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</comment><date>2021-06-30 13:18:40 -0500</date><id>cb7db4b128397c3507497736834538878935204e</id><msg>Add error header for CLUBB in CAM</msg><path><editType>edit</editType><file>src/CLUBB_core/error_code.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>microphysics.F90</affectedPath><commitId>e201897ed5e08e49180f087b6283d6f40f1f9227</commitId><timestamp>1625147654000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Adding some preprocessor directives

to get SAM-LES to compile successfully when using MICRO_M2005_UWM instead of MICRO_DRIZZLE.
</comment><date>2021-07-01 08:54:14 -0500</date><id>e201897ed5e08e49180f087b6283d6f40f1f9227</id><msg>Adding some preprocessor directives</msg><path><editType>edit</editType><file>microphysics.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>microphysics.F90</affectedPath><commitId>6c039b29523f694a7e69805364bd82463acebb37</commitId><timestamp>1625149162000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Fixing the ordering of gr in the arg list and dropping usage of grid_class.
</comment><date>2021-07-01 09:19:22 -0500</date><id>6c039b29523f694a7e69805364bd82463acebb37</id><msg>Fixing the ordering of gr in the arg list and dropping usage of grid_class.</msg><path><editType>edit</editType><file>microphysics.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/pdf_closure_module.F90</affectedPath><affectedPath>src/CLUBB_core/mixing_length.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><affectedPath>src/clubb_tuner.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xm_wpxp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_windm_edsclrm_module.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/error.F90</affectedPath><affectedPath>src/CLUBB_core/advance_helper_module.F90</affectedPath><affectedPath>src/CLUBB_core/diffusion.F90</affectedPath><commitId>b19b67713baf175f99baa0cb0bdde6e8c1fbc588</commitId><timestamp>1625149291000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Fixing the ordering of gr in the clubb_api arg list for affected subroutines.
Additionally, this commit removes the clubb code standard violation of exceeding more the 100 characters per line.
Lastly, the grid typing is being added to clubb_api_module as a public variable so that the host models have access to the type without having to bypass the api
For ticket #886.
</comment><date>2021-07-01 09:21:31 -0500</date><id>b19b67713baf175f99baa0cb0bdde6e8c1fbc588</id><msg>Fixing the ordering of gr in the clubb_api arg list for affected subroutines.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/clubb_tuner.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/diffusion.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/pdf_closure_module.F90</file></path><path><editType>edit</editType><file>src/error.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mixing_length.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_helper_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>README</affectedPath><commitId>6cf3881c0b45798234e9315dd165a4adbba00a29</commitId><timestamp>1625154645000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Add blank line to trigger nightly tests.
</comment><date>2021-07-01 10:50:45 -0500</date><id>6cf3881c0b45798234e9315dd165a4adbba00a29</id><msg>Add blank line to trigger nightly tests.</msg><path><editType>edit</editType><file>README</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_windm_edsclrm_module.F90</affectedPath><affectedPath>src/advance_microphys_module.F90</affectedPath><affectedPath>src/CLUBB_core/mixing_length.F90</affectedPath><commitId>2196f2d527e0ddf8b9a2ec77853cd7148c3ebf29</commitId><timestamp>1625160233000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Fixing coding standard violations
</comment><date>2021-07-01 12:23:53 -0500</date><id>2196f2d527e0ddf8b9a2ec77853cd7148c3ebf29</id><msg>Fixing coding standard violations</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mixing_length.F90</file></path><path><editType>edit</editType><file>src/advance_microphys_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>input/case_setups/wangara_sounding.in</affectedPath><commitId>381f3bdb88f44996263d03501401562e39717b25</commitId><timestamp>1625167572000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephens</absoluteUrl><fullName>benjamin.andrew.stephens</fullName></author><authorEmail>benjamin.andrew.stephens@gmail.com</authorEmail><comment>Removing a few lines from wangara_sounding.in to be consistent with SAM "snd" and "lsf" files.

See https://github.com/larson-group/sam_clubb/pull/139# and https://github.com/larson-group/sam_clubb/issues/138.
</comment><date>2021-07-01 14:26:12 -0500</date><id>381f3bdb88f44996263d03501401562e39717b25</id><msg>Removing a few lines from wangara_sounding.in to be consistent with SAM "snd" and "lsf" files.</msg><path><editType>edit</editType><file>input/case_setups/wangara_sounding.in</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>README</affectedPath><commitId>908d888d322c5197a6460260215e93bb0512f9d5</commitId><timestamp>1625234874000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Removing blank line to note that yesterday's changes to the Wangara sounding file was BIT_CHANGING.
</comment><date>2021-07-02 09:07:54 -0500</date><id>908d888d322c5197a6460260215e93bb0512f9d5</id><msg>Removing blank line to note that yesterday's changes to the Wangara sounding file was BIT_CHANGING.</msg><path><editType>edit</editType><file>README</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>postprocessing/pyplotgen/config/Case_definitions.py</affectedPath><commitId>cb5d4330ed62e494ddd1140fe046018df6377566</commitId><timestamp>1625239665000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephens</absoluteUrl><fullName>benjamin.andrew.stephens</fullName></author><authorEmail>benjamin.andrew.stephens@gmail.com</authorEmail><comment>Adding new SAM-LES WANGARA benchmark file to Pyplotgen.

See https://github.com/larson-group/sam_clubb/issues/138.
</comment><date>2021-07-02 10:27:45 -0500</date><id>cb5d4330ed62e494ddd1140fe046018df6377566</id><msg>Adding new SAM-LES WANGARA benchmark file to Pyplotgen.</msg><path><editType>edit</editType><file>postprocessing/pyplotgen/config/Case_definitions.py</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>utilities/sens_matrix/sens_matrix_dashboard.py</affectedPath><affectedPath>utilities/sens_matrix/analyze_sensitivity_matrix.py</affectedPath><commitId>b877d82325b1a893de74a7451e3cf88556ebd268</commitId><timestamp>1625582139000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/vlarson</absoluteUrl><fullName>Vince Larson</fullName></author><authorEmail>vlarson@uwm.edu</authorEmail><comment>Add to dashboard outputs related to observations.

For #910.
</comment><date>2021-07-06 09:35:39 -0500</date><id>b877d82325b1a893de74a7451e3cf88556ebd268</id><msg>Add to dashboard outputs related to observations.</msg><path><editType>edit</editType><file>utilities/sens_matrix/sens_matrix_dashboard.py</file></path><path><editType>edit</editType><file>utilities/sens_matrix/analyze_sensitivity_matrix.py</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><commitId>6b03a707a3fef05054ecf0d12aef562f683a45f6</commitId><timestamp>1625696754000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Improving error messages in setup_clubb_core. larson-group/e3sm#38
</comment><date>2021-07-07 17:25:54 -0500</date><id>6b03a707a3fef05054ecf0d12aef562f683a45f6</id><msg>Improving error messages in setup_clubb_core. larson-group/e3sm#38</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_restart_silhs_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_G_unit_gfortran_tests/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_bin_diff_regression_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_backwards_compatibility_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_fire_tuning_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_restart_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_restart_silhs_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_timestep_convergence_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_check_budget_balance/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_mac_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_G_unit_tests/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_uninit_var_oracle_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_openmp_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_silhs_convergence_gfortran/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_backwards_compatibility_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_check_budget_balance_gfortran/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_fire_tuning_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_timestep_convergence_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_silhs_convergence/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_error_handling_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_mac_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_restart_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_uninit_var_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_openmp_test/Jenkinsfile</affectedPath><commitId>8ce799103168bf057f9d54e067a4c18eea2628a6</commitId><timestamp>1625763865000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Changing if conditional statements to the name of the tests to ensure all features work as intended. larson-group/sys_admin#735
</comment><date>2021-07-08 12:04:25 -0500</date><id>8ce799103168bf057f9d54e067a4c18eea2628a6</id><msg>Changing if conditional statements to the name of the tests to ensure all features work as intended. larson-group/sys_admin#735</msg><path><editType>delete</editType><file>jenkins_tests/clubb_openmp_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_fire_tuning_gfortran_test/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_uninit_var_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_restart_silhs_gfortran_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_silhs_convergence_gfortran/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_silhs_convergence/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_mac_test/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_error_handling_test/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_fire_tuning_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_backwards_compatibility_gfortran_test/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_backwards_compatibility_test/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_timestep_convergence_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_uninit_var_oracle_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_mac_gfortran_test/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_restart_test/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_G_unit_tests/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_G_unit_gfortran_tests/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_check_budget_balance/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_restart_silhs_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_restart_gfortran_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_openmp_gfortran_test/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_bin_diff_regression_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_check_budget_balance_gfortran/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_timestep_convergence_gfortran_test/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfile</affectedPath><commitId>658573bb8e83bff9831e00992134865433d92d44</commitId><timestamp>1625837648000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Fixing error in clubb_error_handling_gfortran_test Jenkinsfile from previous commit to allow for the test to run.
</comment><date>2021-07-09 08:34:08 -0500</date><id>658573bb8e83bff9831e00992134865433d92d44</id><msg>Fixing error in clubb_error_handling_gfortran_test Jenkinsfile from previous commit to allow for the test to run.</msg><path><editType>edit</editType><file>jenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>postprocessing/pyplotgen/requirements.txt</affectedPath><commitId>12407142b14155687d0d80b174796965d2793b12</commitId><timestamp>1626121105000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Changing Pillow version number in requirements.txt to solve issue brought up by dependabot. larson-group/sys_admin#741
</comment><date>2021-07-12 15:18:25 -0500</date><id>12407142b14155687d0d80b174796965d2793b12</id><msg>Changing Pillow version number in requirements.txt to solve issue brought up by dependabot. larson-group/sys_admin#741</msg><path><editType>edit</editType><file>postprocessing/pyplotgen/requirements.txt</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp3_module.F90</affectedPath><affectedPath>src/G_unit_test_types/spurious_source_test.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/clip_explicit.F90</affectedPath><affectedPath>src/CLUBB_core/precipitation_fraction.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xm_wpxp_module.F90</affectedPath><affectedPath>src/microphys_driver.F90</affectedPath><affectedPath>src/CLUBB_core/advance_windm_edsclrm_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_sfc_module.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/advance_microphys_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/CLUBB_core/setup_clubb_pdf_params.F90</affectedPath><affectedPath>src/CLUBB_core/fill_holes.F90</affectedPath><affectedPath>src/CLUBB_core/mono_flux_limiter.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_helper_module.F90</affectedPath><commitId>5776f237f9093da79b6d73e31426eed6d546f826</commitId><timestamp>1626973646000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/72510114+rhodeskeegan</absoluteUrl><fullName>72510114+RhodesKeegan</fullName></author><authorEmail>72510114+RhodesKeegan@users.noreply.github.com</authorEmail><comment>Feeding stats variables through the argument lists of needed subroutines.
The purpose of this commit is to prep clubb for having all stats variables be
fed through the argument list in the entirety of clubb and host models where needed.
This is for ticket #733.
Results have been confirmed to be BFB identical.
</comment><date>2021-07-22 12:07:26 -0500</date><id>5776f237f9093da79b6d73e31426eed6d546f826</id><msg>Feeding stats variables through the argument lists of needed subroutines.</msg><path><editType>edit</editType><file>src/CLUBB_core/fill_holes.F90</file></path><path><editType>edit</editType><file>src/microphys_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_helper_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/G_unit_test_types/spurious_source_test.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clip_explicit.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/advance_microphys_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_sfc_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/precipitation_fraction.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xm_wpxp_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/clip_explicit.F90</affectedPath><affectedPath>src/CLUBB_core/precipitation_fraction.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xm_wpxp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_windm_edsclrm_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_sfc_module.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/CLUBB_core/setup_clubb_pdf_params.F90</affectedPath><affectedPath>src/CLUBB_core/fill_holes.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/mono_flux_limiter.F90</affectedPath><affectedPath>src/CLUBB_core/advance_helper_module.F90</affectedPath><commitId>5659a5e7a1c5b296e3b75462a4ea7b713cc3b81a</commitId><timestamp>1626973646000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/72510114+rhodeskeegan</absoluteUrl><fullName>72510114+RhodesKeegan</fullName></author><authorEmail>72510114+RhodesKeegan@users.noreply.github.com</authorEmail><comment>Fixing spacing issues along with placing the stats varibales on their own lines.
Additionally, this commit relabels arg list intent along with the intent of stats vars.
Stats variables are still not in the correct spot in the arg list as per the standard,
however, they are on their own line where they are correctly labeled.
For ticket #733.
Results are confirmed BFB identical.
</comment><date>2021-07-22 12:07:26 -0500</date><id>5659a5e7a1c5b296e3b75462a4ea7b713cc3b81a</id><msg>Fixing spacing issues along with placing the stats varibales on their own lines.</msg><path><editType>edit</editType><file>src/CLUBB_core/fill_holes.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clip_explicit.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_helper_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/precipitation_fraction.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_sfc_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/G_unit_test_types/spurious_source_test.F90</affectedPath><affectedPath>src/CLUBB_core/mixing_length.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xm_wpxp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_windm_edsclrm_module.F90</affectedPath><affectedPath>src/microphys_driver.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/advance_microphys_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/CLUBB_core/setup_clubb_pdf_params.F90</affectedPath><affectedPath>src/CLUBB_core/stats_lh_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/mono_flux_limiter.F90</affectedPath><affectedPath>src/CLUBB_core/stats_lh_sfc_module.F90</affectedPath><commitId>2450be63f0d03cfe2f866d4551f3bd1f675fa66c</commitId><timestamp>1626973646000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/72510114+rhodeskeegan</absoluteUrl><fullName>72510114+RhodesKeegan</fullName></author><authorEmail>72510114+RhodesKeegan@users.noreply.github.com</authorEmail><comment>Changing more subroutines to include stats vars in their arg lists.
There were a few subroutines that were not detected on the first script
for subroutines that would need to be changed. This commit picks up on
those subroutines and correctly makes the change.
Additionally, this commit also makes the stats vars show up in the same
spot consistantly throughout all affected subroutines.
For ticket #733.
Results are confirmed BFB identical.
</comment><date>2021-07-22 12:07:26 -0500</date><id>2450be63f0d03cfe2f866d4551f3bd1f675fa66c</id><msg>Changing more subroutines to include stats vars in their arg lists.</msg><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_lh_sfc_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mixing_length.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_lh_zt_module.F90</file></path><path><editType>edit</editType><file>src/G_unit_test_types/spurious_source_test.F90</file></path><path><editType>edit</editType><file>src/advance_microphys_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>src/microphys_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mono_flux_limiter.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><commitId>cfbd34dcc44080c9ae674e3a050c665935e30575</commitId><timestamp>1626973646000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/72510114+rhodeskeegan</absoluteUrl><fullName>72510114+RhodesKeegan</fullName></author><authorEmail>72510114+RhodesKeegan@users.noreply.github.com</authorEmail><comment>Fixing incorrect subroutine arg list
</comment><date>2021-07-22 12:07:26 -0500</date><id>cfbd34dcc44080c9ae674e3a050c665935e30575</id><msg>Fixing incorrect subroutine arg list</msg><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><commitId>914e5a0c8bf3456b3b45a4c430c5d62a1632a84c</commitId><timestamp>1626973646000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/72510114+rhodeskeegan</absoluteUrl><fullName>72510114+RhodesKeegan</fullName></author><authorEmail>72510114+RhodesKeegan@users.noreply.github.com</authorEmail><comment>Fixing host models not compiling.
Host models now compile.
For ticket #733
Results remain BFB identical.
</comment><date>2021-07-22 12:07:26 -0500</date><id>914e5a0c8bf3456b3b45a4c430c5d62a1632a84c</id><msg>Fixing host models not compiling.</msg><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/mixing_length.F90</affectedPath><affectedPath>src/CLUBB_core/advance_windm_edsclrm_module.F90</affectedPath><affectedPath>src/microphys_driver.F90</affectedPath><affectedPath>src/advance_microphys_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/CLUBB_core/mono_flux_limiter.F90</affectedPath><affectedPath>src/CLUBB_core/advance_helper_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_lh_sfc_module.F90</affectedPath><affectedPath>src/G_unit_test_types/spurious_source_test.F90</affectedPath><affectedPath>src/CLUBB_core/clip_explicit.F90</affectedPath><affectedPath>src/CLUBB_core/precipitation_fraction.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xm_wpxp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_sfc_module.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_lh_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/setup_clubb_pdf_params.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/fill_holes.F90</affectedPath><commitId>23323e4020d5fdd98345e43f7b86b2e384ca74a4</commitId><timestamp>1626973646000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/72510114+rhodeskeegan</absoluteUrl><fullName>72510114+RhodesKeegan</fullName></author><authorEmail>72510114+RhodesKeegan@users.noreply.github.com</authorEmail><comment>Fixing argument list so that way the coding standard is upheld.
For ticket #733.
Results remain BFB identical.
</comment><date>2021-07-22 12:07:26 -0500</date><id>23323e4020d5fdd98345e43f7b86b2e384ca74a4</id><msg>Fixing argument list so that way the coding standard is upheld.</msg><path><editType>edit</editType><file>src/advance_microphys_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zt_module.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/G_unit_test_types/spurious_source_test.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_lh_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_helper_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clip_explicit.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_lh_sfc_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/precipitation_fraction.F90</file></path><path><editType>edit</editType><file>src/microphys_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_sfc_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mixing_length.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/fill_holes.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp3_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>utilities/sens_matrix/sens_matrix_dashboard.py</affectedPath><affectedPath>utilities/sens_matrix/analyze_sensitivity_matrix.py</affectedPath><commitId>3320eef6119dda9298339d3187da21ed2bd61cc7</commitId><timestamp>1627050886000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/vlarson</absoluteUrl><fullName>Vince Larson</fullName></author><authorEmail>vlarson@uwm.edu</authorEmail><comment>Add new plots and calculations to dashboard.
These include a weighted bias ratio that tells us
how much the tuner's recommendation is expected to improve the fit.
It also includes an estimate of the overall sensitivity of each metric,
i.e., how "unbudgeable" the metric is.
It also automatically deletes the smallest singular values.
Finally, it includes an option to leave uninteresting metrics
at their default values, but this option is commented out for now.

For #910.
</comment><date>2021-07-23 09:34:46 -0500</date><id>3320eef6119dda9298339d3187da21ed2bd61cc7</id><msg>Add new plots and calculations to dashboard.</msg><path><editType>edit</editType><file>utilities/sens_matrix/sens_matrix_dashboard.py</file></path><path><editType>edit</editType><file>utilities/sens_matrix/analyze_sensitivity_matrix.py</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/new_hybrid_pdf_main.F90</affectedPath><commitId>a25fce6826447d187826f9be342b4344f8057c92</commitId><timestamp>1627072017000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I changed the name to calc_responder_driver because I thought that
calc_responder_var_lev (which it had recently been changed to) wasn't
very fitting.
</comment><date>2021-07-23 15:26:57 -0500</date><id>a25fce6826447d187826f9be342b4344f8057c92</id><msg>I changed the name to calc_responder_driver because I thought that</msg><path><editType>edit</editType><file>src/CLUBB_core/new_hybrid_pdf_main.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>postprocessing/pyplotgen/config/VariableGroupWs.py</affectedPath><affectedPath>input/stats/standard_stats.in</affectedPath><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>input_misc/tuner/error_atex.in</affectedPath><affectedPath>input_misc/tuner/error_rico.in</affectedPath><affectedPath>postprocessing/pyplotgen/config/VariableGroupBaseBudgets.py</affectedPath><affectedPath>src/CLUBB_core/pdf_closure_module.F90</affectedPath><affectedPath>input_misc/tuner/error_gabls3_night.in</affectedPath><affectedPath>input_misc/tuner/error_nov11_altocu.in</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf01.in</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_ds.in</affectedPath><affectedPath>input_misc/tuner/error_wangara.in</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>input/tunable_parameters_compatible_r8029/tunable_parameters.in</affectedPath><affectedPath>input/tunable_parameters/tunable_parameters.in</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_do.in</affectedPath><affectedPath>src/CLUBB_core/parameter_indices.F90</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_nd.in</affectedPath><affectedPath>input/tunable_parameters_e3sm/tunable_parameters.in</affectedPath><affectedPath>src/CLUBB_core/parameters_tunable.F90</affectedPath><affectedPath>input_misc/tuner/error_arm.in</affectedPath><affectedPath>input_misc/tuner/error_bomex.in</affectedPath><affectedPath>input/stats/all_stats.in</affectedPath><affectedPath>src/CLUBB_core/stats_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>input/tunable_parameters_Lscale/tunable_parameters.in</affectedPath><affectedPath>input_misc/tuner/error_arm_97.in</affectedPath><affectedPath>input_misc/tuner/error_all.in</affectedPath><affectedPath>input_misc/tuner/error_lba.in</affectedPath><affectedPath>src/CLUBB_core/stats_zt_module.F90</affectedPath><affectedPath>input_misc/tuner/error_fire.in</affectedPath><affectedPath>input_misc/tuner/error_gabls2.in</affectedPath><affectedPath>src/CLUBB_core/stats_variables.F90</affectedPath><affectedPath>input_misc/tuner/error_ticket_756.in</affectedPath><commitId>3f9d6b488948dea1e34d6a55f598b2c248be1cf6</commitId><timestamp>1627323773000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Code changes to introduce wp2_pr_dfsn, the wp2 pressure diffusion term, consistent with Lumley 1978.  Related to #920.

This is BIT_CHANGING, but only because it will introduce some new output variables in the netcdf files.  It will not affect results currently since the pressure diffusion coefficient is set to zero.
</comment><date>2021-07-26 13:22:53 -0500</date><id>3f9d6b488948dea1e34d6a55f598b2c248be1cf6</id><msg>Code changes to introduce wp2_pr_dfsn, the wp2 pressure diffusion term, consistent with Lumley 1978.  Related to #920.</msg><path><editType>edit</editType><file>input/stats/standard_stats.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/parameters_tunable.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_variables.F90</file></path><path><editType>edit</editType><file>input/tunable_parameters/tunable_parameters.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_arm.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_fire.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_lba.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_do.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_arm_97.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>input_misc/tuner/error_rico.in</file></path><path><editType>edit</editType><file>input/stats/all_stats.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/parameter_indices.F90</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf01.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_nd.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_gabls2.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_nov11_altocu.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>input_misc/tuner/error_ticket_756.in</file></path><path><editType>edit</editType><file>postprocessing/pyplotgen/config/VariableGroupBaseBudgets.py</file></path><path><editType>edit</editType><file>input_misc/tuner/error_wangara.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_all.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>input_misc/tuner/error_gabls3_night.in</file></path><path><editType>edit</editType><file>postprocessing/pyplotgen/config/VariableGroupWs.py</file></path><path><editType>edit</editType><file>src/CLUBB_core/pdf_closure_module.F90</file></path><path><editType>edit</editType><file>input/tunable_parameters_compatible_r8029/tunable_parameters.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_ds.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_atex.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zt_module.F90</file></path><path><editType>edit</editType><file>input_misc/tuner/error_bomex.in</file></path><path><editType>edit</editType><file>input/tunable_parameters_Lscale/tunable_parameters.in</file></path><path><editType>edit</editType><file>input/tunable_parameters_e3sm/tunable_parameters.in</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><commitId>6440a7c1a6a721aaae6065d5b58728216400fe35</commitId><timestamp>1627323773000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Fixing comment for the wp2_term_pr_dfsn subroutine.  Related to #920.
</comment><date>2021-07-26 13:22:53 -0500</date><id>6440a7c1a6a721aaae6065d5b58728216400fe35</id><msg>Fixing comment for the wp2_term_pr_dfsn subroutine.  Related to #920.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><commitId>e96cf0f26efec9551da1442b22822e3e555f81f9</commitId><timestamp>1627323773000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Updating wp3 pressure diffusion term to be consistent with the Lumley 1978 formula for the perturbation pressure. For #920.
</comment><date>2021-07-26 13:22:53 -0500</date><id>e96cf0f26efec9551da1442b22822e3e555f81f9</id><msg>Updating wp3 pressure diffusion term to be consistent with the Lumley 1978 formula for the perturbation pressure. For #920.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><commitId>de859baa5f8b7ba39cf0e079c3a4800bab5550f6</commitId><timestamp>1627323773000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Making requested changes to the wp2 pressure diffuion additions, including correcting some grid-level related issues.  Related to #920.
</comment><date>2021-07-26 13:22:53 -0500</date><id>de859baa5f8b7ba39cf0e079c3a4800bab5550f6</id><msg>Making requested changes to the wp2 pressure diffuion additions, including correcting some grid-level related issues.  Related to #920.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><commitId>fd3e80782f23dd6203d08784822c5a8fb7ef0833</commitId><timestamp>1627323773000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Fixing some comments.
</comment><date>2021-07-26 13:22:53 -0500</date><id>fd3e80782f23dd6203d08784822c5a8fb7ef0833</id><msg>Fixing some comments.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/pdf_closure_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zt_module.F90</affectedPath><commitId>e786f8cfb8d1c1b14fe33e167ea8c376ca2571e9</commitId><timestamp>1627331205000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephens</absoluteUrl><fullName>benjamin.andrew.stephens</fullName></author><authorEmail>benjamin.andrew.stephens@gmail.com</authorEmail><comment>Correcting a typo bug and adding some descriptive comments to two new variables.  This is a BIT_CHANGING commit becuase it will affect the newly calculated variables and descriptions in the output files, but it won't affect any plotted results. Related to #920.
</comment><date>2021-07-26 15:26:45 -0500</date><id>e786f8cfb8d1c1b14fe33e167ea8c376ca2571e9</id><msg>Correcting a typo bug and adding some descriptive comments to two new variables.  This is a BIT_CHANGING commit becuase it will affect the newly calculated variables and descriptions in the output files, but it won't affect any plotted results. Related to #920.</msg><path><editType>edit</editType><file>src/CLUBB_core/pdf_closure_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zt_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/G_unit_tests.F90</affectedPath><affectedPath>src/G_unit_test_types/spurious_source_test.F90</affectedPath><affectedPath>src/KK_microphys_module.F90</affectedPath><affectedPath>src/estimate_scm_microphys_module.F90</affectedPath><affectedPath>src/ice_dfsn_module.F90</affectedPath><affectedPath>src/SILHS/silhs_api_module.F90</affectedPath><affectedPath>src/lh_microphys_driver_module.F90</affectedPath><affectedPath>src/SILHS/latin_hypercube_driver_module.F90</affectedPath><affectedPath>src/mixed_moment_PDF_integrals.F90</affectedPath><affectedPath>src/soil_vegetation.F90</affectedPath><affectedPath>src/Benchmark_cases/cloud_sed_module.F90</affectedPath><affectedPath>src/microphys_driver.F90</affectedPath><affectedPath>src/simple_rad_module.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/silhs_category_variance_module.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/advance_microphys_module.F90</affectedPath><affectedPath>src/KK_microphys/KK_upscaled_turbulent_sed.F90</affectedPath><affectedPath>src/CLUBB_core/stats_variables.F90</affectedPath><affectedPath>src/KK_microphys/KK_upscaled_covariances.F90</affectedPath><affectedPath>src/coamps_microphys_driver_module.F90</affectedPath><commitId>2665cccdafdbf4b1e9c533b6bca94c6c66f9e52b</commitId><timestamp>1627409573000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/72510114+rhodeskeegan</absoluteUrl><fullName>72510114+RhodesKeegan</fullName></author><authorEmail>72510114+RhodesKeegan@users.noreply.github.com</authorEmail><comment>Moving the stats variables to module variables of clubb_driver.
This change means I had to modify clubb_api_module's arg list
along with other arg lists throughout clubb.
Everything compiles and results remain BFB identical.
For ticket #733.
</comment><date>2021-07-27 13:12:53 -0500</date><id>2665cccdafdbf4b1e9c533b6bca94c6c66f9e52b</id><msg>Moving the stats variables to module variables of clubb_driver.</msg><path><editType>edit</editType><file>src/G_unit_tests.F90</file></path><path><editType>edit</editType><file>src/lh_microphys_driver_module.F90</file></path><path><editType>edit</editType><file>src/simple_rad_module.F90</file></path><path><editType>edit</editType><file>src/SILHS/silhs_api_module.F90</file></path><path><editType>edit</editType><file>src/KK_microphys/KK_upscaled_turbulent_sed.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_variables.F90</file></path><path><editType>edit</editType><file>src/estimate_scm_microphys_module.F90</file></path><path><editType>edit</editType><file>src/microphys_driver.F90</file></path><path><editType>edit</editType><file>src/ice_dfsn_module.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/KK_microphys_module.F90</file></path><path><editType>edit</editType><file>src/soil_vegetation.F90</file></path><path><editType>edit</editType><file>src/KK_microphys/KK_upscaled_covariances.F90</file></path><path><editType>edit</editType><file>src/Benchmark_cases/cloud_sed_module.F90</file></path><path><editType>edit</editType><file>src/coamps_microphys_driver_module.F90</file></path><path><editType>edit</editType><file>src/G_unit_test_types/spurious_source_test.F90</file></path><path><editType>edit</editType><file>src/SILHS/latin_hypercube_driver_module.F90</file></path><path><editType>edit</editType><file>src/mixed_moment_PDF_integrals.F90</file></path><path><editType>edit</editType><file>src/silhs_category_variance_module.F90</file></path><path><editType>edit</editType><file>src/advance_microphys_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/clubb_driver.F90</affectedPath><commitId>e86770309bd6a540c229c97071bdf932c812b734</commitId><timestamp>1627409573000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/72510114+rhodeskeegan</absoluteUrl><fullName>72510114+RhodesKeegan</fullName></author><authorEmail>72510114+RhodesKeegan@users.noreply.github.com</authorEmail><comment>Fixing missing comment
