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new hole-filling method which takes TKE from up2 and vp2 (#1217)

Added new hole-filling method which takes TKE from up2 and vp2
CLUBB ticket #1165

BIT_CHANGING if flag `l_wp2_fill_holes_tke` is set to true
Introduced new flag `l_wp2_fill_holes_tke` to turn on new wp2 hole-filling subroutine
that takes TKE from up2 and vp2.
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* Modifying diffness test to handle fields with &lt; 0 averages and accept an argument as the threshold.

* Overwriting correct variable.
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Fixed clipping in binormal correlation calc
CLUBB ticket #1164

BIT_CHANGING

* Implemented new denominator with smooth_max clipping
* Created subroutine `smooth_corr_quotient` in pdf_utilities.F90, outsourcing smooth correlation division
* This subroutine is used `calc_comp_corrs_binormal` and `transform_pdf_chi_eta_component`
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