Started by an SCM change394ebbe8662d74aaeb06f853280849b84c54d47edc2ebbe8662d74aaeb06f853280849b84c54d47edc2refs/remotes/origin/masterebbe8662d74aaeb06f853280849b84c54d47edc2ebbe8662d74aaeb06f853280849b84c54d47edc2refs/remotes/origin/masterebbe8662d74aaeb06f853280849b84c54d47edc2ebbe8662d74aaeb06f853280849b84c54d47edc2refs/remotes/origin/masterhttps://github.com/larson-group/clubb.githttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_timestep_gfortran_tests/detail/clubb_timestep_gfortran_tests/394/artifactshttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_timestep_gfortran_tests/detail/clubb_timestep_gfortran_tests/394/changeshttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_timestep_gfortran_tests/detail/clubb_timestep_gfortran_tests/394/http://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_timestep_gfortran_tests/detail/clubb_timestep_gfortran_tests/394/testsfalsefalse#394826876596301clubb_timestep_gfortran_tests #394394false3943796SUCCESS1729152786494http://carson.math.uwm.edu/jenkins/job/clubb_timestep_gfortran_tests/394/input/case_setups/cloud_feedback_s6_p2k_model.ininput/case_setups/cgils_s12_model.ininput/case_setups/mc3e_model.insrc/CLUBB_core/output_netcdf.F90input/case_setups/cgils_s6_model.ininput/case_setups/cobra_model.ininput/case_setups/arm_97_model.insrc/G_unit_test_types/pdf_parameter_tests.F90input/case_setups/lba_model.ininput/case_setups/atex_model.ininput/case_setups/gabls3_model.insrc/CLUBB_core/parameters_tunable.F90input/case_setups/nov11_altocu_model.ininput/case_setups/mpace_b_silhs_model.ininput/case_setups/dycoms2_rf02_nd_model.LR.ininput/case_setups/rico_silhs_model.insrc/SILHS/latin_hypercube_driver_module.F90input/case_setups/mpace_a_model.ininput/case_setups/cgils_s11_model.insrc/input_netcdf.F90input/case_setups/cloud_feedback_s11_model.ininput/case_setups/mpace_b_model.ininput/case_setups/dycoms2_rf02_so_model.LR.inrun_scripts/create_multi_col_params.pyinput/case_setups/dycoms2_rf02_ds_model.HR.insrc/CLUBB_core/clubb_api_module.F90input/case_setups/dycoms2_rf02_do_model.HR.ininput/tunable_parameters_Lscale/configurable_model_flags.ininput/case_setups/arm_0003_model.ininput/case_setups/dycoms2_rf02_so_model.ininput/tunable_parameters/configurable_model_flags.ininput/case_setups/astex_a209_model.ininput/case_setups/dycoms2_rf02_do_model.LR.ininput/case_setups/bomex_model.ininput/case_setups/dycoms2_rf01_model.ininput/case_setups/dycoms2_rf02_so_model.HR.ininput/case_setups/cloud_feedback_s12_model.ininput/case_setups/dycoms2_rf02_ds_model.ininput/case_setups/gabls2_model.ininput/case_setups/cgils_s6_p2k_model.ininput/case_setups/rico_model.ininput/case_setups/cloud_feedback_s6_model.ininput/case_setups/arm_model.ininput/case_setups/neutral_model.insrc/clubb_standalone.F90input/case_setups/twp_ice_model.insrc/CLUBB_core/stats_clubb_utilities.F90run_scripts/check_multicol_error.pyinput/case_setups/READMEinput/grid/READMEinput/case_setups/clex9_nov02_model.ininput/case_setups/jun25_altocu_model.insrc/G_unit_test_types/spurious_source_test.F90input/case_setups/fire_model.insrc/SILHS/silhs_api_module.F90input/case_setups/arm_3year_model.ininput/case_setups/cloud_feedback_s12_p2k_model.ininput/case_setups/cloud_feedback_s11_p2k_model.ininput/case_setups/dycoms2_rf02_nd_model.HR.insrc/clubb_thread_test.F90jenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfileinput/case_setups/dycoms2_rf02_do_model.insrc/jacobian.F90input/case_setups/dycoms2_rf02_morr_model.insrc/clubb_driver.F90input/case_setups/dycoms2_rf02_nd_model.insrc/sounding.F90src/clubb_model_settings.F90READMErun_scripts/test_monoflux_limiter_GPU.pyinput/case_setups/cgils_s11_p2k_model.ininput/case_setups/dycoms2_rf02_ds_model.LR.ininput/case_setups/cgils_s12_p2k_model.insrc/error.F90run_scripts/check_multi_col_error.pyinput/case_setups/gabls3_night_model.ininput/case_setups/clex9_oct14_model.ininput/case_setups/wangara_model.ininput/case_setups/dycoms2_rf01_fixed_sst_model.inebbe8662d74aaeb06f853280849b84c54d47edc21729133670000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMulticol CLUBB (#1193) * Adding column loop to run_clubb * Lot more changes * Adding multicolumn output support and improving stats code. * Conditionally closing stats files. This is just a bug fix. I'm not sure how this ever worked without the conditionals. * Improvements and some cleanup. * Bug fix * Merge with master * Removing num_standalone_columns, it's no longer needed. * Changes to make CPU vs GPU test work with new multicol mode. Columns now run with different parameter sets, tolerance script checks average diff instead, increasing number of cobra timestep run, removing mpace_b because it turns out that cobra has ice and is capable of detecting the same ice code errors that mpace_b was added to test. * Jenkins script update * Jenkins script update * Jenkins script update * Jenkins script update * Jenkins script update * Jenkins script update * Tightening tolerance * Script cleanup and improvement * Some more slight changes and cleanup. Making monoflux script work with new multicol mode. * Small bug fix that was breaking bugsrad when using multiple columns. * Bug fix to script * Small cleanup and renaming of read_parameters * Slight update to ifdef NETCDF statement * Better change to ifdefs * Adding new name init_read_clubb_params_api to public api list * Name changes and adding section in README * Renaming script * Renaming script * Removing C1 from list of variables to change, it was breaking the CPU vs GPU test, and also clubb warns that 'l_damp_wp2_using_em = T requires C1=C14 and l_stability_correct_tau_zm = F', so perhaps chaning it is just unstable. I've confirmed that GPU bugs are still dectable though. 2024-10-16 21:54:30 -0500ebbe8662d74aaeb06f853280849b84c54d47edc2Multicol CLUBB (#1193)editinput/case_setups/arm_97_model.ineditsrc/G_unit_test_types/pdf_parameter_tests.F90editinput/case_setups/arm_0003_model.ineditrun_scripts/test_monoflux_limiter_GPU.pyeditsrc/G_unit_test_types/spurious_source_test.F90editsrc/input_netcdf.F90editinput/case_setups/dycoms2_rf02_do_model.LR.ineditinput/case_setups/READMEeditinput/case_setups/mc3e_model.ineditsrc/SILHS/latin_hypercube_driver_module.F90editsrc/jacobian.F90editinput/case_setups/cloud_feedback_s6_p2k_model.ineditinput/tunable_parameters_Lscale/configurable_model_flags.ineditsrc/sounding.F90editinput/case_setups/arm_model.ineditinput/case_setups/dycoms2_rf02_ds_model.HR.ineditsrc/CLUBB_core/clubb_api_module.F90editinput/case_setups/dycoms2_rf02_ds_model.LR.inaddrun_scripts/check_multi_col_error.pyeditinput/case_setups/lba_model.ineditinput/case_setups/cloud_feedback_s6_model.ineditinput/grid/READMEeditinput/case_setups/dycoms2_rf02_morr_model.ineditinput/case_setups/gabls2_model.ineditsrc/clubb_driver.F90editinput/case_setups/neutral_model.ineditsrc/SILHS/silhs_api_module.F90editinput/case_setups/cloud_feedback_s11_p2k_model.ineditinput/case_setups/dycoms2_rf02_so_model.ineditinput/case_setups/atex_model.ineditinput/case_setups/bomex_model.ineditsrc/clubb_standalone.F90editinput/case_setups/dycoms2_rf02_ds_model.ineditinput/case_setups/dycoms2_rf02_so_model.LR.ineditinput/case_setups/jun25_altocu_model.inaddrun_scripts/create_multi_col_params.pyeditsrc/CLUBB_core/output_netcdf.F90editinput/case_setups/dycoms2_rf02_nd_model.HR.ineditinput/case_setups/cgils_s6_p2k_model.ineditinput/case_setups/cloud_feedback_s12_p2k_model.ineditinput/case_setups/cgils_s11_model.ineditsrc/CLUBB_core/stats_clubb_utilities.F90editjenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfileeditinput/case_setups/cloud_feedback_s11_model.ineditinput/tunable_parameters/configurable_model_flags.ineditinput/case_setups/cgils_s12_model.ineditinput/case_setups/cgils_s6_model.ineditinput/case_setups/arm_3year_model.ineditinput/case_setups/clex9_oct14_model.ineditinput/case_setups/twp_ice_model.ineditinput/case_setups/astex_a209_model.ineditinput/case_setups/dycoms2_rf02_do_model.HR.ineditinput/case_setups/fire_model.ineditinput/case_setups/dycoms2_rf02_nd_model.ineditinput/case_setups/mpace_b_silhs_model.ineditinput/case_setups/cgils_s12_p2k_model.ineditinput/case_setups/gabls3_night_model.ineditinput/case_setups/rico_silhs_model.ineditinput/case_setups/dycoms2_rf01_model.ineditinput/case_setups/dycoms2_rf02_nd_model.LR.ineditinput/case_setups/cobra_model.ineditinput/case_setups/nov11_altocu_model.ineditinput/case_setups/rico_model.ineditinput/case_setups/wangara_model.ineditsrc/error.F90editsrc/clubb_thread_test.F90editinput/case_setups/dycoms2_rf01_fixed_sst_model.ineditinput/case_setups/dycoms2_rf02_so_model.HR.ineditinput/case_setups/gabls3_model.ineditsrc/CLUBB_core/parameters_tunable.F90editinput/case_setups/cgils_s11_p2k_model.ineditinput/case_setups/clex9_nov02_model.ineditinput/case_setups/cloud_feedback_s12_model.ineditREADMEeditinput/case_setups/dycoms2_rf02_do_model.ineditinput/case_setups/mpace_a_model.indeleterun_scripts/check_multicol_error.pyeditsrc/clubb_model_settings.F90editinput/case_setups/mpace_b_model.ingithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreplyfalseStarted by an SCM change395a6aa9ae31e872d9df8b7770516f69422936c38bda6aa9ae31e872d9df8b7770516f69422936c38bdrefs/remotes/origin/mastera6aa9ae31e872d9df8b7770516f69422936c38bda6aa9ae31e872d9df8b7770516f69422936c38bdrefs/remotes/origin/mastera6aa9ae31e872d9df8b7770516f69422936c38bda6aa9ae31e872d9df8b7770516f69422936c38bdrefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#395813545596301clubb_timestep_gfortran_tests #395395false3953860SUCCESS1729239190703http://carson.math.uwm.edu/jenkins/job/clubb_timestep_gfortran_tests/395/utilities/sens_matrix/set_up_dashboard_inputs.pyutilities/sens_matrix/sens_matrix_dashboard.pyutilities/sens_matrix/create_figs.py3229e98fa9771ddc209046f4fdd0d227625f1a421729183500000http://carson.math.uwm.edu/jenkins/user/vlarsonVince Larsonvlarson@uwm.eduQuadTune: Revise PCA biplot and clarify how variables are masked. For #910. 2024-10-17 11:45:00 -05003229e98fa9771ddc209046f4fdd0d227625f1a42QuadTune: Revise PCA biplot and clarify how variables are masked.editutilities/sens_matrix/set_up_dashboard_inputs.pyeditutilities/sens_matrix/sens_matrix_dashboard.pyeditutilities/sens_matrix/create_figs.pyrun_scripts/READMErun_scripts/run_bindiff_w_flags.py.gitignorerun_scripts/run_scm.bashrun_scripts/run_bindiff_w_flags_config_example.jsona6aa9ae31e872d9df8b7770516f69422936c38bd1729197384000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comadd run_bindiff_w_flags.py script. #1181 pull request #1194 * create script to test bindiff for many different flag settings and add some flags to the run_scm.bash script * add script to compile from github and add changes to bindiff script * add final changes to run_scm_w_bindiff.py script and add example flag config file * rewrite script and add documentation to readme * remove unused script and add doc to run_bindiff_w_flags.py script * add documentation to script and refactor to stay under 100 characters per line 2024-10-17 15:36:24 -0500a6aa9ae31e872d9df8b7770516f69422936c38bdadd run_bindiff_w_flags.py script. #1181 pull request #1194editrun_scripts/READMEeditrun_scripts/run_scm.bashaddrun_scripts/run_bindiff_w_flags_config_example.jsonaddrun_scripts/run_bindiff_w_flags.pyedit.gitignoregithttp://carson.math.uwm.edu/jenkins/user/vlarsonVince Larsonhttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse396http://carson.math.uwm.edu/jenkins/job/clubb_timestep_gfortran_tests/396/394http://carson.math.uwm.edu/jenkins/job/clubb_timestep_gfortran_tests/394/Started by an SCM change393063ae17fdafd9d13795c90b7e5ab538ef736a04c063ae17fdafd9d13795c90b7e5ab538ef736a04crefs/remotes/origin/master063ae17fdafd9d13795c90b7e5ab538ef736a04c063ae17fdafd9d13795c90b7e5ab538ef736a04crefs/remotes/origin/master063ae17fdafd9d13795c90b7e5ab538ef736a04c063ae17fdafd9d13795c90b7e5ab538ef736a04crefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#393842004596301clubb_timestep_gfortran_tests #393393false3933732SUCCESS1729066387359http://carson.math.uwm.edu/jenkins/job/clubb_timestep_gfortran_tests/393/postprocessing/pyplotgen/src/ContourPanel.pypostprocessing/pyplotgen/src/Panel.pypostprocessing/pyplotgen/src/AnimationPanel.pypostprocessing/pyplotgen/src/DataReader.pypostprocessing/pyplotgen/src/VariableGroup.py063ae17fdafd9d13795c90b7e5ab538ef736a04c1729032084000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comAdded rcm-background to pyplotgen animations (#1195) * Fixed ContourPanel and added rcm background to AnimationPanel in pyplotgen CLUBB ticket #1164 * Fixed super call, adjusted super call in ContourPanel, and left a comment describing the issue with the 4 new arguments * Added rcm background to animations * Also, fixed small bug in DataReader. __getStartEndIndex__ 2024-10-15 17:41:24 -0500063ae17fdafd9d13795c90b7e5ab538ef736a04cAdded rcm-background to pyplotgen animations (#1195)editpostprocessing/pyplotgen/src/AnimationPanel.pyeditpostprocessing/pyplotgen/src/ContourPanel.pyeditpostprocessing/pyplotgen/src/VariableGroup.pyeditpostprocessing/pyplotgen/src/DataReader.pyeditpostprocessing/pyplotgen/src/Panel.pygithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse394http://carson.math.uwm.edu/jenkins/job/clubb_timestep_gfortran_tests/394/392http://carson.math.uwm.edu/jenkins/job/clubb_timestep_gfortran_tests/392/