Status
Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl,
netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ ./compile.py -debug
-- Compiling with double precision
-- SUCCESS: netcdf-fortran found.
--   -> Library : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib/libnetcdff.so
--   -> Modules : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/include
-- Configuring done
-- Generating done
-- Build files have been written to: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/build/gcc_DEBUG_PRECdouble
Using inferred toolchain file: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/cmake/toolchains/linux_x86_64_gcc.cmake
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/build/gcc_DEBUG_PRECdouble
Setting CLUBB installation dir: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble
about to cmnake /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/build/gcc_DEBUG_PRECdouble
Running CMake configure...
Scanning dependencies of target clubb_lapack_shared
Scanning dependencies of target scm_activation_lib
Scanning dependencies of target clubb_lapack_double
[  1%] Built target clubb_lapack_shared
Scanning dependencies of target clubb_lapack_single
[ 19%] Built target clubb_lapack_double
[ 19%] Built target scm_activation_lib
[ 36%] Built target clubb_lapack_single
[ 36%] Built target lapack_lib
Scanning dependencies of target clubb_core_lib
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameters_tunable.F90.o
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/CLUBB_core/parameters_tunable.F90:1822:30:

 1822 |   subroutine unpack_parameters &
      |                              ^
Warning: 'unpack_parameters' defined but not used [-Wunused-function]
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o
[ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o
[ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/numerical_check.F90.o
[ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o
[ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o
[ 39%] Linking Fortran static library libclubb_core_lib.a
[ 51%] Built target clubb_core_lib
Scanning dependencies of target text_writer_lib
Scanning dependencies of target bugsrad_lib
Scanning dependencies of target microphys_utils_lib
[ 52%] Built target text_writer_lib
Scanning dependencies of target coamps_lib
[ 52%] Built target microphys_utils_lib
[ 62%] Built target coamps_lib
[ 67%] Built target bugsrad_lib
Scanning dependencies of target morrison_microphys_lib
Scanning dependencies of target KK_microphys_lib
[ 67%] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o
[ 71%] Built target KK_microphys_lib
Scanning dependencies of target silhs_lib
[ 74%] Built target silhs_lib
Scanning dependencies of target numerical_recipes_lib
Scanning dependencies of target radiation_lib
[ 77%] Built target numerical_recipes_lib
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o
[ 77%] Linking Fortran static library libradiation_lib.a
[ 79%] Built target radiation_lib
Scanning dependencies of target input_fields_lib
[ 82%] Built target input_fields_lib
Scanning dependencies of target G_unit_test_lib
Scanning dependencies of target benchmark_cases_lib
[ 82%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o
[ 82%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o
[ 82%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o
[ 82%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o
[ 82%] Linking Fortran static library libbenchmark_cases_lib.a
[ 89%] Built target benchmark_cases_lib
[ 89%] Linking Fortran static library libG_unit_test_lib.a
[ 92%] Built target G_unit_test_lib
[ 92%] Linking Fortran static library libmorrison_microphys_lib.a
[ 92%] Built target morrison_microphys_lib
Scanning dependencies of target microphys_lib
[ 92%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o
[ 93%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o
[ 93%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o
[ 94%] Linking Fortran static library libmicrophys_lib.a
[ 96%] Built target microphys_lib
Scanning dependencies of target G_unit_tests
Scanning dependencies of target clubb_driver_lib
[ 97%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o
[ 97%] Linking Fortran executable G_unit_tests
[ 97%] Built target G_unit_tests
[ 97%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o
[ 97%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_loss_driver.F90.o
/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/src/clubb_loss_driver.F90:255:28:

  255 |     is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) )
      |                            1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
[ 97%] Linking Fortran static library libclubb_driver_lib.a
[ 97%] Built target clubb_driver_lib
Scanning dependencies of target clubb_standalone
Scanning dependencies of target clubb_thread_test
Scanning dependencies of target clubb_driver_test
Scanning dependencies of target clubb_standalone_loss
Scanning dependencies of target clubb_loss_driver_test
Scanning dependencies of target clubb_tuner
[ 97%] Linking Fortran executable clubb_standalone
[ 97%] Linking Fortran executable clubb_thread_test
[ 97%] Linking Fortran executable clubb_driver_test
[ 97%] Linking Fortran executable clubb_loss_driver_test
[ 97%] Linking Fortran executable clubb_standalone_loss
[ 98%] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o
[ 98%] Built target clubb_thread_test
[ 99%] Built target clubb_loss_driver_test
[100%] Built target clubb_standalone_loss
[100%] Linking Fortran executable clubb_tuner
[100%] Built target clubb_driver_test
[100%] Built target clubb_standalone
[100%] Built target clubb_tuner
Install the project...
-- Install configuration: "Debug"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_stats_output_consistency_gfortran_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
CLUBBStandardsCheck.py: beginning check on src
PASS: 0 checks failed for src
CLUBBStandardsCheck.py: beginning check on src/CLUBB_core
PASS: 0 checks failed for src/CLUBB_core
CLUBBStandardsCheck.py: beginning check on src/SILHS
PASS: 0 checks failed for src/SILHS
CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases
PASS: 0 checks failed for src/Benchmark_cases
CLUBBStandardsCheck.py: beginning check on src/Radiation
PASS: 0 checks failed for src/Radiation
CLUBBStandardsCheck.py: beginning check on src/Microphys
PASS: 0 checks failed for src/Microphys
CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys
PASS: 0 checks failed for src/Microphys/KK_microphys
CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types

[92mBuild completed successfully, and all source code checks passed.[0m