+ python run_scripts/set_up_repo.py .
Checking out externals...
Sparse checkout cam-sima fxsparse ../.sima_phys_utils_sparse_checkout
Successfully checked out cam-sima at sima0_07_000
cam-sima up to date.
Sparse checkout mpas fxsparse ../.mpas_sparse_checkout
Successfully checked out mpas at v8.4.0
mpas up to date.
Sparse checkout cosp2 fxsparse ../.cosp_sparse_checkout
Successfully checked out cosp2 at v2.2.1
cosp2 up to date.
Sparse checkout ext_co2_cooling fxsparse ../.ext_co2_cooling_sparse_checkout
Successfully checked out ext_co2_cooling at v1.1
ext_co2_cooling up to date.
chem_proc up to date.
carma up to date.
pumas-frozen up to date.
ali_arms up to date.
atmos_phys up to date.
Recursively checking out submodules of atmos_phys
fv3 up to date.
Recursively checking out submodules of fv3
cloud_j up to date.
hetp up to date.
hemco up to date.
Recursively checking out submodules of hemco
rrtmgp-data up to date.
rtm up to date.
mosart up to date.
ccs_config up to date.
fms up to date.
Recursively checking out submodules of fms
cdeps up to date.
Recursively checking out submodules of cdeps
share up to date.
tools/CUPiD up to date.
Recursively checking out submodules of tools/CUPiD
cmeps up to date.
parallelio up to date.
geoschem up to date.
Recursively checking out submodules of geoschem
mizuRoute up to date.
Recursively checking out submodules of mizuRoute
cice up to date.
Recursively checking out submodules of cice
tuv-x up to date.
Recursively checking out submodules of HEMCO
clm up to date.
Recursively checking out submodules of clm
cime up to date.
Recursively checking out submodules of cime
Recursively checking out submodules of fates
Recursively checking out submodules of src
Copying ccs_config files
Restricting NVHPC OpenACC rules to CLUBB
Applying CAM-SIMA Filepath workaround