</comment><date>2021-07-27 13:12:53 -0500</date><id>e86770309bd6a540c229c97071bdf932c812b734</id><msg>Fixing missing comment</msg><path><editType>edit</editType><file>src/clubb_driver.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile</affectedPath><commitId>524d1f7a24735e24e6001949189f0c5a0816d4c6</commitId><timestamp>1627421525000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Adding new Jenkinsfile for new bit diff test for clubb. larson-group/e3sm#38
</comment><date>2021-07-27 16:32:05 -0500</date><id>524d1f7a24735e24e6001949189f0c5a0816d4c6</id><msg>Adding new Jenkinsfile for new bit diff test for clubb. larson-group/e3sm#38</msg><path><editType>edit</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</affectedPath><commitId>6da417868b2118bd1ab43617e85a4785b58c7529</commitId><timestamp>1627421650000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Making Jenkinsfile not a directory... larson-group/e3sm#38
</comment><date>2021-07-27 16:34:10 -0500</date><id>6da417868b2118bd1ab43617e85a4785b58c7529</id><msg>Making Jenkinsfile not a directory... larson-group/e3sm#38</msg><path><editType>add</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</affectedPath><commitId>92d538a1595070dde97520cc16eabb23d14567e3</commitId><timestamp>1627424191000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Changing job name in jenkins file. larson-group/e3sm#38
</comment><date>2021-07-27 17:16:31 -0500</date><id>92d538a1595070dde97520cc16eabb23d14567e3</id><msg>Changing job name in jenkins file. larson-group/e3sm#38</msg><path><editType>edit</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile</affectedPath><commitId>e49cd5f3a7c6b9b7dabb13dc9e199d588634985c</commitId><timestamp>1627499720000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Reverting accidental change to Jenkinsfile. larson-group/e3sm#38
</comment><date>2021-07-28 14:15:20 -0500</date><id>e49cd5f3a7c6b9b7dabb13dc9e199d588634985c</id><msg>Reverting accidental change to Jenkinsfile. larson-group/e3sm#38</msg><path><editType>edit</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</affectedPath><commitId>9c5247b051c13d31c7745fb484f63898e07da5eb</commitId><timestamp>1627500402000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Updating new Jenkinsfile. larson-group/e3sm#38
</comment><date>2021-07-28 14:26:42 -0500</date><id>9c5247b051c13d31c7745fb484f63898e07da5eb</id><msg>Updating new Jenkinsfile. larson-group/e3sm#38</msg><path><editType>edit</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</affectedPath><commitId>011c5887aea0f3f5e201866cf0b44b9e91599b66</commitId><timestamp>1627501604000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Updating Jenkinsfile because sys_admin files changed names.
</comment><date>2021-07-28 14:46:44 -0500</date><id>011c5887aea0f3f5e201866cf0b44b9e91599b66</id><msg>Updating Jenkinsfile because sys_admin files changed names.</msg><path><editType>edit</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>utilities/api_analysis/create_module_table.py</affectedPath><affectedPath>utilities/api_analysis/log/apiCommitmentTable.txt</affectedPath><affectedPath>utilities/api_analysis/log/usageAnalyzerTable.txt</affectedPath><affectedPath>utilities/api_analysis/usage_analyzer.py</affectedPath><affectedPath>utilities/api_analysis/run_full_api_diagnostics.bash</affectedPath><commitId>228f3ae7e30f0079c22bfaff5e245e63806be9c6</commitId><timestamp>1627566993000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Modifying run_full_api_diagnostics.bash, create_module_table.py, and usage_analyzer.py to create and save tables similar to the nightly tests. larson-group/sys_admin#749
</comment><date>2021-07-29 08:56:33 -0500</date><id>228f3ae7e30f0079c22bfaff5e245e63806be9c6</id><msg>Modifying run_full_api_diagnostics.bash, create_module_table.py, and usage_analyzer.py to create and save tables similar to the nightly tests. larson-group/sys_admin#749</msg><path><editType>add</editType><file>utilities/api_analysis/log/usageAnalyzerTable.txt</file></path><path><editType>add</editType><file>utilities/api_analysis/log/apiCommitmentTable.txt</file></path><path><editType>edit</editType><file>utilities/api_analysis/usage_analyzer.py</file></path><path><editType>edit</editType><file>utilities/api_analysis/create_module_table.py</file></path><path><editType>edit</editType><file>utilities/api_analysis/run_full_api_diagnostics.bash</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_api_commitment_test/Jenkinsfile</affectedPath><commitId>05678fbb8f2a39f46712194cd5ec54f9538e2c38</commitId><timestamp>1627567516000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Modigying jenkins test to display tables after test run. larson-group/sys_admin#749
</comment><date>2021-07-29 09:05:16 -0500</date><id>05678fbb8f2a39f46712194cd5ec54f9538e2c38</id><msg>Modigying jenkins test to display tables after test run. larson-group/sys_admin#749</msg><path><editType>edit</editType><file>jenkins_tests/clubb_api_commitment_test/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><affectedPath>src/SILHS/silhs_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/setup_clubb_pdf_params.F90</affectedPath><commitId>2c846a5185a386c1e500c828c95f6a4a8932150a</commitId><timestamp>1627569049000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Fixing coding standard viloation of lines exceeding 100 characters.
Violations were introduced as a result of changes made by ticket #733,
this commit resolves the coding standard violations.
Results BFB identical.
</comment><date>2021-07-29 09:30:49 -0500</date><id>2c846a5185a386c1e500c828c95f6a4a8932150a</id><msg>Fixing coding standard viloation of lines exceeding 100 characters.</msg><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/SILHS/silhs_api_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/setup_clubb_pdf_params.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>input/stats/standard_stats.in</affectedPath><affectedPath>input_misc/tuner/error_atex.in</affectedPath><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>input_misc/tuner/error_rico.in</affectedPath><affectedPath>postprocessing/pyplotgen/config/VariableGroupBaseBudgets.py</affectedPath><affectedPath>input_misc/tuner/error_gabls3_night.in</affectedPath><affectedPath>input_misc/tuner/error_nov11_altocu.in</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf01.in</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_ds.in</affectedPath><affectedPath>input_misc/tuner/error_wangara.in</affectedPath><affectedPath>input/tunable_parameters_compatible_r8029/tunable_parameters.in</affectedPath><affectedPath>input/tunable_parameters/tunable_parameters.in</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_do.in</affectedPath><affectedPath>src/CLUBB_core/parameter_indices.F90</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_nd.in</affectedPath><affectedPath>input/tunable_parameters_e3sm/tunable_parameters.in</affectedPath><affectedPath>src/CLUBB_core/parameters_tunable.F90</affectedPath><affectedPath>input_misc/tuner/error_arm.in</affectedPath><affectedPath>input_misc/tuner/error_bomex.in</affectedPath><affectedPath>input/stats/all_stats.in</affectedPath><affectedPath>input/tunable_parameters_Lscale/tunable_parameters.in</affectedPath><affectedPath>input_misc/tuner/error_arm_97.in</affectedPath><affectedPath>input_misc/tuner/error_all.in</affectedPath><affectedPath>input_misc/tuner/error_lba.in</affectedPath><affectedPath>src/CLUBB_core/stats_zt_module.F90</affectedPath><affectedPath>input_misc/tuner/error_fire.in</affectedPath><affectedPath>input_misc/tuner/error_gabls2.in</affectedPath><affectedPath>src/CLUBB_core/stats_variables.F90</affectedPath><affectedPath>input_misc/tuner/error_ticket_756.in</affectedPath><commitId>9e4a950550aac99cbf8fe1dfe2820a4d1f45b277</commitId><timestamp>1627579701000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Adding wp3_pr_tp (aka "negative nose" term) to wp3 equation.  Related to #920.

