Started by user Keegan Rhodes
Lightweight checkout support not available, falling back to full checkout.
Checking out git <a href='https://github.com/larson-group/e3sm.git'>https://github.com/larson-group/e3sm.git</a> into /home/jenkins/workspace/e3sm_run_test@script to read jenkins_tests/e3sm_run_test/Jenkinsfile
The recommended git tool is: git
 &gt; git rev-parse --resolve-git-dir /home/jenkins/workspace/e3sm_run_test@script/.git # timeout=10
Fetching changes from the remote Git repository
 &gt; git config remote.origin.url <a href='https://github.com/larson-group/e3sm.git'>https://github.com/larson-group/e3sm.git</a> # timeout=10
Fetching upstream changes from <a href='https://github.com/larson-group/e3sm.git'>https://github.com/larson-group/e3sm.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 &gt; git fetch --tags --progress <a href='https://github.com/larson-group/e3sm.git'>https://github.com/larson-group/e3sm.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
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Seen 1,770 remote branches
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Checking out Revision c0797a7f204bf6c3e61b5934d30c765329532605 (origin/clubb_silhs_devel)
 &gt; git config core.sparsecheckout # timeout=10
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Commit message: "Update draw_plots_hoz_2D.py"
 &gt; git rev-list --no-walk 0931c26d81fd3c494783fc6c37a1327e155a9271 # timeout=10
Running in Durability level: MAX_SURVIVABILITY
[Pipeline] Start of Pipeline
[Pipeline] node
<span class="pipeline-node-3">Running on Jenkins in /home/jenkins/workspace/e3sm_run_test
</span>[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
<span class="pipeline-node-7">The recommended git tool is: git
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Fetching changes from the remote Git repository
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Fetching upstream changes from <a href='https://github.com/larson-group/e3sm.git'>https://github.com/larson-group/e3sm.git</a>
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 &gt; git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 &gt; git fetch --tags --progress <a href='https://github.com/larson-group/e3sm.git'>https://github.com/larson-group/e3sm.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
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Seen branch in repository origin/worleyph/cam/create_chunks_fix
Seen branch in repository origin/worleyph/cam/deallocate_add
Seen branch in repository origin/worleyph/cam/fix_chunk_cost
Seen branch in repository origin/worleyph/cam/fix_chunkcost
Seen branch in repository origin/worleyph/cam/fix_uninitialized_variable
Seen branch in repository origin/worleyph/cam/print_cost_p_fix
Seen branch in repository origin/worleyph/cam/print_cost_p_fixupd
Seen branch in repository origin/worleyph/cam/runtime_pcols
Seen branch in repository origin/worleyph/cam/runtime_pcols_part1
Seen branch in repository origin/worleyph/cam/runtime_pcols_part2
Seen branch in repository origin/worleyph/cam/user_defined_lbal
Seen branch in repository origin/worleyph/cam/write_cost_p_opt
Seen branch in repository origin/worleyph/cice/smaller_msg_tags
Seen branch in repository origin/worleyph/cime/anvil_perfarch_update
Seen branch in repository origin/worleyph/cime/chrysalis_support
Seen branch in repository origin/worleyph/cime/compy_perf_arch
Seen branch in repository origin/worleyph/cime/fix_memset_calls
Seen branch in repository origin/worleyph/cime/gather_bug
Seen branch in repository origin/worleyph/cime/init_profiling
Seen branch in repository origin/worleyph/cime/min_mpi_startup_cost
Seen branch in repository origin/worleyph/cime/project_updates_2019
Seen branch in repository origin/worleyph/cime/reprosum_fix
Seen branch in repository origin/worleyph/cime/reprosum_i4_fix
Seen branch in repository origin/worleyph/components/disable_taskmap_write
Seen branch in repository origin/worleyph/components/taskmap_control2
Seen branch in repository origin/worleyph/eam/call-by-ref-bugfix
Seen branch in repository origin/worleyph/machinefiles/add_m3411
Seen branch in repository origin/worleyph/machinefiles/compy_impi_workaround
Seen branch in repository origin/worleyph/machinefiles/compy_pgi_flags
Seen branch in repository origin/worleyph/machines/chrysalis_save_timing_dir
Seen branch in repository origin/worleyph/machines/remove_sqs
Seen branch in repository origin/worleyph/maint-1.0/update_provenance_capture
Seen branch in repository origin/worleyph/maint-1.1/update_provenance_capture
Seen branch in repository origin/wyigzaw/mosart/lake
Seen branch in repository origin/wyigzaw/mosart/stratification
Seen branch in repository origin/xtcai-lbl/lnd/bgccomparison
Seen branch in repository origin/xuezheng/atm/20200705_mincdnc_clubbv2
Seen branch in repository origin/xuezheng/atm/alpha3_20200705
Seen branch in repository origin/xuezheng/atm/clubbv2_3a93b5bca7db7440f237941f1a366b9dacaf4ad2
Seen branch in repository origin/xuezheng/atm/micro_substeps_output
Seen branch in repository origin/xuezhengllnl/atm/20200903_CLUBBv2
Seen branch in repository origin/xyuan/cime_gpu
Seen branch in repository origin/xyuan/crm_p3
Seen branch in repository origin/xyuan/crm_thread
Seen branch in repository origin/xyuan/esmt
Seen branch in repository origin/xyuan/mmf/add-esmt-cpp
Seen branch in repository origin/xyuan/mmf/esmt_bug_fix
Seen branch in repository origin/xyuan/omp
Seen branch in repository origin/xyuan/omp4.5
Seen branch in repository origin/xyuan/openmp4.5
Seen branch in repository origin/xyuan/openmp4.5_1014
Seen branch in repository origin/xyuan/openmp4.5_new
Seen branch in repository origin/xyuan2/summit
Seen branch in repository origin/yangx/elm/c14_bugfix
Seen branch in repository origin/yangx/lnd/dos2unix_2files
Seen branch in repository origin/yangx/lnd/outputs_bugfix
Seen branch in repository origin/yangx/lnd/outputs_bugfix_maint-1.1
Seen branch in repository origin/yangx/lnd/outputvariable_bugfix
Seen branch in repository origin/yanhp-2009/atm/E3SMv1_DT_SENS
Seen branch in repository origin/yanhp-2009/atm/E3SMv1_add_diag_MG
Seen branch in repository origin/yanhp/atm/E3SMv1_DENSE_DRIBBLINE
Seen branch in repository origin/yfeng/eam/dust2updates
Seen branch in repository origin/yfeng/eam/dust2updatesRRTMGP
Seen branch in repository origin/yinghuilu/test952
Seen branch in repository origin/youngsung/machinefile/spock
Seen branch in repository origin/zelk
Seen branch in repository origin/zhan391/atm/E3SMDA_LDRD
Seen branch in repository origin/zhan391/atm/E3SM_CLUBBv2_INIT
Seen branch in repository origin/zhan391/atm/E3SM_Code_for_Wan_et_al_2020_GMD
Seen branch in repository origin/zhan391/atm/E3SMv1_201806
Seen branch in repository origin/zhan391/atm/E3SMv1_DRIBBLING_TEST
Seen branch in repository origin/zhan391/atm/E3SMv1_DT_SENS
Seen branch in repository origin/zhan391/atm/E3SMv1_Nudging_Issue
Seen branch in repository origin/zhan391/atm/E3SMv1_Tendency_Dribbling
Seen branch in repository origin/zhan391/atm/E3SMv1_Water_Budget
Seen branch in repository origin/zhan391/atm/E3SMv1_cnvg_201907
Seen branch in repository origin/zhan391/atm/E3SMv1_tendency_dribbling
Seen branch in repository origin/zhan391/atm/E3SMv2_202012_alpha59
Seen branch in repository origin/zhan391/atm/E3SMv2_CLUBB
Seen branch in repository origin/zhan391/atm/E3SMv2_CLUBB_RDP
Seen branch in repository origin/zhan391/atm/E3SMv2_RDP_CLUBB
Seen branch in repository origin/zhan391/atm/E3SMv2_SciDAC
Seen branch in repository origin/zhan391/atm/E3SMv2_warmint_CLUBB
Seen branch in repository origin/zhan391/atm/EAM_water_budget
Seen branch in repository origin/zhan391/atm/WanH_JAMES_2020_cam4_physics_revised_splitting
Seen branch in repository origin/zhan391/atm/WanH_JAMES_2020_simple_condensation
Seen branch in repository origin/zhan391/atm/clubb_reduce_precision
Seen branch in repository origin/zhan391/atm/clubb_reduce_precnew
Seen branch in repository origin/zhan391/atm/clubb_reduce_precnew_option2
Seen branch in repository origin/zhan391/atm/clubb_reduce_precrpe
Seen branch in repository origin/zhan391/atm/clubb_singularity
Seen branch in repository origin/zhan391/atm/clubb_substep_output
Seen branch in repository origin/zhan391/atm/clubb_uveqn_implicit
Seen branch in repository origin/zhan391/atm/condensation_ql_incld
Seen branch in repository origin/zhan391/atm/condensation_rebase_201806
Seen branch in repository origin/zhan391/atm/dycore_jw_baroclinic
Seen branch in repository origin/zhan391/atm/e3sm_cam4_convg
Seen branch in repository origin/zhan391/atm/e3sm_cam5da
Seen branch in repository origin/zhan391/atm/e3sm_clubb_warmint
Seen branch in repository origin/zhan391/atm/e3sm_code_for_gmd_2020_330
Seen branch in repository origin/zhan391/atm/e3sm_dartda
Seen branch in repository origin/zhan391/atm/e3smv1_scm_ioptest
Seen branch in repository origin/zhan391/atm/e3smv1_tendency_dribbling
Seen branch in repository origin/zhan391/atm/e3smv1_water_budget
Seen branch in repository origin/zhan391/atm/e3smv2_202012_alpha59
Seen branch in repository origin/zhan391/atm/iop_bug_fix_for_maint1.0
Seen branch in repository origin/zhan391/atm/jw_dycore_truncation
Seen branch in repository origin/zhan391/atm/maint-1.0_radcpl_and_dribbling
Seen branch in repository origin/zhan391/atm/nudging_code_enhance_e3smv2_master
Seen branch in repository origin/zhan391/atm/nuding_code_enhance_mait1.1
Seen branch in repository origin/zhan391/atm/nuding_code_enhance_mait1.2
Seen branch in repository origin/zhan391/atm/nuding_file_name_length_maint1.0
Seen branch in repository origin/zhan391/atm/redprc_d_p_coupling
Seen branch in repository origin/zhan391/atm/reduced_precision_dycore_jwtest_dp
Seen branch in repository origin/zhan391/atm/reduced_precision_dycore_jwtest_hpuv
Seen branch in repository origin/zhan391/atm/reduced_precision_dycore_jwtest_spuv
Seen branch in repository origin/zhan391/atm/reduced_precision_dycore_only_dp
Seen branch in repository origin/zhan391/atm/reduced_precision_dycore_only_spuv
Seen branch in repository origin/zhan391/atm/reduced_precision_dycore_only_spuvtps
Seen branch in repository origin/zhan391/atm/reduced_precision_e3sm_full_dp
Seen branch in repository origin/zhan391/atm/reduced_precision_e3sm_full_pseudohpclubb
Seen branch in repository origin/zhan391/atm/reduced_precision_e3sm_full_spclubb
Seen branch in repository origin/zhan391/atm/scm_iop_convergence
Seen branch in repository origin/zhan391/atm/tendency_dribbling_eamv1
Seen branch in repository origin/zhun/atm/EAM_tau_ZM
Seen branch in repository origin/zhun/atm/NGD_CLUBB_silhs_tau
Seen branch in repository origin/zhun/atm/NGD_from_EAMtau_20200901
Seen branch in repository origin/zhun/atm/clubb_silhs_v2
Seen branch in repository origin/zhun/atm/clubbv2_tau_diagnosed
Seen branch in repository origin/zhun/gass_dcp_20200831
Seen branch in repository origin/zshaheen/run_e3sm_fixes
Seen branch in repository origin/zun
Seen 1,769 remote branches
 &gt; git show-ref --tags -d # timeout=10
Checking out Revision c0797a7f204bf6c3e61b5934d30c765329532605 (origin/clubb_silhs_devel)
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f c0797a7f204bf6c3e61b5934d30c765329532605 # timeout=10
Commit message: "Update draw_plots_hoz_2D.py"
</span>[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Branch and Submodules)
[Pipeline] sh
<span class="pipeline-node-14">+ git submodule init
Submodule 'components/cam/src/physics/rrtmgp/external' (<a href='https://github.com/RobertPincus/rte-rrtmgp.git'>https://github.com/RobertPincus/rte-rrtmgp.git</a>) registered for path 'components/cam/src/physics/rrtmgp/external'
Submodule 'components/clm/src/external_models/fates' (<a href='https://github.com/NGEET/fates.git'>https://github.com/NGEET/fates.git</a>) registered for path 'components/clm/src/external_models/fates'
Submodule 'alm-mpp' (<a href='https://github.com/MPP-LSM/MPP.git'>https://github.com/MPP-LSM/MPP.git</a>) registered for path 'components/clm/src/external_models/mpp'
Submodule 'sbetr' (<a href='https://github.com/BeTR-biogeochemistry-modeling/sbetr.git'>https://github.com/BeTR-biogeochemistry-modeling/sbetr.git</a>) registered for path 'components/clm/src/external_models/sbetr'
Submodule 'components/mpas-source' (<a href='https://github.com/MPAS-Dev/MPAS-Model.git'>https://github.com/MPAS-Dev/MPAS-Model.git</a>) registered for path 'components/mpas-source'
Submodule 'externals/scorpio_classic' (<a href='https://github.com/E3SM-Project/scorpio.git'>https://github.com/E3SM-Project/scorpio.git</a>) registered for path 'externals/scorpio_classic'
+ git submodule update
Cloning into 'components/cam/src/physics/rrtmgp/external'...
Submodule path 'components/cam/src/physics/rrtmgp/external': checked out '0b1cffdd51a35045c28aae314e2b29e2a663b5e6'
Cloning into 'components/clm/src/external_models/fates'...
Submodule path 'components/clm/src/external_models/fates': checked out '1ad93c311ed1a5d45df656b9031c8714a7071e64'
Cloning into 'components/clm/src/external_models/mpp'...
Submodule path 'components/clm/src/external_models/mpp': checked out '82ef0c1a37ffd469e9a6ce84dbf487c6ef8762b2'
Cloning into 'components/clm/src/external_models/sbetr'...
Submodule path 'components/clm/src/external_models/sbetr': checked out 'd71fb2df928099bacc4e9a3a9f4b8a1f2a6e37a1'
Cloning into 'components/mpas-source'...
Submodule path 'components/mpas-source': checked out 'bb1ea15299544e2b25144c06c621ff40fa482760'
Cloning into 'externals/scorpio_classic'...
Submodule path 'externals/scorpio_classic': checked out '1e538b56fa7cfa209c119e866a95669875eb200d'
</span>[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Modify Run Scripts)
[Pipeline] sh
<span class="pipeline-node-19">+ sed -i s/carson/nelson/g nightly_test/nightly_e3sm_scm_BOMEX.csh
+ sed -i s/carson/nelson/g nightly_test/nightly_e3sm_scm_DYCOMSrf01.csh
+ sed -i s/carson/nelson/g nightly_test/nightly_e3sm_scm_RICO.csh
</span>[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run BOMEX)
[Pipeline] sh
<span class="pipeline-node-24">+ source /opt/intel/bin/ifortvars.sh intel64
++ PROD_DIR=/opt/intel/compilers_and_libraries_2019/linux
++ INTEL_TARGET_ARCH=
++ INTEL_TARGET_PLATFORM=linux
+++ uname
++ INTEL_HOST_PLATFORM=Linux
++ COMPILERVARS_ARGV=1
++ '[' 1 -eq 0 ']'
++ '[' 1 -gt 0 ']'
++ opt=intel64
++ case $opt in
++ INTEL_TARGET_ARCH=intel64
++ shift
++ '[' 0 -gt 0 ']'
++ '[' intel64 '!=' ia32 -a intel64 '!=' intel64 -o linux '!=' android -a linux '!=' linux -a linux '!=' mac -o Linux = Darwin -a intel64 '!=' intel64 ']'
++ '[' linux = mac ']'
++ '[' 1 -eq 0 ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/daal/bin/daalvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/../../debugger_2019/bin/debuggervars.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/../../debugger_2019/bin/debuggervars.sh intel64
+++ INST=/opt/intel
+++ DIR_DEBUGGER=/opt/intel/debugger_2019
+++ DIR_DOCUMENTATION=/opt/intel/documentation_2019
+++ '[' '!' -d /opt/intel ']'
+++ case "$(uname -sm)" in
++++ uname -sm
+++ DEBUGGERARCH=intel64
+++ '[' -n /opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ case ${PATH} in
+++ '[' -n '' ']'
+++ '[' -n '' ']'
+++ '[' -n en_US.UTF-8 ']'
+++ LANGUAGE_TERRITORY=en_US.UTF-8
+++ case ${LANGUAGE_TERRITORY} in
+++ LANGUAGE_TERRITORY=en
+++ '[' '!' -d /opt/intel/documentation_2019/en/debugger ']'
+++ '[' -d /opt/intel/documentation_2019/en/debugger/gdb-ia ']'
+++ '[' -n '' ']'
+++ GDBINFO=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ '[' -n '' ']'
+++ GDBMAN=/opt/intel/documentation_2019/en/debugger/gdb-ia/man/
+++ '[' -n '' ']'
+++ export NLSPATH=/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ '[' -n /opt/intel/documentation_2019/en/debugger/gdb-ia/info/ ']'
+++ '[' -n '' ']'
+++ export INFOPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ INFOPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ '[' -n /opt/intel/documentation_2019/en/debugger/gdb-ia/man/ ']'
+++ '[' -n '$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
+++ export 'MANPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ MANPATH='/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ export INTEL_PYTHONHOME=/opt/intel/debugger_2019/python/intel64/
+++ INTEL_PYTHONHOME=/opt/intel/debugger_2019/python/intel64/
+++ '[' -n /opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ export PATH=/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ PATH=/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
++++ uname -s
+++ '[' Linux '!=' Darwin ']'
+++ '[' -d /opt/intel/debugger_2019/libipt/intel64/lib ']'
+++ '[' -n '$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ unset INST DIR_DEBUGGER DIR_DOCUMENTATION DEBUGGERARCH LANGUAGE_TERRITORY GDBINFO GDBMAN
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/tbb/bin/tbbvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/pstl/bin/pstlvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/mkl/bin/mklvars.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/mkl/bin/mklvars.sh intel64
+++ set_mkl_env intel64
+++ CPRO_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux
+++ export MKLROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl
+++ MKLROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl
+++ __mkl_tmp_SCRIPT_NAME=mklvars.sh
+++ __mkl_tmp_MOD_NAME=mod
+++ __mkl_tmp_LP64_ILP64=
+++ __mkl_tmp_MOD=
+++ __mkl_tmp_TARGET_ARCH=
+++ __mkl_tmp_MKLVARS_VERBOSE=
+++ __mkl_tmp_BAD_SWITCH=
+++ '[' -z intel64 ']'
+++ '[' -n intel64 ']'
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ __mkl_tmp_TARGET_ARCH=intel64
+++ shift
+++ '[' -n '' ']'
+++ '[' -n '' ']'
+++ '[' -z intel64 ']'
+++ __compiler_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib
+++ __mkl_lib_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib
+++ __tbb_lib_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib
+++ __cpath=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ __subdir_arch_ia32=ia32_lin
+++ __subdir_arch_intel64=intel64_lin
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ __target_arch_path=intel64_lin
+++ __tbb_path_arch=
+++ '[' -z '' ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib ']'
+++ '[' intel64_lin = ia32_lin ']'
++++ set_tbb_path intel64_lin
++++ __tmp_target_arch_path=intel64_lin
+++++ get_tbb_library_directory
+++++ __tbb_tmp_lib_dir=gcc4.1
+++++ which gcc
+++++ '[' 0 -eq 0 ']'
++++++ gcc --version
++++++ grep gcc
++++++ egrep -o ' [0-9]+\.[0-9]+\.[0-9]+.*'
++++++ sed -e 's/^\ //'
+++++ __tbb_tmp_gcc_version_full='8.3.1 20190311 (Red Hat 8.3.1-3)'
+++++ '[' 0 -eq 0 ']'
++++++ echo '8.3.1 20190311 (Red Hat 8.3.1-3)'
++++++ egrep -o '^[0-9]+\.[0-9]+\.[0-9]+'
+++++ __tbb_tmp_gcc_version=8.3.1
+++++ case "${__tbb_tmp_gcc_version}" in
+++++ __tbb_tmp_lib_dir=gcc4.7
+++++ echo gcc4.7
++++ __tmp_tbb_subdir=/gcc4.7
++++ __tmp_tbb_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
+++ __tbb_path_arch=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ set_ld_library_path intel64_lin /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_target_arch_path=intel64_lin
++++ __tmp_ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ __tmp_tbb_arch_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ __ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ set_library_path intel64_lin /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_target_arch_path=intel64_lin
++++ __tmp_tbb_arch_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ '[' intel64_lin = ia32_lin ']'
++++ __tmp_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ __tmp_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ __library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ set_nls_path intel64_lin
++++ __tmp_target_arch_path=intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N
+++ __nlspath=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N
+++ '[' '' = mod ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ export NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ export CPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ CPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ export PKG_CONFIG_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/bin/pkgconfig
+++ PKG_CONFIG_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/bin/pkgconfig
+++ '[' '' = verbose ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/ipp/bin/ippvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/ippcp/bin/ippcpvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/mpi/intel64/bin/mpivars.sh ']'
++ '[' intel64 = intel64 -o '' = intel64 ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/mpi/intel64/bin/mpivars.sh
+++ I_MPI_ROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi
+++ export I_MPI_ROOT
+++ '[' -z /opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ export PATH
+++ '[' -z '' ']'
+++ CLASSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/mpi.jar
+++ export CLASSPATH
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LD_LIBRARY_PATH
+++ '[' -z '/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
+++ MANPATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ export MANPATH
+++ '[' -z '' ']'
+++ i_mpi_ofi_library_internal=1
+++ i_mpi_library_kind=
+++ '[' 0 -gt 0 ']'
+++ case "$i_mpi_library_kind" in
+++ case "$i_mpi_ofi_library_internal" in
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ export PATH
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LD_LIBRARY_PATH
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin ']'
+++ LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ export LIBRARY_PATH
+++ FI_PROVIDER_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib/prov
+++ export FI_PROVIDER_PATH
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/pkg_bin/compilervars_arch.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/pkg_bin/compilervars_arch.sh intel64 linux
+++ INTEL_INSTALL_DIR_ORIG=
+++ INTEL_NDK_DIR_ORIG=
+++ INSTALL_DIR=/opt/intel/compilers_and_libraries_2019.4.243/linux
+++ NDK_DIR='&lt;NDK_DIR&gt;'
+++ NDK_ARCH=
++++ uname
+++ INTEL_HOST_PLATFORM=Linux
+++ '[' 2 -eq 0 ']'
+++ INTEL_TARGET_ARCH=intel64
+++ INTEL_TARGET_PLATFORM=linux
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ NDK_ARCH=x86_64
+++ '[' -n '' ']'
+++ export PATH
+++ '[' linux = android ']'
+++ unset ICCCFG
+++ unset ICPCCFG
+++ unset ICXCFG
+++ unset ICPXCFG
+++ unset XIARCFG
+++ unset XILDCFG
+++ unset INTEL_USE_ENVIRONMENT
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-9/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-12/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-13/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-14/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-15/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-16/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-17/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-18/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-19/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-21/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-22/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-23/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-24/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-26/arch-x86_64' ']'
+++ '[' -d '&lt;NDK_DIR&gt;/toolchains/x86_64-4.9/prebuilt/linux-x86_64' ']'
+++ '[' Linux = Darwin ']'
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ '[' intel64 = ia32 -a -d /opt/intel/compilers_and_libraries_2019.4.243/linux/mpirt/lib/ia32_lin ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/mic ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/mic/lib ']'
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N ']'
+++ export NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ '[' intel64 = ia32 ']'
+++ '[' -z '' ']'
+++ export INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2019.4.243/linux/licenses:/opt/intel/licenses:/home/jenkins/intel/licenses
+++ INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2019.4.243/linux/licenses:/opt/intel/licenses:/home/jenkins/intel/licenses
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/../../man/common ']'
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
++++ cd /opt/intel/compilers_and_libraries_2019.4.243/linux/../../man/common
++++ pwd
+++ export 'MANPATH=/opt/intel/man/common:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ MANPATH='/opt/intel/man/common:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ '[' -n ']'
+++ INSTALL_DIR=
+++ '[' -n ']'
+++ NDK_DIR=
+++ unset INTEL_INSTALL_DIR_ORIG
+++ unset INTEL_NDK_DIR_ORIG
+ bash -c 'export e3smSource=/home/jenkins/workspace/e3sm_run_test; csh nightly_test/nightly_e3sm_scm_BOMEX.csh; exit 0'
Compset longname is SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV
Compset specification file is /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/config_compsets.xml
Automatically adding SIAC to compset
Automatically adding SESP to compset
Compset forcing is 
ATM component is cam5 physics:
LND component is clm4.5 physics:clm4.5 Satellite phenology:
ICE component is prescribed cice:
OCN component is DOCN   prescribed ocean mode
ROF component is Stub river component
GLC component is Stub glacier (land ice) component
WAV component is Stub wave component
IAC component is Stub iac component
ESP component is Stub external system processing (ESP) component
Pes     specification file is /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/allactive/config_pesall.xml
Machine is nelson
Pes setting: grid match    is a%ne16np4_ 
Pes setting: grid          is a%ne16np4_l%ne16np4_oi%ne16np4_r%null_g%null_w%null_z%null_m%gx3v7 
Pes setting: compset       is SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SIAC_SESP 
Pes setting: tasks       is {'NTASKS_ATM': 64, 'NTASKS_ICE': 64, 'NTASKS_CPL': 64, 'NTASKS_LND': 64, 'NTASKS_WAV': 64, 'NTASKS_ROF': 64, 'NTASKS_OCN': 64, 'NTASKS_GLC': 64} 
Pes setting: threads     is {'NTHRDS_ICE': 1, 'NTHRDS_ATM': 1, 'NTHRDS_ROF': 1, 'NTHRDS_LND': 1, 'NTHRDS_WAV': 1, 'NTHRDS_OCN': 1, 'NTHRDS_CPL': 1, 'NTHRDS_GLC': 1} 
Pes setting: rootpe      is {'ROOTPE_OCN': 0, 'ROOTPE_LND': 0, 'ROOTPE_ATM': 0, 'ROOTPE_ICE': 0, 'ROOTPE_WAV': 0, 'ROOTPE_CPL': 0, 'ROOTPE_ROF': 0, 'ROOTPE_GLC': 0} 
Pes setting: pstrid      is {} 
Pes other settings: {}
Pes comments: none
 Compset is: SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SIAC_SESP 
 Grid is: a%ne16np4_l%ne16np4_oi%ne16np4_r%null_g%null_w%null_z%null_m%gx3v7 
 Components in compset are: ['cam', 'clm', 'cice', 'docn', 'srof', 'sglc', 'swav', 'siac', 'sesp', 'drv'] 
No charge_account info available, using value from PROJECT
e3sm model version found: c0797a7
Batch_system_type is none
 Creating Case directory /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/case_scripts
ERROR: No variable BASELINE_ROOT found in case
ERROR: No variable CCSM_CPRNC found in case
setting case file to env_batch.xml
ERROR: No queues found
/home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/case_scripts/env_mach_specific.xml already exists, delete to replace
/home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/case_scripts/env_mach_specific.xml already exists, delete to replace
Creating batch scripts
Writing case.run script from input template /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/machines/template.case.run
Creating file .case.run
Writing case.st_archive script from input template /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/machines/template.st_archive
Creating file case.st_archive
Creating file .case.run.sh
Creating user_nl_xxx files for components and cpl
If an old case build already exists, might want to run 'case.build --clean' before building
Generating component namelists as part of setup
Creating component namelists
  2021-07-02 08:55:58 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 08:55:58 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 08:55:58 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 08:55:59 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 08:55:59 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 08:55:59 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 08:55:59 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 08:55:59 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 08:55:59 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 08:55:59 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
You can now run './preview_run' to get more info on how your case will be run
Building case in directory /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/case_scripts
sharedlib_only is False
model_only is False
Generating component namelists as part of build
Creating component namelists
  2021-07-02 08:56:01 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 08:56:01 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 08:56:01 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 08:56:02 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 08:56:02 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 08:56:02 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 08:56:02 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 08:56:02 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 08:56:02 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 08:56:02 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Building gptl with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/gptl.bldlog.210702-085601
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.gptl
Component gptl build complete with 1 warnings
Building mct with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/mct.bldlog.210702-085601
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.mct
Building pio with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/pio.bldlog.210702-085601
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.pio
Building csm_share with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/csm_share.bldlog.210702-085601
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.csm_share
Component csm_share build complete with 4 warnings
         - Building atm Library 
Building atm with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/atm.bldlog.210702-085601
         - Building lnd Library 
Building lnd with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/lnd.bldlog.210702-085601
         - Building ice Library 
Building ice with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/ice.bldlog.210702-085601
         - Building ocn Library 
Building ocn with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/ocn.bldlog.210702-085601
         - Building rof Library 
Building rof with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/rof.bldlog.210702-085601
         - Building glc Library 
Building glc with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/glc.bldlog.210702-085601
         - Building wav Library 
Building wav with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/wav.bldlog.210702-085601
         - Building iac Library 
Building iac with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/iac.bldlog.210702-085601
         - Building esp Library 
Building esp with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/esp.bldlog.210702-085601
srof built in 0.477202 seconds
swav built in 0.473038 seconds
sglc built in 0.519133 seconds
siac built in 0.507640 seconds
sesp built in 0.517023 seconds
docn built in 1.021124 seconds
Component ice build complete with 9 warnings
Component ice build complete with 9 warnings
cice built in 19.929555 seconds
Component lnd build complete with 6 warnings
Component lnd build complete with 6 warnings
clm built in 88.352435 seconds
Component atm build complete with 5 warnings
Component atm build complete with 5 warnings
cam built in 97.338110 seconds
Building e3sm with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/e3sm.bldlog.210702-085601 
Component e3sm exe build complete with 3 warnings
Time spent not building: 1.041090 sec
Time spent building: 146.331288 sec
MODEL BUILD HAS FINISHED SUCCESSFULLY
Creating component namelists
  2021-07-02 08:58:29 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 08:58:29 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 08:58:29 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 08:58:29 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 08:58:29 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 08:58:29 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 08:58:29 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 08:58:29 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 08:58:29 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 08:58:29 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Checking that inputdata is available as part of case submission
Loading input file list: 'Buildconf/cpl.input_data_list'
Loading input file list: 'Buildconf/docn.input_data_list'
Loading input file list: 'Buildconf/clm.input_data_list'
Model clm no file specified for finidat
Loading input file list: 'Buildconf/cam.input_data_list'
Loading input file list: 'Buildconf/cice.input_data_list'
Check case OK
submit_jobs case.run
Submit job case.run
Starting job script case.run
2021-07-02 08:58:29 CASE.RUN BEGINS HERE
2021-07-02 08:58:29 RUN_MODEL BEGINS HERE
2021-07-02 08:58:30 PRE_RUN_CHECK BEGINS HERE
2021-07-02 08:58:30 NAMELIST CREATION BEGINS HERE
Generating namelists for /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/case_scripts
Creating component namelists
  2021-07-02 08:58:30 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 08:58:30 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 08:58:30 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 08:58:30 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 08:58:30 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 08:58:30 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 08:58:30 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 08:58:30 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 08:58:30 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 08:58:30 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
2021-07-02 08:58:30 NAMELIST CREATION HAS FINISHED
-------------------------------------------------------------------------
 - Prestage required restarts into /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/run
 - Case input data directory (DIN_LOC_ROOT) is /home/pub/cam_inputdata 
 - Checking for required input datasets in DIN_LOC_ROOT
-------------------------------------------------------------------------
2021-07-02 08:58:30 PRE_RUN_CHECK HAS FINISHED
run command is /usr/local/mpi/MPICH-3.3.1-gfortran/bin/mpirun  -np 1 -prepend-rank /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_BOMEX/build/e3sm.exe   &gt;&gt; e3sm.log.$LID 2&gt;&amp;1  
2021-07-02 08:58:30 SAVE_PRERUN_PROVENANCE BEGINS HERE
2021-07-02 08:58:30 SAVE_PRERUN_PROVENANCE HAS FINISHED
2021-07-02 08:58:30 MODEL EXECUTION BEGINS HERE
2021-07-02 08:59:19 MODEL EXECUTION HAS FINISHED
2021-07-02 08:59:19 POST_RUN_CHECK BEGINS HERE
2021-07-02 08:59:19 POST_RUN_CHECK HAS FINISHED
2021-07-02 08:59:19 RUN_MODEL HAS FINISHED
2021-07-02 08:59:19 GET_TIMING BEGINS HERE
2021-07-02 08:59:19 GET_TIMING HAS FINISHED
2021-07-02 08:59:19 SAVE_POSTRUN_PROVENANCE BEGINS HERE
2021-07-02 08:59:19 SAVE_POSTRUN_PROVENANCE HAS FINISHED
check for resubmit
dout_s False 
mach nelson 
resubmit_num 0
2021-07-02 08:59:19 CASE.RUN HAS FINISHED
Submitted job case.run with id None
BOMEX was successful.
</span>[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run DYCOMSrf01)
[Pipeline] sh
<span class="pipeline-node-29">+ source /opt/intel/bin/ifortvars.sh intel64
++ PROD_DIR=/opt/intel/compilers_and_libraries_2019/linux
++ INTEL_TARGET_ARCH=
++ INTEL_TARGET_PLATFORM=linux
+++ uname
++ INTEL_HOST_PLATFORM=Linux
++ COMPILERVARS_ARGV=1
++ '[' 1 -eq 0 ']'
++ '[' 1 -gt 0 ']'
++ opt=intel64
++ case $opt in
++ INTEL_TARGET_ARCH=intel64
++ shift
++ '[' 0 -gt 0 ']'
++ '[' intel64 '!=' ia32 -a intel64 '!=' intel64 -o linux '!=' android -a linux '!=' linux -a linux '!=' mac -o Linux = Darwin -a intel64 '!=' intel64 ']'
++ '[' linux = mac ']'
++ '[' 1 -eq 0 ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/daal/bin/daalvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/../../debugger_2019/bin/debuggervars.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/../../debugger_2019/bin/debuggervars.sh intel64
+++ INST=/opt/intel
+++ DIR_DEBUGGER=/opt/intel/debugger_2019
+++ DIR_DOCUMENTATION=/opt/intel/documentation_2019
+++ '[' '!' -d /opt/intel ']'
+++ case "$(uname -sm)" in
++++ uname -sm
+++ DEBUGGERARCH=intel64
+++ '[' -n /opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ case ${PATH} in
+++ '[' -n '' ']'
+++ '[' -n '' ']'
+++ '[' -n en_US.UTF-8 ']'
+++ LANGUAGE_TERRITORY=en_US.UTF-8
+++ case ${LANGUAGE_TERRITORY} in
+++ LANGUAGE_TERRITORY=en
+++ '[' '!' -d /opt/intel/documentation_2019/en/debugger ']'
+++ '[' -d /opt/intel/documentation_2019/en/debugger/gdb-ia ']'
+++ '[' -n '' ']'
+++ GDBINFO=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ '[' -n '' ']'
+++ GDBMAN=/opt/intel/documentation_2019/en/debugger/gdb-ia/man/
+++ '[' -n '' ']'
+++ export NLSPATH=/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ '[' -n /opt/intel/documentation_2019/en/debugger/gdb-ia/info/ ']'
+++ '[' -n '' ']'
+++ export INFOPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ INFOPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ '[' -n /opt/intel/documentation_2019/en/debugger/gdb-ia/man/ ']'
+++ '[' -n '$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
+++ export 'MANPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ MANPATH='/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ export INTEL_PYTHONHOME=/opt/intel/debugger_2019/python/intel64/
+++ INTEL_PYTHONHOME=/opt/intel/debugger_2019/python/intel64/
+++ '[' -n /opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ export PATH=/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ PATH=/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
++++ uname -s
+++ '[' Linux '!=' Darwin ']'
+++ '[' -d /opt/intel/debugger_2019/libipt/intel64/lib ']'
+++ '[' -n '$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ unset INST DIR_DEBUGGER DIR_DOCUMENTATION DEBUGGERARCH LANGUAGE_TERRITORY GDBINFO GDBMAN
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/tbb/bin/tbbvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/pstl/bin/pstlvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/mkl/bin/mklvars.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/mkl/bin/mklvars.sh intel64
+++ set_mkl_env intel64
+++ CPRO_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux
+++ export MKLROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl
+++ MKLROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl
+++ __mkl_tmp_SCRIPT_NAME=mklvars.sh
+++ __mkl_tmp_MOD_NAME=mod
+++ __mkl_tmp_LP64_ILP64=
+++ __mkl_tmp_MOD=
+++ __mkl_tmp_TARGET_ARCH=
+++ __mkl_tmp_MKLVARS_VERBOSE=
+++ __mkl_tmp_BAD_SWITCH=
+++ '[' -z intel64 ']'
+++ '[' -n intel64 ']'
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ __mkl_tmp_TARGET_ARCH=intel64
+++ shift
+++ '[' -n '' ']'
+++ '[' -n '' ']'
+++ '[' -z intel64 ']'
+++ __compiler_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib
+++ __mkl_lib_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib
+++ __tbb_lib_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib
+++ __cpath=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ __subdir_arch_ia32=ia32_lin
+++ __subdir_arch_intel64=intel64_lin
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ __target_arch_path=intel64_lin
+++ __tbb_path_arch=
+++ '[' -z '' ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib ']'
+++ '[' intel64_lin = ia32_lin ']'
++++ set_tbb_path intel64_lin
++++ __tmp_target_arch_path=intel64_lin
+++++ get_tbb_library_directory
+++++ __tbb_tmp_lib_dir=gcc4.1
+++++ which gcc
+++++ '[' 0 -eq 0 ']'
++++++ gcc --version
++++++ grep gcc
++++++ egrep -o ' [0-9]+\.[0-9]+\.[0-9]+.*'
++++++ sed -e 's/^\ //'
+++++ __tbb_tmp_gcc_version_full='8.3.1 20190311 (Red Hat 8.3.1-3)'
+++++ '[' 0 -eq 0 ']'
++++++ echo '8.3.1 20190311 (Red Hat 8.3.1-3)'
++++++ egrep -o '^[0-9]+\.[0-9]+\.[0-9]+'
+++++ __tbb_tmp_gcc_version=8.3.1
+++++ case "${__tbb_tmp_gcc_version}" in
+++++ __tbb_tmp_lib_dir=gcc4.7
+++++ echo gcc4.7
++++ __tmp_tbb_subdir=/gcc4.7
++++ __tmp_tbb_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
+++ __tbb_path_arch=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ set_ld_library_path intel64_lin /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_target_arch_path=intel64_lin
++++ __tmp_ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ __tmp_tbb_arch_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ __ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ set_library_path intel64_lin /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_target_arch_path=intel64_lin
++++ __tmp_tbb_arch_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ '[' intel64_lin = ia32_lin ']'
++++ __tmp_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ __tmp_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ __library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ set_nls_path intel64_lin
++++ __tmp_target_arch_path=intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N
+++ __nlspath=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N
+++ '[' '' = mod ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ export NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ export CPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ CPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ export PKG_CONFIG_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/bin/pkgconfig
+++ PKG_CONFIG_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/bin/pkgconfig
+++ '[' '' = verbose ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/ipp/bin/ippvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/ippcp/bin/ippcpvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/mpi/intel64/bin/mpivars.sh ']'
++ '[' intel64 = intel64 -o '' = intel64 ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/mpi/intel64/bin/mpivars.sh
+++ I_MPI_ROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi
+++ export I_MPI_ROOT
+++ '[' -z /opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ export PATH
+++ '[' -z '' ']'
+++ CLASSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/mpi.jar
+++ export CLASSPATH
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LD_LIBRARY_PATH
+++ '[' -z '/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
+++ MANPATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ export MANPATH
+++ '[' -z '' ']'
+++ i_mpi_ofi_library_internal=1
+++ i_mpi_library_kind=
+++ '[' 0 -gt 0 ']'
+++ case "$i_mpi_library_kind" in
+++ case "$i_mpi_ofi_library_internal" in
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ export PATH
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LD_LIBRARY_PATH
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin ']'
+++ LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ export LIBRARY_PATH
+++ FI_PROVIDER_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib/prov
+++ export FI_PROVIDER_PATH
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/pkg_bin/compilervars_arch.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/pkg_bin/compilervars_arch.sh intel64 linux
+++ INTEL_INSTALL_DIR_ORIG=
+++ INTEL_NDK_DIR_ORIG=
+++ INSTALL_DIR=/opt/intel/compilers_and_libraries_2019.4.243/linux
+++ NDK_DIR='&lt;NDK_DIR&gt;'
+++ NDK_ARCH=
++++ uname
+++ INTEL_HOST_PLATFORM=Linux
+++ '[' 2 -eq 0 ']'
+++ INTEL_TARGET_ARCH=intel64
+++ INTEL_TARGET_PLATFORM=linux
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ NDK_ARCH=x86_64
+++ '[' -n '' ']'
+++ export PATH
+++ '[' linux = android ']'
+++ unset ICCCFG
+++ unset ICPCCFG
+++ unset ICXCFG
+++ unset ICPXCFG
+++ unset XIARCFG
+++ unset XILDCFG
+++ unset INTEL_USE_ENVIRONMENT
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-9/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-12/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-13/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-14/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-15/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-16/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-17/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-18/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-19/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-21/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-22/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-23/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-24/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-26/arch-x86_64' ']'
+++ '[' -d '&lt;NDK_DIR&gt;/toolchains/x86_64-4.9/prebuilt/linux-x86_64' ']'
+++ '[' Linux = Darwin ']'
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ '[' intel64 = ia32 -a -d /opt/intel/compilers_and_libraries_2019.4.243/linux/mpirt/lib/ia32_lin ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/mic ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/mic/lib ']'
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N ']'
+++ export NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ '[' intel64 = ia32 ']'
+++ '[' -z '' ']'
+++ export INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2019.4.243/linux/licenses:/opt/intel/licenses:/home/jenkins/intel/licenses
+++ INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2019.4.243/linux/licenses:/opt/intel/licenses:/home/jenkins/intel/licenses
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/../../man/common ']'
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
++++ cd /opt/intel/compilers_and_libraries_2019.4.243/linux/../../man/common
++++ pwd
+++ export 'MANPATH=/opt/intel/man/common:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ MANPATH='/opt/intel/man/common:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ '[' -n ']'
+++ INSTALL_DIR=
+++ '[' -n ']'
+++ NDK_DIR=
+++ unset INTEL_INSTALL_DIR_ORIG
+++ unset INTEL_NDK_DIR_ORIG
+ bash -c 'export e3smSource=/home/jenkins/workspace/e3sm_run_test; csh nightly_test/nightly_e3sm_scm_DYCOMSrf01.csh; exit 0'
Compset longname is SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV
Compset specification file is /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/config_compsets.xml
Automatically adding SIAC to compset
Automatically adding SESP to compset
Compset forcing is 
ATM component is cam5 physics:
LND component is clm4.5 physics:clm4.5 Satellite phenology:
ICE component is prescribed cice:
OCN component is DOCN   prescribed ocean mode
ROF component is Stub river component
GLC component is Stub glacier (land ice) component
WAV component is Stub wave component
IAC component is Stub iac component
ESP component is Stub external system processing (ESP) component
Pes     specification file is /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/allactive/config_pesall.xml
Machine is nelson
Pes setting: grid match    is a%ne16np4_ 
Pes setting: grid          is a%ne16np4_l%ne16np4_oi%ne16np4_r%null_g%null_w%null_z%null_m%gx3v7 
Pes setting: compset       is SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SIAC_SESP 
Pes setting: tasks       is {'NTASKS_ATM': 64, 'NTASKS_ICE': 64, 'NTASKS_CPL': 64, 'NTASKS_LND': 64, 'NTASKS_WAV': 64, 'NTASKS_ROF': 64, 'NTASKS_OCN': 64, 'NTASKS_GLC': 64} 
Pes setting: threads     is {'NTHRDS_ICE': 1, 'NTHRDS_ATM': 1, 'NTHRDS_ROF': 1, 'NTHRDS_LND': 1, 'NTHRDS_WAV': 1, 'NTHRDS_OCN': 1, 'NTHRDS_CPL': 1, 'NTHRDS_GLC': 1} 
Pes setting: rootpe      is {'ROOTPE_OCN': 0, 'ROOTPE_LND': 0, 'ROOTPE_ATM': 0, 'ROOTPE_ICE': 0, 'ROOTPE_WAV': 0, 'ROOTPE_CPL': 0, 'ROOTPE_ROF': 0, 'ROOTPE_GLC': 0} 
Pes setting: pstrid      is {} 
Pes other settings: {}
Pes comments: none
 Compset is: SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SIAC_SESP 
 Grid is: a%ne16np4_l%ne16np4_oi%ne16np4_r%null_g%null_w%null_z%null_m%gx3v7 
 Components in compset are: ['cam', 'clm', 'cice', 'docn', 'srof', 'sglc', 'swav', 'siac', 'sesp', 'drv'] 
No charge_account info available, using value from PROJECT
e3sm model version found: c0797a7
Batch_system_type is none
 Creating Case directory /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/case_scripts
ERROR: No variable BASELINE_ROOT found in case
ERROR: No variable CCSM_CPRNC found in case
setting case file to env_batch.xml
ERROR: No queues found
/home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/case_scripts/env_mach_specific.xml already exists, delete to replace
/home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/case_scripts/env_mach_specific.xml already exists, delete to replace
Creating batch scripts
Writing case.run script from input template /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/machines/template.case.run
Creating file .case.run
Writing case.st_archive script from input template /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/machines/template.st_archive
Creating file case.st_archive
Creating file .case.run.sh
Creating user_nl_xxx files for components and cpl
If an old case build already exists, might want to run 'case.build --clean' before building
Generating component namelists as part of setup
Creating component namelists
  2021-07-02 08:59:34 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 08:59:34 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 08:59:34 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 08:59:34 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 08:59:34 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 08:59:34 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 08:59:34 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 08:59:34 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 08:59:34 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 08:59:34 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
You can now run './preview_run' to get more info on how your case will be run
Building case in directory /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/case_scripts
sharedlib_only is False
model_only is False
Generating component namelists as part of build
Creating component namelists
  2021-07-02 08:59:37 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 08:59:37 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 08:59:37 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 08:59:37 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 08:59:37 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 08:59:37 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 08:59:37 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 08:59:37 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 08:59:37 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 08:59:37 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Building gptl with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/gptl.bldlog.210702-085937
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.gptl
Component gptl build complete with 1 warnings
Building mct with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/mct.bldlog.210702-085937
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.mct
Building pio with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/pio.bldlog.210702-085937
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.pio
Building csm_share with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/csm_share.bldlog.210702-085937
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.csm_share
Component csm_share build complete with 4 warnings
         - Building atm Library 
Building atm with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/atm.bldlog.210702-085937
         - Building lnd Library 
Building lnd with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/lnd.bldlog.210702-085937
         - Building ice Library 
         - Building ocn Library 
Building ice with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/ice.bldlog.210702-085937
Building ocn with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/ocn.bldlog.210702-085937
         - Building rof Library 
Building rof with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/rof.bldlog.210702-085937
         - Building glc Library 
Building glc with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/glc.bldlog.210702-085937
         - Building wav Library 
Building wav with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/wav.bldlog.210702-085937
         - Building iac Library 
Building iac with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/iac.bldlog.210702-085937
         - Building esp Library 
Building esp with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/esp.bldlog.210702-085937
swav built in 0.497515 seconds
siac built in 0.499711 seconds
srof built in 0.526363 seconds
sesp built in 0.501364 seconds
sglc built in 0.533672 seconds
docn built in 1.075134 seconds
Component ice build complete with 9 warnings
Component ice build complete with 9 warnings
cice built in 19.879464 seconds
Component atm build complete with 5 warnings
Component lnd build complete with 6 warnings
Component atm build complete with 5 warnings
Component lnd build complete with 6 warnings
cam built in 97.325849 seconds
clm built in 97.325906 seconds
Building e3sm with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/e3sm.bldlog.210702-085937 
Component e3sm exe build complete with 3 warnings
Time spent not building: 1.071250 sec
Time spent building: 144.842728 sec
MODEL BUILD HAS FINISHED SUCCESSFULLY
Creating component namelists
  2021-07-02 09:02:03 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 09:02:03 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 09:02:03 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 09:02:03 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 09:02:03 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 09:02:03 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 09:02:03 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 09:02:03 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 09:02:03 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 09:02:03 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Checking that inputdata is available as part of case submission
Loading input file list: 'Buildconf/cpl.input_data_list'
Loading input file list: 'Buildconf/docn.input_data_list'
Loading input file list: 'Buildconf/clm.input_data_list'
Model clm no file specified for finidat
Loading input file list: 'Buildconf/cam.input_data_list'
Loading input file list: 'Buildconf/cice.input_data_list'
Check case OK
submit_jobs case.run
Submit job case.run
Starting job script case.run
2021-07-02 09:02:04 CASE.RUN BEGINS HERE
2021-07-02 09:02:04 RUN_MODEL BEGINS HERE
2021-07-02 09:02:04 PRE_RUN_CHECK BEGINS HERE
2021-07-02 09:02:04 NAMELIST CREATION BEGINS HERE
Generating namelists for /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/case_scripts
Creating component namelists
  2021-07-02 09:02:04 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 09:02:04 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 09:02:04 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 09:02:04 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 09:02:04 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 09:02:04 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 09:02:04 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 09:02:04 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 09:02:04 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 09:02:04 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
2021-07-02 09:02:04 NAMELIST CREATION HAS FINISHED
-------------------------------------------------------------------------
 - Prestage required restarts into /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/run
 - Case input data directory (DIN_LOC_ROOT) is /home/pub/cam_inputdata 
 - Checking for required input datasets in DIN_LOC_ROOT
-------------------------------------------------------------------------
2021-07-02 09:02:04 PRE_RUN_CHECK HAS FINISHED
run command is /usr/local/mpi/MPICH-3.3.1-gfortran/bin/mpirun  -np 1 -prepend-rank /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_DYCOMSrf01/build/e3sm.exe   &gt;&gt; e3sm.log.$LID 2&gt;&amp;1  
2021-07-02 09:02:04 SAVE_PRERUN_PROVENANCE BEGINS HERE
2021-07-02 09:02:04 SAVE_PRERUN_PROVENANCE HAS FINISHED
2021-07-02 09:02:04 MODEL EXECUTION BEGINS HERE
2021-07-02 09:02:51 MODEL EXECUTION HAS FINISHED
2021-07-02 09:02:51 POST_RUN_CHECK BEGINS HERE
2021-07-02 09:02:51 POST_RUN_CHECK HAS FINISHED
2021-07-02 09:02:51 RUN_MODEL HAS FINISHED
2021-07-02 09:02:51 GET_TIMING BEGINS HERE
2021-07-02 09:02:51 GET_TIMING HAS FINISHED
2021-07-02 09:02:52 SAVE_POSTRUN_PROVENANCE BEGINS HERE
2021-07-02 09:02:52 SAVE_POSTRUN_PROVENANCE HAS FINISHED
check for resubmit
dout_s False 
mach nelson 
resubmit_num 0
2021-07-02 09:02:52 CASE.RUN HAS FINISHED
Submitted job case.run with id None
DYCOMSrf01 was successful.
</span>[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run RICO)
[Pipeline] sh
<span class="pipeline-node-34">+ source /opt/intel/bin/ifortvars.sh intel64
++ PROD_DIR=/opt/intel/compilers_and_libraries_2019/linux
++ INTEL_TARGET_ARCH=
++ INTEL_TARGET_PLATFORM=linux
+++ uname
++ INTEL_HOST_PLATFORM=Linux
++ COMPILERVARS_ARGV=1
++ '[' 1 -eq 0 ']'
++ '[' 1 -gt 0 ']'
++ opt=intel64
++ case $opt in
++ INTEL_TARGET_ARCH=intel64
++ shift
++ '[' 0 -gt 0 ']'
++ '[' intel64 '!=' ia32 -a intel64 '!=' intel64 -o linux '!=' android -a linux '!=' linux -a linux '!=' mac -o Linux = Darwin -a intel64 '!=' intel64 ']'
++ '[' linux = mac ']'
++ '[' 1 -eq 0 ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/daal/bin/daalvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/../../debugger_2019/bin/debuggervars.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/../../debugger_2019/bin/debuggervars.sh intel64
+++ INST=/opt/intel
+++ DIR_DEBUGGER=/opt/intel/debugger_2019
+++ DIR_DOCUMENTATION=/opt/intel/documentation_2019
+++ '[' '!' -d /opt/intel ']'
+++ case "$(uname -sm)" in
++++ uname -sm
+++ DEBUGGERARCH=intel64
+++ '[' -n /opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ case ${PATH} in
+++ '[' -n '' ']'
+++ '[' -n '' ']'
+++ '[' -n en_US.UTF-8 ']'
+++ LANGUAGE_TERRITORY=en_US.UTF-8
+++ case ${LANGUAGE_TERRITORY} in
+++ LANGUAGE_TERRITORY=en
+++ '[' '!' -d /opt/intel/documentation_2019/en/debugger ']'
+++ '[' -d /opt/intel/documentation_2019/en/debugger/gdb-ia ']'
+++ '[' -n '' ']'
+++ GDBINFO=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ '[' -n '' ']'
+++ GDBMAN=/opt/intel/documentation_2019/en/debugger/gdb-ia/man/
+++ '[' -n '' ']'
+++ export NLSPATH=/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ '[' -n /opt/intel/documentation_2019/en/debugger/gdb-ia/info/ ']'
+++ '[' -n '' ']'
+++ export INFOPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ INFOPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/info/
+++ '[' -n /opt/intel/documentation_2019/en/debugger/gdb-ia/man/ ']'
+++ '[' -n '$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
+++ export 'MANPATH=/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ MANPATH='/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ export INTEL_PYTHONHOME=/opt/intel/debugger_2019/python/intel64/
+++ INTEL_PYTHONHOME=/opt/intel/debugger_2019/python/intel64/
+++ '[' -n /opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ export PATH=/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ PATH=/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
++++ uname -s
+++ '[' Linux '!=' Darwin ']'
+++ '[' -d /opt/intel/debugger_2019/libipt/intel64/lib ']'
+++ '[' -n '$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ unset INST DIR_DEBUGGER DIR_DOCUMENTATION DEBUGGERARCH LANGUAGE_TERRITORY GDBINFO GDBMAN
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/tbb/bin/tbbvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/pstl/bin/pstlvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/mkl/bin/mklvars.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/mkl/bin/mklvars.sh intel64
+++ set_mkl_env intel64
+++ CPRO_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux
+++ export MKLROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl
+++ MKLROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl
+++ __mkl_tmp_SCRIPT_NAME=mklvars.sh
+++ __mkl_tmp_MOD_NAME=mod
+++ __mkl_tmp_LP64_ILP64=
+++ __mkl_tmp_MOD=
+++ __mkl_tmp_TARGET_ARCH=
+++ __mkl_tmp_MKLVARS_VERBOSE=
+++ __mkl_tmp_BAD_SWITCH=
+++ '[' -z intel64 ']'
+++ '[' -n intel64 ']'
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ __mkl_tmp_TARGET_ARCH=intel64
+++ shift
+++ '[' -n '' ']'
+++ '[' -n '' ']'
+++ '[' -z intel64 ']'
+++ __compiler_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib
+++ __mkl_lib_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib
+++ __tbb_lib_dir=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib
+++ __cpath=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ __subdir_arch_ia32=ia32_lin
+++ __subdir_arch_intel64=intel64_lin
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ __target_arch_path=intel64_lin
+++ __tbb_path_arch=
+++ '[' -z '' ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib ']'
+++ '[' intel64_lin = ia32_lin ']'
++++ set_tbb_path intel64_lin
++++ __tmp_target_arch_path=intel64_lin
+++++ get_tbb_library_directory
+++++ __tbb_tmp_lib_dir=gcc4.1
+++++ which gcc
+++++ '[' 0 -eq 0 ']'
++++++ gcc --version
++++++ grep gcc
++++++ egrep -o ' [0-9]+\.[0-9]+\.[0-9]+.*'
++++++ sed -e 's/^\ //'
+++++ __tbb_tmp_gcc_version_full='8.3.1 20190311 (Red Hat 8.3.1-3)'
+++++ '[' 0 -eq 0 ']'
++++++ echo '8.3.1 20190311 (Red Hat 8.3.1-3)'
++++++ egrep -o '^[0-9]+\.[0-9]+\.[0-9]+'
+++++ __tbb_tmp_gcc_version=8.3.1
+++++ case "${__tbb_tmp_gcc_version}" in
+++++ __tbb_tmp_lib_dir=gcc4.7
+++++ echo gcc4.7
++++ __tmp_tbb_subdir=/gcc4.7
++++ __tmp_tbb_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
+++ __tbb_path_arch=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ set_ld_library_path intel64_lin /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_target_arch_path=intel64_lin
++++ __tmp_ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ __tmp_tbb_arch_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ __ld_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ set_library_path intel64_lin /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ __tmp_target_arch_path=intel64_lin
++++ __tmp_tbb_arch_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7
++++ '[' intel64_lin = ia32_lin ']'
++++ __tmp_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ __tmp_library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ __library_path=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
++++ set_nls_path intel64_lin
++++ __tmp_target_arch_path=intel64_lin
++++ echo /opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N
+++ __nlspath=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N
+++ '[' '' = mod ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ export NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ export CPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ CPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/include
+++ export PKG_CONFIG_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/bin/pkgconfig
+++ PKG_CONFIG_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/bin/pkgconfig
+++ '[' '' = verbose ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/ipp/bin/ippvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/ippcp/bin/ippcpvars.sh ']'
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/mpi/intel64/bin/mpivars.sh ']'
++ '[' intel64 = intel64 -o '' = intel64 ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/mpi/intel64/bin/mpivars.sh
+++ I_MPI_ROOT=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi
+++ export I_MPI_ROOT
+++ '[' -z /opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ export PATH
+++ '[' -z '' ']'
+++ CLASSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/mpi.jar
+++ export CLASSPATH
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LD_LIBRARY_PATH
+++ '[' -z '/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
+++ MANPATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ export MANPATH
+++ '[' -z '' ']'
+++ i_mpi_ofi_library_internal=1
+++ i_mpi_library_kind=
+++ '[' 0 -gt 0 ']'
+++ case "$i_mpi_library_kind" in
+++ case "$i_mpi_ofi_library_internal" in
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ export PATH
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ export LD_LIBRARY_PATH
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin ']'
+++ LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin
+++ export LIBRARY_PATH
+++ FI_PROVIDER_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib/prov
+++ export FI_PROVIDER_PATH
++ '[' -e /opt/intel/compilers_and_libraries_2019/linux/pkg_bin/compilervars_arch.sh ']'
++ . /opt/intel/compilers_and_libraries_2019/linux/pkg_bin/compilervars_arch.sh intel64 linux
+++ INTEL_INSTALL_DIR_ORIG=
+++ INTEL_NDK_DIR_ORIG=
+++ INSTALL_DIR=/opt/intel/compilers_and_libraries_2019.4.243/linux
+++ NDK_DIR='&lt;NDK_DIR&gt;'
+++ NDK_ARCH=
++++ uname
+++ INTEL_HOST_PLATFORM=Linux
+++ '[' 2 -eq 0 ']'
+++ INTEL_TARGET_ARCH=intel64
+++ INTEL_TARGET_PLATFORM=linux
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin ']'
+++ PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/bin:/opt/intel/debugger_2019/gdb/intel64/bin:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/opt/rh/devtoolset-8/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/bin:/opt/intel/compilers_and_libraries_2019.4.243/linux/bin/intel64:/sbin:/usr/sbin:/bin:/usr/bin
+++ '[' intel64 = ia32 ']'
+++ '[' intel64 = intel64 ']'
+++ NDK_ARCH=x86_64
+++ '[' -n '' ']'
+++ export PATH
+++ '[' linux = android ']'
+++ unset ICCCFG
+++ unset ICPCCFG
+++ unset ICXCFG
+++ unset ICPXCFG
+++ unset XIARCFG
+++ unset XILDCFG
+++ unset INTEL_USE_ENVIRONMENT
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-9/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-12/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-13/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-14/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-15/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-16/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-17/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-18/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-19/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-21/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-22/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-23/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-24/arch-x86_64' ']'
+++ for target in 9 12 13 14 15 16 17 18 19 21 22 23 24 26
+++ '[' -d '&lt;NDK_DIR&gt;/platforms/android-26/arch-x86_64' ']'
+++ '[' -d '&lt;NDK_DIR&gt;/toolchains/x86_64-4.9/prebuilt/linux-x86_64' ']'
+++ '[' Linux = Darwin ']'
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib' ']'
+++ export 'LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ LD_LIBRARY_PATH='/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/libfabric/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib/release:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2019.4.243/linux/tbb/lib/intel64_lin/gcc4.7:/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin:/opt/intel/debugger_2019/libipt/intel64/lib:$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib:/usr/local/NETCDF-Fortran-4.4.5-gfortran/lib:/usr/local/NETCDF-Fortran-4.4.5-ifort/lib:/usr/local/NETCDF-Fortran-4.4.5-pgi/lib:/usr/local/NETCDF-C-4.7.0-gfortran/lib:/usr/local/NETCDF-C-4.7.0-ifort/lib:/usr/local/NETCDF-C-4.7.0-pgi/lib:/usr/local/netcdf-sun64:/opt/intel/lib/intel64:/opt/intel/compilers_and_libraries/linux/mpi/intel64/lib'
+++ '[' intel64 = ia32 -a -d /opt/intel/compilers_and_libraries_2019.4.243/linux/mpirt/lib/ia32_lin ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/mic ']'
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/mic/lib ']'
+++ '[' -z /opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N ']'
+++ export NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ NLSPATH=/opt/intel/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2019.4.243/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2019/gdb/intel64/share/locale/%l_%t/%N
+++ '[' intel64 = ia32 ']'
+++ '[' -z '' ']'
+++ export INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2019.4.243/linux/licenses:/opt/intel/licenses:/home/jenkins/intel/licenses
+++ INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2019.4.243/linux/licenses:/opt/intel/licenses:/home/jenkins/intel/licenses
+++ '[' -d /opt/intel/compilers_and_libraries_2019.4.243/linux/../../man/common ']'
+++ '[' -z '/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man' ']'
++++ cd /opt/intel/compilers_and_libraries_2019.4.243/linux/../../man/common
++++ pwd
+++ export 'MANPATH=/opt/intel/man/common:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ MANPATH='/opt/intel/man/common:/opt/intel/compilers_and_libraries_2019.4.243/linux/mpi/man:/opt/intel/documentation_2019/en/debugger/gdb-ia/man/:$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/compilers/man'
+++ '[' -n ']'
+++ INSTALL_DIR=
+++ '[' -n ']'
+++ NDK_DIR=
+++ unset INTEL_INSTALL_DIR_ORIG
+++ unset INTEL_NDK_DIR_ORIG
+ bash -c 'export e3smSource=/home/jenkins/workspace/e3sm_run_test; csh nightly_test/nightly_e3sm_scm_RICO.csh; exit 0'
Compset longname is SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV
Compset specification file is /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/config_compsets.xml
Automatically adding SIAC to compset
Automatically adding SESP to compset
Compset forcing is 
ATM component is cam5 physics:
LND component is clm4.5 physics:clm4.5 Satellite phenology:
ICE component is prescribed cice:
OCN component is DOCN   prescribed ocean mode
ROF component is Stub river component
GLC component is Stub glacier (land ice) component
WAV component is Stub wave component
IAC component is Stub iac component
ESP component is Stub external system processing (ESP) component
Pes     specification file is /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/allactive/config_pesall.xml
Machine is nelson
Pes setting: grid match    is a%ne16np4_ 
Pes setting: grid          is a%ne16np4_l%ne16np4_oi%ne16np4_r%null_g%null_w%null_z%null_m%gx3v7 
Pes setting: compset       is SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SIAC_SESP 
Pes setting: tasks       is {'NTASKS_ATM': 64, 'NTASKS_ICE': 64, 'NTASKS_CPL': 64, 'NTASKS_LND': 64, 'NTASKS_WAV': 64, 'NTASKS_ROF': 64, 'NTASKS_OCN': 64, 'NTASKS_GLC': 64} 
Pes setting: threads     is {'NTHRDS_ICE': 1, 'NTHRDS_ATM': 1, 'NTHRDS_ROF': 1, 'NTHRDS_LND': 1, 'NTHRDS_WAV': 1, 'NTHRDS_OCN': 1, 'NTHRDS_CPL': 1, 'NTHRDS_GLC': 1} 
Pes setting: rootpe      is {'ROOTPE_OCN': 0, 'ROOTPE_LND': 0, 'ROOTPE_ATM': 0, 'ROOTPE_ICE': 0, 'ROOTPE_WAV': 0, 'ROOTPE_CPL': 0, 'ROOTPE_ROF': 0, 'ROOTPE_GLC': 0} 
Pes setting: pstrid      is {} 
Pes other settings: {}
Pes comments: none
 Compset is: SCAM_CAM5%SCAM_CLM45%SP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SIAC_SESP 
 Grid is: a%ne16np4_l%ne16np4_oi%ne16np4_r%null_g%null_w%null_z%null_m%gx3v7 
 Components in compset are: ['cam', 'clm', 'cice', 'docn', 'srof', 'sglc', 'swav', 'siac', 'sesp', 'drv'] 
No charge_account info available, using value from PROJECT
e3sm model version found: c0797a7
Batch_system_type is none
 Creating Case directory /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/case_scripts
ERROR: No variable BASELINE_ROOT found in case
ERROR: No variable CCSM_CPRNC found in case
setting case file to env_batch.xml
ERROR: No queues found
/home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/case_scripts/env_mach_specific.xml already exists, delete to replace
/home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/case_scripts/env_mach_specific.xml already exists, delete to replace
Creating batch scripts
Writing case.run script from input template /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/machines/template.case.run
Creating file .case.run
Writing case.st_archive script from input template /home/jenkins/workspace/e3sm_run_test/cime/config/e3sm/machines/template.st_archive
Creating file case.st_archive
Creating file .case.run.sh
Creating user_nl_xxx files for components and cpl
If an old case build already exists, might want to run 'case.build --clean' before building
Generating component namelists as part of setup
Creating component namelists
  2021-07-02 09:03:08 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 09:03:08 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 09:03:08 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 09:03:08 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 09:03:08 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 09:03:08 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 09:03:08 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 09:03:08 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 09:03:08 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 09:03:08 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
You can now run './preview_run' to get more info on how your case will be run
Building case in directory /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/case_scripts
sharedlib_only is False
model_only is False
Generating component namelists as part of build
Creating component namelists
  2021-07-02 09:03:11 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 09:03:11 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 09:03:11 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 09:03:11 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 09:03:11 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 09:03:11 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 09:03:11 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 09:03:11 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 09:03:11 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 09:03:11 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Building gptl with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/gptl.bldlog.210702-090311
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.gptl
Component gptl build complete with 1 warnings
Building mct with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/mct.bldlog.210702-090311
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.mct
Building pio with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/pio.bldlog.210702-090311
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.pio
Building csm_share with output to file /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/csm_share.bldlog.210702-090311
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/build_scripts/buildlib.csm_share
Component csm_share build complete with 4 warnings
         - Building atm Library 
Building atm with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/atm.bldlog.210702-090311
         - Building lnd Library 
Building lnd with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/lnd.bldlog.210702-090311
         - Building ice Library 
Building ice with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/ice.bldlog.210702-090311
         - Building ocn Library 
Building ocn with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/ocn.bldlog.210702-090311
         - Building rof Library 
         - Building glc Library 
Building rof with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/rof.bldlog.210702-090311
         - Building wav Library 
Building wav with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/wav.bldlog.210702-090311
         - Building iac Library 
Building glc with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/glc.bldlog.210702-090311
Building iac with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/iac.bldlog.210702-090311
         - Building esp Library 
Building esp with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/esp.bldlog.210702-090311
siac built in 0.462904 seconds
sesp built in 0.475885 seconds
sglc built in 0.492145 seconds
swav built in 0.516251 seconds
srof built in 0.525929 seconds
docn built in 1.025931 seconds
Component ice build complete with 9 warnings
Component ice build complete with 9 warnings
cice built in 20.507319 seconds
Component lnd build complete with 6 warnings
Component lnd build complete with 6 warnings
clm built in 87.544707 seconds
Component atm build complete with 5 warnings
Component atm build complete with 5 warnings
cam built in 97.420149 seconds
Building e3sm with output to /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/e3sm.bldlog.210702-090311 
Component e3sm exe build complete with 3 warnings
Time spent not building: 1.047154 sec
Time spent building: 145.345398 sec
MODEL BUILD HAS FINISHED SUCCESSFULLY
Creating component namelists
  2021-07-02 09:05:37 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 09:05:38 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 09:05:38 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 09:05:38 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 09:05:38 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 09:05:38 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 09:05:38 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 09:05:38 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 09:05:38 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 09:05:38 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Checking that inputdata is available as part of case submission
Loading input file list: 'Buildconf/cpl.input_data_list'
Loading input file list: 'Buildconf/docn.input_data_list'
Loading input file list: 'Buildconf/clm.input_data_list'
Model clm no file specified for finidat
Loading input file list: 'Buildconf/cam.input_data_list'
Loading input file list: 'Buildconf/cice.input_data_list'
Check case OK
submit_jobs case.run
Submit job case.run
Starting job script case.run
2021-07-02 09:05:38 CASE.RUN BEGINS HERE
2021-07-02 09:05:38 RUN_MODEL BEGINS HERE
2021-07-02 09:05:38 PRE_RUN_CHECK BEGINS HERE
2021-07-02 09:05:38 NAMELIST CREATION BEGINS HERE
Generating namelists for /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/case_scripts
Creating component namelists
  2021-07-02 09:05:38 atm
   Calling /home/jenkins/workspace/e3sm_run_test/components/cam/cime_config/buildnml
  2021-07-02 09:05:38 lnd
   Calling /home/jenkins/workspace/e3sm_run_test/components/clm/cime_config/buildnml
  2021-07-02 09:05:39 ice
   Calling /home/jenkins/workspace/e3sm_run_test/components/cice/cime_config/buildnml
  2021-07-02 09:05:39 ocn
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/data_comps/docn/cime_config/buildnml
  2021-07-02 09:05:39 rof
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/srof/cime_config/buildnml
  2021-07-02 09:05:39 glc
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sglc/cime_config/buildnml
  2021-07-02 09:05:39 wav
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/swav/cime_config/buildnml
  2021-07-02 09:05:39 iac
   Running /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/siac/cime_config/buildnml 
  2021-07-02 09:05:39 esp
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/components/stub_comps/sesp/cime_config/buildnml
  2021-07-02 09:05:39 cpl
   Calling /home/jenkins/workspace/e3sm_run_test/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
2021-07-02 09:05:39 NAMELIST CREATION HAS FINISHED
-------------------------------------------------------------------------
 - Prestage required restarts into /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/run
 - Case input data directory (DIN_LOC_ROOT) is /home/pub/cam_inputdata 
 - Checking for required input datasets in DIN_LOC_ROOT
-------------------------------------------------------------------------
2021-07-02 09:05:39 PRE_RUN_CHECK HAS FINISHED
run command is /usr/local/mpi/MPICH-3.3.1-gfortran/bin/mpirun  -np 1 -prepend-rank /home/jenkins/workspace/e3sm_run_test/projects/scratch/SCM_runs/test_RICO/build/e3sm.exe   &gt;&gt; e3sm.log.$LID 2&gt;&amp;1  
2021-07-02 09:05:39 SAVE_PRERUN_PROVENANCE BEGINS HERE
2021-07-02 09:05:39 SAVE_PRERUN_PROVENANCE HAS FINISHED
2021-07-02 09:05:39 MODEL EXECUTION BEGINS HERE
2021-07-02 09:06:26 MODEL EXECUTION HAS FINISHED
2021-07-02 09:06:26 POST_RUN_CHECK BEGINS HERE
2021-07-02 09:06:26 POST_RUN_CHECK HAS FINISHED
2021-07-02 09:06:26 RUN_MODEL HAS FINISHED
2021-07-02 09:06:26 GET_TIMING BEGINS HERE
2021-07-02 09:06:26 GET_TIMING HAS FINISHED
2021-07-02 09:06:26 SAVE_POSTRUN_PROVENANCE BEGINS HERE
2021-07-02 09:06:26 SAVE_POSTRUN_PROVENANCE HAS FINISHED
check for resubmit
dout_s False 
mach nelson 
resubmit_num 0
2021-07-02 09:06:26 CASE.RUN HAS FINISHED
Submitted job case.run with id None
RICO was successful.
</span>[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] cleanWs
<span class="pipeline-node-41">[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
</span>[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS