_budget.F90src/control/cam_history.F908c8618bccf31a365dc4c1e92bd1c4b5380f5502c1679964358000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.combug fix for budgets, need to normalize before creating a composed field 2023-03-27 18:45:58 -06008c8618bccf31a365dc4c1e92bd1c4b5380f5502cbug fix for budgets, need to normalize before creating a composed fieldeditsrc/control/cam_history.F90bld/namelist_files/use_cases/hist_cam_lt.xml7cf7bfa992c9fd2278c45c325b49cd13c180b8a71679968873000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edumerge waccm_sc_hist_cam6 settings into hist_cam_lt 2023-03-27 22:01:13 -04007cf7bfa992c9fd2278c45c325b49cd13c180b8a7merge waccm_sc_hist_cam6 settings into hist_cam_lteditbld/namelist_files/use_cases/hist_cam_lt.xmlbld/configurecime_config/config_component.xmlbld/namelist_files/use_cases/hist_cam_lt.xmlcime_config/config_compsets.xmla74c93976c0a8cc77aeef5258d61a3c875705f601680026488000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduaddress review comments 2023-03-28 14:01:28 -0400a74c93976c0a8cc77aeef5258d61a3c875705f60address review commentseditbld/configureeditbld/namelist_files/use_cases/hist_cam_lt.xmleditcime_config/config_component.xmleditcime_config/config_compsets.xmlcime_config/config_component.xml11e91e1ca64707643f0a7b815d870133aeeda6771680107714000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd missing descriptions 2023-03-29 10:35:14 -060011e91e1ca64707643f0a7b815d870133aeeda677Add missing descriptionseditcime_config/config_component.xmlsrc/physics/simple/frierson.F90src/physics/simple/frierson_cam.F90bld/build-namelistcime_config/testdefs/testlist_cam.xmlcime_config/config_component.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/configurebld/namelist_files/use_cases/dctest_frierson.xmlsrc/control/cam_control_mod.F90cime_config/config_compsets.xmlbld/config_files/definition.xml8f9e83853593b66dcf89931b6c66eebefb10244c1680131195000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduChange to FGRAYRAD and add a number of gray_XXX output variables 2023-03-29 17:06:35 -06008f9e83853593b66dcf89931b6c66eebefb10244cChange to FGRAYRAD and add a number of gray_XXX output variableseditcime_config/config_compsets.xmleditsrc/physics/simple/frierson_cam.F90editbld/build-namelisteditbld/namelist_files/namelist_defaults_cam.xmleditsrc/physics/simple/frierson.F90editcime_config/testdefs/testlist_cam.xmleditbld/config_files/definition.xmleditcime_config/config_component.xmleditbld/namelist_files/use_cases/dctest_frierson.xmleditsrc/control/cam_control_mod.F90editbld/configuresrc/physics/cam_dev/physpkg.F90cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_camb57ff3e5cfe617bf3318f68503174ccf37014b361680189832000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educall phys_grid_ctem from cam_dev/physpkg modified: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_cam modified: src/physics/cam_dev/physpkg.F90 2023-03-30 09:23:52 -0600b57ff3e5cfe617bf3318f68503174ccf37014b36call phys_grid_ctem from cam_dev/physpkgeditcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_cameditsrc/physics/cam_dev/physpkg.F90bld/build-namelist3812ed55a2f65a6a9092a856eb1d3055d78040741680197335000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumove setting of namelist options from "Write output files" section modified: bld/build-namelist 2023-03-30 11:28:55 -06003812ed55a2f65a6a9092a856eb1d3055d7804074move setting of namelist options from "Write output files" sectioneditbld/build-namelistbld/configureExternals_CAM.cfgcime_config/config_component.xmlcime_config/config_compsets.xml0c4860183d5b0ec8efe9d24121e43a3e81cfb1c91680227955000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edurevert cam_dev default chem to trop_mam4; update clubb/silhs external 2023-03-30 21:59:15 -04000c4860183d5b0ec8efe9d24121e43a3e81cfb1c9revert cam_dev default chem to trop_mam4; update clubb/silhs externaleditbld/configureeditcime_config/config_compsets.xmleditExternals_CAM.cfgeditcime_config/config_component.xmldoc/ChangeLog8febd2d60ed51da101bfb8b92d2e860ed8ed1b771680286618000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduCreate ChangeLog for cam6_3_101 2023-03-31 12:16:58 -06008febd2d60ed51da101bfb8b92d2e860ed8ed1b77Create ChangeLog for cam6_3_101editdoc/ChangeLogcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_camsrc/physics/cam/phys_grid_ctem.F90b26145df0032620510cf715af4e89844172185101680288648000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduUse zm history field names; include zm wind and TH output fields modified: cime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_cam modified: cime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_cam modified: cime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_cam modified: cime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_cam modified: src/physics/cam/phys_grid_ctem.F90 2023-03-31 12:50:48 -0600b26145df0032620510cf715af4e8984417218510Use zm history field names; include zm wind and TH output fieldseditcime_config/testdefs/testmods_dirs/cam/outfrq9s_physgrid_tem_1deg/user_nl_cameditcime_config/testdefs/testmods_dirs/cam/outfrq1d_14dec_ghg_cam_dev/user_nl_cameditcime_config/testdefs/testmods_dirs/cam/outfrq1d_physgrid_tem_mpasa120_wcmsc/user_nl_cameditcime_config/testdefs/testmods_dirs/cam/outfrq3s_physgrid_tem/user_nl_cameditsrc/physics/cam/phys_grid_ctem.F90src/physics/cam/check_energy.F909512833fb1a5b09541e6d001b344e3dedd3a86de1680294328000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edufix energy diagnostic bug 2023-03-31 14:25:28 -06009512833fb1a5b09541e6d001b344e3dedd3a86defix energy diagnostic bugeditsrc/physics/cam/check_energy.F90src/dynamics/mpas/dycore_budget.F90src/dynamics/se/dycore_budget.F90e2a759d62a21218944d6e3522c55cf2c7bfbedf31680294341000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edufurther improvements and unification of logfile energy output 2023-03-31 14:25:41 -0600e2a759d62a21218944d6e3522c55cf2c7bfbedf3further improvements and unification of logfile energy outputeditsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/se/dycore_budget.F90src/physics/cam_dev/convect_diagnostics.F907294eadf83df09461bb4b035eccba2bf5cf265971680297183000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comAdding four fields from cam/convect_shallow.F90 to cam_dev/convect_diagnostics.F90 in order to make cam_dev compatible with cosp. 2023-03-31 15:13:03 -06007294eadf83df09461bb4b035eccba2bf5cf26597Adding four fields from cam/convect_shallow.F90 to cam_dev/convect_diagnostics.F90 ineditsrc/physics/cam_dev/convect_diagnostics.F90src/physics/cam/phys_grid_ctem.F90e04f7e2a9f40813038d20c11afd461acead568bc1680297450000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduneed unique hist grid id ; correct wthza modified: src/physics/cam/phys_grid_ctem.F90 2023-03-31 15:17:30 -0600e04f7e2a9f40813038d20c11afd461acead568bcneed unique hist grid id ; correct wthzaeditsrc/physics/cam/phys_grid_ctem.F90src/physics/cam_dev/physpkg.F90src/physics/cam_dev/convect_diagnostics.F90ea7f5af369ac175499dfb3894626481f662366df1680299042000http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephensbenjamin.andrew.stephens@gmail.comAdditional changes to initialize fields to zero. See issue https://github.com/ESCOMP/CAM/issues/776. 2023-03-31 15:44:02 -0600ea7f5af369ac175499dfb3894626481f662366dfAdditional changes to initialize fields to zero. See issue https://github.com/ESCOMP/CAM/issues/776.editsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam_dev/convect_diagnostics.F90src/physics/simple/frierson.F90src/physics/simple/frierson_cam.F90d233807b6f93cf8943dc914a9f64b7dede3dabd21680299754000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd three new output fields 2023-03-31 15:55:54 -0600d233807b6f93cf8943dc914a9f64b7dede3dabd2Add three new output fieldseditsrc/physics/simple/frierson.F90editsrc/physics/simple/frierson_cam.F90bld/namelist_files/use_cases/dctest_frierson.xml220e7b3303f89fd4a35a6dc3f31e9b948a0fd0c71680304516000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduoutput new variables 2023-03-31 17:15:16 -0600220e7b3303f89fd4a35a6dc3f31e9b948a0fd0c7output new variableseditbld/namelist_files/use_cases/dctest_frierson.xmlsrc/physics/cam/phys_grid_ctem.F903aa8f088b41af26e31b3eb4c5d43545c288d1c1c1680535506000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrections to history field descriptions modified: src/physics/cam/phys_grid_ctem.F90 2023-04-03 09:25:06 -06003aa8f088b41af26e31b3eb4c5d43545c288d1c1ccorrections to history field descriptionseditsrc/physics/cam/phys_grid_ctem.F90src/dynamics/se/dyn_comp.F90src/dynamics/mpas/dyn_comp.F90src/dynamics/mpas/dycore_budget.F901fdb5344ad09448a2d184cb47818961190c0c0ff1680537504000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.educlean-up 2023-04-03 09:58:24 -06001fdb5344ad09448a2d184cb47818961190c0c0ffclean-upeditsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/mpas/dyn_comp.F90src/chemistry/mozart/chemistry.F9070416526d53b72827745dd5a0b438f51ba61ada31680555630000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduInitialize CO2 when not available in initial conditions file 2023-04-03 15:00:30 -060070416526d53b72827745dd5a0b438f51ba61ada3Initialize CO2 when not available in initial conditions fileeditsrc/chemistry/mozart/chemistry.F90doc/ChangeLog19f2ecc39543f431b5de952d3bd46ddc93ed23a91680557050000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-04-03 15:24:10 -060019f2ecc39543f431b5de952d3bd46ddc93ed23a9ChangeLog drafteditdoc/ChangeLogdoc/ChangeLogc7582f689a78e5649aace1d9d9239393b1d4ebbe1680619029000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-04-04 08:37:09 -0600c7582f689a78e5649aace1d9d9239393b1d4ebbeChangeLog updateeditdoc/ChangeLogsrc/physics/cam/cospsimulator_intr.F90src/physics/cam_dev/physpkg.F90src/physics/cam_dev/convect_diagnostics.F90a8de891e1a612370045409a76525dca4059797ac1680638851000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edurevert pbuf changes in convect_diagnostics; add pbuf checks in cospsimulator_intr 2023-04-04 16:07:31 -0400a8de891e1a612370045409a76525dca4059797acrevert pbuf changes in convect_diagnostics; add pbuf checks in cospsimulator_intreditsrc/physics/cam_dev/convect_diagnostics.F90editsrc/physics/cam/cospsimulator_intr.F90editsrc/physics/cam_dev/physpkg.F90Externals.cfgdf2ea66e2bea861917369505b70ca05d6b1684d81680642777000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate externals to almost match cesm2_3_alpha12d 2023-04-04 15:12:57 -0600df2ea66e2bea861917369505b70ca05d6b1684d8Update externals to almost match cesm2_3_alpha12deditExternals.cfgcime_config/config_component.xmlbld/namelist_files/use_cases/2000_cam_dev.xmlsrc/chemistry/mozart/tracer_cnst.F9025e889d8915b1a18257a930a5035f057291cbbd21680647927000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduintroduce 2000_cam_dev use case file; add error checking modified: cime_config/config_component.xml modified: src/chemistry/mozart/tracer_cnst.F90 bld/namelist_files/use_cases/2000_cam_dev.xml 2023-04-04 16:38:47 -060025e889d8915b1a18257a930a5035f057291cbbd2introduce 2000_cam_dev use case file; add error checkingeditcime_config/config_component.xmleditsrc/chemistry/mozart/tracer_cnst.F90addbld/namelist_files/use_cases/2000_cam_dev.xmlsrc/physics/cam/nucleate_ice_cam.F90c9c0cda1d37f273f0b997f5e7cc207126e2d15301680650010000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix issue with undefined values in rho modified: src/physics/cam/nucleate_ice_cam.F90 2023-04-04 17:13:30 -0600c9c0cda1d37f273f0b997f5e7cc207126e2d1530fix issue with undefined values in rhoeditsrc/physics/cam/nucleate_ice_cam.F90bld/namelist_files/use_cases/2000_cam_dev.xmlcime_config/config_component.xmlbld/namelist_files/use_cases/2000_cam6.xmlc8433392b67946f7efb06f4496adbe1f0986b9731680650126000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edushare 2000_cam6 between cam6 and cam_dev deleted: bld/namelist_files/use_cases/2000_cam_dev.xml modified: bld/namelist_files/use_cases/2000_cam6.xml modified: cime_config/config_component.xml 2023-04-04 17:15:26 -0600c8433392b67946f7efb06f4496adbe1f0986b973share 2000_cam6 between cam6 and cam_devdeletebld/namelist_files/use_cases/2000_cam_dev.xmleditbld/namelist_files/use_cases/2000_cam6.xmleditcime_config/config_component.xmlbld/namelist_files/use_cases/2000_cam6.xml7f78006e6685a30a693f75a3887d6cf4dc5376f51680659282000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurestore tracer_cnst_filelist setting modified: bld/namelist_files/use_cases/2000_cam6.xml 2023-04-04 19:48:02 -06007f78006e6685a30a693f75a3887d6cf4dc5376f5restore tracer_cnst_filelist settingeditbld/namelist_files/use_cases/2000_cam6.xmlcime_config/testdefs/testlist_cam.xmla97c4ad53104008b2de157059147ac051989d2461680696657000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd reg test 2023-04-05 06:10:57 -0600a97c4ad53104008b2de157059147ac051989d246add reg testeditcime_config/testdefs/testlist_cam.xmlsrc/dynamics/mpas/dp_coupling.F9052f55d15132ccaac641709d59d6ce052ac9295721680711242000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduremove old ifdef code 2023-04-05 10:14:02 -060052f55d15132ccaac641709d59d6ce052ac929572remove old ifdef codeeditsrc/dynamics/mpas/dp_coupling.F90src/dynamics/mpas/dp_coupling.F9033ef5e4b18c56a541d884312d5080ca6e89e6bd21680713656000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.educlean-up 2023-04-05 10:54:16 -060033ef5e4b18c56a541d884312d5080ca6e89e6bd2clean-upeditsrc/dynamics/mpas/dp_coupling.F90doc/ChangeLog9ad2757f7568c9ce2d2bf8820fcc5a72e93996d91680724475000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduChangeLog update for cam6_3_103 2023-04-05 13:54:35 -06009ad2757f7568c9ce2d2bf8820fcc5a72e93996d9ChangeLog update for cam6_3_103editdoc/ChangeLogdoc/ChangeLogbbe5e32a080d29d49a57fc5f63638a5e066994701680730108000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-04-05 15:28:28 -0600bbe5e32a080d29d49a57fc5f63638a5e06699470ChangeLog drafteditdoc/ChangeLogdoc/ChangeLog73b4dc9f0cd0500bb63c2d3701b6793db3409a5b1680744746000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog uptdate 2023-04-05 19:32:26 -060073b4dc9f0cd0500bb63c2d3701b6793db3409a5bChangeLog uptdateeditdoc/ChangeLogdoc/ChangeLog4b3ed749399be599ea422bf1e1cad7365c8f1d7c1680790562000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate ChangeLog 2023-04-06 10:16:02 -04004b3ed749399be599ea422bf1e1cad7365c8f1d7cupdate ChangeLogeditdoc/ChangeLogsrc/control/cam_history.F906fa7e93caaf8493be6c84f0a17c36cc43ae4528a1680819925000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edubug (identified by Jesse N.) 2023-04-06 16:25:25 -06006fa7e93caaf8493be6c84f0a17c36cc43ae4528abug (identified by Jesse N.)editsrc/control/cam_history.F90src/physics/cam_dev/physpkg.F90src/dynamics/mpas/dp_coupling.F90src/dynamics/se/dycore_budget.F90src/physics/cam/physpkg.F90src/dynamics/mpas/dycore_budget.F90src/dynamics/se/dp_coupling.F90730a00503574a84c575d54f2b46c660478d68b3f1680821887000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduscale temperature T and dtdt in physics rather than in dp_coupling so that dtcore and other diagnostics reflect the temperature increment in dynamics 2023-04-06 16:58:07 -0600730a00503574a84c575d54f2b46c660478d68b3fscale temperature T and dtdt in physics rather than in dp_coupling so that dtcore and other diagnostics reflect the temperature increment in dynamicseditsrc/dynamics/mpas/dycore_budget.F90editsrc/physics/cam_dev/physpkg.F90editsrc/dynamics/se/dp_coupling.F90editsrc/physics/cam/physpkg.F90editsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/mpas/dp_coupling.F90doc/ChangeLogf532ee1a3e5dabf4dbd0cbb6d175941714c74a271680822841000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate ChangeLog 2023-04-06 19:14:01 -0400f532ee1a3e5dabf4dbd0cbb6d175941714c74a27update ChangeLogeditdoc/ChangeLogsrc/physics/simple/physpkg.F90ecba35f76dccd3fc14bc1904f720bbccabd1d96e1680894701000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edusimple physics support for previous commit: "scale temperature T and dtdt in physics rather than in dp_coupling so that dtcore and other diagnostics reflect the temperature increment in dynamics" 2023-04-07 13:11:41 -0600ecba35f76dccd3fc14bc1904f720bbccabd1d96esimple physics support for previous commit: "scale temperature T and dtdt in physics rather than in dp_coupling so that dtcore and other diagnostics reflect the temperature increment in dynamics"editsrc/physics/simple/physpkg.F90bld/build-namelistsrc/dynamics/se/dycore/dimensions_mod.F90src/dynamics/se/dyn_comp.F90bld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_definition.xmlsrc/dynamics/se/dycore/prim_advection_mod.F90src/dynamics/se/dycore/control_mod.F90src/dynamics/se/dycore/prim_advance_mod.F90763a8ec8a28aecefdd2539172f9d6af6703dbf311680898626000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduremove se_phys_dyn_cp and se_cp_moist namelist vars and associated variables in code (no longer needed) 2023-04-07 14:17:06 -0600763a8ec8a28aecefdd2539172f9d6af6703dbf31remove se_phys_dyn_cp and se_cp_moist namelist vars and associated variables in code (no longer needed)editsrc/dynamics/se/dycore/prim_advance_mod.F90editbld/build-namelisteditsrc/dynamics/se/dycore/dimensions_mod.F90editsrc/dynamics/se/dycore/prim_advection_mod.F90editbld/namelist_files/namelist_definition.xmleditsrc/dynamics/se/dycore/control_mod.F90editbld/namelist_files/namelist_defaults_cam.xmleditsrc/dynamics/se/dyn_comp.F90src/physics/simple/physpkg.F90c47eb47f7f466e9a2165a7bd77e42b0e08fc12cb1680898736000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edufix initialization bug (from Truesdale) for simple physics energy budgets 2023-04-07 14:18:56 -0600c47eb47f7f466e9a2165a7bd77e42b0e08fc12cbfix initialization bug (from Truesdale) for simple physics energy budgetseditsrc/physics/simple/physpkg.F90src/dynamics/mpas/dycore_budget.F907d2db5bb399fbd73c263822156e3614527e722d71680899029000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.educlarify differences in MPAS log file messages 2023-04-07 14:23:49 -06007d2db5bb399fbd73c263822156e3614527e722d7clarify differences in MPAS log file messageseditsrc/dynamics/mpas/dycore_budget.F90src/chemistry/aerosol/aerosol_properties_mod.F90src/chemistry/aerosol/modal_aerosol_properties_mod.F90src/chemistry/aerosol/aerosol_state_mod.F90c5fc2825f7f29b5acda6bce210c0677c8a91873f1680942321000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edudeferred soluble modified: src/chemistry/aerosol/aerosol_properties_mod.F90 modified: src/chemistry/aerosol/aerosol_state_mod.F90 modified: src/chemistry/aerosol/modal_aerosol_properties_mod.F90 2023-04-08 02:25:21 -0600c5fc2825f7f29b5acda6bce210c0677c8a91873fdeferred solubleeditsrc/chemistry/aerosol/aerosol_properties_mod.F90editsrc/chemistry/aerosol/aerosol_state_mod.F90editsrc/chemistry/aerosol/modal_aerosol_properties_mod.F90bld/namelist_files/namelist_definition.xmlsrc/dynamics/mpas/dp_coupling.F90src/utils/cam_grid_support.F90doc/ChangeLogsrc/control/budgets.F90e39ca76851ea5d881308be13cab4bf091082d0dc1681106370000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduupdate ChangeLog for PR, bug fix for MPAS, added thermo_budget_debug to put out all budget variables 2023-04-09 23:59:30 -0600e39ca76851ea5d881308be13cab4bf091082d0dcupdate ChangeLog for PR, bug fix for MPAS, added thermo_budget_debug to put out all budget variableseditsrc/dynamics/mpas/dp_coupling.F90editdoc/ChangeLogeditsrc/control/budgets.F90editbld/namelist_files/namelist_definition.xmleditsrc/utils/cam_grid_support.F90src/physics/cam/check_energy.F90623058ec6ef2c48674924ba7b0d6f9504ba4b2e91681160729000http://carson.math.uwm.edu/jenkins/user/peter.hjort.lauritzenpeter.hjort.lauritzenpeter.hjort.lauritzen@gmail.comfix failing sub-column test 2023-04-10 15:05:29 -0600623058ec6ef2c48674924ba7b0d6f9504ba4b2e9fix failing sub-column testeditsrc/physics/cam/check_energy.F90bld/namelist_files/namelist_defaults_cam.xmld1a8ff3e362e9f65c0b0773c58f821bb5a9325911681168721000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comnew namelist defaults for water_species - based primarily on microphysics and then physics package 2023-04-10 17:18:41 -0600d1a8ff3e362e9f65c0b0773c58f821bb5a932591new namelist defaults for water_species - based primarily on microphysics and then physics packageeditbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/phys_control.F90src/chemistry/mozart/hco_cc_emissions.F90bld/build-namelistsrc/physics/cam/physpkg.F90cime_config/config_component.xmlbld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/mozart/mo_setext.F90bld/configuresrc/chemistry/mozart/chemistry.F90Externals_CAM.cfg80314c83e7833d10e8d9cc3a9e4537c1bc7c59b81681185787000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdates to address review comments. - Remove -hemco compile-time configure option. - Update config_component.xml to update use_hemco namelist option based on compset %HEMCO match. - Initialization and performance fixes in hco_cc_emissions.F90. - Use use_hemco from phys_control directly instead of using get_physopts. - Update HEMCO-CESM upstream to hemco-cesm1_1_3_hemco3_6_2. 2023-04-11 00:03:07 -040080314c83e7833d10e8d9cc3a9e4537c1bc7c59b8Updates to address review comments.editbld/namelist_files/namelist_defaults_cam.xmleditsrc/physics/cam/physpkg.F90editExternals_CAM.cfgeditsrc/chemistry/mozart/hco_cc_emissions.F90editbld/configureeditcime_config/config_component.xmleditsrc/chemistry/mozart/chemistry.F90editsrc/chemistry/mozart/mo_setext.F90editsrc/physics/cam/phys_control.F90editbld/build-namelistsrc/physics/cam/microp_aero.F90482d52a8bae8334f49e7d39c8379d070c636e6fa1681231665000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix for prescribed bulk aerosols in cam6 phys modified: src/physics/cam/microp_aero.F90 2023-04-11 10:47:45 -0600482d52a8bae8334f49e7d39c8379d070c636e6fafix for prescribed bulk aerosols in cam6 physeditsrc/physics/cam/microp_aero.F90bld/namelist_files/namelist_definition.xmlc56a5cab21746b5f0f29a53dca654a5d34d126881681247220000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comallow budgets to be written to files 0-10 2023-04-11 15:07:00 -0600c56a5cab21746b5f0f29a53dca654a5d34d12688allow budgets to be written to files 0-10editbld/namelist_files/namelist_definition.xmlsrc/physics/cam/physpkg.F90Externals_CAM.cfga517cc884e7f27aee71237535d5aa2f5af2a1e6d1681351876000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comRemove HEMCO phase 1 as currently unneeded 2023-04-12 22:11:16 -0400a517cc884e7f27aee71237535d5aa2f5af2a1e6dRemove HEMCO phase 1 as currently unneedededitExternals_CAM.cfgeditsrc/physics/cam/physpkg.F90src/utils/zonal_mean_mod.F90b047e96899773e807f290667a9aea387d8a2f8421681408228000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edureimplement Invert_Matrix using LAPACK DGESV 2023-04-13 13:50:28 -0400b047e96899773e807f290667a9aea387d8a2f842reimplement Invert_Matrix using LAPACK DGESVeditsrc/utils/zonal_mean_mod.F90doc/ChangeLogsrc/control/cam_history.F90cime_config/config_compsets.xmldfc957a9ca6664b3635f7a7a818968228a681bba1681775048000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.educhanges for misc PR 2023-04-17 19:44:08 -0400dfc957a9ca6664b3635f7a7a818968228a681bbachanges for misc PReditdoc/ChangeLogeditcime_config/config_compsets.xmleditsrc/control/cam_history.F90src/control/budgets.F90bld/namelist_files/namelist_definition.xmlbld/namelist_files/namelist_defaults_cam.xmld1c2a8ef7fcef36f0aa7fd0b324c8e0a3c4871c11681775669000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR review updates for Jesse 2023-04-17 17:54:29 -0600d1c2a8ef7fcef36f0aa7fd0b324c8e0a3c4871c1PR review updates for Jesseeditbld/namelist_files/namelist_definition.xmleditsrc/control/budgets.F90editbld/namelist_files/namelist_defaults_cam.xmlsrc/control/budgets.F90e9c05293a1f11a375e27b08bbf259a2bf2edb7ed1681778101000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR updates for Jesse, continued ... 2023-04-17 18:35:01 -0600e9c05293a1f11a375e27b08bbf259a2bf2edb7edPR updates for Jesse, continued ...editsrc/control/budgets.F90doc/ChangeLogd0f1303ff0c3cbbcda36870870eb486d98aa4da61681829754000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate ChangeLog 2023-04-18 10:55:54 -0400d0f1303ff0c3cbbcda36870870eb486d98aa4da6update ChangeLogeditdoc/ChangeLogExternals.cfgsrc/control/cam_history.F90src/control/budgets.F90src/cpl/nuopc/atm_stream_ndep.F90bld/namelist_files/namelist_definition.xmlsrc/control/cam_history_support.F90doc/ChangeLog51af377391f8e528198f74b5c59fb86fbbf874cf1681921862000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR comment updates 2023-04-19 10:31:02 -060051af377391f8e528198f74b5c59fb86fbbf874cfPR comment updateseditsrc/control/budgets.F90editsrc/cpl/nuopc/atm_stream_ndep.F90editExternals.cfgeditdoc/ChangeLogeditbld/namelist_files/namelist_definition.xmleditsrc/control/cam_history.F90editsrc/control/cam_history_support.F90src/control/cam_history.F90src/dynamics/fv/dycore_budget.F90src/dynamics/fv3/dycore_budget.F90src/dynamics/mpas/dp_coupling.F90src/control/budgets.F90src/dynamics/mpas/dycore_budget.F90src/dynamics/eul/dycore_budget.F90src/dynamics/se/dycore_budget.F90b2f90247ae8666223c775b9466719625665d97a31681939606000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comnext tranche of updates for the PR 2023-04-19 15:26:46 -0600b2f90247ae8666223c775b9466719625665d97a3next tranche of updates for the PReditsrc/dynamics/fv/dycore_budget.F90editsrc/dynamics/fv3/dycore_budget.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/control/budgets.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/eul/dycore_budget.F90editsrc/control/cam_history.F90editsrc/dynamics/se/dycore_budget.F90src/dynamics/mpas/dycore_budget.F90src/dynamics/fv/metdata.F90src/dynamics/mpas/dp_coupling.F90a7ff2ed99e1b72f700169ca48c6ffcab46390bd61682020778000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edurepond to PR comments 2023-04-20 13:59:38 -0600a7ff2ed99e1b72f700169ca48c6ffcab46390bd6repond to PR commentseditsrc/dynamics/fv/metdata.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/mpas/dp_coupling.F90src/dynamics/mpas/dycore_budget.F9030d45f576ff0bbe30ac5f8e4dfa50df41cd885e21682029728000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduPR comments mods 2023-04-20 16:28:48 -060030d45f576ff0bbe30ac5f8e4dfa50df41cd885e2PR comments modseditsrc/dynamics/mpas/dycore_budget.F90src/dynamics/mpas/dycore_budget.F900208c49e4a7abe0d1d343467766363f5ffb0cbbb1682030880000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edumore mods 2023-04-20 16:48:00 -06000208c49e4a7abe0d1d343467766363f5ffb0cbbbmore modseditsrc/dynamics/mpas/dycore_budget.F90src/control/cam_history.F90src/dynamics/fv/dycore_budget.F90src/dynamics/fv3/dycore_budget.F90src/utils/cam_thermo.F90src/control/budgets.F90src/dynamics/se/dycore/global_norms_mod.F90src/dynamics/mpas/dycore_budget.F90src/physics/cam/check_energy.F90src/utils/cam_grid_support.F90src/dynamics/eul/dycore_budget.F90src/physics/simple/physpkg.F90src/dynamics/se/dycore_budget.F900a6f9cfc2f75fc3c95c010da9f34b6bd6d1498a81682035550000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR budget mods no answer changing 2023-04-20 18:05:50 -06000a6f9cfc2f75fc3c95c010da9f34b6bd6d1498a8PR budget mods no answer changingeditsrc/physics/cam/check_energy.F90editsrc/dynamics/se/dycore/global_norms_mod.F90editsrc/dynamics/eul/dycore_budget.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/physics/simple/physpkg.F90editsrc/utils/cam_grid_support.F90editsrc/dynamics/fv/dycore_budget.F90editsrc/dynamics/se/dycore_budget.F90editsrc/utils/cam_thermo.F90editsrc/control/cam_history.F90editsrc/dynamics/fv3/dycore_budget.F90editsrc/control/budgets.F90src/dynamics/se/dycore/global_norms_mod.F90src/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/se/dycore_budget.F909456829ac1ce00894a65ed1d487054730339044a1682097845000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduPR responses 2023-04-21 11:24:05 -06009456829ac1ce00894a65ed1d487054730339044aPR responseseditsrc/dynamics/se/dycore/global_norms_mod.F90editsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/se/dycore_budget.F90c9a5f54a4ee1b124e6642eeeb7dd1fb92146ce1d1682098209000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduPR mods. 2023-04-21 11:30:09 -0600c9a5f54a4ee1b124e6642eeeb7dd1fb92146ce1dPR mods.editsrc/dynamics/se/dycore_budget.F90src/chemistry/mozart/ocean_emis.F904e7d6851ea27f0d4d0fb03599b50cd319e11be2b1682106704000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduloop over columns rather than use where block; specify intent for arguments modified: src/chemistry/mozart/ocean_emis.F90 2023-04-21 13:51:44 -06004e7d6851ea27f0d4d0fb03599b50cd319e11be2bloop over columns rather than use where block; specify intent for argumentseditsrc/chemistry/mozart/ocean_emis.F90src/dynamics/se/dycore/dimensions_mod.F90src/dynamics/se/dycore/global_norms_mod.F90src/dynamics/se/dyn_grid.F90src/dynamics/se/advect_tend.F90src/dynamics/se/dycore_budget.F90src/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/se/dycore/namelist_mod.F90src/dynamics/se/dycore/hybrid_mod.F90src/dynamics/se/dycore/viscosity_mod.F90src/dynamics/se/dycore/prim_state_mod.F90src/dynamics/se/dycore/fvm_mod.F90src/dynamics/se/test_fvm_mapping.F90src/dynamics/se/dycore/prim_driver_mod.F90src/dynamics/se/dyn_comp.F90src/dynamics/se/restart_dynamics.F907ad2d0951a9ea48fd184c8e37c9ba977c5ff1cdf1682108622000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edureplace ntrac>0 with use_cslam throughout code; other clean-up 2023-04-21 14:23:42 -06007ad2d0951a9ea48fd184c8e37c9ba977c5ff1cdfreplace ntrac>0 with use_cslam throughout code; other clean-upeditsrc/dynamics/se/dycore/hybrid_mod.F90editsrc/dynamics/se/dycore/fvm_mod.F90editsrc/dynamics/se/advect_tend.F90editsrc/dynamics/se/dycore/dimensions_mod.F90editsrc/dynamics/se/dycore/prim_state_mod.F90editsrc/dynamics/se/dycore/namelist_mod.F90editsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/se/dycore/global_norms_mod.F90editsrc/dynamics/se/dycore/prim_driver_mod.F90editsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/se/test_fvm_mapping.F90editsrc/dynamics/se/dyn_grid.F90editsrc/dynamics/se/dycore/viscosity_mod.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/dynamics/se/restart_dynamics.F90src/control/budgets.F90src/dynamics/mpas/dyn_comp.F90src/dynamics/se/dp_coupling.F90627d3802e6e55ca77418abb8f0ea51660168e5b61682109237000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR updates 2023-04-21 14:33:57 -0600627d3802e6e55ca77418abb8f0ea51660168e5b6PR updateseditsrc/control/budgets.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/dynamics/se/dp_coupling.F90src/control/budgets.F9010f5d9e523125b918bb0e0ac6948e099687d07c01682109417000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR update check budget_num 2023-04-21 14:36:57 -060010f5d9e523125b918bb0e0ac6948e099687d07c0PR update check budget_numeditsrc/control/budgets.F90src/utils/cam_thermo.F90src/dynamics/se/dycore/prim_driver_mod.F90src/dynamics/se/dycore/prim_advance_mod.F90src/physics/cam/check_energy.F90f475865d66049d8aca0af5925233a48a43fe05281682109932000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edureplace /gravit with rga throughout code 2023-04-21 14:45:32 -0600f475865d66049d8aca0af5925233a48a43fe0528replace /gravit with rga throughout codeeditsrc/utils/cam_thermo.F90editsrc/physics/cam/check_energy.F90editsrc/dynamics/se/dycore/prim_driver_mod.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90src/physics/cam/geopotential.F90src/utils/cam_thermo.F90src/physics/cam/phys_control.F901a77db4958df5f6b16068bb450b559327eaba8531682113455000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.edubug in previous commit - round-off answer changes! 2023-04-21 15:44:15 -06001a77db4958df5f6b16068bb450b559327eaba853bug in previous commit - round-off answer changes!editsrc/physics/cam/geopotential.F90editsrc/utils/cam_thermo.F90editsrc/physics/cam/phys_control.F90src/utils/cam_thermo.F90src/dynamics/se/dyn_comp.F90src/dynamics/mpas/dycore_budget.F90src/utils/air_composition.F90src/dynamics/se/dycore_budget.F90src/dynamics/mpas/dyn_comp.F90src/dynamics/fv/metdata.F9096fc4c1372a1b2c442e43bdf28c683e86bf40aac1682113523000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comsplit long lines for PR 2023-04-21 15:45:23 -060096fc4c1372a1b2c442e43bdf28c683e86bf40aacsplit long lines for PReditsrc/dynamics/fv/metdata.F90editsrc/dynamics/mpas/dycore_budget.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/utils/air_composition.F90editsrc/dynamics/se/dycore_budget.F90editsrc/utils/cam_thermo.F90editsrc/dynamics/se/dyn_comp.F90src/control/budgets.F90bld/namelist_files/namelist_definition.xmld457221664eebc8fdf3bdab66b039d5d7d43ece51682117231000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR fix for valid tapes numbers 2023-04-21 16:47:11 -0600d457221664eebc8fdf3bdab66b039d5d7d43ece5PR fix for valid tapes numberseditbld/namelist_files/namelist_definition.xmleditsrc/control/budgets.F90src/utils/cam_thermo.F90d6151af7c74d38928c915e1f0b1815f282e49ad61682350528000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate src/utils/cam_thermo.F90 Co-authored-by: Jesse Nusbaumer <nusbaume@ucar.edu> 2023-04-24 09:35:28 -0600d6151af7c74d38928c915e1f0b1815f282e49ad6Update src/utils/cam_thermo.F90editsrc/utils/cam_thermo.F90Externals.cfgf236f1d62517f725332db5eb88a6a612d7ff01bd1682351956000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse ESCOMP/CMEPS tag modified: Externals.cfg 2023-04-24 09:59:16 -0600f236f1d62517f725332db5eb88a6a612d7ff01bduse ESCOMP/CMEPS tageditExternals.cfgsrc/utils/air_composition.F904e6d0644c98f25109e603d8fb7768bee4f79e8471682352342000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduPR 2023-04-24 10:05:42 -06004e6d0644c98f25109e603d8fb7768bee4f79e847PReditsrc/utils/air_composition.F90src/control/camsrfexch.F90src/chemistry/mozart/mo_lightning.F90af5d2b61c8716343b6dcf96ce3f86adfe65102141682353727000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduJesse's change requests modified: src/chemistry/mozart/mo_lightning.F90 modified: src/control/camsrfexch.F90 2023-04-24 10:28:47 -0600af5d2b61c8716343b6dcf96ce3f86adfe6510214Jesse's change requestseditsrc/control/camsrfexch.F90editsrc/chemistry/mozart/mo_lightning.F90src/control/budgets.F90src/control/cam_history.F90d9f7645ecff3a41a89014d32a804180e0187c4c51682367669000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR commits 2023-04-24 14:21:09 -0600d9f7645ecff3a41a89014d32a804180e0187c4c5PR commitseditsrc/control/budgets.F90editsrc/control/cam_history.F90doc/ChangeLogbld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F90c86a15b27923c9a405eb724db8766dee9e9035611682374364000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edufixes for #741, #743 2023-04-24 18:12:44 -0400c86a15b27923c9a405eb724db8766dee9e903561fixes for #741, #743editdoc/ChangeLogeditsrc/physics/cam/clubb_intr.F90editbld/namelist_files/namelist_definition.xmlsrc/control/cam_history.F9014b0adfafd488f5dffa26306a45876fd611a13261682378009000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR update, op to optype in error msg 2023-04-24 17:13:29 -060014b0adfafd488f5dffa26306a45876fd611a1326PR update, op to optype in error msgeditsrc/control/cam_history.F90src/control/cam_history.F90bce1fbbe61d04b42c4ec88a9f3f7d0a5d74acf781682378613000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR updates 2023-04-24 17:23:33 -0600bce1fbbe61d04b42c4ec88a9f3f7d0a5d74acf78PR updateseditsrc/control/cam_history.F90doc/ChangeLogsrc/chemistry/mozart/ocean_emis.F901349457cbc6be779a52be57b33228554d298aa541682434029000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd comment on filling in missing values; start ChangeLog modified: doc/ChangeLog modified: src/chemistry/mozart/ocean_emis.F90 2023-04-25 08:47:09 -06001349457cbc6be779a52be57b33228554d298aa54add comment on filling in missing values; start ChangeLogeditsrc/chemistry/mozart/ocean_emis.F90editdoc/ChangeLogdoc/ChangeLog55f8e282c3c20474f50a8244d87d3bb90d7f5a4c1682440147000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2023-04-25 10:29:07 -060055f8e282c3c20474f50a8244d87d3bb90d7f5a4cupdate ChangeLogeditdoc/ChangeLogsrc/utils/cam_thermo.F90ebbd4ac19cfd6adfe3560cd7662f25592466bf191682452603000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduPR mods 2023-04-25 13:56:43 -0600ebbd4ac19cfd6adfe3560cd7662f25592466bf19PR modseditsrc/utils/cam_thermo.F90src/dynamics/se/dp_coupling.F90bf37e82581bd45500b1b083da860b893d8845d851682453309000http://carson.math.uwm.edu/jenkins/user/pelpelpel@ucar.eduPR stuff 2023-04-25 14:08:29 -0600bf37e82581bd45500b1b083da860b893d8845d85PR stuffeditsrc/dynamics/se/dp_coupling.F90src/control/cam_history.F90src/control/budgets.F90src/dynamics/se/dyn_comp.F90src/infrastructure/phys_grid.F90src/dynamics/se/dyn_grid.F90src/control/cam_history_support.F90src/dynamics/se/dycore_budget.F908606bf90eb02d2be28edfef6c093e72a0a08c5d41682462499000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comPR refactor - comments, rename, added parameters 2023-04-25 16:41:39 -06008606bf90eb02d2be28edfef6c093e72a0a08c5d4PR refactor - comments, rename, added parameterseditsrc/infrastructure/phys_grid.F90editsrc/control/cam_history_support.F90editsrc/control/budgets.F90editsrc/control/cam_history.F90editsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/se/dyn_grid.F90doc/ChangeLoga124a450c85b0d0d358d02e92c45238c0757f3191682510619000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-04-26 06:03:39 -0600a124a450c85b0d0d358d02e92c45238c0757f319ChangeLog updateeditdoc/ChangeLogtest/system/archive_baseline.shdoc/ChangeLogsrc/physics/cam/cam_diagnostics.F9017dde6e2ef48e9e1143c6353e1ccf229f803edfb1682531141000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.edufix #608, #749 2023-04-26 13:45:41 -040017dde6e2ef48e9e1143c6353e1ccf229f803edfbfix #608, #749editsrc/physics/cam/cam_diagnostics.F90edittest/system/archive_baseline.sheditdoc/ChangeLogsrc/control/runtime_opts.F90src/control/cam_history.F90src/dynamics/fv/dycore_budget.F90src/physics/cam_dev/physpkg.F90src/physics/cam/physpkg.F90src/dynamics/mpas/dycore_budget.F90src/control/cam_budget.F90src/physics/simple/physpkg.F90src/dynamics/se/dycore_budget.F90src/dynamics/se/dycore/prim_advance_mod.F90src/dynamics/fv3/dycore_budget.F90src/dynamics/mpas/dp_coupling.F90src/control/budgets.F90src/dynamics/se/dyn_comp.F90src/physics/cam/check_energy.F90src/physics/cam/cam_diagnostics.F90src/dynamics/eul/dycore_budget.F90src/dynamics/mpas/dyn_comp.F9089bd77035cb6e1468f6a85519d4f03415c7f9fc81682531951000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comrename file/module budgets to cam_budget along with external subroutines 2023-04-26 11:59:11 -060089bd77035cb6e1468f6a85519d4f03415c7f9fc8rename file/module budgets to cam_budget along with external subroutineseditsrc/physics/simple/physpkg.F90editsrc/dynamics/fv3/dycore_budget.F90editsrc/dynamics/mpas/dp_coupling.F90editsrc/control/runtime_opts.F90editsrc/physics/cam/check_energy.F90editsrc/dynamics/se/dycore_budget.F90editsrc/dynamics/se/dycore/prim_advance_mod.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/control/cam_history.F90editsrc/dynamics/mpas/dycore_budget.F90deletesrc/control/budgets.F90editsrc/physics/cam/cam_diagnostics.F90addsrc/control/cam_budget.F90editsrc/dynamics/eul/dycore_budget.F90editsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/fv/dycore_budget.F90editsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/physpkg.F90doc/ChangeLogcf6fc5cad78cd0a9ff68d71c7d3bea4a04b95ee61682553793000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadd some changed files that were missing 2023-04-26 18:03:13 -0600cf6fc5cad78cd0a9ff68d71c7d3bea4a04b95ee6add some changed files that were missingeditdoc/ChangeLogbld/build-namelist1bcba618af25a360722d7cb15b757dab2cedd82c1682586063000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduset lght_no_prd_factor namelist opt if chem has NO 2023-04-27 03:01:03 -06001bcba618af25a360722d7cb15b757dab2cedd82cset lght_no_prd_factor namelist opt if chem has NOeditbld/build-namelistdoc/ChangeLogb80391594e27cd9f1a9d4e15880e05a318aa04931682605656000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2023-04-27 08:27:36 -0600b80391594e27cd9f1a9d4e15880e05a318aa0493update ChangeLogeditdoc/ChangeLogdoc/ChangeLog7bb9d578a879061b6ef8af3625bff24cc70b6c691682608617000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2023-04-27 09:16:57 -06007bb9d578a879061b6ef8af3625bff24cc70b6c69ChangeLog updateseditdoc/ChangeLogdoc/ChangeLoga7f83e70234116ee9d265dcb7cdfaefd03e444221682608807000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2023-04-27 09:20:07 -0600a7f83e70234116ee9d265dcb7cdfaefd03e44422ChangeLog updateseditdoc/ChangeLogdoc/ChangeLog0be2736b916f2bdbd6d116a19d34319be9252dfe1682608977000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog updates 2023-04-27 09:22:57 -06000be2736b916f2bdbd6d116a19d34319be9252dfeChangeLog updateseditdoc/ChangeLogsrc/utils/air_composition.F9034b3b4810f4f9e43ea8557714951d9c43ab3ee5d1682615141000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadded vcoord_moist_pressure ifelse to water_update for FV core 2023-04-27 11:05:41 -060034b3b4810f4f9e43ea8557714951d9c43ab3ee5dadded vcoord_moist_pressure ifelse to water_update for FV coreeditsrc/utils/air_composition.F90src/control/cam_budget.F90src/physics/cam/cam_diagnostics.F90src/dynamics/se/dycore_budget.F90src/dynamics/se/dyn_comp.F90src/dynamics/mpas/dyn_comp.F90e4e149cb3cec91bd94fb2b063d302c8c05c170111682621685000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comrename is_budget to is_cam_budget and cam_budget_em_budget to cam_budget_em_register 2023-04-27 12:54:45 -0600e4e149cb3cec91bd94fb2b063d302c8c05c17011rename is_budget to is_cam_budget and cam_budget_em_budget to cam_budget_em_registereditsrc/control/cam_budget.F90editsrc/dynamics/se/dyn_comp.F90editsrc/dynamics/mpas/dyn_comp.F90editsrc/dynamics/se/dycore_budget.F90editsrc/physics/cam/cam_diagnostics.F90bld/namelist_files/use_cases/hist_cam_mt.xmlcime_config/config_compsets.xml4a60ca74da7c6ab677b33730d82367be9c7568461682624250000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate FLTHIST compset and finish implementing initial FMTHIST compset 2023-04-27 13:37:30 -06004a60ca74da7c6ab677b33730d82367be9c756846Update FLTHIST compset and finish implementing initial FMTHIST compseteditbld/namelist_files/use_cases/hist_cam_mt.xmleditcime_config/config_compsets.xmlsrc/control/cam_budget.F90src/dynamics/se/dyn_comp.F903d1fe8ecdf3676a743fff581b85919cf083b2ce71682636196000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comremove extra cslam argument for snapshot and budget register 2023-04-27 16:56:36 -06003d1fe8ecdf3676a743fff581b85919cf083b2ce7remove extra cslam argument for snapshot and budget registereditsrc/control/cam_budget.F90editsrc/dynamics/se/dyn_comp.F90src/control/runtime_opts.F90Externals.cfgsrc/physics/cam_dev/physpkg.F90bld/build-namelistsrc/physics/cam/physpkg.F90src/chemistry/mozart/mo_lightning.F90src/control/camsrfexch.