This is not set up to change results currently, since the coefficient of the new term is zero, but it is BIT_CHANGING since it will include new output in the netcdf files.

Also includes updates to pyplotgen to accommodate the new term.
</comment><date>2021-07-29 12:28:21 -0500</date><id>9e4a950550aac99cbf8fe1dfe2820a4d1f45b277</id><msg>Adding wp3_pr_tp (aka "negative nose" term) to wp3 equation.  Related to #920.</msg><path><editType>edit</editType><file>input_misc/tuner/error_gabls2.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_gabls3_night.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_variables.F90</file></path><path><editType>edit</editType><file>input/tunable_parameters_e3sm/tunable_parameters.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/parameters_tunable.F90</file></path><path><editType>edit</editType><file>input_misc/tuner/error_bomex.in</file></path><path><editType>edit</editType><file>input/tunable_parameters_Lscale/tunable_parameters.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf01.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_rico.in</file></path><path><editType>edit</editType><file>postprocessing/pyplotgen/config/VariableGroupBaseBudgets.py</file></path><path><editType>edit</editType><file>input_misc/tuner/error_ticket_756.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_arm_97.in</file></path><path><editType>edit</editType><file>input/stats/all_stats.in</file></path><path><editType>edit</editType><file>input/stats/standard_stats.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/parameter_indices.F90</file></path><path><editType>edit</editType><file>input_misc/tuner/error_all.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_lba.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_nd.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_ds.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_arm.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_atex.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_do.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_wangara.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_fire.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_nov11_altocu.in</file></path><path><editType>edit</editType><file>input/tunable_parameters_compatible_r8029/tunable_parameters.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zt_module.F90</file></path><path><editType>edit</editType><file>input/tunable_parameters/tunable_parameters.in</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/stats_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/parameters_tunable.F90</affectedPath><commitId>fa20b10387fb5dc6a45800fa7eb63b972bc4070f</commitId><timestamp>1627579701000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Changing the way the new wp3_pr_tp term works, by generalizing the wp3_terp_pr_lhs subroutine.  Also cleaning up comments and changing the description of the wp3_pr_tp variable in the netcdf output files, hence this commit is BIT_CHANGING, although it will not affect numerical results since the wp3_pr_tp coefficient (C_wp3_pr_tp) is set to zero.

Related to #920.
</comment><date>2021-07-29 12:28:21 -0500</date><id>fa20b10387fb5dc6a45800fa7eb63b972bc4070f</id><msg>Changing the way the new wp3_pr_tp term works, by generalizing the wp3_terp_pr_lhs subroutine.  Also cleaning up comments and changing the description of the wp3_pr_tp variable in the netcdf output files, hence this commit is BIT_CHANGING, although it will not affect numerical results since the wp3_pr_tp coefficient (C_wp3_pr_tp) is set to zero.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/parameters_tunable.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>postprocessing/pyplotgen/config/VariableGroupBaseBudgetsSamStyle.py</affectedPath><commitId>be8c34c191362f97866647c2fc8674a71456d314</commitId><timestamp>1627584545000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/benjamin.andrew.stephens</absoluteUrl><fullName>benjamin.andrew.stephens</fullName></author><authorEmail>benjamin.andrew.stephens@gmail.com</authorEmail><comment>Adding the new pressure-related terms, wp2_pr_dfsn and wp3_pr_tp, to the --sam-style-budgets option in Pyplotgen.

Related to #920.
</comment><date>2021-07-29 13:49:05 -0500</date><id>be8c34c191362f97866647c2fc8674a71456d314</id><msg>Adding the new pressure-related terms, wp2_pr_dfsn and wp3_pr_tp, to the --sam-style-budgets option in Pyplotgen.</msg><path><editType>edit</editType><file>postprocessing/pyplotgen/config/VariableGroupBaseBudgetsSamStyle.py</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/setup_clubb_pdf_params.F90</affectedPath><commitId>d42ffb89782f2cf38bb52c5236beb5fd39599598</commitId><timestamp>1627654958000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Removing l_interp_prescribed_params from setup_clubb_pdf_params.
The flag has been removed and so has any code underneat a logic statement
involving this statement unless it has multiple flags. The else statement
in the if block involving this flag has been set to execute without an
if block.
For ticket #916
Results are BFB identical. Additionally, complex logic statements
with the use of more flags had those flags adjusted and BFB results
were also confirmed with these changes.
</comment><date>2021-07-30 09:22:38 -0500</date><id>d42ffb89782f2cf38bb52c5236beb5fd39599598</id><msg>Removing l_interp_prescribed_params from setup_clubb_pdf_params.</msg><path><editType>edit</editType><file>src/CLUBB_core/setup_clubb_pdf_params.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>run_scripts/run_timestep_tests.bash</affectedPath><commitId>70e26ca1acd06149d3b7b996235769e5e0509c39</commitId><timestamp>1627656249000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Modifying run_timestep_tests.bash to run only 10 minute and above timesteps and exit immediately if the 10 mintue timestep fails. larson-group/sys_admin#749
</comment><date>2021-07-30 09:44:09 -0500</date><id>70e26ca1acd06149d3b7b996235769e5e0509c39</id><msg>Modifying run_timestep_tests.bash to run only 10 minute and above timesteps and exit immediately if the 10 mintue timestep fails. larson-group/sys_admin#749</msg><path><editType>edit</editType><file>run_scripts/run_timestep_tests.bash</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_timestep_gfortran_tests/Jenkinsfile</affectedPath><commitId>c07e805a7cea2e8ef0d7e1bc7506dde99b08e029</commitId><timestamp>1627656249000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Adding new timestep test to clubb jenkins tests. larson-group/sys_admin#749
</comment><date>2021-07-30 09:44:09 -0500</date><id>c07e805a7cea2e8ef0d7e1bc7506dde99b08e029</id><msg>Adding new timestep test to clubb jenkins tests. larson-group/sys_admin#749</msg><path><editType>add</editType><file>jenkins_tests/clubb_timestep_gfortran_tests/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>run_scripts/run_scm_all.bash</affectedPath><commitId>c00a83f64b5a5b675858f71463a3cc48547e9dc1</commitId><timestamp>1627659244000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Fixing false printing of "All cases ran to completion."
</comment><date>2021-07-30 10:34:04 -0500</date><id>c00a83f64b5a5b675858f71463a3cc48547e9dc1</id><msg>Fixing false printing of "All cases ran to completion."</msg><path><editType>edit</editType><file>run_scripts/run_scm_all.bash</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>input_misc/tuner/error_arm.in</affectedPath><affectedPath>input_misc/tuner/error_atex.in</affectedPath><affectedPath>input_misc/tuner/error_rico.in</affectedPath><affectedPath>input_misc/tuner/error_gabls3_night.in</affectedPath><affectedPath>input_misc/tuner/error_bomex.in</affectedPath><affectedPath>input_misc/tuner/error_nov11_altocu.in</affectedPath><affectedPath>src/clubb_tuner.F90</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_ds.in</affectedPath><affectedPath>input_misc/tuner/error_all.in</affectedPath><affectedPath>input_misc/tuner/error_wangara.in</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_do.in</affectedPath><affectedPath>input_misc/tuner/error_gabls2.in</affectedPath><affectedPath>input_misc/tuner/error_dycoms2_rf02_nd.in</affectedPath><affectedPath>input_misc/tuner/error_ticket_756.in</affectedPath><commitId>cdc1c0ff327d2514e6a192f680f0557eb9d5775b</commitId><timestamp>1627663201000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Updating clubb_tuner.F90 to resolve an issue where the optimized tunable_parameter_*.in file was not being created by default.  Now it will always be created when the tuner is run, as it should be.

Also updating a number of input_misc/tuner/error_*.in tuner setup files to ensure that C1 is not tuned by default.  If C1 is tuned but C14 is fixed, this causes CLUBB to crash since it requires C1=C14.

See #939.
</comment><date>2021-07-30 11:40:01 -0500</date><id>cdc1c0ff327d2514e6a192f680f0557eb9d5775b</id><msg>Updating clubb_tuner.F90 to resolve an issue where the optimized tunable_parameter_*.in file was not being created by default.  Now it will always be created when the tuner is run, as it should be.</msg><path><editType>edit</editType><file>input_misc/tuner/error_arm.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_gabls3_night.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_wangara.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_all.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_atex.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_gabls2.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_nd.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_ticket_756.in</file></path><path><editType>edit</editType><file>src/clubb_tuner.F90</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_ds.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_dycoms2_rf02_do.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_bomex.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_nov11_altocu.in</file></path><path><editType>edit</editType><file>input_misc/tuner/error_rico.in</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/clubb_tuner.F90</affectedPath><commitId>a6feee394218a885e95e99d8d03ac92a930275cd</commitId><timestamp>1627663201000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Updating wording
</comment><date>2021-07-30 11:40:01 -0500</date><id>a6feee394218a885e95e99d8d03ac92a930275cd</id><msg>Updating wording</msg><path><editType>edit</editType><file>src/clubb_tuner.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>compile/config/linux_x86_64_pgroup_debug_NCAR.bash</affectedPath><affectedPath>compile/config/linux_x86_64_pgroup.bash</affectedPath><commitId>c75c501143b4c6f91baef247e9eac49d4bd66375</commitId><timestamp>1627666319000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Adding in the Mstandard flag to the pgi compiler settings.
For ticket #928.
Results are BFB identical.
</comment><date>2021-07-30 12:31:59 -0500</date><id>c75c501143b4c6f91baef247e9eac49d4bd66375</id><msg>Adding in the Mstandard flag to the pgi compiler settings.</msg><path><editType>edit</editType><file>compile/config/linux_x86_64_pgroup.bash</file></path><path><editType>edit</editType><file>compile/config/linux_x86_64_pgroup_debug_NCAR.bash</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>postprocessing/pyplotgen/README.md</affectedPath><affectedPath>postprocessing/pyplotgen/pyplotgen.py</affectedPath><commitId>b19fddfe97ffca638b32ad37441e6ce75153c2bc</commitId><timestamp>1627666702000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Updating pyplotgen.py and README to clarify file name mismatch error and how to resolve it.

See #895.
</comment><date>2021-07-30 12:38:22 -0500</date><id>b19fddfe97ffca638b32ad37441e6ce75153c2bc</id><msg>Updating pyplotgen.py and README to clarify file name mismatch error and how to resolve it.</msg><path><editType>edit</editType><file>postprocessing/pyplotgen/pyplotgen.py</file></path><path><editType>edit</editType><file>postprocessing/pyplotgen/README.md</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>postprocessing/pyplotgen/README.md</affectedPath><commitId>9a6b7d72b96d350526e54ec0af848c3858c054cc</commitId><timestamp>1627666702000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Fixing typo.
</comment><date>2021-07-30 12:38:22 -0500</date><id>9a6b7d72b96d350526e54ec0af848c3858c054cc</id><msg>Fixing typo.</msg><path><editType>edit</editType><file>postprocessing/pyplotgen/README.md</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>postprocessing/pyplotgen/README.md</affectedPath><commitId>6d8db4b7452280cc1a2a0d29c7458c44f0826b17</commitId><timestamp>1627666702000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Clarifying README.
</comment><date>2021-07-30 12:38:22 -0500</date><id>6d8db4b7452280cc1a2a0d29c7458c44f0826b17</id><msg>Clarifying README.</msg><path><editType>edit</editType><file>postprocessing/pyplotgen/README.md</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>postprocessing/pyplotgen/pyplotgen.py</affectedPath><commitId>f5e75e3ca1940ef435c2ecd45683d3760ec8a36d</commitId><timestamp>1627666702000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Placing line breaks in the new error message and minor wording updates.

See #895.
</comment><date>2021-07-30 12:38:22 -0500</date><id>f5e75e3ca1940ef435c2ecd45683d3760ec8a36d</id><msg>Placing line breaks in the new error message and minor wording updates.</msg><path><editType>edit</editType><file>postprocessing/pyplotgen/pyplotgen.py</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/interpolation.F90</affectedPath><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/grid_class.F90</affectedPath><affectedPath>src/CLUBB_core/pdf_closure_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/input_reader.F90</affectedPath><affectedPath>src/CLUBB_core/adg1_adg2_3d_luhar_pdf.F90</affectedPath><affectedPath>src/CLUBB_core/pdf_parameter_module.F90</affectedPath><affectedPath>src/CLUBB_core/sfc_varnce_module.F90</affectedPath><affectedPath>src/CLUBB_core/sponge_layer_damping.F90</affectedPath><affectedPath>src/CLUBB_core/mixing_length.F90</affectedPath><affectedPath>src/CLUBB_core/output_netcdf.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/CLUBB_core/file_functions.F90</affectedPath><affectedPath>src/CLUBB_core/mono_flux_limiter.F90</affectedPath><affectedPath>src/CLUBB_core/clip_semi_implicit.F90</affectedPath><affectedPath>src/CLUBB_core/output_grads.F90</affectedPath><affectedPath>src/CLUBB_core/matrix_operations.F90</affectedPath><affectedPath>src/CLUBB_core/mt95.f90</affectedPath><affectedPath>src/CLUBB_core/parameters_tunable.F90</affectedPath><affectedPath>src/CLUBB_core/clip_explicit.F90</affectedPath><affectedPath>src/CLUBB_core/numerical_check.F90</affectedPath><affectedPath>src/CLUBB_core/precipitation_fraction.F90</affectedPath><affectedPath>src/CLUBB_core/code_timer_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/corr_varnce_module.F90</affectedPath><affectedPath>src/CLUBB_core/setup_clubb_pdf_params.F90</affectedPath><affectedPath>src/CLUBB_core/stats_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/calendar.F90</affectedPath><affectedPath>src/CLUBB_core/fill_holes.F90</affectedPath><affectedPath>src/CLUBB_core/diagnose_correlations_module.F90</affectedPath><commitId>67dc7892f77f7b81f62460a0747540ea5b2afff6</commitId><timestamp>1627927021000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Adding comments labeling subroutine calls with intent.
Goes all the way up until stats_clubb_utils.
BFB identical.
For ticket #942.
</comment><date>2021-08-02 12:57:01 -0500</date><id>67dc7892f77f7b81f62460a0747540ea5b2afff6</id><msg>Adding comments labeling subroutine calls with intent.</msg><path><editType>edit</editType><file>src/CLUBB_core/sponge_layer_damping.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/grid_class.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clip_explicit.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/output_netcdf.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/pdf_parameter_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/input_reader.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/interpolation.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mt95.f90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/sfc_varnce_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/parameters_tunable.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/matrix_operations.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/pdf_closure_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/code_timer_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/corr_varnce_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/file_functions.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clip_semi_implicit.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/diagnose_correlations_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/adg1_adg2_3d_luhar_pdf.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/calendar.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mixing_length.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/output_grads.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/fill_holes.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp3_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/numerical_check.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/precipitation_fraction.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_zm_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_backwards_compatibility_gfortran_test/Jenkinsfile</affectedPath><commitId>1abe50bfdb1ad4785d9d31c0d6fd81322786eaec</commitId><timestamp>1627930778000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Removing dependency on /home/pub and moving it to /home/jenkins larson-group/sys_admin#735
</comment><date>2021-08-02 13:59:38 -0500</date><id>1abe50bfdb1ad4785d9d31c0d6fd81322786eaec</id><msg>Removing dependency on /home/pub and moving it to /home/jenkins larson-group/sys_admin#735</msg><path><editType>edit</editType><file>jenkins_tests/clubb_backwards_compatibility_gfortran_test/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/input_netcdf.F90</affectedPath><commitId>369b0fe36f1976abca3b610d83667976b8d29e2d</commitId><timestamp>1628008404000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Adding some new, but still simple, parsing capabilities to input_netcdf.F90 so that the tuner will not crash if netcdf dates are in a slightly different format.  Now, instead of assuming the format of the string, the code will search for the positions of the two hyphens and the two colons and get the date and time based on that.

See #939.
</comment><date>2021-08-03 11:33:24 -0500</date><id>369b0fe36f1976abca3b610d83667976b8d29e2d</id><msg>Adding some new, but still simple, parsing capabilities to input_netcdf.F90 so that the tuner will not crash if netcdf dates are in a slightly different format.  Now, instead of assuming the format of the string, the code will search for the positions of the two hyphens and the two colons and get the date and time based on that.</msg><path><editType>edit</editType><file>src/input_netcdf.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/input_netcdf.F90</affectedPath><commitId>a5038964a04545a5bbbfaac75b47cab8df300976</commitId><timestamp>1628008404000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Adding some spaces to make the code a little nicer.
</comment><date>2021-08-03 11:33:24 -0500</date><id>a5038964a04545a5bbbfaac75b47cab8df300976</id><msg>Adding some spaces to make the code a little nicer.</msg><path><editType>edit</editType><file>src/input_netcdf.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/input_netcdf.F90</affectedPath><commitId>1120328123410505cc739035550da5129b6d0177</commitId><timestamp>1628008404000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Adding comments and renaming variables per Vince's comments.  Some minor cleaning.

See #939 and #943.
</comment><date>2021-08-03 11:33:24 -0500</date><id>1120328123410505cc739035550da5129b6d0177</id><msg>Adding comments and renaming variables per Vince's comments.  Some minor cleaning.</msg><path><editType>edit</editType><file>src/input_netcdf.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/output_grads.F90</affectedPath><affectedPath>src/CLUBB_core/output_netcdf.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zm_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/CLUBB_core/stats_rad_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_lh_zt_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_lh_sfc_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_type_utilities.F90</affectedPath><commitId>5e293e158a4e51e45b8caf7941bb7cb83645c593</commitId><timestamp>1628008649000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Adding intent labels for subroutines throughout clubb.
All calls to subroutines now have intent comments next to them
all the way up through stats_sfc_module.
Results are BFB identical.
For ticket #942.
</comment><date>2021-08-03 11:37:29 -0500</date><id>5e293e158a4e51e45b8caf7941bb7cb83645c593</id><msg>Adding intent labels for subroutines throughout clubb.</msg><path><editType>edit</editType><file>src/CLUBB_core/output_netcdf.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_rad_zt_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/output_grads.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_lh_sfc_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_type_utilities.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_lh_zt_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><commitId>885de7cfc91b540f1ff784ceb80e124b3f20e6a2</commitId><timestamp>1628009021000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Removing unnecessary constant from use statement
</comment><date>2021-08-03 11:43:41 -0500</date><id>885de7cfc91b540f1ff784ceb80e124b3f20e6a2</id><msg>Removing unnecessary constant from use statement</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/error.F90</affectedPath><commitId>f6a2c0fcea331c8ba1d980d678453e4ae6fafcd7</commitId><timestamp>1628081814000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/59519056+bstephens82</absoluteUrl><fullName>59519056+bstephens82</fullName></author><authorEmail>59519056+bstephens82@users.noreply.github.com</authorEmail><comment>Updates to help run multiple tuner cases. The date/time assertion check in error.F90 was not working correctly for multiple cases, since instead of updating the CLUBB date/time based on the case, it was just using one CLUBB case for all LES cases and crashing.

See #939.
</comment><date>2021-08-04 07:56:54 -0500</date><id>f6a2c0fcea331c8ba1d980d678453e4ae6fafcd7</id><msg>Updates to help run multiple tuner cases. The date/time assertion check in error.F90 was not working correctly for multiple cases, since instead of updating the CLUBB date/time based on the case, it was just using one CLUBB case for all LES cases and crashing.</msg><path><editType>edit</editType><file>src/error.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/clubb_tuner.F90</affectedPath><commitId>2c9bdf2f62a86ceb7be6912a3708578fc61ff015</commitId><timestamp>1628091885000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Fix typo
</comment><date>2021-08-04 10:44:45 -0500</date><id>2c9bdf2f62a86ceb7be6912a3708578fc61ff015</id><msg>Fix typo</msg><path><editType>edit</editType><file>src/clubb_tuner.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>README</affectedPath><commitId>c3513bf16ee2b5282ca5be687fba810ed54c62d3</commitId><timestamp>1628534188000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Include comment about current tuner compiler issue
</comment><date>2021-08-09 13:36:28 -0500</date><id>c3513bf16ee2b5282ca5be687fba810ed54c62d3</id><msg>Include comment about current tuner compiler issue</msg><path><editType>edit</editType><file>README</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>utilities/sens_matrix/analyze_sensitivity_matrix.py</affectedPath><affectedPath>utilities/sens_matrix/sens_matrix_dashboard.py</affectedPath><commitId>735794b554b9bb06a4032f69d74114b2a7a43af6</commitId><timestamp>1628608528000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/vlarson</absoluteUrl><fullName>Vince Larson</fullName></author><authorEmail>vlarson@uwm.edu</authorEmail><comment>Attempt to add error bars to the metrics predictions
by the tuner dashboard.  However, I'm not sure if
it's correct to use mean-sigma values for all parameters.
I also need to add shading of error bounds.

For #910.
</comment><date>2021-08-10 10:15:28 -0500</date><id>735794b554b9bb06a4032f69d74114b2a7a43af6</id><msg>Attempt to add error bars to the metrics predictions</msg><path><editType>edit</editType><file>utilities/sens_matrix/analyze_sensitivity_matrix.py</file></path><path><editType>edit</editType><file>utilities/sens_matrix/sens_matrix_dashboard.py</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/parameters_tunable.F90</affectedPath><commitId>404e28e9ae4fbbcff003077a7504b8d9bd3dfb19</commitId><timestamp>1628617949000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Eliminating l_nu_grid_dependent as requested.
For ticket #926.
Results are BFB identical.
</comment><date>2021-08-10 12:52:29 -0500</date><id>404e28e9ae4fbbcff003077a7504b8d9bd3dfb19</id><msg>Eliminating l_nu_grid_dependent as requested.</msg><path><editType>edit</editType><file>src/CLUBB_core/parameters_tunable.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/parameters_tunable.F90</affectedPath><commitId>709d54dcdefda256b038718de61f2ae938b016d6</commitId><timestamp>1628620641000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Eliminating l_use_buoy_mod_Km_zm.
For ticket #926
if we use a buoyancy-modified expression for Km_zm.
Results are BFB identical.
</comment><date>2021-08-10 13:37:21 -0500</date><id>709d54dcdefda256b038718de61f2ae938b016d6</id><msg>Eliminating l_use_buoy_mod_Km_zm.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/parameters_tunable.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><commitId>37847d5f054f506e943df5de16f609fc7beeafa5</commitId><timestamp>1628624038000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/rhodesk</absoluteUrl><fullName>rhodesk</fullName></author><authorEmail>rhodesk@msoe.edu</authorEmail><comment>Eliminating l_iter_xp2_xpyp flag.
For ticket #926.
Results are BFB identical.
</comment><date>2021-08-10 14:33:58 -0500</date><id>37847d5f054f506e943df5de16f609fc7beeafa5</id><msg>Eliminating l_iter_xp2_xpyp flag.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_release_intel_build/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_ifort_build/Jenkinsfile</affectedPath><commitId>e167731fde5874588758b751cb80764ecf9ed9c0</commitId><timestamp>1628700826000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Changing ifort environment variable file to new ifort file. larson-group/sys_admin#750
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