Started by user Peter Roels
Checking out git https://github.com/larson-group/e3sm.git into /home/jenkins/workspace/branch_e3sm_test@script to read jenkins_tests/e3sm_run_gfortran_test/Jenkinsfile
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/e3sm.git
> git init /home/jenkins/workspace/branch_e3sm_test@script # timeout=10
Fetching upstream changes from https://github.com/larson-group/e3sm.git
> git --version # timeout=10
> git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
> git fetch --tags --progress https://github.com/larson-group/e3sm.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/larson-group/e3sm.git # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
> git rev-parse refs/remotes/origin/bmg929/atm/E3SM_clubb_silhs_1c77ed3_20211115_P3^{commit} # timeout=10
Checking out Revision 83421cfdc88083ef2e0487e0b8a2b84acd6d72cf (refs/remotes/origin/bmg929/atm/E3SM_clubb_silhs_1c77ed3_20211115_P3)
> git config core.sparsecheckout # timeout=10
> git checkout -f 83421cfdc88083ef2e0487e0b8a2b84acd6d72cf # timeout=10
Commit message: "Merge branch 'bmg929/atm/E3SM_clubb_silhs_1c77ed3_20211115_P3' of github.com:larson-group/E3SM into bmg929/atm/E3SM_clubb_silhs_1c77ed3_20211115_P3"
First time build. Skipping changelog.
Running in Durability level: MAX_SURVIVABILITY
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/branch_e3sm_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/e3sm.git
> git init /home/jenkins/workspace/branch_e3sm_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/e3sm.git
> git --version # timeout=10
> git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
> git fetch --tags --progress https://github.com/larson-group/e3sm.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/larson-group/e3sm.git # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
> git rev-parse refs/remotes/origin/bmg929/atm/E3SM_clubb_silhs_1c77ed3_20211115_P3^{commit} # timeout=10
Checking out Revision 83421cfdc88083ef2e0487e0b8a2b84acd6d72cf (refs/remotes/origin/bmg929/atm/E3SM_clubb_silhs_1c77ed3_20211115_P3)
> git config core.sparsecheckout # timeout=10
> git checkout -f 83421cfdc88083ef2e0487e0b8a2b84acd6d72cf # timeout=10
Commit message: "Merge branch 'bmg929/atm/E3SM_clubb_silhs_1c77ed3_20211115_P3' of github.com:larson-group/E3SM into bmg929/atm/E3SM_clubb_silhs_1c77ed3_20211115_P3"
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Branch and Submodules)
[Pipeline] sh
+ rm -f /home/jenkins/test_logs/e3sm_run_gfortran_test/atm.bldlog.211204-030522 /home/jenkins/test_logs/e3sm_run_gfortran_test/atm.bldlog.211204-030901 /home/jenkins/test_logs/e3sm_run_gfortran_test/atm.bldlog.211204-031332 /home/jenkins/test_logs/e3sm_run_gfortran_test/atm.log.211204-030848 /home/jenkins/test_logs/e3sm_run_gfortran_test/atm.log.211204-031321 /home/jenkins/test_logs/e3sm_run_gfortran_test/atm.log.211204-031723 /home/jenkins/test_logs/e3sm_run_gfortran_test/e3sm.bldlog.211204-030522 /home/jenkins/test_logs/e3sm_run_gfortran_test/e3sm.bldlog.211204-030901 /home/jenkins/test_logs/e3sm_run_gfortran_test/e3sm.bldlog.211204-031332 /home/jenkins/test_logs/e3sm_run_gfortran_test/e3sm.log.211204-030848 /home/jenkins/test_logs/e3sm_run_gfortran_test/e3sm.log.211204-031321 /home/jenkins/test_logs/e3sm_run_gfortran_test/e3sm.log.211204-031723
+ git submodule init
Submodule 'cime' (https://github.com/ESMCI/cime.git) registered for path 'cime'
Submodule 'cosp2' (git@github.com:CFMIP/COSPv2.0.git) registered for path 'components/eam/src/physics/cosp2/external'
Submodule 'rrtmgp' (git@github.com:RobertPincus/rte-rrtmgp.git) registered for path 'components/eam/src/physics/rrtmgp/external'
Submodule 'fates' (git@github.com:NGEET/fates.git) registered for path 'components/elm/src/external_models/fates'
Submodule 'alm-mpp' (git@github.com:MPP-LSM/MPP.git) registered for path 'components/elm/src/external_models/mpp'
Submodule 'sbetr' (git@github.com:BeTR-biogeochemistry-modeling/sbetr.git) registered for path 'components/elm/src/external_models/sbetr'
Submodule 'components/mpas-source' (https://github.com/MPAS-Dev/MPAS-Model.git) registered for path 'components/mpas-source'
Submodule 'externals/YAKL' (git@github.com:mrnorman/YAKL.git) registered for path 'externals/YAKL'
Submodule 'externals/cub' (git@github.com:NVlabs/cub.git) registered for path 'externals/cub'
Submodule 'externals/kokkos' (https://github.com/E3SM-Project/kokkos.git) registered for path 'externals/kokkos'
Submodule 'externals/scorpio' (https://github.com/E3SM-Project/scorpio.git) registered for path 'externals/scorpio'
Submodule 'externals/scorpio_classic' (https://github.com/E3SM-Project/scorpio.git) registered for path 'externals/scorpio_classic'
+ git submodule update
Cloning into 'cime'...
Submodule path 'cime': checked out '2b49cf54f1fb0a53832762dc29f19fc31c491d31'
Cloning into 'components/eam/src/physics/cosp2/external'...
Host key verification failed.
fatal: Could not read from remote repository.
Please make sure you have the correct access rights
and the repository exists.
Clone of 'git@github.com:CFMIP/COSPv2.0.git' into submodule path 'components/eam/src/physics/cosp2/external' failed
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Modify Run Scripts)
Stage "Modify Run Scripts" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run BOMEX)
Stage "Run BOMEX" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run DYCOMSrf01)
Stage "Run DYCOMSrf01" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run RICO)
Stage "Run RICO" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Display BOMEX log files)
Stage "Display BOMEX log files" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Display DYCOMSrf01 log files)
Stage "Display DYCOMSrf01 log files" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Display RICO log files)
Stage "Display RICO log files" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE