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#350</fullDisplayName><id>350</id><keepLog>false</keepLog><number>350</number><queueId>131</queueId><result>SUCCESS</result><timestamp>1719994389150</timestamp><url>http://carson.math.uwm.edu/jenkins/job/clubb_timestep_gfortran_tests/350/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xm_wpxp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_helper_module.F90</affectedPath><affectedPath>src/G_unit_test_types/spurious_source_test.F90</affectedPath><affectedPath>src/CLUBB_core/mixing_length.F90</affectedPath><commitId>e3a10e0ff494ca2a57b5895f5ab8cb40b45e7036</commitId><timestamp>1719948922000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Ri_zm calc (Part 2) - Move the brunt_vaisala smoothing into calc_brunt_vaisala_freq_sqd (#1156)

CLUBB ticket #1145

Includes previous steps:
* First step: Move call to calc_bv
* Ri_zm calc (Part 1.5) - Adjusted signature of diagnose_Lscale_from_tau #1145

Newest changes: Ri_zm calc (Part 2) - Move brunt_vaisala smoothing into calc_brunt_vaisala_freq_sqd

`brunt_vaisala_frq_sqd_smth` is now calculated in subroutine `calc_brunt_vaisala_freq_sqd` and it is now written to disk in `advance_clubb_core` with all the other `brunt_vaisala` variables.

Unfortunately, I had to make a couple more changes since moving this calculation into `calc_brunt_vaisala_freq_sqd` meant that any subroutine involved in calling `calc_stability_correction` would need to get `l_modify_limiters_for_cnvg_test` fed in, because `calc_brunt_vaisala_freq_sqd` is also called in `calc_stability_correction`.

This commit is BIT_CHANGING since `brunt_vaisala_frq_sqd_smth` used to be all zeros before this change in Lscale mode and now it is actually calculated. BFB in taus code.
</comment><date>2024-07-02 14:35:22 -0500</date><id>e3a10e0ff494ca2a57b5895f5ab8cb40b45e7036</id><msg>Ri_zm calc (Part 2) - Move the brunt_vaisala smoothing into calc_brunt_vaisala_freq_sqd (#1156)</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_helper_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mixing_length.F90</file></path><path><editType>edit</editType><file>src/G_unit_test_types/spurious_source_test.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>compile/config/linux_x86_64_nvhpc.bash</affectedPath><affectedPath>jenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfile</affectedPath><affectedPath>compile/config/linux_x86_64_nvhpc_gpu_openmp.bash</affectedPath><affectedPath>compile/config/linux_x86_64_nvhpc_gpu_openacc.bash</affectedPath><commitId>40d301330e9263c649c014bcae7e371829f42ac8</commitId><timestamp>1719958353000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Testing the new module system with our GPU diffness test. See https://github.com/larson-group/sys_admin/issues/829
</comment><date>2024-07-02 17:12:33 -0500</date><id>40d301330e9263c649c014bcae7e371829f42ac8</id><msg>Testing the new module system with our GPU diffness test. See https://github.com/larson-group/sys_admin/issues/829</msg><path><editType>edit</editType><file>compile/config/linux_x86_64_nvhpc.bash</file></path><path><editType>edit</editType><file>compile/config/linux_x86_64_nvhpc_gpu_openacc.bash</file></path><path><editType>edit</editType><file>jenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfile</file></path><path><editType>edit</editType><file>compile/config/linux_x86_64_nvhpc_gpu_openmp.bash</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfile</affectedPath><commitId>a166adc53620547cc0858fc77d0ab03095fcce70</commitId><timestamp>1719960091000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>The module system is setup via paths in /etc/profile.d/larson-group.sh, so we need to source it. https://github.com/larson-group/sys_admin/issues/829
</comment><date>2024-07-02 17:41:31 -0500</date><id>a166adc53620547cc0858fc77d0ab03095fcce70</id><msg>The module system is setup via paths in /etc/profile.d/larson-group.sh, so we need to source it. https://github.com/larson-group/sys_admin/issues/829</msg><path><editType>edit</editType><file>jenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfile</affectedPath><commitId>bff26070fff07143dd27206fd332f3ccbfc2556b</commitId><timestamp>1719960388000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Fixing bug in jenkinsfiles.
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updates (#1158)

* Initial changes to get code working with the new spack+module system. See https://github.com/larson-group/sys_admin/issues/829

* Changes for restart_gfortran_test

* Possible fix for tuning test

* Part 2 to tuning test fix. It's unclear why the recent change caused top level directory for these stages to be in clubb, rather than the parent directory. Perhaps it has to do with the triple quote

* Adding the mkl flag back to intel config scripts. It's still usable when adding -m or --mkl_lapack to our compile script call, and now we have intel-oneapi-mkl installed because wrf needs it.
</comment><date>2024-07-10 12:53:19 -0500</date><id>05c2978bb4fb2b7ec8e58ce73ff99ed7f94c3e32</id><msg>Spack updates 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_class='hudson.plugins.git.GitChangeSet'><affectedPath>utilities/sens_matrix/set_up_dashboard_inputs.py</affectedPath><commitId>5341e1136aef41c3a2687944a2a42e68ac9dc66f</commitId><timestamp>1719881840000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/vlarson</absoluteUrl><fullName>Vince Larson</fullName></author><authorEmail>vlarson@uwm.edu</authorEmail><comment>QuadTune: Feeds in 20degree_CAM_TAUS_202404 runs.

For #910.
</comment><date>2024-07-01 19:57:20 -0500</date><id>5341e1136aef41c3a2687944a2a42e68ac9dc66f</id><msg>QuadTune: Feeds in 20degree_CAM_TAUS_202404 runs.</msg><path><editType>delete</editType><file>utilities/sens_matrix/set_up_dashboard_inputs.py</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>utilities/sens_matrix/set_up_dashboard_inputs.py</affectedPath><affectedPath>utilities/sens_matrix/create_figs.py</affectedPath><commitId>c26a54de4f25c01f48a95e30d806400e7772c2bc</commitId><timestamp>1719882061000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/vlarson</absoluteUrl><fullName>Vince Larson</fullName></author><authorEmail>vlarson@uwm.edu</authorEmail><comment>QuadTune: Feeds in 20degree_CAM_TAUS_2020404, take 2.

For #910.
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