![[Jenkins]](/jenkins/static/57c8a776/images/svgs/logo.svg){kind=logo}
Started by user Steffen Domke Obtained jenkins_tests/sam_clubb_pgi_build/Jenkinsfile from git https://github.com/larson-group/sam_clubb.git [Pipeline] Start of Pipeline [Pipeline] node Running on Jenkins in /home/jenkins/workspace/sam_clubb_pgi_build [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git > git rev-parse --resolve-git-dir /home/jenkins/workspace/sam_clubb_pgi_build/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/larson-group/sam_clubb.git # timeout=10 Fetching upstream changes from https://github.com/larson-group/sam_clubb.git > git --version # timeout=10 > git --version # 'git version 2.30.2' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --force --progress -- https://github.com/larson-group/sam_clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 8e3aea7f7eeeaa6100a3388f698b27ab5381df99 (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 8e3aea7f7eeeaa6100a3388f698b27ab5381df99 # timeout=10 Commit message: "Autoupdated tunable_parameters Commit a323ae3e38c8d4f569b839cf64f11614183dd9f1 Author: domkesteffen Date: Tue Jun 27 18:37:17 2023 -0500 CLUBB ticket #1069: (#1092) - Added tunable parameter bv_efold - Removed extraneous use statement in src/CLUBB_core/advance_xm_wpxp_module.F90 - Removed obsolete flag l_update_pressure from input/tunable_parameters_Lscale/configurable_model_flags.in - Changed tmp_calc_min -> tmp_calc in src/CLUBB_core/advance_helper_module.F90 No autocommit messages found, printed latest commit from tunable_parameters instead. Please make sure the that there are previous autocommit messages, or that the external repo is properly configured." > git rev-list --no-walk 8e3aea7f7eeeaa6100a3388f698b27ab5381df99 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Edit Makefile) [Pipeline] sh + sed -i 's/FFLAGS += -I.*/FFLAGS += -I${INC_MPI} -I${INC_NETCDF} -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART/g' Makefile [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Edit Default Case) [Pipeline] sh + sed -i 's/nstop.*/nstop = 6,/g' DYCOMS_RF02/prm [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile) [Pipeline] sh + ./Build if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_2D ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_2D if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_3D ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_3D if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOMENTS ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOMENTS if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_STAT ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_STAT if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOVIES ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOVIES if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/RESTART ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/RESTART if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OBJ ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OBJ if ! ( -d OUT_2D ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_2D OUT_2D if ! ( -d OUT_3D ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_3D OUT_3D if ! ( -d OUT_MOMENTS ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOMENTS OUT_MOMENTS if ! ( -d OUT_STAT ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_STAT OUT_STAT if ! ( -d OUT_MOVIES ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOVIES OUT_MOVIES if ! ( -d RESTART ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/RESTART RESTART if ! ( -d OBJ ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OBJ OBJ cat if ( -e /home/jenkins/workspace/sam_clubb_pgi_build/OBJ/MICRO_RAD_OPTIONS ) then cmp -s /home/jenkins/workspace/sam_clubb_pgi_build/OBJ/MICRO_RAD_OPTIONS MICRO_RAD_OPTIONS.new if ( 0 != 0 ) then endif mv -f MICRO_RAD_OPTIONS.new /home/jenkins/workspace/sam_clubb_pgi_build/OBJ/MICRO_RAD_OPTIONS cd /home/jenkins/workspace/sam_clubb_pgi_build/OBJ if ( ! ( -e Filepath ) ) then gmake -j4 -f /home/jenkins/workspace/sam_clubb_pgi_build/Makefile /opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.5.3-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.5.3-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/micro_field_utils.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.5.3-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/nudging.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.5.3-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/RAD_CAM/rad_full.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.5.3-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/radiation.F90; NVFORTRAN-S-0186-Argument missing for formal argument bv_efold (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90: 705) NVFORTRAN-S-0186-Argument missing for formal argument params (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90: 731) 0 inform, 0 warnings, 2 severes, 0 fatal for clubb_sgs_setup /opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.5.3-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/statistics.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/22.5/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.5.3-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/subsidence.F90; NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/statistics.F90: 192) 0 inform, 1 warnings, 0 severes, 0 fatal for statistics gmake: *** [/home/jenkins/workspace/sam_clubb_pgi_build/Makefile:699: clubb_sgs.o] Error 2 gmake: *** Waiting for unfinished jobs.... [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run SAM) Stage "Run SAM" skipped due to earlier failure(s) [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] sh + cat runsam.log cat: runsam.log: No such file or directory [Pipeline] echo SAM did not create a log. [Pipeline] sh + cp runsam.log /home/jenkins/test_logs/sam_clubb_pgi_build/ cp: cannot stat 'runsam.log': No such file or directory [Pipeline] } [Pipeline] // script Error when executing always post condition: hudson.AbortException: script returned exit code 1 at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.handleExit(DurableTaskStep.java:664) at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.check(DurableTaskStep.java:610) at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.run(DurableTaskStep.java:554) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:304) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) at java.base/java.lang.Thread.run(Thread.java:829) [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 2 Finished: FAILURE