Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv,
netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ ./compile.py -debug
-- Compiling with double precision
-- SUCCESS: netcdf-fortran found.
-- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so
-- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include
-- Configuring done
-- Generating done
-- Build files have been written to: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/build/gcc_DEBUG_PRECdouble
Using inferred toolchain file: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/cmake/toolchains/linux_x86_64_gcc.cmake
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/build/gcc_DEBUG_PRECdouble
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble
about to cmnake /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/build/gcc_DEBUG_PRECdouble
Running CMake configure...
[1/24] Building Fortran preprocessed src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90-pp.f90
[2/24] Building Fortran preprocessed src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/code_timer_module.F90-pp.f90
[3/24] Building Fortran preprocessed src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90-pp.f90
[4/24] Building Fortran preprocessed src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90-pp.f90
[5/24] Building Fortran preprocessed src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90-pp.f90
[6/24] Generating Fortran dyndep file src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Fortran.dd
[7/44] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/code_timer_module.F90.o
[8/44] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90.o
[9/24] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a
[10/24] Generating Fortran dyndep file src/Microphys/CMakeFiles/microphys_lib.dir/Fortran.dd
[11/24] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o
[12/24] Linking Fortran static library src/Microphys/libmicrophys_lib.a
[13/24] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd
[14/25] Linking Fortran executable src/G_unit_tests
[15/25] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o
[16/25] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o
[17/25] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_loss_driver.F90.o
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver.F90:255:28:
255 | is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) )
| 1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
[18/25] Linking Fortran static library src/libclubb_driver_lib.a
[19/32] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o
[20/32] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o
[21/32] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o
[22/32] Building Fortran object src/CMakeFiles/clubb_standalone_loss.dir/clubb_standalone_loss.F90.o
[23/32] Linking Fortran executable src/clubb_thread_test
[24/32] Linking Fortran executable src/clubb_standalone
[25/32] Linking Fortran executable src/clubb_standalone_loss
[26/32] Building Fortran object src/CMakeFiles/clubb_loss_driver_test.dir/clubb_loss_driver_test.F90.o
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:273:14:
273 | if ( any( test_scaled_rmse /= reference_scaled_rmse ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:278:14:
278 | if ( any( test_correlation /= reference_correlation ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:283:14:
283 | if ( any( test_std_ratio /= reference_std_ratio ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:288:14:
288 | if ( any( test_centered_rmse_norm /= reference_centered_rmse_norm ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:293:14:
293 | if ( any( test_bias_norm /= reference_bias_norm ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:512:14:
512 | if ( any( clubb_params_all_1 /= clubb_params_all_2 ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:521:14:
521 | any( reinit_bias_norm_1 /= reinit_bias_norm_2 ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:520:14:
520 | any( reinit_centered_rmse_norm_1 /= reinit_centered_rmse_norm_2 ) .or. &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:519:14:
519 | any( reinit_std_ratio_1 /= reinit_std_ratio_2 ) .or. &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:518:14:
518 | any( reinit_correlation_1 /= reinit_correlation_2 ) .or. &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:517:14:
517 | if ( any( reinit_scaled_rmse_1 /= reinit_scaled_rmse_2 ) .or. &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:431:14:
431 | if ( all( tweaked_scaled_rmse == reference_scaled_rmse ) ) then
| 1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:371:14:
371 | any( manual_bias_norm_2 /= manual_bias_norm_1 ) ) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:370:14:
370 | any( manual_centered_rmse_norm_2 /= manual_centered_rmse_norm_1 ) .or. &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:369:14:
369 | any( manual_std_ratio_2 /= manual_std_ratio_1 ) .or. &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:368:14:
368 | any( manual_correlation_2 /= manual_correlation_1 ) .or. &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver_test.F90:367:14:
367 | if ( any( manual_scaled_rmse_2 /= manual_scaled_rmse_1 ) .or. &
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
[27/32] Linking Fortran executable src/clubb_driver_test
[28/32] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o
[29/31] Linking Fortran executable src/clubb_loss_driver_test
[30/31] Linking Fortran executable src/clubb_tuner
[30/31] Install the project...
-- Install configuration: "Debug"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
CLUBBStandardsCheck.py: beginning check on src
PASS: 0 checks failed for src
CLUBBStandardsCheck.py: beginning check on src/CLUBB_core
PASS: 0 checks failed for src/CLUBB_core
CLUBBStandardsCheck.py: beginning check on src/SILHS
PASS: 0 checks failed for src/SILHS
CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases
PASS: 0 checks failed for src/Benchmark_cases
CLUBBStandardsCheck.py: beginning check on src/Radiation
PASS: 0 checks failed for src/Radiation
CLUBBStandardsCheck.py: beginning check on src/Microphys
PASS: 0 checks failed for src/Microphys
CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys
PASS: 0 checks failed for src/Microphys/KK_microphys
CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types
[92mBuild completed successfully, and all source code checks passed.[0m