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/ocean_emis.F90doc/ChangeLogsrc/cpl/nuopc/atm_import_export.F90src/chemistry/mozart/mo_chemini.F90bld/namelist_files/namelist_definition.xmlb51b6325fc49f03d2ff66569f1b66ea48282fcb21682641837000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comreset --soft HEAD^ to remove last commit in error 2023-04-27 18:30:37 -0600b51b6325fc49f03d2ff66569f1b66ea48282fcb2reset --soft HEAD^ to remove last commit in erroreditsrc/physics/cam/physpkg.F90editbld/build-namelisteditsrc/chemistry/mozart/chemistry.F90editdoc/ChangeLogeditsrc/control/runtime_opts.F90editsrc/chemistry/mozart/mo_chemini.F90editbld/namelist_files/namelist_definition.xmleditsrc/chemistry/mozart/mo_lightning.F90editsrc/physics/cam_dev/physpkg.F90editsrc/chemistry/mozart/ocean_emis.F90editsrc/control/camsrfexch.F90editsrc/cpl/nuopc/atm_import_export.F90editExternals.cfgExternals.cfgsrc/control/runtime_opts.F90src/physics/cam_dev/physpkg.F90bld/build-namelistsrc/physics/cam/physpkg.F90src/chemistry/mozart/mo_lightning.F90src/control/camsrfexch.F90src/chemistry/mozart/ocean_emis.F90src/chemistry/mozart/chemistry.F90doc/ChangeLogsrc/cpl/nuopc/atm_import_export.F90src/chemistry/mozart/mo_chemini.F90bld/namelist_files/namelist_definition.xmla78865e7b06bb2ccbecda4d0bf5edcc1fb9b03701682646339000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comreverting to 3253718 2023-04-27 19:45:39 -0600a78865e7b06bb2ccbecda4d0bf5edcc1fb9b0370reverting to 3253718editdoc/ChangeLogeditExternals.cfgeditsrc/physics/cam/physpkg.F90editsrc/cpl/nuopc/atm_import_export.F90editsrc/physics/cam_dev/physpkg.F90editbld/build-namelisteditsrc/chemistry/mozart/mo_lightning.F90editbld/namelist_files/namelist_definition.xmleditsrc/chemistry/mozart/ocean_emis.F90editsrc/chemistry/mozart/mo_chemini.F90editsrc/control/runtime_opts.F90editsrc/chemistry/mozart/chemistry.F90editsrc/control/camsrfexch.F90src/physics/cam/physpkg.F90176b0884e4656e3ad6d8d9a0a44d11fdc6c3aa451682663694000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comforgot to rename cam_budget_init in cam/physpkg 2023-04-28 00:34:54 -0600176b0884e4656e3ad6d8d9a0a44d11fdc6c3aa45forgot to rename cam_budget_init in cam/physpkgeditsrc/physics/cam/physpkg.F90src/control/cam_history.F90e846d0fc6fe8ef5ed23f605b2ff12e53561643e41682696649000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduFINDLOC not supported in NAG versions < 7.0 replaced with MAXLOC 2023-04-28 09:44:09 -0600e846d0fc6fe8ef5ed23f605b2ff12e53561643e4FINDLOC not supported in NAG versions < 7.0 replaced with MAXLOCeditsrc/control/cam_history.F90src/control/cam_history.F90abd0cf5f7dcc10a5cc7ca6e6832bbf54b38d52a41682710023000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.combugfix for MAXLOC doesnt affect regression tests as no globals tested yet 2023-04-28 13:27:03 -0600abd0cf5f7dcc10a5cc7ca6e6832bbf54b38d52a4bugfix for MAXLOC doesnt affect regression tests as no globals tested yeteditsrc/control/cam_history.F90src/dynamics/mpas/dycore_budget.F90f4742d8fa9729cce343b196ffad1535da8e45ad41682712915000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comcorrected subroutine renames - only executed when budgets are turned on - no regression test side effects. 2023-04-28 14:15:15 -0600f4742d8fa9729cce343b196ffad1535da8e45ad4corrected subroutine renames - only executed when budgets are turned on - no regression test side effects.editsrc/dynamics/mpas/dycore_budget.F90doc/ChangeLog65d277fd05f9f710e68063617f2a5899a843414b1682718975000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comupdate Changelog for tag 2023-04-28 15:56:15 -060065d277fd05f9f710e68063617f2a5899a843414bupdate Changelog for tageditdoc/ChangeLogdoc/ChangeLoga054f198af2fdd274a9bfae481ac23ffd3e7907f1682719847000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadd extra issues also included in this PR 2023-04-28 16:10:47 -0600a054f198af2fdd274a9bfae481ac23ffd3e7907fadd extra issues also included in this PReditdoc/ChangeLogdoc/ChangeLogda6f9aed13099de3c3fcd104429a0672a1e4066b1682720040000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comspelling... 2023-04-28 16:14:00 -0600da6f9aed13099de3c3fcd104429a0672a1e4066bspelling...editdoc/ChangeLogdoc/ChangeLog4043cb899f1857ebc0bbd1c6b8870346940849b61682720292000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadded issue #789 2023-04-28 16:18:12 -06004043cb899f1857ebc0bbd1c6b8870346940849b6added issue #789editdoc/ChangeLogsrc/physics/cam/hetfrz_classnuc_cam.F90cf07f6725a7e5388033ff57bd59f5ab645d758751682952229000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove optional key words modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-05-01 08:43:49 -0600cf07f6725a7e5388033ff57bd59f5ab645d75875remove optional key wordseditsrc/physics/cam/hetfrz_classnuc_cam.F90doc/ChangeLogf2e4e5063886caff6f001e38ab4bb81af9907ad51683118310000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdate ChangeLog 2023-05-03 06:51:50 -0600f2e4e5063886caff6f001e38ab4bb81af9907ad5Update ChangeLogeditdoc/ChangeLogdoc/ChangeLog0ca20762bea4f828c56fb06f162e5b37a7d6f6a91683301107000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate to ChangeLog 2023-05-05 11:38:27 -04000ca20762bea4f828c56fb06f162e5b37a7d6f6a9update to ChangeLogeditdoc/ChangeLogdoc/ChangeLogsrc/control/cam_history.F90cime_config/config_compsets.xml2a98f173cc243a9c2fe7f36219db63a1a7a6b56a1683649331000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate compsets; back out cam_history change 2023-05-09 12:22:11 -04002a98f173cc243a9c2fe7f36219db63a1a7a6b56aupdate compsets; back out cam_history changeeditdoc/ChangeLogeditcime_config/config_compsets.xmleditsrc/control/cam_history.F90doc/ChangeLogf8cb4dd58a3b590a81df674e92a7a929652f7d1d1683654541000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduupdate ChangeLog 2023-05-09 13:49:01 -0400f8cb4dd58a3b590a81df674e92a7a929652f7d1dupdate ChangeLogeditdoc/ChangeLogcime_config/config_compsets.xml22f2dd54c59985e0185ae6a9b1d1102b8b2108a21683659595000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comRemove unnecessary USE_ESMF_LIB override for HEMCO, as USE_ESMF_LIB is always enabled now 2023-05-09 15:13:15 -040022f2dd54c59985e0185ae6a9b1d1102b8b2108a2Remove unnecessary USE_ESMF_LIB override for HEMCO, as USE_ESMF_LIB is always enabled noweditcime_config/config_compsets.xmlsrc/physics/cam_dev/physpkg.F90src/chemistry/pp_terminator/chemistry.F90src/physics/cam/physpkg.F90src/chemistry/pp_none/chemistry.F90700811bfb3117a6cc7de10fba1963b2bb65da0521683660103000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comAdd HEMCO to cam_dev; fix pp_none and pp_terminator new chem_emissions module arguments 2023-05-09 15:21:43 -0400700811bfb3117a6cc7de10fba1963b2bb65da052Add HEMCO to cam_dev; fix pp_none and pp_terminator new chem_emissions module argumentseditsrc/chemistry/pp_terminator/chemistry.F90editsrc/chemistry/pp_none/chemistry.F90editsrc/physics/cam/physpkg.F90editsrc/physics/cam_dev/physpkg.F90bld/namelist_files/use_cases/dctest_frierson.xml6240bde6622a930f3254a1cb13818f7801c51c711683759908000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduRemove daily output and add spun up 2 deg FV ncdata file 2023-05-10 17:05:08 -06006240bde6622a930f3254a1cb13818f7801c51c71Remove daily output and add spun up 2 deg FV ncdata fileeditbld/namelist_files/use_cases/dctest_frierson.xmlbld/namelist_files/namelist_defaults_cam.xml9d03b5b8e07bbf4334c3796561f132ee11a05d841683766444000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.cominitial add of mpas boundary data for new resolutions 2023-05-10 18:54:04 -06009d03b5b8e07bbf4334c3796561f132ee11a05d84initial add of mpas boundary data for new resolutionseditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/use_cases/1850_cam_mt.xmlcime_config/config_component.xmlbld/namelist_files/use_cases/1850_cam_lt.xmlfbfff4b954e736cd1237955b305986fabd8289f11683823743000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd 1850 MT and LT use_cases 2023-05-11 10:49:03 -0600fbfff4b954e736cd1237955b305986fabd8289f1Add 1850 MT and LT use_casesaddbld/namelist_files/use_cases/1850_cam_mt.xmleditcime_config/config_component.xmladdbld/namelist_files/use_cases/1850_cam_lt.xmlbld/namelist_files/use_cases/1850_cam_lt.xmlf92e5023d49ddc7d60f864fcc345f8e40dbc2c961683842705000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduCorrect typos - Cecile's initial run 2023-05-11 16:05:05 -0600f92e5023d49ddc7d60f864fcc345f8e40dbc2c96Correct typos - Cecile's initial runeditbld/namelist_files/use_cases/1850_cam_lt.xmlbld/namelist_files/use_cases/1850_cam_lt.xmlbld/namelist_files/use_cases/1850_cam_mt.xml00144d070e31746a988695e0ff812248e105ce2d1683843843000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix typos in MT and update comments 2023-05-11 16:24:03 -060000144d070e31746a988695e0ff812248e105ce2dFix typos in MT and update commentseditbld/namelist_files/use_cases/1850_cam_lt.xmleditbld/namelist_files/use_cases/1850_cam_mt.xmlExternals.cfg2e141d18b7e77ab1895c92de39b5d43ae012b4a51683901560000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comupdate ctsm and ccs_config externals 2023-05-12 08:26:00 -06002e141d18b7e77ab1895c92de39b5d43ae012b4a5update ctsm and ccs_config externalseditExternals.cfgExternals.cfgcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/shell_commandstest/system/test_driver.shcime_config/testdefs/testmods_dirs/cam/outfrq3s_carma/user_nl_cplcime_config/testdefs/testmods_dirs/cam/outfrq9s_multi/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq3s_carma/user_nl_clmcime_config/testdefs/testmods_dirs/cam/idphys/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq9s_multi/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq3s_carma/shell_commandsbld/namelist_files/use_cases/aquaplanet_waccm_ma_2000_cam6.xmlcime_config/testdefs/testmods_dirs/cam/idphys/user_nl_cplsrc/dynamics/fv/stepon.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_wetdep/user_nl_cplcime_config/testdefs/testmods_dirs/cam/outfrq9s_576tsks/user_nl_cplcime_config/SystemTests/tmc.pycime_config/testdefs/testmods_dirs/cam/outfrq3s_carma/user_nl_camcime_config/testdefs/testmods_dirs/cam/idphys/shell_commandscime_config/testdefs/testmods_dirs/cam/idphys/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq9s_multi/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq3d/user_nl_cpl385d04bc259e031124dccb58d9049f25608154a31683920461000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduFixing up merge issues and missed changes 2023-05-12 13:41:01 -0600385d04bc259e031124dccb58d9049f25608154a3Fixing up merge issues and missed changeseditcime_config/SystemTests/tmc.pydeletecime_config/testdefs/testmods_dirs/cam/idphys/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_multi/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_camedittest/system/test_driver.sheditsrc/dynamics/fv/stepon.F90deletecime_config/testdefs/testmods_dirs/cam/outfrq9s_576tsks/user_nl_cpleditcime_config/testdefs/testmods_dirs/cam/outfrq9s_camchem_mam4/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/idphys/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq3s_carma/user_nl_cpldeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_multi/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/outfrq3s_carma/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/idphys/user_nl_cpldeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_multi/user_nl_clmdeletebld/namelist_files/use_cases/aquaplanet_waccm_ma_2000_cam6.xmldeletecime_config/testdefs/testmods_dirs/cam/idphys/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/outfrq3s_carma/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_wetdep/user_nl_cpldeletecime_config/testdefs/testmods_dirs/cam/outfrq3s_carma/shell_commandseditExternals.cfgdeletecime_config/testdefs/testmods_dirs/cam/outfrq9s_mg3_casper/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/outfrq3d/user_nl_cplbld/namelist_files/use_cases/1850_cam_mt.xmlbld/namelist_files/use_cases/hist_cam_mt.xmlbld/namelist_files/use_cases/1850_cam_lt.xmlbld/namelist_files/use_cases/hist_cam_lt.xml174294a6298602ac7c8314a482fd30e4bb1469fb1683925194000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ext_frc_specifier in all LT and MT use_cases 2023-05-12 14:59:54 -0600174294a6298602ac7c8314a482fd30e4bb1469fbUpdate ext_frc_specifier in all LT and MT use_caseseditbld/namelist_files/use_cases/1850_cam_lt.xmleditbld/namelist_files/use_cases/hist_cam_lt.xmleditbld/namelist_files/use_cases/1850_cam_mt.xmleditbld/namelist_files/use_cases/hist_cam_mt.xmlbld/namelist_files/use_cases/1850_cam_mt.xmlbld/namelist_files/use_cases/1850_cam_lt.xml8172c51d9e178e80e747ff1b53648b4f7bf9e69e1683930062000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.edu Updated tracer_cnst_specifier 2023-05-12 16:21:02 -06008172c51d9e178e80e747ff1b53648b4f7bf9e69eUpdated tracer_cnst_specifiereditbld/namelist_files/use_cases/1850_cam_mt.xmleditbld/namelist_files/use_cases/1850_cam_lt.xmlbld/namelist_files/use_cases/1850_cam_lt.xmld8b2566f67b988a82bb533a1970f73ba9bfb2a221683936079000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUse updated ubc file in correct netCDF format 2023-05-12 18:01:19 -0600d8b2566f67b988a82bb533a1970f73ba9bfb2a22Use updated ubc file in correct netCDF formateditbld/namelist_files/use_cases/1850_cam_lt.xmlsrc/physics/cam/physpkg.F90src/physics/cam_dev/physpkg.F90src/chemistry/mozart/hco_cc_emissions.F90fee28f461b95dfe05fbe645f220a3c10e493272a1684116207000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comChanges to address reviewer comments 2023-05-14 22:03:27 -0400fee28f461b95dfe05fbe645f220a3c10e493272aChanges to address reviewer commentseditsrc/chemistry/mozart/hco_cc_emissions.F90editsrc/physics/cam_dev/physpkg.F90editsrc/physics/cam/physpkg.F90src/physics/cam/hetfrz_classnuc.F901e41d0315473647e5d6645dc5e1f3bc5e9bfd3e31684162619000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore info on references modified: src/physics/cam/hetfrz_classnuc_cam.F90 2023-05-15 08:56:59 -06001e41d0315473647e5d6645dc5e1f3bc5e9bfd3e3more info on referenceseditsrc/physics/cam/hetfrz_classnuc.F90bld/build-namelistbld/namelist_files/use_cases/1850_cam_lt.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/use_cases/hist_cam_lt.xmlbld/namelist_files/use_cases/1850_cam_mt.xmlbld/namelist_files/use_cases/hist_cam_mt.xmlcime_config/config_compsets.xml006719876ffc0f54b8541c7663924a7f3ab30f481684254290000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educhanges for default namelist settings; add FMT1850 and FLT1850 compsets for testing modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/use_cases/1850_cam_lt.xml modified: bld/namelist_files/use_cases/1850_cam_mt.xml modified: bld/namelist_files/use_cases/hist_cam_lt.xml modified: bld/namelist_files/use_cases/hist_cam_mt.xml modified: cime_config/config_compsets.xml 2023-05-16 10:24:50 -0600006719876ffc0f54b8541c7663924a7f3ab30f48changes for default namelist settings; add FMT1850 and FLT1850 compsets for testingeditbld/namelist_files/use_cases/1850_cam_lt.xmleditcime_config/config_compsets.xmleditbld/build-namelisteditbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/use_cases/hist_cam_lt.xmleditbld/namelist_files/use_cases/1850_cam_mt.xmleditbld/namelist_files/use_cases/hist_cam_mt.xmldoc/ChangeLog74c14fd9c14711c7256d9ed9e36a75d9cc1436141684281494000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduPreliminary ChangeLog 2023-05-16 17:58:14 -060074c14fd9c14711c7256d9ed9e36a75d9cc143614Preliminary ChangeLogeditdoc/ChangeLogcime_config/testdefs/testlist_cam.xmldad269e0d103084f1750213dd4c942a5b62ae3c41684297555000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comMove ne30 test case to prealpha 2023-05-17 00:25:55 -0400dad269e0d103084f1750213dd4c942a5b62ae3c4Move ne30 test case to prealphaeditcime_config/testdefs/testlist_cam.xmldoc/ChangeLogcime_config/config_compsets.xmlf42c6b014d74a7b13c30d39d547c2bd06d4d9d141684350630000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate compset name and final ChangeLog for cam6_3_111 2023-05-17 13:10:30 -0600f42c6b014d74a7b13c30d39d547c2bd06d4d9d14Update compset name and final ChangeLog for cam6_3_111editdoc/ChangeLogeditcime_config/config_compsets.xmldoc/ChangeLogdc86625bbf4525947dc74adf63e697c987316e901684350739000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduadd one more entry to ChangeLog 2023-05-17 13:12:19 -0600dc86625bbf4525947dc74adf63e697c987316e90add one more entry to ChangeLogeditdoc/ChangeLogdoc/ChangeLoge8f2440cecaae81e7b13f8f01a5fd84d99abfccf1684361898000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduinitial ChangeLog 2023-05-17 16:18:18 -0600e8f2440cecaae81e7b13f8f01a5fd84d99abfccfinitial ChangeLogeditdoc/ChangeLogdoc/ChangeLog5aa497aa7cfb46c3aa61e2a391e46e11a9a1614b1684378226000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-05-17 20:50:26 -06005aa497aa7cfb46c3aa61e2a391e46e11a9a1614bChangeLog updateeditdoc/ChangeLogdoc/ChangeLog942fbf4ddd6df7a6157688a1272a5472744cbc161684417226000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-05-18 07:40:26 -0600942fbf4ddd6df7a6157688a1272a5472744cbc16ChangeLog updateeditdoc/ChangeLogsrc/physics/simple/frierson_cam.F90862cb4278dca0ca035a402c3c5336c161f65069c1684448762000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress review comments 2023-05-18 16:26:02 -0600862cb4278dca0ca035a402c3c5336c161f65069cAddress review commentseditsrc/physics/simple/frierson_cam.F90src/chemistry/mozart/mo_gas_phase_chemdr.F90src/chemistry/mozart/chemistry.F90src/chemistry/mozart/hco_cc_emissions.F90e6d94b815473f86b1b24adec60b04f5e879250091684458065000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFix m index for extfrc; update to address reviewer comments 2023-05-18 21:01:05 -0400e6d94b815473f86b1b24adec60b04f5e87925009Fix m index for extfrc; update to address reviewer commentseditsrc/chemistry/mozart/mo_gas_phase_chemdr.F90editsrc/chemistry/mozart/hco_cc_emissions.F90editsrc/chemistry/mozart/chemistry.F90src/chemistry/mozart/hco_cc_emissions.F904d72a21bb65ce2eafda26445c6b2b2f0c33804e91684458192000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comRemove extraneous checks for pbuf field association as errors are reported by pbuf_get_field directly 2023-05-18 21:03:12 -04004d72a21bb65ce2eafda26445c6b2b2f0c33804e9Remove extraneous checks for pbuf field association as errors are reported by pbuf_get_field directlyeditsrc/chemistry/mozart/hco_cc_emissions.F90src/chemistry/mozart/hco_cc_emissions.F90f7070d17ba5af5fb3dfc310dba406506375554b61684505892000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comFix wrong species name source in initialization output 2023-05-19 10:18:12 -0400f7070d17ba5af5fb3dfc310dba406506375554b6Fix wrong species name source in initialization outputeditsrc/chemistry/mozart/hco_cc_emissions.F90bld/namelist_files/namelist_defaults_cam.xmlc665fca387e4c231231fc532ca53bb38ee1e2fb21684613899000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadded support for ne3pg3 for 32 level aquaplanets and F-cases 2023-05-20 14:18:19 -0600c665fca387e4c231231fc532ca53bb38ee1e2fb2added support for ne3pg3 for 32 level aquaplanets and F-caseseditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xml32082d465c0857ae0b9c480e858ae4095c8f979a1684620950000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadded support for ne5pg3 L32 F-cases 2023-05-20 16:15:50 -060032082d465c0857ae0b9c480e858ae4095c8f979aadded support for ne5pg3 L32 F-caseseditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlfe149a440794f155a4d8a2d02b61f72b91d574401684623759000http://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsteradamrhster@gmail.comadd support for ne16np3 L32 F-cases 2023-05-20 17:02:39 -0600fe149a440794f155a4d8a2d02b61f72b91d57440add support for ne16np3 L32 F-caseseditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xml41316a87b1e3b29fd4c902b9753e5ada98abf9001684780866000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadd mpas 15 240 topo boundary data 2023-05-22 12:41:06 -060041316a87b1e3b29fd4c902b9753e5ada98abf900add mpas 15 240 topo boundary dataeditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlc0b037dfc9d48ce0afe2b36bd3e52ec17a8143e01684880212000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comcp aherring files to standard directories 2023-05-23 16:16:52 -0600c0b037dfc9d48ce0afe2b36bd3e52ec17a8143e0cp aherring files to standard directorieseditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlebcf29cc7ba4f324ace16df0b5ba4f68b3aea8671684880749000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadd 58 level versions of SE initial files 2023-05-23 16:25:49 -0600ebcf29cc7ba4f324ace16df0b5ba4f68b3aea867add 58 level versions of SE initial fileseditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlcb3d427a32c9810f734a282d1b0ebe6d6f06068d1684898001000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUse relative path in inputdata for HEMCO config file. 2023-05-23 23:13:21 -0400cb3d427a32c9810f734a282d1b0ebe6d6f06068dUse relative path in inputdata for HEMCO config file.editbld/namelist_files/namelist_defaults_cam.xmlbld/build-namelist52f7cf136437ee40caa5cb29669e1c2390bc8ad11684898024000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.combuild-namelist changes from Brian Eaton <eaton@ucar.edu> for ext_frc_specifier/srf_emis_specifier to be incompatible with use_hemco = .true., other comment changes 2023-05-23 23:13:44 -040052f7cf136437ee40caa5cb29669e1c2390bc8ad1build-namelist changes from Brian Eaton <eaton@ucar.edu> for ext_frc_specifier/srf_emis_specifier to be incompatible with use_hemco = .true., other comment changeseditbld/build-namelistcime_config/config_pes.xmlbld/namelist_files/namelist_defaults_cam.xml105d1f38b39a270fc19070a0e248cbbba9e672041685042866000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduModify based on tuning 'f' and up PE count for MT compset 2023-05-25 13:27:46 -0600105d1f38b39a270fc19070a0e248cbbba9e67204Modify based on tuning 'f' and up PE count for MT compseteditcime_config/config_pes.xmleditbld/namelist_files/namelist_defaults_cam.xmlcime_config/config_pes.xml5e6e81953e626d8e20d3dd3197706a914f6570201685043640000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUp PE layout to 50 for MT compsets 2023-05-25 13:40:40 -06005e6e81953e626d8e20d3dd3197706a914f657020Up PE layout to 50 for MT compsetseditcime_config/config_pes.xmlsrc/physics/cam/physpkg.F90src/physics/cam_dev/physpkg.F9098ccda4dbd32c058832aa9cfbe698da01fc499831685163482000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comStyle fixes to address review comments 2023-05-27 00:58:02 -040098ccda4dbd32c058832aa9cfbe698da01fc49983Style fixes to address review commentseditsrc/physics/cam/physpkg.F90editsrc/physics/cam_dev/physpkg.F90Externals_CAM.cfge2f76f14d389177eb71f65bd8a729d73584dd97c1685645010000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate HEMCO-CESM upstream to hemco-cesm1_1_5_hemco3_6_2_cesm for NAG compiler fixes 2023-06-01 14:43:30 -0400e2f76f14d389177eb71f65bd8a729d73584dd97cUpdate HEMCO-CESM upstream to hemco-cesm1_1_5_hemco3_6_2_cesm for NAG compiler fixeseditExternals_CAM.cfgbld/namelist_files/namelist_defaults_cam.xml3309d7788e8a7246076e32906ad59150539d4a761685646211000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUse 0.5x0.625 grid internally in HEMCO for se_refined_mesh grids 2023-06-01 15:03:31 -04003309d7788e8a7246076e32906ad59150539d4a76Use 0.5x0.625 grid internally in HEMCO for se_refined_mesh gridseditbld/namelist_files/namelist_defaults_cam.xmlbld/configurebld/build-namelistcime_config/config_component.xmlcime_config/config_pes.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/config_files/definition.xmlee261a7d5d0d4aa04e08c6676787cf3abd8567221685648887000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd model_top configure flag 2023-06-01 13:48:07 -0600ee261a7d5d0d4aa04e08c6676787cf3abd856722Add model_top configure flageditcime_config/config_component.xmleditbld/namelist_files/namelist_defaults_cam.xmleditbld/configureeditbld/build-namelisteditcime_config/config_pes.xmleditbld/config_files/definition.xmldoc/ChangeLogae86c206f0367fe16c00f17babf1e2c91fa4077a1685652598000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comDraft ChangeLog 2023-06-01 16:49:58 -0400ae86c206f0367fe16c00f17babf1e2c91fa4077aDraft ChangeLogeditdoc/ChangeLogcime_config/testdefs/testlist_cam.xml8dad3400ac294fcae26a798d94283475997047d11685653406000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove MCT tests 2023-06-01 15:03:26 -06008dad3400ac294fcae26a798d94283475997047d1remove MCT testseditcime_config/testdefs/testlist_cam.xmlcime_config/config_pes.xmlfe4d06767b6d33ee4d3ceb80f634b5d122efb30d1685654368000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdjust PE layout for MT run to one which works with restarts 2023-06-01 15:19:28 -0600fe4d06767b6d33ee4d3ceb80f634b5d122efb30dAdjust PE layout for MT run to one which works with restartseditcime_config/config_pes.xmlcime_config/config_pes.xmlbld/config_files/definition.xmlbld/build-namelist431c40d2d1e4754b4df8816bef4b79f7af0f2ad51685724834000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress more review comments 2023-06-02 10:53:54 -0600431c40d2d1e4754b4df8816bef4b79f7af0f2ad5Address more review commentseditbld/config_files/definition.xmleditbld/build-namelisteditcime_config/config_pes.xmlmanage_externals/test/test_unit_externals_description.pymanage_externals/.gitignoremanage_externals/.travis.ymlmanage_externals/test/test_unit_repository_git.pymanage_externals/manic/sourcetree.pymanage_externals/test/test_sys_repository_git.pymanage_externals/manic/externals_status.pymanage_externals/test/test_unit_utils.pymanage_externals/manic/utils.pymanage_externals/test/repos/README.mdmanage_externals/test/test_unit_externals_status.pymanage_externals/manic/externals_description.pymanage_externals/manic/repository_factory.pymanage_externals/manic/checkout.pymanage_externals/manic/repository_svn.pymanage_externals/test/test_sys_checkout.pymanage_externals/checkout_externalsmanage_externals/test/README.mdmanage_externals/.github/workflows/tests.ymlmanage_externals/test/test_unit_repository.pymanage_externals/manic/repository_git.pymanage_externals/README.mdmanage_externals/.github/workflows/bumpversion.ymlmanage_externals/test/test_unit_repository_svn.py628e0d410ef194bde8891f5a2d9176f25a2700151685738595000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate manage_externals 2023-06-02 14:43:15 -0600628e0d410ef194bde8891f5a2d9176f25a270015Update manage_externalsaddmanage_externals/.github/workflows/tests.ymladdmanage_externals/.github/workflows/bumpversion.ymleditmanage_externals/test/test_unit_repository_git.pyeditmanage_externals/test/test_unit_repository.pyeditmanage_externals/manic/externals_status.pyeditmanage_externals/manic/repository_factory.pyeditmanage_externals/test/test_sys_checkout.pyeditmanage_externals/.gitignoreeditmanage_externals/manic/checkout.pyaddmanage_externals/test/repos/README.mdeditmanage_externals/test/test_unit_externals_description.pyeditmanage_externals/test/test_sys_repository_git.pyeditmanage_externals/manic/externals_description.pyeditmanage_externals/test/README.mdeditmanage_externals/test/test_unit_repository_svn.pyeditmanage_externals/.travis.ymleditmanage_externals/manic/repository_git.pyeditmanage_externals/manic/repository_svn.pyeditmanage_externals/test/test_unit_externals_status.pyeditmanage_externals/manic/utils.pyeditmanage_externals/README.mdeditmanage_externals/checkout_externalseditmanage_externals/manic/sourcetree.pyeditmanage_externals/test/test_unit_utils.pycime_config/testdefs/testmods_dirs/cam/scmarm/shell_commandscime_config/usermods_dirs/scam_mandatory/shell_commandsf5ecc7bc4b3dddd7007c0fa56e13f4024f9017c51686003106000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix nag scam test by removing mpi-serial setting modified: cime_config/testdefs/testmods_dirs/cam/scmarm/shell_commands modified: cime_config/usermods_dirs/scam_mandatory/shell_commands 2023-06-05 16:11:46 -0600f5ecc7bc4b3dddd7007c0fa56e13f4024f9017c5fix nag scam test by removing mpi-serial settingeditcime_config/usermods_dirs/scam_mandatory/shell_commandseditcime_config/testdefs/testmods_dirs/cam/scmarm/shell_commandsdoc/ChangeLogf670356189ff114cc74939e305ae21a91bd6c6ea1686022939000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2023-06-05 21:42:19 -0600f670356189ff114cc74939e305ae21a91bd6c6eaupdate ChangeLogeditdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xmla86abc008a56588bdcf3a786b6624661d0834a321686030353000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comremove mpas files as we need to create new ones for updated bedmachine topography 2023-06-05 23:45:53 -0600a86abc008a56588bdcf3a786b6624661d0834a32remove mpas files as we need to create new ones for updated bedmachine topographyeditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xml62cbd9ade8a2480e85a6136671ffdcc0e5dc2a011686031579000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comadd initial 'c' for cycle count 2023-06-06 00:06:19 -060062cbd9ade8a2480e85a6136671ffdcc0e5dc2a01add initial 'c' for cycle counteditbld/namelist_files/namelist_defaults_cam.xmlmanage_externals/test/test_unit_externals_description.pymanage_externals/.travis.ymlmanage_externals/.gitignoremanage_externals/test/test_unit_repository_git.pymanage_externals/manic/sourcetree.pymanage_externals/test/test_sys_repository_git.pymanage_externals/manic/externals_status.pymanage_externals/test/test_unit_utils.pymanage_externals/manic/utils.pymanage_externals/test/repos/README.mdmanage_externals/test/test_unit_externals_status.pymanage_externals/manic/externals_description.pymanage_externals/manic/repository_factory.pymanage_externals/manic/checkout.pymanage_externals/manic/repository_svn.pymanage_externals/test/test_sys_checkout.pymanage_externals/checkout_externalsmanage_externals/test/README.mdmanage_externals/test/test_unit_repository.pymanage_externals/.github/workflows/tests.ymlmanage_externals/manic/repository_git.pymanage_externals/README.mdmanage_externals/.github/workflows/bumpversion.ymlmanage_externals/test/test_unit_repository_svn.py3a12b3358ab3a4af3d0dfc9b1d60f989e7f43ba71686062582000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comRevert "cam6_3_113: Update manage_externals" 2023-06-06 08:43:02 -06003a12b3358ab3a4af3d0dfc9b1d60f989e7f43ba7Revert "cam6_3_113: Update manage_externals"editmanage_externals/manic/utils.pyeditmanage_externals/manic/externals_description.pyeditmanage_externals/test/test_sys_checkout.pydeletemanage_externals/test/repos/README.mdeditmanage_externals/test/test_unit_repository.pyeditmanage_externals/test/test_unit_utils.pyeditmanage_externals/.travis.ymleditmanage_externals/checkout_externalseditmanage_externals/test/test_sys_repository_git.pyeditmanage_externals/test/test_unit_externals_status.pyeditmanage_externals/.gitignoreeditmanage_externals/manic/repository_factory.pyeditmanage_externals/manic/checkout.pyeditmanage_externals/test/README.mdeditmanage_externals/manic/repository_git.pyeditmanage_externals/test/test_unit_externals_description.pyeditmanage_externals/test/test_unit_repository_svn.pyeditmanage_externals/README.mdeditmanage_externals/manic/sourcetree.pyeditmanage_externals/test/test_unit_repository_git.pydeletemanage_externals/.github/workflows/tests.ymleditmanage_externals/manic/repository_svn.pyeditmanage_externals/manic/externals_status.pydeletemanage_externals/.github/workflows/bumpversion.ymlbld/namelist_files/namelist_defaults_cam.xml506871b9a7fba361d0d8cb205f143e182dc5da2a1686068831000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comrename and update metadata for new coarse grid boundary data 2023-06-06 10:27:11 -0600506871b9a7fba361d0d8cb205f143e182dc5da2arename and update metadata for new coarse grid boundary dataeditbld/namelist_files/namelist_defaults_cam.xmlmanage_externals/test/test_unit_externals_description.pymanage_externals/.travis.ymlmanage_externals/test/test_unit_repository_git.pymanage_externals/manic/utils.pymanage_externals/test/repos/README.mdmanage_externals/manic/repository_factory.pymanage_externals/checkout_externalsmanage_externals/test/README.mdmanage_externals/README.mdmanage_externals/test/test_unit_repository_svn.pymanage_externals/.gitignoremanage_externals/manic/sourcetree.pymanage_externals/test/test_sys_repository_git.pymanage_externals/manic/externals_status.pydoc/ChangeLogmanage_externals/test/test_unit_utils.pymanage_externals/test/test_unit_externals_status.pymanage_externals/manic/externals_description.pymanage_externals/manic/checkout.pymanage_externals/manic/repository_svn.pymanage_externals/test/test_sys_checkout.pymanage_externals/.github/workflows/tests.ymlmanage_externals/test/test_unit_repository.pymanage_externals/manic/repository_git.pymanage_externals/.github/workflows/bumpversion.ymlc3ea20b83ace69956876f1135250a472e26d69b71686071343000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate manage_externals 2023-06-06 11:09:03 -0600c3ea20b83ace69956876f1135250a472e26d69b7Update manage_externalseditmanage_externals/manic/externals_description.pyeditmanage_externals/manic/externals_status.pyeditmanage_externals/test/test_unit_repository_git.pyaddmanage_externals/.github/workflows/tests.ymleditmanage_externals/test/test_unit_externals_description.pyeditmanage_externals/.gitignoreeditmanage_externals/test/test_unit_externals_status.pyeditmanage_externals/test/test_unit_repository.pyeditmanage_externals/test/README.mdeditmanage_externals/manic/utils.pyeditmanage_externals/.travis.ymladdmanage_externals/test/repos/README.mdeditmanage_externals/test/test_sys_repository_git.pyeditmanage_externals/manic/repository_git.pyeditmanage_externals/test/test_unit_utils.pyeditmanage_externals/manic/sourcetree.pyeditmanage_externals/manic/checkout.pyeditmanage_externals/manic/repository_factory.pyeditmanage_externals/checkout_externalseditmanage_externals/test/test_sys_checkout.pyeditmanage_externals/test/test_unit_repository_svn.pyeditmanage_externals/manic/repository_svn.pyeditdoc/ChangeLogeditmanage_externals/README.mdaddmanage_externals/.github/workflows/bumpversion.ymlExternals.cfgcime_config/testdefs/testlist_cam.xml1d32d9dd75e5254b62340055d55adf91e6241a541686071446000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comclean up Externals and add ne3pg3 test to testlist 2023-06-06 11:10:46 -06001d32d9dd75e5254b62340055d55adf91e6241a54clean up Externals and add ne3pg3 test to testlisteditExternals.cfgeditcime_config/testdefs/testlist_cam.xmldoc/ChangeLog9d0aafe9372da3a6186e89a0d1c9df2a6d75ddeb1686071801000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix PR number 2023-06-06 11:16:41 -06009d0aafe9372da3a6186e89a0d1c9df2a6d75ddebFix PR numbereditdoc/ChangeLogdoc/ChangeLog404edb0060670ef0c7bd9c66bdbbf1c00b853e661686077233000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-06-06 12:47:13 -0600404edb0060670ef0c7bd9c66bdbbf1c00b853e66ChangeLog updateeditdoc/ChangeLogdoc/ChangeLogf527c3cce8b806a2e7e4d287139e0a6a49c0eac11686079264000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comChangeLog updates testing will have to be redone but I put some of my non pending results in there for now 2023-06-06 13:21:04 -0600f527c3cce8b806a2e7e4d287139e0a6a49c0eac1ChangeLog updates testing will have to be redone but I put some of my non pending results in there for noweditdoc/ChangeLogcime_config/config_pes.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/build-namelista2142fd39c5aa34939a22c1fdf2d06c80200c5861686177420000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd a few more namelists and remove PE layout for MT 2023-06-07 16:37:00 -0600a2142fd39c5aa34939a22c1fdf2d06c80200c586Add a few more namelists and remove PE layout for MTeditbld/namelist_files/namelist_defaults_cam.xmleditcime_config/config_pes.xmleditbld/build-namelistExternals.cfg766e598f31ebbe81492a4a85527daf17514e2a461686243859000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate externals to cesm2_3_beta14 2023-06-08 11:04:19 -0600766e598f31ebbe81492a4a85527daf17514e2a46Update externals to cesm2_3_beta14editExternals.cfgdoc/ChangeLogd02250751b24df15e519ce63970e620bbd0630a01686259236000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_114 2023-06-08 15:20:36 -0600d02250751b24df15e519ce63970e620bbd0630a0Update ChangeLog for cam6_3_114editdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xmlbld/build-namelist416f5a19369d35e01aaf22246a37ad0fd08031e41686266676000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdates based on reviewer comments 2023-06-08 17:24:36 -0600416f5a19369d35e01aaf22246a37ad0fd08031e4Updates based on reviewer commentseditbld/build-namelisteditbld/namelist_files/namelist_defaults_cam.xmlcime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlbaedc57adb328747e56556929264767b62c3e0531686291873000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comupdate hemco_config path to new for SMS test; update tests 2023-06-09 02:24:33 -0400baedc57adb328747e56556929264767b62c3e053update hemco_config path to new for SMS test; update testseditcime_config/testdefs/testlist_cam.xmleditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/build-namelistbc4f7c4f70f66272e93655f116d129879ce653601686422188000http://carson.math.uwm.edu/jenkins/user/eatoneatoneaton@alum.mit.eduadd microp_mg_dcs defaults to build-namelist 2023-06-10 14:36:28 -0400bc4f7c4f70f66272e93655f116d129879ce65360add microp_mg_dcs defaults to build-namelisteditbld/namelist_files/namelist_defaults_cam.xmleditbld/build-namelistbld/namelist_files/namelist_defaults_cam.xmlbld/build-namelista49161200b41f67139a241273889a493de69ca431686850059000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd additional namelist settings 2023-06-15 11:27:39 -0600a49161200b41f67139a241273889a493de69ca43Add additional namelist settingseditbld/namelist_files/namelist_defaults_cam.xmleditbld/build-namelistbld/namelist_files/namelist_defaults_cam.xml174fd6a32921f0bbaa7f6aaf64769820126dbb5b1686851888000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduOne more namelist cleanup 2023-06-15 11:58:08 -0600174fd6a32921f0bbaa7f6aaf64769820126dbb5bOne more namelist cleanupeditbld/namelist_files/namelist_defaults_cam.xmlcime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_definition.xmlbld/namelist_files/namelist_defaults_cam.xml49eb17e5f0be10fe1652c77cc7ac84e6f4537d751686852730000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comWIP: Allow ovverride of and DiagnFile using namelist properties within the CESM environment. 2023-06-15 14:12:10 -040049eb17e5f0be10fe1652c77cc7ac84e6f4537d75WIP: Allow ovverride of and DiagnFile using namelist properties within the CESM environment.editbld/namelist_files/namelist_defaults_cam.xmleditcime_config/testdefs/testlist_cam.xmleditbld/namelist_files/namelist_definition.xmlbld/build-nameliste4122a0c888953ae1ecb793e3b2ef4d3d972e6731686853761000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate build-namelist to include new namelist variables. 2023-06-15 14:29:21 -0400e4122a0c888953ae1ecb793e3b2ef4d3d972e673Update build-namelist to include new namelist variables.editbld/build-namelistExternals_CAM.cfg719529954b6db98d910dba8404097187fa0449281686855161000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comUpdate HEMCO-CESM upstream to hemco-cesm1_2_0_hemco3_6_2_cesm 2023-06-15 14:52:41 -0400719529954b6db98d910dba8404097187fa044928Update HEMCO-CESM upstream to hemco-cesm1_2_0_hemco3_6_2_cesmeditExternals_CAM.cfgcime_config/testdefs/testlist_cam.xml59697d1d03d85507969d973ba9071821711592b81686855188000http://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linjimmie.lin@gmail.comRevert extra tests added for testing 2023-06-15 14:53:08 -040059697d1d03d85507969d973ba9071821711592b8Revert extra tests added for testingeditcime_config/testdefs/testlist_cam.xmlsrc/chemistry/pp_waccm_ma_mam5/chem_mech.in0a098a58f6de833ae6a2d23fa23ac9f8a57483401686866072000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd O3S to waccm_ma_mam5 2023-06-15 15:54:32 -06000a098a58f6de833ae6a2d23fa23ac9f8a5748340add O3S to waccm_ma_mam5editsrc/chemistry/pp_waccm_ma_mam5/chem_mech.indoc/ChangeLog0ec67208daa9ea410533b1fab274b430886d2ad31687280559000http://carson.math.uwm.edu/jenkins/user/johnjohnjohn@thetruesdales.comUpdated Changelog to remove Externals.cfg from this PR since that file was updated in 6_3_114 2023-06-20 11:02:39 -06000ec67208daa9ea410533b1fab274b430886d2ad3Updated Changelog to remove Externals.cfg from this PR since that file was updated in 6_3_114editdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xmlcime_config/config_compsets.xmlbld/build-namelist2938eca51e103cf5613086cde7b92e1a0f5b490c1687296421000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFurther refinement based on discussion at planning meeting 2023-06-20 15:27:01 -06002938eca51e103cf5613086cde7b92e1a0f5b490cFurther refinement based on discussion at planning meetingeditcime_config/config_compsets.xmleditbld/namelist_files/namelist_defaults_cam.xmleditbld/build-namelistbld/build-namelist09aa9fc017293c5131caf65c2cb89bb42f4a2fa81687301851000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAddress additional reviewer comments 2023-06-20 16:57:31 -060009aa9fc017293c5131caf65c2cb89bb42f4a2fa8Address additional reviewer commentseditbld/build-namelistbld/build-namelist0e953912df24cd9d8b7be42b23ef26dbd3bdda141687302652000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduone more reviewer change 2023-06-20 17:10:52 -06000e953912df24cd9d8b7be42b23ef26dbd3bdda14one more reviewer changeeditbld/build-namelistsrc/control/cam_history.F90src/dynamics/se/dycore/fvm_consistent_se_cslam.F906284f5dd221d8b96059bc01e5b810ab78d71b7881687355094000http://carson.math.uwm.edu/jenkins/user/jedwardsjedwardsjedwards@ucar.eduadd pointers for intel performance, remove unused PI variable for nvhpc 2023-06-21 07:44:54 -06006284f5dd221d8b96059bc01e5b810ab78d71b788add pointers for intel performance, remove unused PI variable for nvhpceditsrc/control/cam_history.F90editsrc/dynamics/se/dycore/fvm_consistent_se_cslam.F90doc/ChangeLog728dba7c4be64fde876a01c1a847483667b4c2181687366371000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduupdate Changelog for tagging 2023-06-21 10:52:51 -0600728dba7c4be64fde876a01c1a847483667b4c218update Changelog for taggingeditdoc/ChangeLogdoc/ChangeLog1b5f1e13d0f8e51944245e08f67e788c2704fb9f1687366426000http://carson.math.uwm.edu/jenkins/user/jetjetjet@ucar.eduupdate Changelog for tagging take 2 2023-06-21 10:53:46 -06001b5f1e13d0f8e51944245e08f67e788c2704fb9fupdate Changelog for tagging take 2editdoc/ChangeLogsrc/chemistry/pp_waccm_ma_mam5/chem_mech.docsrc/chemistry/pp_waccm_ma_mam5/mo_indprd.F90bld/build-namelistsrc/chemistry/pp_waccm_ma_mam5/mo_sim_dat.F90src/chemistry/pp_waccm_ma_mam5/mo_nln_matrix.F90src/chemistry/pp_waccm_ma_mam5/mo_prod_loss.F90src/chemistry/pp_waccm_ma_mam5/mo_lin_matrix.F90src/physics/cam/gw_drag.F90src/chemistry/pp_waccm_ma_mam5/m_spc_id.F90bld/namelist_files/namelist_defaults_cam.xmlsrc/chemistry/pp_waccm_ma_mam5/chem_mech.inbld/namelist_files/namelist_definition.xmlsrc/chemistry/pp_waccm_ma_mam5/mo_rxt_rates_conv.F90src/chemistry/pp_waccm_ma_mam5/chem_mods.F90a90ebf51394212d09a2ae65bf38f8b485db621ec1687378941000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufront_gaussian_wdith namelist param; set O3S_Loss rate; move O3S to explicit solver modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/namelist_definition.xml modified: src/chemistry/pp_waccm_ma_mam5/chem_mech.doc modified: src/chemistry/pp_waccm_ma_mam5/chem_mech.in modified: src/chemistry/pp_waccm_ma_mam5/chem_mods.F90 modified: src/chemistry/pp_waccm_ma_mam5/m_spc_id.F90 modified: src/chemistry/pp_waccm_ma_mam5/mo_indprd.F90 modified: src/chemistry/pp_waccm_ma_mam5/mo_lin_matrix.F90 modified: src/chemistry/pp_waccm_ma_mam5/mo_nln_matrix.F90 modified: src/chemistry/pp_waccm_ma_mam5/mo_prod_loss.F90 modified: src/chemistry/pp_waccm_ma_mam5/mo_rxt_rates_conv.F90 modified: src/chemistry/pp_waccm_ma_mam5/mo_sim_dat.F90 modified: src/physics/cam/gw_drag.F90 2023-06-21 14:22:21 -0600a90ebf51394212d09a2ae65bf38f8b485db621ecfront_gaussian_wdith namelist param; set O3S_Loss rate; move O3S to explicit solvereditsrc/chemistry/pp_waccm_ma_mam5/chem_mods.F90editbld/namelist_files/namelist_definition.xmleditsrc/chemistry/pp_waccm_ma_mam5/mo_nln_matrix.F90editsrc/chemistry/pp_waccm_ma_mam5/mo_sim_dat.F90editsrc/chemistry/pp_waccm_ma_mam5/chem_mech.doceditsrc/chemistry/pp_waccm_ma_mam5/mo_prod_loss.F90editsrc/chemistry/pp_waccm_ma_mam5/chem_mech.ineditsrc/chemistry/pp_waccm_ma_mam5/m_spc_id.F90editsrc/physics/cam/gw_drag.F90editbld/namelist_files/namelist_defaults_cam.xmleditsrc/chemistry/pp_waccm_ma_mam5/mo_indprd.F90editsrc/chemistry/pp_waccm_ma_mam5/mo_rxt_rates_conv.F90editbld/build-namelisteditsrc/chemistry/pp_waccm_ma_mam5/mo_lin_matrix.F90src/physics/simple/frierson.F90src/physics/simple/frierson_cam.F90bld/namelist_files/use_cases/dctest_frierson.xmldd346f73cbbe18e8844ccb2221eca88cb7abf8a61687386797000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduAdd TOA fields for three fluxes 2023-06-21 16:33:17 -0600dd346f73cbbe18e8844ccb2221eca88cb7abf8a6Add TOA fields for three fluxeseditsrc/physics/simple/frierson.F90editsrc/physics/simple/frierson_cam.F90editbld/namelist_files/use_cases/dctest_frierson.xmlbld/namelist_files/use_cases/sd_waccmx_ma_cam6.xmlbld/namelist_files/use_cases/waccmx_ma_hist_cam6.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/use_cases/waccmx_ma_2000_cam6.xml1a0d49ca16ee067c8ec8750f382bddf6b5cb16781687469989000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrections for waccmx modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/use_cases/sd_waccmx_ma_cam6.xml modified: bld/namelist_files/use_cases/waccmx_ma_2000_cam6.xml modified: bld/namelist_files/use_cases/waccmx_ma_hist_cam6.xml 2023-06-22 15:39:49 -06001a0d49ca16ee067c8ec8750f382bddf6b5cb1678corrections for waccmxeditbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/use_cases/waccmx_ma_2000_cam6.xmleditbld/namelist_files/use_cases/sd_waccmx_ma_cam6.xmleditbld/namelist_files/use_cases/waccmx_ma_hist_cam6.xmlsrc/chemistry/mozart/chemistry.F90src/chemistry/mozart/mo_srf_emissions.F9079208adb4e564696369230a3f6d868d6583085d01687546508000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd SF*** history fields only when needed modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/mo_srf_emissions.F90 2023-06-23 12:55:08 -060079208adb4e564696369230a3f6d868d6583085d0add SF*** history fields only when needededitsrc/chemistry/mozart/mo_srf_emissions.F90editsrc/chemistry/mozart/chemistry.F90bld/namelist_files/use_cases/1850_cam_mt.xmlbld/namelist_files/use_cases/hist_cam_mt.xmlbld/namelist_files/use_cases/1850_cam_lt.xmlbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/use_cases/hist_cam_lt.xml8098ad6ff279597ae894041a7a1711dc3cff4f651687552981000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate LT file and remove ncdata files from use_cases 2023-06-23 14:43:01 -06008098ad6ff279597ae894041a7a1711dc3cff4f65Update LT file and remove ncdata files from use_caseseditbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/use_cases/hist_cam_lt.xmleditbld/namelist_files/use_cases/1850_cam_mt.xmleditbld/namelist_files/use_cases/hist_cam_mt.xmleditbld/namelist_files/use_cases/1850_cam_lt.xmldoc/ChangeLogbc8887a748b6e50818f5f1bda5a09f2e221a624d1687555018000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduChangeLog for cam6_3_116 2023-06-23 15:16:58 -0600bc8887a748b6e50818f5f1bda5a09f2e221a624dChangeLog for cam6_3_116editdoc/ChangeLogdoc/ChangeLogbld/namelist_files/namelist_defaults_cam.xmlfbc3da93014f4d426b44b35eb0999c69de5c90b51687558016000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate MT file 2023-06-23 16:06:56 -0600fbc3da93014f4d426b44b35eb0999c69de5c90b5Update MT fileeditdoc/ChangeLogeditbld/namelist_files/namelist_defaults_cam.xmlbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmlbld/namelist_files/use_cases/2000_cam4_trop_chem.xmlbld/namelist_files/use_cases/sd_waccm_tsmlt_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xml000afea9335356b05412d412e8169ecf0974be9c1687890078000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove SFNO2 from fincl lists in use case files modified: bld/namelist_files/use_cases/2000_cam4_trop_chem.xml modified: bld/namelist_files/use_cases/sd_waccm_tsmlt_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xml 2023-06-27 12:21:18 -0600000afea9335356b05412d412e8169ecf0974be9cremove SFNO2 from fincl lists in use case fileseditbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmleditbld/namelist_files/use_cases/sd_waccm_tsmlt_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmleditbld/namelist_files/use_cases/2000_cam4_trop_chem.xmlsrc/chemistry/mozart/mo_chm_diags.F900d23687b8a85d4d6a239cdd5266f7a47ac40464e1687890743000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edudry dep diags only for species that have dry dep modified: src/chemistry/mozart/mo_chm_diags.F90 2023-06-27 12:32:23 -06000d23687b8a85d4d6a239cdd5266f7a47ac40464edry dep diags only for species that have dry depeditsrc/chemistry/mozart/mo_chm_diags.F90bld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmlf569cb2ddf966cff8e949645b7fbef0091efa26d1687965090000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduremove SFDMS history field from fincl modified: bld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xml 2023-06-28 09:11:30 -0600f569cb2ddf966cff8e949645b7fbef0091efa26dremove SFDMS history field from fincleditbld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmlcime_config/config_component.xmld53f6a9485f3c6f72f0fca23345b54d87b8aa50e1687969603000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFix bad merge line 2023-06-28 10:26:43 -0600d53f6a9485f3c6f72f0fca23345b54d87b8aa50eFix bad merge lineeditcime_config/config_component.xmldoc/ChangeLogf2a403080de1037ecdac64a1d95cd40c6eb345921687993724000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ChangeLog for cam6_3_117 2023-06-28 17:08:44 -0600f2a403080de1037ecdac64a1d95cd40c6eb34592Update ChangeLog for cam6_3_117editdoc/ChangeLogbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmlbld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmlsrc/chemistry/mozart/chemistry.F90src/chemistry/mozart/ocean_emis.F90src/chemistry/mozart/mo_neu_wetdep.F90bld/namelist_files/use_cases/hist_trop_strat_nudged_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmlbld/namelist_files/use_cases/hist_trop_strat_vbs_cam6.xml5aee9b7c767e8d49e7dbe8b89df41bc819e3f57d1688652594000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduuse SPS585 emissions; restrict default out of SF fields; shorten fincl1 lists in use cases modified: bld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xml modified: bld/namelist_files/use_cases/hist_trop_strat_nudged_cam6.xml modified: bld/namelist_files/use_cases/hist_trop_strat_vbs_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xml modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/mo_neu_wetdep.F90 modified: src/chemistry/mozart/ocean_emis.F90 2023-07-06 08:09:54 -06005aee9b7c767e8d49e7dbe8b89df41bc819e3f57duse SPS585 emissions; restrict default out of SF fields; shorten fincl1 lists in use caseseditsrc/chemistry/mozart/chemistry.F90editbld/namelist_files/use_cases/hist_trop_strat_nudged_cam6.xmleditbld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmleditbld/namelist_files/use_cases/hist_trop_strat_vbs_cam6.xmleditsrc/chemistry/mozart/ocean_emis.F90editsrc/chemistry/mozart/mo_neu_wetdep.F90cime_config/testdefs/testlist_cam.xmlbld/namelist_files/namelist_definition.xmleb3b8f0f221917cf302bf7ef8d80f842316bfeff1688998738000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduhemco compsets not supported 2023-07-10 08:18:58 -0600eb3b8f0f221917cf302bf7ef8d80f842316bfeffhemco compsets not supportededitcime_config/testdefs/testlist_cam.xmleditbld/namelist_files/namelist_definition.xmlbld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmlsrc/chemistry/mozart/chemistry.F90src/chemistry/mozart/ocean_emis.F90c88f5db0c11695152ccbac2dab60e003d293a7551689369022000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumisc changes for Jesse's code review modified: bld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xml modified: src/chemistry/mozart/chemistry.F90 modified: src/chemistry/mozart/ocean_emis.F90 2023-07-14 15:10:22 -0600c88f5db0c11695152ccbac2dab60e003d293a755misc changes for Jesse's code revieweditsrc/chemistry/mozart/chemistry.F90editbld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmleditsrc/chemistry/mozart/ocean_emis.F90doc/ChangeLog6142c796888827eadc6401ee9c10e215331011511689603806000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-07-17 08:23:26 -06006142c796888827eadc6401ee9c10e21533101151ChangeLog updateeditdoc/ChangeLogsrc/chemistry/mozart/ocean_emis.F909e14c5213b9f3a31d9a5f4156c36031fe098f8331689606715000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrect typo modified: src/chemistry/mozart/ocean_emis.F90 2023-07-17 09:11:55 -06009e14c5213b9f3a31d9a5f4156c36031fe098f833correct typoeditsrc/chemistry/mozart/ocean_emis.F90doc/ChangeLog123046887817561c73a968c0cdebb19b2ad607321689612249000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-07-17 10:44:09 -0600123046887817561c73a968c0cdebb19b2ad60732ChangeLog drafteditdoc/ChangeLogsrc/chemistry/mozart/chemistry.F905c5cc59e6ccd3889d36ca8d7dfb54b0885cd32c21689618382000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd_default CT_H2O needs to be after addfld modified: src/chemistry/mozart/chemistry.F90 2023-07-17 12:26:22 -06005c5cc59e6ccd3889d36ca8d7dfb54b0885cd32c2add_default CT_H2O needs to be after addfldeditsrc/chemistry/mozart/chemistry.F90doc/ChangeLog4b59bd902e7ad846e26f6d3fa8e058fdf1ac41011689633077000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-07-17 16:31:17 -06004b59bd902e7ad846e26f6d3fa8e058fdf1ac4101ChangeLog updateeditdoc/ChangeLogbld/namelist_files/use_cases/sd_trop_strat_vbs_cam6.xml4580462a922f116ee8604d29f3917a111ac480531689711897000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduset history_chemistry=.true. and shorten fincl1 list modified: bld/namelist_files/use_cases/sd_trop_strat_vbs_cam6.xml 2023-07-18 14:24:57 -06004580462a922f116ee8604d29f3917a111ac48053set history_chemistry=.true. and shorten fincl1 listeditbld/namelist_files/use_cases/sd_trop_strat_vbs_cam6.xmlbld/namelist_files/use_cases/hist_trop_strat_vbs_cam6.xml9bd0091e94175b5433f545ab5a8d30cc3b6d8cb21689776185000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educorrection to fincl list modified: bld/namelist_files/use_cases/hist_trop_strat_vbs_cam6.xml 2023-07-19 08:16:25 -06009bd0091e94175b5433f545ab5a8d30cc3b6d8cb2correction to fincl listeditbld/namelist_files/use_cases/hist_trop_strat_vbs_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmldoc/ChangeLogbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmlf6e13d8d2d32a4c6b8c614c8e38506388d0683a61689780462000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumore tweaks to fincl lists in waccm use cases modified: bld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xml modified: bld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xml modified: doc/ChangeLog 2023-07-19 09:27:42 -0600f6e13d8d2d32a4c6b8c614c8e38506388d0683a6more tweaks to fincl lists in waccm use caseseditbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmleditdoc/ChangeLogeditbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmldoc/ChangeLog95e6e3b62a43a2cb8000766a5675b7d933aa17181689794745000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduupdate ChangeLog 2023-07-19 13:25:45 -060095e6e3b62a43a2cb8000766a5675b7d933aa1718update ChangeLogeditdoc/ChangeLogdoc/ChangeLogdaa0a804c3c8f8c1542091a21410f64380919b401689795470000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edufix ChangeLog 2023-07-19 13:37:50 -0600daa0a804c3c8f8c1542091a21410f64380919b40fix ChangeLogeditdoc/ChangeLogdoc/ChangeLogd3ca97c666bd123d7c2a64be6e3a237ee11a62c21690487123000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-07-27 13:45:23 -0600d3ca97c666bd123d7c2a64be6e3a237ee11a62c2ChangeLog drafteditdoc/ChangeLogbld/namelist_files/namelist_definition.xmlsrc/physics/cam/clubb_intr.F90cime_config/usermods_dirs/scam_mandatory/shell_commands2027a6a198dff7726ed913891953151d25a7544b1690498136000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduUpdates bringing back in Larson-group updates lost in merge 2023-07-27 16:48:56 -06002027a6a198dff7726ed913891953151d25a7544bUpdates bringing back in Larson-group updates lost in mergeeditcime_config/usermods_dirs/scam_mandatory/shell_commandseditbld/namelist_files/namelist_definition.xmleditsrc/physics/cam/clubb_intr.F90doc/ChangeLog2ce8aedd423f74e59537a0c32e87c89bedf0ac231690501063000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-07-27 17:37:43 -06002ce8aedd423f74e59537a0c32e87c89bedf0ac23ChangeLog updateeditdoc/ChangeLogbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmlcime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_camcime_config/usermods_dirs/CMIP6_BHIST_WACCM/user_nl_cambld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmlbld/namelist_files/use_cases/hist_trop_strat_nudged_cam6.xmlcime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_cambld/namelist_files/use_cases/2000_trop_strat_vbs_cam6.xmlcime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/shell_commandsbld/namelist_files/use_cases/sd_trop_strat_vbs_cam6.xmlcime_config/testdefs/testmods_dirs/cam/outfrq9s/user_nl_cambld/namelist_files/use_cases/2010_trop_strat_vbs_cam6.xmlcime_config/usermods_dirs/CMIP6_BHIST/user_nl_cambld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmlbld/namelist_files/use_cases/hist_trop_strat_vbsext_cam6.xmlcime_config/usermods_dirs/CMIP6_B1850_WACCM/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_clmbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmlbld/namelist_files/use_cases/sd_trop_strat2_cam6.xmlsrc/utils/table_interp_mod.F90cime_config/testdefs/testmods_dirs/cam/outfrq1s/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_clmcime_config/usermods_dirs/CMIP6_GENERIC/user_nl_cambld/namelist_files/use_cases/sd_waccm_tsmlt_cam6.xmlcime_config/usermods_dirs/CMIP6_B1850/user_nl_cambld/namelist_files/use_cases/hist_trop_strat_vbs_cam6.xmlbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmlsrc/physics/cam/modal_aer_opt.F90fa4a778bcc83a76768f636eb282120db6a9ee4691690919906000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edumerge in branch cam6_3_112_aeropts 2023-08-01 13:58:26 -0600fa4a778bcc83a76768f636eb282120db6a9ee469merge in branch cam6_3_112_aeroptsaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_cameditbld/namelist_files/use_cases/sd_trop_strat2_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_hist_cam6.xmleditbld/namelist_files/use_cases/hist_trop_strat_nudged_cam6.xmleditbld/namelist_files/use_cases/hist_trop_strat_vbsext_cam6.xmleditbld/namelist_files/use_cases/2010_trop_strat_vbs_cam6.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_cameditbld/namelist_files/use_cases/sd_trop_strat_vbs_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_1850_cam6.xmladdsrc/utils/table_interp_mod.F90editcime_config/usermods_dirs/CMIP6_BHIST_WACCM/user_nl_cameditbld/namelist_files/use_cases/2000_trop_strat_vbs_cam6.xmleditcime_config/usermods_dirs/CMIP6_B1850_WACCM/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq1s/shell_commandsaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_clmeditcime_config/usermods_dirs/CMIP6_B1850/user_nl_cameditbld/namelist_files/use_cases/hist_trop_strat_vbs_cam6.xmladdcime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_clmeditbld/namelist_files/use_cases/waccm_tsmlt_2010_cam6.xmleditcime_config/testdefs/testmods_dirs/cam/outfrq9s/user_nl_cameditbld/namelist_files/use_cases/hist_trop_strat_vbsfire_cam6.xmleditbld/namelist_files/use_cases/waccm_tsmlt_2000_cam6.xmleditbld/namelist_files/use_cases/sd_waccm_tsmlt_cam6.xmleditcime_config/usermods_dirs/CMIP6_BHIST/user_nl_camaddcime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/shell_commandseditcime_config/usermods_dirs/CMIP6_GENERIC/user_nl_cameditsrc/physics/cam/modal_aer_opt.F90cime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq1s/shell_commandscime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_clmsrc/physics/cam/modal_aer_opt.F90cime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_camcime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_clmcime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/shell_commandsf773283753c2e4d709670dfb2745152a7bc437881690922202000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educlean up modified: src/physics/cam/modal_aer_opt.F90 deleted: cime_config/testdefs/testmods_dirs/cam/outfrq1s/shell_commands deleted: cime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_cam deleted: cime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_clm deleted: cime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/shell_commands deleted: cime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_cam deleted: cime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_clm 2023-08-01 14:36:42 -0600f773283753c2e4d709670dfb2745152a7bc43788clean updeletecime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_camdeletecime_config/testdefs/testmods_dirs/cam/outfrq1s/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_clmdeletecime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/shell_commandsdeletecime_config/testdefs/testmods_dirs/cam/outfrq3s_mam_raddiags/user_nl_cameditsrc/physics/cam/modal_aer_opt.F90deletecime_config/testdefs/testmods_dirs/cam/outfrq1s/user_nl_clmsrc/physics/cam/modal_aer_opt.F90src/utils/table_interp_mod.F90ddd90303849d2af921b505513250be23d97f5dc91690992481000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edudo not extrapolate beyond the edges of the table modified: src/physics/cam/modal_aer_opt.F90 modified: src/utils/table_interp_mod.F90 2023-08-02 10:08:01 -0600ddd90303849d2af921b505513250be23d97f5dc9do not extrapolate beyond the edges of the tableeditsrc/physics/cam/modal_aer_opt.F90editsrc/utils/table_interp_mod.F90cime_config/testdefs/testmods_dirs/cam/outfrq9s/user_nl_camd4a5cdf7ea334df43944367402f1d4dc170cd4a31691001789000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.edurevert change to outfrq9s/user_nl_cam 2023-08-02 12:43:09 -0600d4a5cdf7ea334df43944367402f1d4dc170cd4a3revert change to outfrq9s/user_nl_cameditcime_config/testdefs/testmods_dirs/cam/outfrq9s/user_nl_camdoc/ChangeLogd32706c26f0c996354e0b5577cf9af0f9fc822281691003573000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog draft 2023-08-02 13:12:53 -0600d32706c26f0c996354e0b5577cf9af0f9fc82228ChangeLog drafteditdoc/ChangeLogsrc/physics/simple/radconstants.F90doc/ChangeLog5c1b1378679a675507259dd8feec8f438e5dc2a61691016741000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduadd stub subroutine get_lw_spectral_boundaries for building simple models modified: doc/ChangeLog modified: src/physics/simple/radconstants.F90 2023-08-02 16:52:21 -06005c1b1378679a675507259dd8feec8f438e5dc2a6add stub subroutine get_lw_spectral_boundaries for building simple modelseditsrc/physics/simple/radconstants.F90editdoc/ChangeLogdoc/ChangeLogsrc/utils/table_interp_mod.F903618e7e5fd720c707cad5e906af2bda1992adb991691070556000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduimprove docs modified: doc/ChangeLog modified: src/utils/table_interp_mod.F90 2023-08-03 07:49:16 -06003618e7e5fd720c707cad5e906af2bda1992adb99improve docseditsrc/utils/table_interp_mod.F90editdoc/ChangeLogbld/namelist_files/use_cases/2010_cam6.xmlbld/build-namelistbld/namelist_files/use_cases/2000_cam6.xmlbld/namelist_files/use_cases/waccm_sc_2000_cam6.xmlbld/namelist_files/use_cases/waccm_sc_2010_cam6.xmlbld/namelist_files/namelist_defaults_cam.xml3725a042455bd1fbfb89a5f03bac8e8aed580ed21691162946000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduCorrections to namelist settings modified: bld/build-namelist modified: bld/namelist_files/namelist_defaults_cam.xml modified: bld/namelist_files/use_cases/2000_cam6.xml modified: bld/namelist_files/use_cases/2010_cam6.xml modified: bld/namelist_files/use_cases/waccm_sc_2000_cam6.xml modified: bld/namelist_files/use_cases/waccm_sc_2010_cam6.xml 2023-08-04 09:29:06 -06003725a042455bd1fbfb89a5f03bac8e8aed580ed2Corrections to namelist settingseditbld/namelist_files/use_cases/2010_cam6.xmleditbld/build-namelisteditbld/namelist_files/use_cases/waccm_sc_2000_cam6.xmleditbld/namelist_files/use_cases/waccm_sc_2010_cam6.xmleditbld/namelist_files/namelist_defaults_cam.xmleditbld/namelist_files/use_cases/2000_cam6.xmlbld/namelist_files/namelist_defaults_cam.xml8c5d08934eff4fc58b648c33c5cea10a746745b61691163936000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduCorrections to default 10x15 camchem ic file modified: bld/namelist_files/namelist_defaults_cam.xml 2023-08-04 09:45:36 -06008c5d08934eff4fc58b648c33c5cea10a746745b6Corrections to default 10x15 camchem ic fileeditbld/namelist_files/namelist_defaults_cam.xmlsrc/physics/cam/clubb_intr.F90958a32f4b91b0bbc43fe62e69f8f6e5b39d582951691433770000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduRecent changes needed to run current clubb checkout 2023-08-07 12:42:50 -0600958a32f4b91b0bbc43fe62e69f8f6e5b39d58295Recent changes needed to run current clubb checkouteditsrc/physics/cam/clubb_intr.F90doc/ChangeLogf00ebb6ea414ba076123a385c7d2f18815f091711691534957000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-08-08 16:49:17 -0600f00ebb6ea414ba076123a385c7d2f18815f09171ChangeLog updateeditdoc/ChangeLogdoc/ChangeLog4c502c3912a52c1198f970755f7a5c4e25cb15061691535520000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-08-08 16:58:40 -06004c502c3912a52c1198f970755f7a5c4e25cb1506ChangeLog updateeditdoc/ChangeLogsrc/physics/cam/clubb_intr.F9052f66e84c60727d8d86def8e96343c520987ddf41691535753000http://carson.math.uwm.edu/jenkins/user/kateckateckatec@ucar.eduSmall bug fix 2023-08-08 17:02:33 -060052f66e84c60727d8d86def8e96343c520987ddf4Small bug fixeditsrc/physics/cam/clubb_intr.F90src/physics/cam/modal_aer_opt.F9040d519145ddac201ebdc8db80459331e466cde4f1691679188000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.educode review change requests modified: src/physics/cam/modal_aer_opt.F90 2023-08-10 08:53:08 -060040d519145ddac201ebdc8db80459331e466cde4fcode review change requestseditsrc/physics/cam/modal_aer_opt.F90doc/ChangeLogb601d5a44b50c31128a5e688335a4eb68637f8631691700633000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-08-10 14:50:33 -0600b601d5a44b50c31128a5e688335a4eb68637f863ChangeLog updateeditdoc/ChangeLogdoc/ChangeLog36766c5f59c59999f0e641e74df90f67a5782b841691708007000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-08-10 16:53:27 -060036766c5f59c59999f0e641e74df90f67a5782b84ChangeLog updateeditdoc/ChangeLogdoc/ChangeLogbfaa23e089ef83554a5732c499a95f456fed87771691773765000http://carson.math.uwm.edu/jenkins/user/fvittfvittfvitt@ucar.eduChangeLog update 2023-08-11 11:09:25 -0600bfaa23e089ef83554a5732c499a95f456fed8777ChangeLog updateeditdoc/ChangeLogsrc/control/cam_history.F90d70a8b22b3329e34c9961d600ac66c7251d270be1692049145000http://carson.math.uwm.edu/jenkins/user/jedwardsjedwardsjedwards@ucar.eduimproves history write performance; 2023-08-14 15:39:05 -0600d70a8b22b3329e34c9961d600ac66c7251d270beimproves history write performance;editsrc/control/cam_history.F90Externals_CAM.cfga567f399dd7fcc202401218827e13c0a37dd51241692135989000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduUpdate ALI-ARMS external 2023-08-15 15:46:29 -0600a567f399dd7fcc202401218827e13c0a37dd5124Update ALI-ARMS externaleditExternals_CAM.cfgdoc/ChangeLog72f3f801578bda7d07a0b6ca5d53aef47a2dc2a11692138819000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduPreliminary ChangeLog 2023-08-15 16:33:39 -060072f3f801578bda7d07a0b6ca5d53aef47a2dc2a1Preliminary ChangeLogeditdoc/ChangeLogdoc/ChangeLog2c4d36e986eb8af7eed81d39c497ea768bd7c2121692216635000http://carson.math.uwm.edu/jenkins/user/cacraigcacraigcacraig@ucar.eduFinal ChangeLog for cam6_3_123 2023-08-16 14:10:35 -06002c4d36e986eb8af7eed81d39c497ea768bd7c212Final ChangeLog for cam6_3_123editdoc/ChangeLogsrc/physics/cam/clubb_intr.F90src/physics/cam/subcol_SILHS.F90a3c5a99721ca66e66dd064a94abdc9e6b89e9e751695406736000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduFixing bugs. 2023-09-22 13:18:56 -0500a3c5a99721ca66e66dd064a94abdc9e6b89e9e75Fixing bugs.editsrc/physics/cam/clubb_intr.F90editsrc/physics/cam/subcol_SILHS.F90cime_config_cesm_machines_files/config_machines.xmlrun_scripts/set_up_cam_coarse_res.pycime_config_cesm_machines_files/intel_nelson.cmakecime_config_cesm_machines_files/gnu_nelson.cmakerun_scripts/run_scam.bashrun_scripts/run_cesm_uwm_coarse_res.shcime_config_cesm_machines_files/config_compilers.xml698bfb952b6427626ab0f0fd541644618f4f56021696018224000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduAdding/modifying scripts to make things work. Also a good time to include BIT_CHANGING. 2023-09-29 15:10:24 -0500698bfb952b6427626ab0f0fd541644618f4f5602Adding/modifying scripts to make things work. Also a good time to include BIT_CHANGING.addcime_config_cesm_machines_files/gnu_nelson.cmakeeditrun_scripts/run_cesm_uwm_coarse_res.sheditrun_scripts/set_up_cam_coarse_res.pyaddcime_config_cesm_machines_files/intel_nelson.cmakedeletecime_config_cesm_machines_files/config_compilers.xmleditcime_config_cesm_machines_files/config_machines.xmleditrun_scripts/run_scam.bashjenkins_tests/cam_scam_ifort_ncar_debug_test/Jenkinsfilejenkins_tests/cam_scam_gfortran_test/Jenkinsfilejenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfilejenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile4d480d2b0ffc2fea59f3b09ab81a1208662b79ba1696018848000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduUpdate to jenkinsfiles 2023-09-29 15:20:48 -05004d480d2b0ffc2fea59f3b09ab81a1208662b79baUpdate to jenkinsfileseditjenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfileeditjenkins_tests/cam_scam_ifort_ncar_debug_test/Jenkinsfileeditjenkins_tests/cam_scam_gfortran_test/Jenkinsfileeditjenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfilejenkins_tests/cam_scam_ifort_ncar_debug_test/Jenkinsfilejenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfilejenkins_tests/cam_scam_gfortran_test/Jenkinsfilejenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile446657ebaebbec1e2efa6e9a6c88aba37a01d1881696018961000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduUpdate to jenkinsfiles again 2023-09-29 15:22:41 -0500446657ebaebbec1e2efa6e9a6c88aba37a01d188Update to jenkinsfiles againeditjenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfileeditjenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfileeditjenkins_tests/cam_scam_gfortran_test/Jenkinsfileeditjenkins_tests/cam_scam_ifort_ncar_debug_test/Jenkinsfilejenkins_tests/cam_scam_ifort_ncar_debug_test/Jenkinsfilejenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfilejenkins_tests/cam_scam_gfortran_test/Jenkinsfilejenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile2f8daff6fe68a73520bb4f95867dc562023711bd1696019035000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduUpdate to jenkinsfiles again 2023-09-29 15:23:55 -05002f8daff6fe68a73520bb4f95867dc562023711bdUpdate to jenkinsfiles againeditjenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfileeditjenkins_tests/cam_scam_gfortran_test/Jenkinsfileeditjenkins_tests/cam_scam_ifort_ncar_debug_test/Jenkinsfileeditjenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfilejenkins_tests/cam_scam_ifort_ncar_debug_test/Jenkinsfilerun_scripts/run_scam.bashfc2ef6ac2da046e3abcb24b24d7b73786acd78481696019541000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduSmall updates 2023-09-29 15:32:21 -0500fc2ef6ac2da046e3abcb24b24d7b73786acd7848Small updateseditrun_scripts/run_scam.basheditjenkins_tests/cam_scam_ifort_ncar_debug_test/Jenkinsfilerun_scripts/run_cesm_uwm_coarse_res_r8029_flags.shaf26a1e7043039165c090c95676d48e6d2f726b51696024246000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduUpdates to run script 2023-09-29 16:50:46 -0500af26a1e7043039165c090c95676d48e6d2f726b5Updates to run scripteditrun_scripts/run_cesm_uwm_coarse_res_r8029_flags.shgithttp://carson.math.uwm.edu/jenkins/user/nusbaumenusbaumehttp://carson.math.uwm.edu/jenkins/user/mlandermlanderhttp://carson.math.uwm.edu/jenkins/user/jetjethttp://carson.math.uwm.edu/jenkins/user/eatoneatonhttp://carson.math.uwm.edu/jenkins/user/jimmie.linjimmie.linhttp://carson.math.uwm.edu/jenkins/user/jedwardsjedwardshttp://carson.math.uwm.edu/jenkins/user/patcpatchttp://carson.math.uwm.edu/jenkins/user/kateckatechttp://carson.math.uwm.edu/jenkins/user/pelpelhttp://carson.math.uwm.edu/jenkins/user/mvertensmvertenshttp://carson.math.uwm.edu/jenkins/user/aherringaherringhttp://carson.math.uwm.edu/jenkins/user/peter.hjort.lauritzenpeter.hjort.lauritzenhttp://carson.math.uwm.edu/jenkins/user/johnjohnhttp://carson.math.uwm.edu/jenkins/user/adamrhsteradamrhsterhttp://carson.math.uwm.edu/jenkins/user/goldygoldyhttp://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephensbenjamin.andrew.stephenshttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/fvittfvitthttp://carson.math.uwm.edu/jenkins/user/cacraigcacraighttp://carson.math.uwm.edu/jenkins/user/sunjiansunjianhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhttp://carson.math.uwm.edu/jenkins/user/courtneypcourtneypfalse305http://carson.math.uwm.edu/jenkins/view/all/job/cam_global_ERP_Ln9_gfortran_test/305/303http://carson.math.uwm.edu/jenkins/view/all/job/cam_global_ERP_Ln9_gfortran_test/303/