Started by an SCM change
Obtained jenkins_tests/clubb_release_diff_test/Jenkinsfile from git https://github.com/larson-group/clubb.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/clubb_release_diff_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
> git init /home/jenkins/workspace/clubb_release_diff_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
> git --version # timeout=10
> git --version # 'git version 2.30.2'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
> git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision 346643e9a3d430e30182bc4b244f6251fdf50b9e (refs/remotes/origin/master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 346643e9a3d430e30182bc4b244f6251fdf50b9e # timeout=10
Commit message: "BIT_CHANGING! brunt_vaisala_freq_sqd_mixed now replaces brunt_vaisala_freq_sqd for later calculations - CLUBB ticket #1102"
> git rev-list --no-walk bb786ccdfdd654621de358074de535e815b1353d # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Clubb and Clubb_Release)
[Pipeline] sh
+ git clone https://github.com/larson-group/clubb.git
Cloning into 'clubb'...
+ git clone https://github.com/larson-group/clubb_release.git
Cloning into 'clubb_release'...
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Diff)
[Pipeline] sh
+ diff --exclude=.git --exclude=version_clubb_core.txt --exclude=version_silhs.txt -r clubb clubb_release
diff '--exclude=.git' '--exclude=version_clubb_core.txt' '--exclude=version_silhs.txt' -r clubb/src/CLUBB_core/advance_clubb_core_module.F90 clubb_release/src/CLUBB_core/advance_clubb_core_module.F90
986c986
< !$acc brunt_vaisala_freq_sqd_splat, &
---
> !$acc brunt_vaisala_freq_sqd_plus, brunt_vaisala_freq_sqd_splat, &
1552d1551
< invrs_tau_wp3_zm(i,k) = invrs_tau_zm(i,k)
2903c2902
< !$acc brunt_vaisala_freq_sqd_splat, &
---
> !$acc brunt_vaisala_freq_sqd_plus, brunt_vaisala_freq_sqd_splat, &
diff '--exclude=.git' '--exclude=version_clubb_core.txt' '--exclude=version_silhs.txt' -r clubb/src/CLUBB_core/advance_helper_module.F90 clubb_release/src/CLUBB_core/advance_helper_module.F90
335c335
< !$acc lambda0_stability, Lscale_zm )
---
> !$acc brunt_vaisala_freq_sqd_plus, lambda0_stability, Lscale_zm )
900,901c900,901
< !$acc Richardson_num, Cx_fnc_interp, Ri_zm, &
< !$acc ddzt_um, ddzt_vm, shear_sqd, turb_freq_sqd, Lscale_zm, &
---
> !$acc brunt_vaisala_freq_sqd_plus, Richardson_num, Cx_fnc_interp, &
> !$acc Ri_zm, ddzt_um, ddzt_vm, shear_sqd, turb_freq_sqd, Lscale_zm, &
diff '--exclude=.git' '--exclude=version_clubb_core.txt' '--exclude=version_silhs.txt' -r clubb/src/CLUBB_core/mixing_length.F90 clubb_release/src/CLUBB_core/mixing_length.F90
1586c1586
< brunt_vaisala_freq_sqd_smth = zm2zt2zm( nz,ngrdcol,gr, brunt_vaisala_freq_sqd_mixed )
---
> brunt_vaisala_freq_sqd_smth = zm2zt2zm( nz,ngrdcol,gr, brunt_vaisala_freq_sqd )
1595c1595
< tmp_calc(i,k) = 1.e8_core_rknd * abs(brunt_vaisala_freq_sqd_mixed(i,k))**3
---
> tmp_calc(i,k) = 1.e8_core_rknd * abs(brunt_vaisala_freq_sqd(i,k))**3
1601c1601
< brunt_vaisala_freq_sqd_mixed, &
---
> brunt_vaisala_freq_sqd, &
1612,1613c1612,1613
< brunt_vaisala_freq_clipped(i,k) = min( brunt_vaisala_freq_sqd_mixed(i,k), &
< 1.e8_core_rknd * abs(brunt_vaisala_freq_sqd_mixed(i,k))**3)
---
> brunt_vaisala_freq_clipped(i,k) = min( brunt_vaisala_freq_sqd(i,k), &
> 1.e8_core_rknd * abs(brunt_vaisala_freq_sqd(i,k))**3)
1844c1844
< invrs_tau_xp2_zm(i,k) = invrs_tau_bkgnd(i,k) + invrs_tau_sfc(i,k) &
---
> invrs_tau_xp2_zm(i,k) = 0.1_core_rknd * invrs_tau_bkgnd(i,k) + invrs_tau_sfc(i,k) &
1852,1861c1852,1861
< ! !$acc parallel loop gang vector collapse(2) default(present)
< ! do k = 1, nz
< ! do i = 1, ngrdcol
< ! if ( ice_supersat_frac_zm(i,k) <= 0.01_core_rknd &
< ! .and. invrs_tau_xp2_zm(i,k) >= 0.003_core_rknd ) then
< ! invrs_tau_xp2_zm(i,k) = 0.003_core_rknd
< ! end if
< ! end do
< ! end do
< ! !$acc end parallel loop
---
> !$acc parallel loop gang vector collapse(2) default(present)
> do k = 1, nz
> do i = 1, ngrdcol
> if ( ice_supersat_frac_zm(i,k) <= 0.01_core_rknd &
> .and. invrs_tau_xp2_zm(i,k) >= 0.003_core_rknd ) then
> invrs_tau_xp2_zm(i,k) = 0.003_core_rknd
> end if
> end do
> end do
> !$acc end parallel loop
diff '--exclude=.git' '--exclude=version_clubb_core.txt' '--exclude=version_silhs.txt' -r clubb/src/error.F90 clubb_release/src/error.F90
111c111
< character(len=20), dimension(:), allocatable, private :: &
---
> character(len=10), dimension(:), allocatable, private :: &
290c290
< character(len=20), dimension(max_variables) :: &
---
> character(len=10), dimension(max_variables) :: &
376c376
< t_variables(1:max_variables) = " "
---
> t_variables(1:max_variables) = " "
423c423
< if (t_variables(i) == " ") exit
---
> if (t_variables(i) == " ") exit
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] emailext
Sending email to: messnermet@uwm.edu
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE