Started by an SCM change
Obtained jenkins_tests/clubb_release_diff_test/Jenkinsfile from git https://github.com/larson-group/clubb.git
Running in Durability level: MAX_SURVIVABILITY
ha:////4I4gvr7nuLCyZc7iHPgjWyDjwima2Dfuve4pSq+aa/jjAAAAoh+LCAAAAAAAAP9tjTEOwjAQBM8BClpKHuFItIiK1krDC0x8GCfWnbEdkooX8TX+gCESFVvtrLSa5wtWKcKBo5UdUu8otU4GP9jS5Mixv3geZcdn2TIl9igbHBs2eJyx4YwwR1SwULBGaj0nRzbDRnX6rmuvydanHMu2V1A5c4MHCFXMWcf8hSnC9jqYxPTz/BXAFEIGsfuclm8zQVqFvQAAAA==[Pipeline] Start of Pipeline
ha:////4I0gKCMp6dFQ8heHxAil9D+Jw3tsu4qw18pQrtWYQdTRAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+KOrAycohUghExsUZZOEFIQkgb/d8mKe3EibgadyBQiQlLlmxL1nu+oE4RjhQdby12HpP2vA+jK4lPFLtroIm3dOGaMFGwXNpJkrGnpUrKFhaxClYC1hZ1oOTRZdiIVt1VExS65pxj2Q4CKm8GeAAThZxVzN8yR9jeRpMIf5y/AJj7DGxXvP/86jduZBmjwAAAAA==[Pipeline] node
Still waiting to schedule task
‘Mac’ is reserved for jobs with matching label expression
Running on ha:////4JZ5GY0msVCF6o770FRoablT8ToUy3BUZDMKJBMuZeT5AAAAnh+LCAAAAAAAAP9b85aBtbiIQTGjNKU4P08vOT+vOD8nVc83PyU1x6OyILUoJzMv2y+/JJUBAhiZGBgqihhk0NSjKDWzXb3RdlLBUSYGJk8GtpzUvPSSDB8G5tKinBIGIZ+sxLJE/ZzEvHT94JKizLx0a6BxUmjGOUNodHsLgAz2EgZh/eT83ILSktQifY3cxGIgrakPAHib2iPIAAAAJenkins in /home/jenkins/workspace/clubb_release_diff_test
ha:////4MnJELA9rrrUzSRSS3YU/yJTXkzSrZX/NRz3UHvEvOoaAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+KOrAycoh0gA0xsUZZOEFIQkgb/d8mKe3EibgadyBQiQlLlmxL1nu+oE4RjhQdby12HpP2vA+jK4lPFLtroIm3dOGaMFGwXNpJkrGnpUrKFhaxClYC1hZ1oOTRZdiIVt1VExS65pxj2Q4CKm8GeAAThZxVzN8yR9jeRpMIf5y/AJj7DGxXvP/86jfoP95RwAAAAA==[Pipeline] {
ha:////4Cyh64RUOEsYz6XxXO6ire1gz/mNiyIzMjUannQv7e4PAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+KOrAycoh0gQkxsUZZOEFIQkgb/d8mKe3EibgadyBQiQlLlmxL1nu+oE4RjhQdby12HpP2vA+jK4lPFLtroIm3dOGaMFGwXNpJkrGnpUrKFhaxClYC1hZ1oOTRZdiIVt1VExS65pxj2Q4CKm8GeAAThZxVzN8yR9jeRpMIf5y/AJj7DGxXvP/86jc09154wAAAAA==[Pipeline] stage
ha:////4FZe6M3PeXQuzqSn57XEEIuZHliV+Mnwn7Wvfk67SOoqAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+KOrAycoh0ggUxsUZZOEFIQkgb/d8mKe3EibgadyBQiQlLlmxL1nu+oE4RjhQdby12HpP2vA+jK4lPFLtroIm3dOGaMFGwXNpJkrGnpUrKFhaxClYC1hZ1oOTRZdiIVt1VExS65pxj2Q4CKm8GeAAThZxVzN8yR9jeRpMIf5y/AJj7DGxXvP/86jek7ggRwAAAAA==[Pipeline] { (Declarative: Checkout SCM)
ha:////4D92nCE/If1wVgh9o9cjl8Eef8hO6IrIw3R9jzZAitIcAAAAoh+LCAAAAAAAAP9tjTEOAiEURD9rLGwtPQTbaWGsbAmNJ0AWEZb8zwLrbuWJvJp3kLiJlZNMMm+a93rDOic4UbLcG+wdZu14DKOti0+U+lugiXu6ck2YKRguzSSpM+cFJRUDS1gDKwEbgzpQdmgLbIVXD9UGhba9lFS/o4DGdQM8gYlqLiqVL8wJdvexy4Q/z18BzLEA29ce4gfg7KmOvAAAAA==[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
 > git init /home/jenkins/workspace/clubb_release_diff_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
 > git --version # timeout=10
 > git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials THe key used by the system for the tests
 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision bca7031515a65f515103793fa7edfffd976d3165 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f bca7031515a65f515103793fa7edfffd976d3165 # timeout=10
Commit message: "Add principal components line to dashboard plots. This line shows the biases and parameter values that are found when only half the singular values are retained. The idea is to avoid choosing extreme parameter values in order to fit every wiggle in the metrics."
 > git rev-list --no-walk 98c1cc47f7c3c6fe0a19dfcee6e398ce29e9d355 # timeout=10
ha:////4Hdr08r0QBBNc13gSnpRVdUC2vsWpBYW0/du3E4aH4x/AAAAoh+LCAAAAAAAAP9tjTEOAiEURD9rLGwtPQTbGRNjZUtoPAGyiLDkfxZYdytP5NW8g8RNrJxkknnTvNcb1jnBiZLl3mDvMGvHYxhtXXyi1N8CTdzTlWvCTMFwaSZJnTkvKKkYWMIaWAnYGNSBskNbYCu8eqg2KLTtpaT6HQU0rhvgCUxUc1GpfGFOsLuPXSb8ef4KYI6xADvU7j9Dg2gqvAAAAA==[Pipeline] }
ha:////4D3JL6pX1M1/1q4Cb3emf6raOPn/7s/ZkFo29uGX8+4nAAAAoh+LCAAAAAAAAP9tjTEOAiEURD9rLGwtPQRbWRhjZUtoPAGyiLDkfxZYdytP5NW8g8RNrJxkknnTvNcb1jnBiZLl3mDvMGvHYxhtXXyi1N8CTdzTlWvCTMFwaSZJnTkvKKkYWMIaWAnYGNSBskNbYCu8eqg2KLTtpaT6HQU0rhvgCUxUc1GpfGFOsLuPXSb8ef4KYI6xADvU7j9J+wGOvAAAAA==[Pipeline] // stage
ha:////4DrvSwhiNTQbWuHkDmWP+Jxdw0IB9gojhcnQzDDjqob+AAAAph+LCAAAAAAAAP9tjTEOwjAQBM9BKWgpeYQDEh2iorXc8AITG+PEugv2haTiRXyNPxCIRMVWOyut5vmCMic4UPKycdgGzHWQXez91ORAqb1EGmRDZ1kTZopOajdosu44oyZ2MEcUsFCwdFhHygE9w0o15m6qaNBXJ07TtldQBHuDBwg1mdkk/sKYYH3tbSb8ef4KYOwYxI6h2G4+x/INtuQqUcEAAAA=[Pipeline] withEnv
ha:////4A1geliNffHoNvWUGjXsqtlHkCGDCSHe+zEFO3TNCAarAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+DOrAycoiUzoiJNerCCUITQtLo/zZJSSdOxNW4Ay2VmPBg2Zas93pDGQOcKBjuNHYWY2t570czJ54pdDdPmTu68pYwkte80bkhpc9rbShpWFUw2AjYamw9RYsmwU44+ZCVl2iqSwrzdhTArBrgCYWYyUmG9C1TgP19VJHwx/kLgKlPwOrDYvXyLD8BobDcwgAAAA==[Pipeline] {
ha:////4H6rZKvL75ThNwaUFkOY+Hxqp5o0QhwrcuoUaSessQdPAAAAph+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUZUVMrFEWThCaEJJG/7dJSjpxIq7GHWipxIQHy7ZkvdcbqhjgRMEwp7GzGFvLej+aObFMobt5yszRlbWEkbxmQmdBSp/XKihpWFWUsOGw1dh6ihZNgh138iFrL9HUlxTm7cihtGqAJxR8JicZ0rdMAfb3UUXCH+cvAKY+Qdk0ix2WZ/UBbwyqm8IAAAA=[Pipeline] stage
ha:////4PWkEu4yPR/Pkpstdaczn4TkOuBNQfKiHmXO1Ru1oTaMAAAAph+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUwIiYukZZOEFoQkgb/V9+UtqJE3E17kBLJSY8WLYl673eUESGE7ETjcXWY6y96ELvpiQG4vYaaBANXURNGClYoeygyNhqqYqShUVZDisJa4t1oOjRJdjIRj90GTS68px42o4Scm/u8IRMTuSkOX3LyLC99SYS/jh/ATB2CfLdfrbD/Cw+y7kUycIAAAA=[Pipeline] { (Checkout Clubb and Clubb_Release)
ha:////4A2gHxLf7EggO4hGeTH0KfVPg7UWrHMNtzlvguMO1K77AAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIiBB2iSmu54QUmNsaJdWdsh6TiRXyNPxCIRMUWq51t5vmCZYpw5GixNdQ5So3D4Hs7LRw4dhfPA7Z8xoYpsTcozSBZm3pGydnAnKKEhYCVocZzcmQzrEWr7qryimx1ynH6DgJKp2/wgEJM5qxi/sIYYXPtdWL6ef4KYAwZyu3uU/vwBgq0rvS+AAAA[Pipeline] sh
+ git clone https://LarsonGroupSysAdmin:repo99sitori@github.com/larson-group/clubb.git
Cloning into 'clubb'...
+ git clone https://LarsonGroupSysAdmin:repo99sitori@github.com/larson-group/clubb_release.git
Cloning into 'clubb_release'...
ha:////4G1AZT2w5HeS7GbCLy4iReWU6rtA4CiaRuUl/9v2sSXfAAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIihKgQVVrLDS8wsTFOrDtjOyQVL+Jr/IFAJCq2WO1sM88XLFOEI0eLraHOUWocBt/baeHAsbt4HrDlMzZMib1BaQbJ2tQzSs4G5hQlLASsDDWekyObYS1adVeVV2SrU47TdxBQOn2DBxRiMmcV8xfGCJtrrxPTz/NXAGMIGcrt/lO7N7BnLt++AAAA[Pipeline] }
ha:////4PRdG1qzreBSC23lC58d/XXRpm6N9mgLWUsg+AO51mf+AAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIiKGgQVVrLDS8wsTFOrDtjOyQVL+Jr/IFAJCq2WO1sM88XLFOEI0eLraHOUWocBt/baeHAsbt4HrDlMzZMib1BaQbJ2tQzSs4G5hQlLASsDDWekyObYS1adVeVV2SrU47TdxBQOn2DBxRiMmcV8xfGCJtrrxPTz/NXAGMIGcrt/lO7N4glvS6+AAAA[Pipeline] // stage
ha:////4JrxbwUXNF5gP6R9XMWFpdVXR7KglH5FrYrP/JN1KIsTAAAApx+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUnRgQE2uUhROEJoSk0f9tkpJOnIircQdaKjHhwbItWe/1hioGOFEwzGnsLMbWst6PZk4sU+hunjJzdGUtYSSvmdBZkNLntQpKGlYVJWw4bDW2nqJFk2DHnXzI2ks09SWFeTtyKK0a4AkFn8lJhvQtU4D9fVSR8Mf5C4CpT1A2zWKH5Vl9ANydZ8vCAAAA[Pipeline] stage
ha:////4FjX6LPfPcP4rLd0Q+YiXlHQFPIyIbvLbANsx5pVByrKAAAApx+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUTCAhpq5RFk4QmhDSRv+Xn5R24kRcjTvQUokJD5ZtyXqvNxSR4UTsRGOx9RhrL7rQuymJgbi9BhpEQxdRE0YKVig7KDK2WqqiZGFRlsNKwtpiHSh6dAk2stEPXQaNrjwnnrajhNybOzwhkxM5aU7fMjJsb72JhD/OXwCMXYJ8t5/tMD+LD0rlhNLCAAAA[Pipeline] { (Diff)
ha:////4ANZDodIw9bovMnkMIh6SVnsKvBPUn58KgWW+PC0vfF8AAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIiOhCiSmu54QUmNsaJdWdsh6TiRXyNPxCIRMUWq51t5vmCZYpw5GixNdQ5So3D4Hs7LRw4dhfPA7Z8xoYpsTcozSBZm3pGydnAnKKEhYCVocZzcmQzrEWr7qryimx1ynH6DgJKp2/wgEJM5qxi/sIYYXPtdWL6ef4KYAwZyu3uU/vwBr2eB0O+AAAA[Pipeline] sh
+ diff --exclude=.git --exclude=version_clubb_core.txt --exclude=version_silhs.txt -r clubb clubb_release
ha:////4M57stTfGvHOvpAMko1RASAuGfG/slrkVkHrYmYSCBPoAAAApR+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOICVEgoFa3lhheYxBgn1l2wHZyKF/E1/oBFJCq2WO1sM683LIOHmr3BTlNvKTQWBzeavDCx76+OE3Z8wYYpsNModZLc6tOMkqOGOUUJCwErTY3jYMlEWItOPVTlFJnqHH3+jgJK297hCYXI5qh8/MLkYXMb28D08/wVwDQMEcr9Ntfu8AEWNdkpvgAAAA==[Pipeline] }
ha:////4C20CHA+fMXf7VohTrNh2U2dwFhWROSghkx/Q58QN93SAAAApR+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOKi0FAgqrRWGl5gYmOcWHfGdkgqXsTX+AMWkajYYrWzzbzesI4BThwM9poGS7Gz6N1o8sKJw3B1PGHPF+yYIjuNrZ5aVrpZsOWkYUlRwkrARlPnOFoyCbailw9ZOUmmOqeQv6OA0qo7PKEQ2ZxkSF+YA+xuo4pMP89fAczeJyj3da768AEi+zpyvgAAAA==[Pipeline] // stage
ha:////4JLmhT8nmhc0kyFGGC2Mua7+BNj3UxM531d+NZRuT2ndAAAAph+LCAAAAAAAAP9tjTEOwjAUQ3+DOrAycohU7YqYWKMunCCkISSN/m+TlHbiRFyNOxCoxIQHy7ZkvecLyhjgSMFwp7G3GJXlg59MTnym0F89zdzRhSvCSF7zVs8tdfq01paShlUFg42ArUblKVo0CXbCybusvERTnVPI20EAs90IDyhEJicZ0rcsAfa3qYuEP85fACxDAlbX2Zrm8yzf8hZCqsIAAAA=[Pipeline] stage
ha:////4J8VKcc+UDLIYt/pceZoEZjdg5AzM5qpPgOIVWUQDhS9AAAAph+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUKiNiYo2ycILQhJA0+r9NUtKJE3E17kBLJSY8WLYl673eUMUAJwqGOY2dxdha1vvRzIllCt3NU2aOrqwljOQ1EzoLUvq8VkFJw6qihA2HrcbWU7RoEuy4kw9Ze4mmvqQwb0cOpVUDPKHgMznJkL5lCrC/jyoS/jh/ATD1CcqmWeywPKsPpnFij8IAAAA=[Pipeline] { (Declarative: Post Actions)
ha:////4KxdVDcrEUoWHuV/hV+WQBqE9/9a38XoMdWUtSMdwLE6AAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIiAR2iSmu54QUmNsaJdWdsh6TiRXyNPxCIRMUWq51t5vmCZYpw5GixNdQ5So3D4Hs7LRw4dhfPA7Z8xoYpsTcozSBZm3pGydnAnKKEhYCVocZzcmQzrEWr7qryimx1ynH6DgJKp2/wgEJM5qxi/sIYYXPtdWL6ef4KYAwZyu3uU/vwBrANZ3i+AAAA[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
ha:////4Fw9iALW4nuMLbMbeOmZZnRQ8bQFJW9LVzZ2N+vqennLAAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIigagQVVrLDS8wsTFOrDtjOyQVL+Jr/IFAJCq2WO1sM88XLFOEI0eLraHOUWocBt/baeHAsbt4HrDlMzZMib1BaQbJ2tQzSs4G5hQlLASsDDWekyObYS1adVeVV2SrU47TdxBQOn2DBxRiMmcV8xfGCJtrrxPTz/NXAGMIGcrt/lO7N+4u68W+AAAA[Pipeline] }
ha:////4BbhIGRyLtHPhzGpY3QdJYPznnSD1jLF75gTjqTaVYqbAAAApB+LCAAAAAAAAP9tjTESwiAURH/iWNhaeggyk8LGsbJlaDwBJogQ5n8CRFJ5Iq/mHUQzY+UWO/u2ec8XrGOAIwXNrMLBYOwM827SZbFMYbg6yszShXWEkZxiQmVBvTotKCgpWFLVsOKwUdg5igZ1gi238i4bJ1E35xTKd+BQm36EB1S8mJMM6QtzgN1t6iPhz/NXALP3Cep2/6n2DdZseDS+AAAA[Pipeline] // stage
ha:////4CW46vb30mxg+7GPodvIrFZIMJpQcaANhmgeC+85loeSAAAApR+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOKi0FAgqrRWGl5gYmOcWHfGdkgqXsTX+AMWkajYYrWzzbzesI4BThwM9poGS7Gz6N1o8sKJw3B1PGHPF+yYIjuNrZ5aVrpZsOWkYUlRwkrARlPnOFoyCbailw9ZOUmmOqeQv6OA0qo7PKEQ2ZxkSF+YA+xuo4pMP89fAczeJyj3h1x1/QEKvQBNvgAAAA==[Pipeline] }
ha:////4IvghMLn8A+FvST/cqh5Z1FTXOKSn30v7MrXp1itzXYVAAAApR+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOICVEgoFa3lhheYxBgn1l2wHZyKF/E1/oBFJCq2WO1sM683LIOHmr3BTlNvKTQWBzeavDCx76+OE3Z8wYYpsNModZLc6tOMkqOGOUUJCwErTY3jYMlEWItOPVTlFJnqHH3+jgJK297hCYXI5qh8/MLkYXMb28D08/wVwDQMEcr9Iddu+wFJP1HLvgAAAA==[Pipeline] // withEnv
ha:////4CJ4kL1oiOD2RBE8X9kVA01m558AfuuqXmuXTmXu0q9qAAAApB+LCAAAAAAAAP9tjTEOwjAQBDdBFLSUPMKREA1CVLRWGl5gEmOcWHfBvpBUvIiv8QciIlGx1c4083pjmSKOHJ1qLLWeUuVVF3o3PTVwbK+BB9XwRVVMiYNVpR1Kru1pxpLFYl6WY6GxslQFTp6cYK0b8zBFMOSKs8TJHTRyX9/xRKanspgoXxgjNre+Tky/zt8Axq4T5Nu9INt9AFo7wVm9AAAA[Pipeline] }
ha:////4FIquK3JZr8em7PuiS/2Uwrs3IWDbBX3jcavJMCS5X/rAAAAoh+LCAAAAAAAAP9tjbEOgjAURS8YB1dHP6KYMBon14bFL6hQa6F5D9uHMPlF/pr/IJHEyTvdc5bzemOdIo4cnWotdZ5S7VUfBjc/NXLsroFH1fJF1UyJg1WVHStu7GnBisViWZZjpbGxVAdOnpxgq1vzMEUw5IqzxNkdNHLf3PFEpueymChfmCJ2t6FJTL/O3wCmvhfk5V6QlR8tH+kBvQAAAA==[Pipeline] // node
ha:////4DYXN6wFUg/jXRobPObMEoUWJrJXv9xuQO4csBdByOrNAAAAoh+LCAAAAAAAAP9tjTEOwjAQBDdBFLSUPMIRUCIqWisNLzCJMU6su2BfSCpexNf4AxGRqNhqZ5p5vbFMEUeOTjWWWk+p8qoLvZueGji218CDaviiKqbEwarSDiXX9jRjyWIxL8ux0FhZqgInT06w1o15mCIYcsVZ4uQOGrmv73gi01NZTJQvjBGbW18npl/nbwBj1wny/VaQ7T4LBo5LvQAAAA==[Pipeline] End of Pipeline
Finished: SUCCESS