http://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_nvhpc_gpu_multi_col_avg_test/This tests CLUBB's multi column output capabilities. We test outputting every timestep, every 4 timesteps, and every 4 timesteps in single precision, then compare the _multi_col.nc files to make sure they're all similar.clubb_nvhpc_gpu_multi_col_avg_testclubb_nvhpc_gpu_multi_col_avg_testclubb_nvhpc_gpu_multi_col_avg_testclubb_nvhpc_gpu_multi_col_avg_testhttp://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/falseStarted by an SCM change1740c5d0b7724ed353d1cca476ade7b6f8569e263c40c5d0b7724ed353d1cca476ade7b6f8569e263crefs/remotes/origin/master40c5d0b7724ed353d1cca476ade7b6f8569e263c40c5d0b7724ed353d1cca476ade7b6f8569e263crefs/remotes/origin/master40c5d0b7724ed353d1cca476ade7b6f8569e263c40c5d0b7724ed353d1cca476ade7b6f8569e263crefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1732045162973990clubb_nvhpc_gpu_multi_col_avg_test #1717false17830SUCCESS1770889629131http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/17/src/CLUBB_core/CMakeLists.txt92dfde364177231829c86e739a48ac23bef836961770849785000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduRemoved blank line to test python update scripts 2026-02-11 16:43:05 -060092dfde364177231829c86e739a48ac23bef83696Removed blank line to test python update scriptseditsrc/CLUBB_core/CMakeLists.txtREADME.MICRO_M20055a252b6bad0b47ba5418cb6475a2ee5ab104328d1770858267000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduFixed double space to test updateClubbMorrison.py python script 2026-02-11 19:04:27 -06005a252b6bad0b47ba5418cb6475a2ee5ab104328dFixed double space to test updateClubbMorrison.py python scripteditREADME.MICRO_M2005githttp://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockfalse16http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/16/Started by an SCM change16ff3d91fcabb2248cc86aabf4b585f489281db237ff3d91fcabb2248cc86aabf4b585f489281db237refs/remotes/origin/masterff3d91fcabb2248cc86aabf4b585f489281db237ff3d91fcabb2248cc86aabf4b585f489281db237refs/remotes/origin/masterff3d91fcabb2248cc86aabf4b585f489281db237ff3d91fcabb2248cc86aabf4b585f489281db237refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1637557492973990clubb_nvhpc_gpu_multi_col_avg_test #1616false16736SUCCESS1770716830489http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/16/src/CLUBB_core/CMakeLists.txtff3d91fcabb2248cc86aabf4b585f489281db2371770687739000http://carson.math.uwm.edu/jenkins/user/pickettCole Pickettlarsongroupgithub@gmail.comAdded empty line to test update scripts 2026-02-09 19:42:19 -0600ff3d91fcabb2248cc86aabf4b585f489281db237Added empty line to test update scriptseditsrc/CLUBB_core/CMakeLists.txtgithttp://carson.math.uwm.edu/jenkins/user/pickettCole Pickettfalse17http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/17/15http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/15/Started by an SCM change15678d409e86486e7b6b7f241893c3d325e2310a55678d409e86486e7b6b7f241893c3d325e2310a55refs/remotes/origin/master678d409e86486e7b6b7f241893c3d325e2310a55678d409e86486e7b6b7f241893c3d325e2310a55refs/remotes/origin/master678d409e86486e7b6b7f241893c3d325e2310a55678d409e86486e7b6b7f241893c3d325e2310a55refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1519617042973990clubb_nvhpc_gpu_multi_col_avg_test #1515false15639SUCCESS1770371227565http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/15/src/CLUBB_core/stats_zt_module.F90input/stats/scalars_stats.insrc/CLUBB_core/stats_clubb_utilities.F90src/CLUBB_core/stats_zm_module.F90input/stats/all_stats.in678d409e86486e7b6b7f241893c3d325e2310a551770322192000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMoving wp2sclrp, wpsclrp2, wpsclrprtp, and wpsclrpthlp to the zt netcdf output file, since those are zt variables. Also adding a missing variable, rcm_in_cloud, to all_stats.in and correcting a missing comma bug. This is technically BIT_CHANGING because the variables are moving files, but the stored data is identical from 1:nzt - the nzm level just had garbage for those variables and is now gone. (#1271) 2026-02-05 14:09:52 -0600678d409e86486e7b6b7f241893c3d325e2310a55Moving wp2sclrp, wpsclrp2, wpsclrprtp, and wpsclrpthlp to the zt netcdf output file, since those are zt variables. Also adding a missing variable, rcm_in_cloud, to all_stats.in and correcting a missing comma bug. This is technically BIT_CHANGING because the variables are moving files, but the stored data is identical from 1:nzt - the nzm level just had garbage for those variables and is now gone. (#1271)editsrc/CLUBB_core/stats_zt_module.F90editinput/stats/scalars_stats.ineditsrc/CLUBB_core/stats_zm_module.F90editinput/stats/all_stats.ineditsrc/CLUBB_core/stats_clubb_utilities.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse16http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/16/14http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/14/Started by an SCM change14f1b6cfe91fd5c120333991b2386dd7e7845ae2e3f1b6cfe91fd5c120333991b2386dd7e7845ae2e3refs/remotes/origin/masterf1b6cfe91fd5c120333991b2386dd7e7845ae2e3f1b6cfe91fd5c120333991b2386dd7e7845ae2e3refs/remotes/origin/masterf1b6cfe91fd5c120333991b2386dd7e7845ae2e3f1b6cfe91fd5c120333991b2386dd7e7845ae2e3refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1414076182973990clubb_nvhpc_gpu_multi_col_avg_test #1414false14543SUCCESS1768038426470http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/14/src/CLUBB_core/pdf_closure_module.F90src/CLUBB_core/clubb_api_module.F90src/clubb_driver.F90ba709f78476c6e1868009855327c1d42cbb904101767981713000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduMore small bug fixes 2026-01-09 12:01:53 -0600ba709f78476c6e1868009855327c1d42cbb90410More small bug fixeseditsrc/CLUBB_core/pdf_closure_module.F90editsrc/clubb_driver.F90editsrc/CLUBB_core/clubb_api_module.F90src/clubb_driver.F90ba5dd963b14b0238fc5e8b358390af68a66aa3a01767985840000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduAnother small gpu bug fix 2026-01-09 13:10:40 -0600ba5dd963b14b0238fc5e8b358390af68a66aa3a0Another small gpu bug fixeditsrc/clubb_driver.F90src/CLUBB_core/clubb_api_module.F90f1b6cfe91fd5c120333991b2386dd7e7845ae2e31767993114000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving extra acc end statement 2026-01-09 15:11:54 -0600f1b6cfe91fd5c120333991b2386dd7e7845ae2e3Removing extra acc end statementeditsrc/CLUBB_core/clubb_api_module.F90githttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse15http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/15/13http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/13/Started by user Gunther HueblerhueblerGunther Huebler13d93dd4e58f75626f8b70b6e631d463aed4ed53fad93dd4e58f75626f8b70b6e631d463aed4ed53farefs/remotes/origin/masterd93dd4e58f75626f8b70b6e631d463aed4ed53fad93dd4e58f75626f8b70b6e631d463aed4ed53farefs/remotes/origin/masterd93dd4e58f75626f8b70b6e631d463aed4ed53fad93dd4e58f75626f8b70b6e631d463aed4ed53farefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1317044952973990clubb_nvhpc_gpu_multi_col_avg_test #1313false13419SUCCESS1767954040605http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/13/src/clubb_driver.F901c7c6ce6eaba598c7e10dc276e152a825a0642ac1767953771000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduAdding deallocation for fcor_y 2026-01-09 04:16:11 -06001c7c6ce6eaba598c7e10dc276e152a825a0642acAdding deallocation for fcor_yeditsrc/clubb_driver.F90src/clubb_driver.F90d93dd4e58f75626f8b70b6e631d463aed4ed53fa1767954031000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduMore small bug fixes 2026-01-09 04:20:31 -0600d93dd4e58f75626f8b70b6e631d463aed4ed53faMore small bug fixeseditsrc/clubb_driver.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse14http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/14/12http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/12/Started by an SCM change128033a1492b3b2ce6c8d314942d2fba00669188c38033a1492b3b2ce6c8d314942d2fba00669188c3refs/remotes/origin/master8033a1492b3b2ce6c8d314942d2fba00669188c38033a1492b3b2ce6c8d314942d2fba00669188c3refs/remotes/origin/master8033a1492b3b2ce6c8d314942d2fba00669188c38033a1492b3b2ce6c8d314942d2fba00669188c3refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1212581992973990clubb_nvhpc_gpu_multi_col_avg_test #1212false12395FAILURE1767952027463http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/12/input/case_setups/atex_long_edsclr_sounding.ininput/stats/standard_stats.insrc/CLUBB_core/advance_wp2_wp3_module.F90input/case_setups/coriolis_test_edsclr_sounding.insrc/CLUBB_core/pdf_closure_module.F90input/case_setups/atex_long_sfc.ininput/tunable_parameters_coriolis_cases/ekman_parameters.ininput/tunable_parameters_coriolis_cases/atex_long_parameters.insrc/clubb_tuner.F90input/case_setups/coriolis_test_sfc.insrc/CLUBB_core/output_netcdf.F90src/CLUBB_core/model_flags.F90input/case_setups/cgils_s6_model.ininput/case_setups/coriolis_test_sounding.insrc/G_unit_test_types/pdf_parameter_tests.F90input/case_setups/ekman_sfc.ininput/stats/scalars_stats.insrc/generalized_grid_test.F90input/case_setups/coriolis_test_sclr_sounding.ininput/case_setups/ekman_edsclr_sounding.ininput/stats/all_stats.insrc/Benchmark_cases/ekman.F90src/CLUBB_core/advance_xp2_xpyp_module.F90src/CLUBB_core/advance_xm_wpxp_module.F90input/case_setups/ekman_sclr_sounding.ininput/tunable_parameters_coriolis_cases/coriolis_test_parameters.insrc/CLUBB_core/clubb_api_module.F90input/case_setups/coriolis_test_model.ininput/stats/nobudgets_nomicro_stats.insrc/Benchmark_cases/prescribe_forcings.F90input/tunable_parameters/configurable_model_flags.insrc/Benchmark_cases/atex_long.F90src/CLUBB_core/stats_variables.F90src/CLUBB_core/grid_adaptation_module.F90run_scripts/run_bindiff_w_flags_config_core_flags.jsoninput/case_setups/ekman_model.insrc/Benchmark_cases/CMakeLists.txtpostprocessing/pyplotgen/config/Case_definitions.pyinput/stats/host_budgets_stats.insrc/CLUBB_core/stats_clubb_utilities.F90input/case_setups/atex_long_model.ininput/stats/nobudgets_stats.insrc/G_unit_test_types/spurious_source_test.F90src/input_fields.F90input/case_setups/atex_long_sounding.insrc/CLUBB_core/numerical_check.F90compile/file_list/clubb_model_filessrc/CLUBB_core/stats_zm_module.F90src/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/constants_clubb.F90src/clubb_driver.F90src/CLUBB_core/stats_zt_module.F90input/case_setups/ekman_sounding.ininput/stats/nightly_stats.ininput/case_setups/atex_long_sclr_sounding.in4902a5ccf6c0da1bf588ea853aaadbc9a776dfa21767903824000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comNon trad coriolis (#1267) * Updating the clubb core and silhs version files * Fixing bug. qclvar copying is handled by the api, but we were deleting it with an unstructured data statement. I added this due as a fix before thinking qclvar was a local variable, which happened because I mixed up the CLUBB_CAM and CLUBBND_CAM flags. https://github.com/larson-group/cam/issues/175 * Fixing GPU bug. There is a vertical dependency with wpxp. This is what was breaking the ECT test, see larson-group/cam#175 * Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test. * Moving PosInf to clubb_model_settings.F90 * Updating the clubb core and silhs version files * Add flags for the Coriolis terms. * Pass fcory from api module into advance module * Implement the traditional Coriolis terms * Implement the nontraditional Coriolis terms * Add stats variables for the Coriolis terms * Compute Coriolis parameters from namelist latitude * Create the coriolis_test case * Tune the coriolis_test case. However, oscillation frequency is too slow * Correct a coefficient in Coriolis. "coriolis_test" matches analytical * Update advance_clubb_core_module.F90 Rename fcory as fcor_y and add description * Update advance_wp2_wp3_module.F90 Rename fcory as fcor_y and add description * Update advance_xm_wpxp_module.F90 Rename fcory as fcor_y and add description * Update advance_xp2_xpyp_module.F90 Rename fcory as fcor_y and add description * Update clubb_api_module.F90 Rename fcory as fcor_y and add description * Update spurious_source_test.F90 Rename fcory as fcor_y and add description * Update clubb_driver.F90 Rename fcor as fcor_y and add description. Also, add description for the coriolis_test * Update generalized_grid_test.F90 Rename fcory as fcor_y and add description. * Update coriolis_test_model.in Add description for the Coriolis test case * Stablize the cgils_s6 case with smaller time step * Create the ekman case * Tune the ekman case to match LES * Compute wp2up with PDF and pass along with wp2thvp * Implement the nontraditional Coriolis term for wp3 * Fine-tune parameters for the ekman case * Create the atex_long case * Retune ekman case with l_vary_convect_depth = .true. * Fine-tune the atex_long case * Add atex_long case to pyplotgen * Fine-tune atex_long case with less radical changes * Updating the clubb core and silhs version files * Small bug fix in the wp2up flip and adding new files to the cmakelist * Renmaing, moving some files, and reverting change to cgils_s6 timestep * Adding new flags to flag test file * Updating comment for fcor_y calculation explanation * Removing accidentally added file --------- Co-authored-by: pickett <larsongroupgithub@gmail.com> Co-authored-by: Hing Ong <hing.ong@anl.gov> Co-authored-by: Hing Ong <36782452+HingOng@users.noreply.github.com> 2026-01-08 14:23:44 -06004902a5ccf6c0da1bf588ea853aaadbc9a776dfa2Non trad coriolis (#1267)editsrc/CLUBB_core/model_flags.F90editsrc/CLUBB_core/pdf_closure_module.F90addinput/case_setups/ekman_model.ineditsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/generalized_grid_test.F90editinput/case_setups/cgils_s6_model.inaddinput/case_setups/atex_long_model.ineditinput/stats/standard_stats.ineditsrc/Benchmark_cases/CMakeLists.txteditsrc/clubb_driver.F90addinput/case_setups/atex_long_edsclr_sounding.inaddinput/case_setups/atex_long_sfc.ineditsrc/G_unit_test_types/pdf_parameter_tests.F90addinput/case_setups/ekman_sounding.inaddinput/case_setups/coriolis_test_sfc.ineditsrc/CLUBB_core/advance_xm_wpxp_module.F90addinput/case_setups/ekman_edsclr_sounding.ineditsrc/CLUBB_core/numerical_check.F90editsrc/CLUBB_core/advance_wp2_wp3_module.F90addinput/case_setups/ekman_sclr_sounding.inaddinput/case_setups/atex_long_sclr_sounding.ineditinput/stats/scalars_stats.inaddsrc/Benchmark_cases/ekman.F90addinput/tunable_parameters_coriolis_cases/coriolis_test_parameters.inaddinput/case_setups/coriolis_test_sounding.inaddsrc/Benchmark_cases/atex_long.F90editsrc/CLUBB_core/stats_variables.F90addinput/case_setups/atex_long_sounding.ineditsrc/Benchmark_cases/prescribe_forcings.F90editinput/stats/nightly_stats.inaddinput/case_setups/ekman_sfc.ineditpostprocessing/pyplotgen/config/Case_definitions.pyeditsrc/G_unit_test_types/spurious_source_test.F90editinput/stats/host_budgets_stats.ineditinput/stats/nobudgets_nomicro_stats.ineditsrc/CLUBB_core/advance_xp2_xpyp_module.F90addinput/case_setups/coriolis_test_edsclr_sounding.inaddinput/tunable_parameters_coriolis_cases/ekman_parameters.inaddinput/tunable_parameters_coriolis_cases/atex_long_parameters.ineditinput/stats/all_stats.ineditsrc/CLUBB_core/grid_adaptation_module.F90editcompile/file_list/clubb_model_fileseditrun_scripts/run_bindiff_w_flags_config_core_flags.jsoneditsrc/CLUBB_core/clubb_api_module.F90editsrc/CLUBB_core/stats_zm_module.F90addinput/case_setups/coriolis_test_sclr_sounding.ineditsrc/input_fields.F90editsrc/CLUBB_core/stats_clubb_utilities.F90editsrc/CLUBB_core/output_netcdf.F90editsrc/CLUBB_core/constants_clubb.F90editsrc/CLUBB_core/stats_zt_module.F90addinput/case_setups/coriolis_test_model.ineditsrc/clubb_tuner.F90editinput/stats/nobudgets_stats.ineditinput/tunable_parameters/configurable_model_flags.ininput/case_setups/cgils_s6_model.insrc/CLUBB_core/advance_wp2_wp3_module.F90src/CLUBB_core/advance_xp2_xpyp_module.F908033a1492b3b2ce6c8d314942d2fba00669188c31767951630000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduGPU fixed and cgils_s6 fix 2026-01-09 03:40:30 -06008033a1492b3b2ce6c8d314942d2fba00669188c3GPU fixed and cgils_s6 fixeditinput/case_setups/cgils_s6_model.ineditsrc/CLUBB_core/advance_wp2_wp3_module.F90editsrc/CLUBB_core/advance_xp2_xpyp_module.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse13http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/13/11http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/11/Started by an SCM change11418c202a9b0512fc8c4f421918cc978164db852d418c202a9b0512fc8c4f421918cc978164db852drefs/remotes/origin/master418c202a9b0512fc8c4f421918cc978164db852d418c202a9b0512fc8c4f421918cc978164db852drefs/remotes/origin/master418c202a9b0512fc8c4f421918cc978164db852d418c202a9b0512fc8c4f421918cc978164db852drefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#115129652973990clubb_nvhpc_gpu_multi_col_avg_test #1111false11275SUCCESS1766051227901http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/11/src/CLUBB_core/fill_holes.F90src/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/grid_class.F90run_scripts/run_bindiff_w_flags_config_core_flags.jsoninput/case_setups/arm_97_model.ininput/case_setups/arm_97_edsclr_sounding.in418c202a9b0512fc8c4f421918cc978164db852d1766005108000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comFixes for fill_holes and edsclr code (#1266) * Fixing bugs in new hole fillers that caused error when ran in descending mode, the issue was that dz is negative in descending mode, so we need abs() around it when calculating the normalized mass. Also fixing a related bug in the way edsclr code calls the hole filler - it was not using the generalized bounds. Also removing the ifdef in favor of normal ifs * Copying the rtm and thm values from arm_97_sounding.in to the edsclr_sounding file. This still allows arm_97 to catch the bugs we want it to. 2025-12-17 14:58:28 -0600418c202a9b0512fc8c4f421918cc978164db852dFixes for fill_holes and edsclr code (#1266)editinput/case_setups/arm_97_model.ineditinput/case_setups/arm_97_edsclr_sounding.ineditsrc/CLUBB_core/fill_holes.F90editrun_scripts/run_bindiff_w_flags_config_core_flags.jsoneditsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/CLUBB_core/grid_class.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse12http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/12/10http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/10/Started by an SCM change100959bb14d6f748501bee53902e484166d501923c0959bb14d6f748501bee53902e484166d501923crefs/remotes/origin/master0959bb14d6f748501bee53902e484166d501923c0959bb14d6f748501bee53902e484166d501923crefs/remotes/origin/master0959bb14d6f748501bee53902e484166d501923c0959bb14d6f748501bee53902e484166d501923crefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#102917312973990clubb_nvhpc_gpu_multi_col_avg_test #1010false10176SUCCESS1765446430438http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/10/run_scripts/run_clubb_w_varying_flags.pyjenkins_tests/clubb_rev_grid_matrix_solve_test/Jenkinsfilesrc/CLUBB_core/advance_wp2_wp3_module.F90src/generalized_grid_test.F90run_scripts/run_bindiff_w_flags_config_core_flags.jsonjenkins_tests/clubb_generalized_vertical_grid_test/Jenkinsfilesrc/CLUBB_core/advance_xp2_xpyp_module.F90src/CLUBB_core/advance_xm_wpxp_module.F90src/CLUBB_core/advance_windm_edsclrm_module.F90jenkins_tests/clubb_generalized_vert_grid_host_flags/Jenkinsfilesrc/clubb_driver.F90src/CLUBB_core/model_flags.F90src/CLUBB_core/mono_flux_limiter.F90run_scripts/run_scm_all.py0959bb14d6f748501bee53902e484166d501923c1765406071000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comGrid reverse matrix test (#1265) * Making new flag l_force_descending_solves that forces us to use descending solves. Having it true keeps results BFB between ascending and descending when using -O0. * renaming test * Moving flag * test fix * test fix * test fix * Removing iteration limit on script and adding test error * Removing test error, it was correctly caught * Adding max statement to aid in single precision runs and removing accidentally commited file. 2025-12-10 16:34:31 -06000959bb14d6f748501bee53902e484166d501923cGrid reverse matrix test (#1265)editsrc/CLUBB_core/advance_xp2_xpyp_module.F90editrun_scripts/run_clubb_w_varying_flags.pyeditsrc/CLUBB_core/advance_wp2_wp3_module.F90editjenkins_tests/clubb_generalized_vertical_grid_test/Jenkinsfileeditjenkins_tests/clubb_generalized_vert_grid_host_flags/Jenkinsfileeditrun_scripts/run_bindiff_w_flags_config_core_flags.jsoneditsrc/clubb_driver.F90editsrc/CLUBB_core/model_flags.F90editsrc/CLUBB_core/advance_windm_edsclrm_module.F90editsrc/CLUBB_core/advance_xm_wpxp_module.F90editsrc/CLUBB_core/mono_flux_limiter.F90editsrc/generalized_grid_test.F90addjenkins_tests/clubb_rev_grid_matrix_solve_test/Jenkinsfileeditrun_scripts/run_scm_all.pygithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse11http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/11/9http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/9/Started by an SCM change9988ea0f2cc24e424e0a204b65bfd59bd4e9eee5b988ea0f2cc24e424e0a204b65bfd59bd4e9eee5brefs/remotes/origin/master988ea0f2cc24e424e0a204b65bfd59bd4e9eee5b988ea0f2cc24e424e0a204b65bfd59bd4e9eee5brefs/remotes/origin/master988ea0f2cc24e424e0a204b65bfd59bd4e9eee5b988ea0f2cc24e424e0a204b65bfd59bd4e9eee5brefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#92671542973990clubb_nvhpc_gpu_multi_col_avg_test #99false976SUCCESS1765014426390http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/9/READMEa5597665ed8bdd21902000712f8ad2685276eec01764639088000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comAdd blank line to README. 2025-12-01 19:31:28 -0600a5597665ed8bdd21902000712f8ad2685276eec0Add blank line to README.editREADMEsrc/CLUBB_core/penta_lu_solver.F90bba14c86a748da7993af72c056a9f6505cf43f1b1764747200000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comBIT_CHANGING bug fix for the penta_lu solver, only BC when using penta_solve_method=2 (#1264) 2025-12-03 01:33:20 -0600bba14c86a748da7993af72c056a9f6505cf43f1bBIT_CHANGING bug fix for the penta_lu solver, only BC when using penta_solve_method=2 (#1264)editsrc/CLUBB_core/penta_lu_solver.F90src/CLUBB_core/advance_xm_wpxp_module.F90jenkins_tests/clubb_plot_solver_compare/Jenkinsfilesrc/CLUBB_core/matrix_solver_wrapper.F90src/CLUBB_core/advance_wp2_wp3_module.F90src/CLUBB_core/CMakeLists.txtsrc/CLUBB_core/penta_bicgstab_solver.F9014f5e6e323b11dc9e5fff8ca5982c6ab7f92f8c11764884961000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comBicgstab addition (#1261) * Adding 'initial' bicgstab solver * Currently working, lots of diagnostic code still present * Pruning everything unneccesary, adding lots of comments, making names good. * Adding jenkins test to plot results with different solvers * jenkins script update * jenkins script update * jenkins script update * jenkins script update * jenkins script update * jenkins script update * jenkins script update * Removing print statement * Improved naming and comments * Removing print statement * A couple more comments. 2025-12-04 15:49:21 -060014f5e6e323b11dc9e5fff8ca5982c6ab7f92f8c1Bicgstab addition (#1261)editsrc/CLUBB_core/advance_xm_wpxp_module.F90addjenkins_tests/clubb_plot_solver_compare/Jenkinsfileeditsrc/CLUBB_core/matrix_solver_wrapper.F90editsrc/CLUBB_core/CMakeLists.txtaddsrc/CLUBB_core/penta_bicgstab_solver.F90editsrc/CLUBB_core/advance_wp2_wp3_module.F90src/CLUBB_core/penta_bicgstab_solver.F90988ea0f2cc24e424e0a204b65bfd59bd4e9eee5b1764902874000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduSmall bug fix to make gfortran+debug happy, without the _core_rknd this could be a potential type error 2025-12-04 20:47:54 -0600988ea0f2cc24e424e0a204b65bfd59bd4e9eee5bSmall bug fix to make gfortran+debug happy, without the _core_rknd this could be a potential type erroreditsrc/CLUBB_core/penta_bicgstab_solver.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse10http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/10/8http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/8/Started by an SCM change8040e9961b5b422803a0aa816c5921be9576aa4a8040e9961b5b422803a0aa816c5921be9576aa4a8refs/remotes/origin/master040e9961b5b422803a0aa816c5921be9576aa4a8040e9961b5b422803a0aa816c5921be9576aa4a8refs/remotes/origin/master040e9961b5b422803a0aa816c5921be9576aa4a8040e9961b5b422803a0aa816c5921be9576aa4a8refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#816355942973990clubb_nvhpc_gpu_multi_col_avg_test #88false812365SUCCESS1763977630965http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/8/src/CLUBB_core/advance_xp2_xpyp_module.F90d5703f0d199f44b4fb66df14b4ebfcdb14b57c191763924788000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMaking update_xp2_mc work with either grid mode (#1263) 2025-11-23 13:06:28 -0600d5703f0d199f44b4fb66df14b4ebfcdb14b57c19Making update_xp2_mc work with either grid mode (#1263)editsrc/CLUBB_core/advance_xp2_xpyp_module.F90src/CLUBB_core/fill_holes.F90src/CLUBB_core/clip_explicit.F90src/CLUBB_core/advance_wp2_wp3_module.F900da744a4b04f078044dcee08c614ad2a479167511763952429000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduImproving variable name 2025-11-23 20:47:09 -06000da744a4b04f078044dcee08c614ad2a47916751Improving variable nameeditsrc/CLUBB_core/advance_wp2_wp3_module.F90editsrc/CLUBB_core/clip_explicit.F90editsrc/CLUBB_core/fill_holes.F90src/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/stats_clubb_utilities.F90040e9961b5b422803a0aa816c5921be9576aa4a81763952752000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduSmall bug fix, but this is BIT_CHANGING because it affects stats output. Some zm fields (w_1_zm, w_2_zm, varnce_w_1_zm, varnce_w_2_zm, and mixt_frac_zm) were all nan in the netcdf output when l_call_pdf_closure_twice=.false., because those come from pdf_params_zm. 2025-11-23 20:52:32 -0600040e9961b5b422803a0aa816c5921be9576aa4a8Small bug fix, but this is BIT_CHANGING because it affects stats output. Some zm fields (w_1_zm, w_2_zm, varnce_w_1_zm, varnce_w_2_zm, and mixt_frac_zm) were all nan in the netcdf output when l_call_pdf_closure_twice=.false., because those come from pdf_params_zm.editsrc/CLUBB_core/stats_clubb_utilities.F90editsrc/CLUBB_core/advance_clubb_core_module.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse9http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/9/7http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/7/Started by an SCM change761aa970643913037e2766554210e4527bb5e817161aa970643913037e2766554210e4527bb5e8171refs/remotes/origin/master61aa970643913037e2766554210e4527bb5e817161aa970643913037e2766554210e4527bb5e8171refs/remotes/origin/master61aa970643913037e2766554210e4527bb5e817161aa970643913037e2766554210e4527bb5e8171refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#724289122973990clubb_nvhpc_gpu_multi_col_avg_test #77false712258SUCCESS1763459228262http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/7/src/CLUBB_core/model_flags.modsrc/CLUBB_core/error_code.mod61aa970643913037e2766554210e4527bb5e81711763408615000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving accidentally added files 2025-11-17 13:43:35 -060061aa970643913037e2766554210e4527bb5e8171Removing accidentally added filesdeletesrc/CLUBB_core/error_code.moddeletesrc/CLUBB_core/model_flags.modgithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse8http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/8/6http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/6/Started by an SCM change6de8bbefe59ca054f99b8f487c51d788558213a12de8bbefe59ca054f99b8f487c51d788558213a12refs/remotes/origin/masterde8bbefe59ca054f99b8f487c51d788558213a12de8bbefe59ca054f99b8f487c51d788558213a12refs/remotes/origin/masterde8bbefe59ca054f99b8f487c51d788558213a12de8bbefe59ca054f99b8f487c51d788558213a12refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#64083442973990clubb_nvhpc_gpu_multi_col_avg_test #66false612148SUCCESS1763200030416http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/6/src/CLUBB_core/fill_holes.F90src/CLUBB_core/clip_explicit.F90src/CLUBB_core/advance_wp2_wp3_module.F90src/CLUBB_core/error_code.F90compile.pysrc/CLUBB_core/error_code.modde8bbefe59ca054f99b8f487c51d788558213a121763184888000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduMaking clubb_at_least_debug_level not a device routine. It confuses the poor little nvidia compiler when compiling inside cam. Also making the compile script a little more robust. 2025-11-14 23:34:48 -0600de8bbefe59ca054f99b8f487c51d788558213a12Making clubb_at_least_debug_level not a device routine. It confuses the poor little nvidia compiler when compiling inside cam. Also making the compile script a little more robust.editsrc/CLUBB_core/error_code.F90editsrc/CLUBB_core/clip_explicit.F90editsrc/CLUBB_core/advance_wp2_wp3_module.F90editcompile.pyeditsrc/CLUBB_core/fill_holes.F90addsrc/CLUBB_core/error_code.modgithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse7http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/7/5http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/5/Started by an SCM change550a5528a55591d69e8b704dccebe1e7d6baa266950a5528a55591d69e8b704dccebe1e7d6baa2669refs/remotes/origin/master50a5528a55591d69e8b704dccebe1e7d6baa266950a5528a55591d69e8b704dccebe1e7d6baa2669refs/remotes/origin/master50a5528a55591d69e8b704dccebe1e7d6baa266950a5528a55591d69e8b704dccebe1e7d6baa2669refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#522353532973990clubb_nvhpc_gpu_multi_col_avg_test #55false512035SUCCESS1763113630565http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/5/compile/file_list/G_unit_tests_filessrc/G_unit_test_types/fill_holes_tests.F90src/G_unit_tests.F90src/CLUBB_core/advance_wp2_wp3_module.F90run_scripts/fill_holes.pyjenkins_tests/clubb_G_unit_gfortran_tests/JenkinsfileCMakeLists.txtsrc/Microphys/advance_microphys_module.F90src/clubb_tuner.F90src/CLUBB_core/output_netcdf.F90src/G_unit_test_types/CMakeLists.txtsrc/CLUBB_core/model_flags.F90src/G_unit_test_types/pdf_parameter_tests.F90compile.pyrun_scripts/run_timestep_tests.pysrc/G_unit_test_types/spurious_source_test.F90cmake/deps/GPTLDependency.cmakerun_scripts/run_G_unit_tests.pyinput/tunable_parameters_compatible_r8029/configurable_model_flags.insrc/CLUBB_core/model_flags.modrun_scripts/run_scm.pysrc/CLUBB_core/advance_xp2_xpyp_module.F90src/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/advance_xm_wpxp_module.F90src/clubb_driver.F90cmake/utils/CPPDefinitions.cmakesrc/CLUBB_core/CMakeLists.txtsrc/CLUBB_core/clubb_api_module.F90src/CLUBB_core/fill_holes.F90src/CMakeLists.txtinput/tunable_parameters/configurable_model_flags.in665f3896481654acdb49de9afae25d7a9b24a81c1763082040000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comNew fill_holes methods (#1262) * Adding little code bits to help explore fill_holes. This is just a diagnostic playground * Improvements * Maybe better algorithm? * Improvements to the new fill holes * Nice progress * Small tweaks * Mainly adding gptl option for cmake and new run_timestep_tests.py * Making namelist input for fill type, and adding ANOTHER new filler that should be completely parallelizable, but right now large hole groups steal too much from nearby points and it looks kinda bad. * Big improvements, new algorithm is good now * Small updates * Making new fill_holes_type flag for clubb_config_flags * New hybrid filler * Small fixes * Changes, mainly for performance, also adding -gptl option to compile.py to make it use the gptl library * Bunch of things * Updates * small fix * Various cleanup and comments * Small improvement to p_atomic * Updates for speed mainly * Small improvement to p_atomic * Potential improvement to p_atomic * Updates for speed mainly * Updates to make G_unit fill holes test * Improving new tests and making widening_windows and smart_window work in flipped grid mode * All methods passing G_unit test, still need a little cleanup * Slight comments update * Cleanup * Adding named constants for fill type * Uncommentting source checks after compile * Adding new file to old compile method * Small fixes * Small fixes * Mainly comments * Making G_unit test use the new python script and compiler method. Small bug fix too * Little fixes 2025-11-13 19:00:40 -0600665f3896481654acdb49de9afae25d7a9b24a81cNew fill_holes methods (#1262)editcmake/utils/CPPDefinitions.cmakeeditsrc/CLUBB_core/fill_holes.F90editsrc/G_unit_test_types/pdf_parameter_tests.F90editsrc/Microphys/advance_microphys_module.F90editrun_scripts/run_scm.pyeditsrc/G_unit_test_types/spurious_source_test.F90addsrc/G_unit_test_types/fill_holes_tests.F90addrun_scripts/run_G_unit_tests.pyeditcompile.pyeditsrc/CLUBB_core/advance_wp2_wp3_module.F90editsrc/CLUBB_core/model_flags.F90editsrc/CLUBB_core/CMakeLists.txteditsrc/CLUBB_core/clubb_api_module.F90editsrc/CMakeLists.txteditsrc/CLUBB_core/advance_xp2_xpyp_module.F90addcmake/deps/GPTLDependency.cmakeeditCMakeLists.txteditinput/tunable_parameters/configurable_model_flags.ineditsrc/CLUBB_core/output_netcdf.F90editsrc/G_unit_tests.F90editcompile/file_list/G_unit_tests_filesaddsrc/CLUBB_core/model_flags.modeditsrc/clubb_tuner.F90addrun_scripts/fill_holes.pyeditsrc/G_unit_test_types/CMakeLists.txteditsrc/CLUBB_core/advance_clubb_core_module.F90editinput/tunable_parameters_compatible_r8029/configurable_model_flags.inaddrun_scripts/run_timestep_tests.pyeditjenkins_tests/clubb_G_unit_gfortran_tests/Jenkinsfileeditsrc/clubb_driver.F90editsrc/CLUBB_core/advance_xm_wpxp_module.F90microphysics.F909745207a28bd22786d72673afd580fbc5f17938b1763082148000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMaking compatible with new version of clubb (#167) 2025-11-13 19:02:28 -06009745207a28bd22786d72673afd580fbc5f17938bMaking compatible with new version of clubb (#167)editmicrophysics.F90src/CLUBB_core/fill_holes.F9050a5528a55591d69e8b704dccebe1e7d6baa26691763105789000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduSmall bug fix in fill_holes_parallel on GPU 2025-11-14 01:36:29 -060050a5528a55591d69e8b704dccebe1e7d6baa2669Small bug fix in fill_holes_parallel on GPUeditsrc/CLUBB_core/fill_holes.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse6http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/6/4http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/4/Started by an SCM change4ea0b892fd2c25049cb5d1429994dc80e4ab6ed9fea0b892fd2c25049cb5d1429994dc80e4ab6ed9frefs/remotes/origin/masterea0b892fd2c25049cb5d1429994dc80e4ab6ed9fea0b892fd2c25049cb5d1429994dc80e4ab6ed9frefs/remotes/origin/masterea0b892fd2c25049cb5d1429994dc80e4ab6ed9fea0b892fd2c25049cb5d1429994dc80e4ab6ed9frefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#43924172973990clubb_nvhpc_gpu_multi_col_avg_test #44false411832SUCCESS1759999629314http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/4/src/Microphys/Morrison_microphys/Changes_M2005src/Morrison_microphys/microphysics.F90src/Microphys/Morrison_microphys/microphysics.F90src/Microphys/Morrison_microphys/CMakeLists.txtsrc/Morrison_microphys/module_mp_graupel.F90src/Microphys/CMakeLists.txtsrc/Morrison_microphys/Changes_M2005src/Microphys/Morrison_microphys/README.MICRO_M2005src/Microphys/Morrison_microphys/module_mp_graupel.F90src/Microphys/Changes_M2005src/Morrison_microphys/README.MICRO_M2005src/Microphys/module_mp_graupel.F90compile/file_list/clubb_morrison_filessrc/Microphys/microphysics.F90ea0b892fd2c25049cb5d1429994dc80e4ab6ed9f1759963163000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduAdding Morrison_microphys folder inside Microphys and reflecting change in compilation files. This is to make this new structure work with the way we include Morrison code, which is brought in from sam_clubb via the updateClubbMorrison.sh found in sys_admin/gitUpdateScripts/ 2025-10-08 17:39:23 -0500ea0b892fd2c25049cb5d1429994dc80e4ab6ed9fAdding Morrison_microphys folder inside Microphys and reflecting change in compilation files. This is to make this new structure work with the way we include Morrison code, which is brought in from sam_clubb via the updateClubbMorrison.sh found in sys_admin/gitUpdateScripts/deletesrc/Morrison_microphys/microphysics.F90addsrc/Microphys/Morrison_microphys/CMakeLists.txtdeletesrc/Morrison_microphys/README.MICRO_M2005editcompile/file_list/clubb_morrison_filesdeletesrc/Microphys/Changes_M2005addsrc/Microphys/Morrison_microphys/Changes_M2005deletesrc/Microphys/microphysics.F90addsrc/Microphys/Morrison_microphys/module_mp_graupel.F90addsrc/Microphys/Morrison_microphys/README.MICRO_M2005deletesrc/Morrison_microphys/module_mp_graupel.F90addsrc/Microphys/Morrison_microphys/microphysics.F90editsrc/Microphys/CMakeLists.txtdeletesrc/Morrison_microphys/Changes_M2005deletesrc/Microphys/module_mp_graupel.F90githttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse5http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/5/3http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/3/Started by an SCM change3194887296834904671023aaea076cb176ae650e5194887296834904671023aaea076cb176ae650e5refs/remotes/origin/master194887296834904671023aaea076cb176ae650e5194887296834904671023aaea076cb176ae650e5refs/remotes/origin/master194887296834904671023aaea076cb176ae650e5194887296834904671023aaea076cb176ae650e5refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#34301222973990clubb_nvhpc_gpu_multi_col_avg_test 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driver upgrades part2 (#1257) * Initial commit. Breaking up clubb driver into sections. This should be bfb on everything, but this hasn't been checked well yet. * Combining namelist read into case init, same stuff really * Reorganizing many things, mainly in the pursuit of sectioning off code into groups like Microphys or Radiation * Organizing clubb_driver. All cases still BFB. * Mostly cosmetic improvements * Small improvements, comments, making clubb_driver_test to ensure consistency functionality of new compartmentalized model run components * Removing accidentally added files. * Mostly breaking up structure initialization behavior, split into init_ and zero_ so that we don't have to allocate to reset. * Doing away with clubb_model_settings and parameters_module in the spirit of consolidating functionality and spiting module variables. * Missed some changes to commit, should've been included in previous commit * Splitting up funcionality of setup_parameters. Now theres one part that calculates and another checks flag values. * GPU code working, but not BFB yet * GPU all BFB with mutliple columns, except gabls3, and driver test doesnt work (pass reinitialize, fails double timestep test) * Turning off multi_column output for the new driver test * Changes needed after rebase * Name changes, comments, and threadprivate additions for parallel runs * Adding variables to openacc data statements. Without this, the code crashes when using the GPU with l_godunov_upwind_xpyp_ta=.true. * Modifying compiler configurations (mainly optimization level) in order to prepare for switching scipts and tests to cmake, specifically separating out this BIT_CHANGING commit from the rest * thlm_ed and rtm_ed caused GPU errors since those variables were added to a acc loop, but never added to the acc data statement. This change makes it so they're only calculated on the CPU, since they are only used for stats, fixing the issue without adding the GPU memory footprint. * Adding -Mstack_arrays to the nvfortran flags causes us to use more stack space, which means we need to allow processes to use more stack space (when using lots of columns, since that increases memory footprint). We do by using using 'ulimit BIGNUMBER'. * Making old compiler script work with new file structure, also making Input_fields directory and library. * Missed text_writer_lib * Undoing Input_fields directory, it has too many depencencies currently, certainly can be simplified with argument lists. * Adding library dependency * Small changes to cmake list * Adding openmp flag back to gfortran script, needed for jenkins test * Making the init_inputfields get called for restarts too, because restart code call input_field code. * Making pdf_implicit_coefs_terms conditional in generalized grid test * Adding microphys directory to acc_to_omp script * Renaming -iters option in run_scm.py to -max_iters * Making run_scm_all.py and new driver test * Test and script improvements * Limiting iterations in jenkins test * Name change * adding ulimit * name update * jenkins script update * jenkins script update * jenkins script update * jenkins script update * jenkins script and run_scm_all.py update * jenkins script update * Turning calc_lmin_nu into calc_derrived_params, which is more general, and now calculates mixt_frac_max_mag * Small improvement for GPU * Small updates needed for host model integration * Removing accidentally added file * Small cleanup 2025-10-05 20:45:58 -05001f751ddf9c56cfa707bc5b302f0bc3b40c708a8dClubb driver upgrades part2 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by an SCM change2df9e2152bc4889d33e801021a44c11fd6b685d1fdf9e2152bc4889d33e801021a44c11fd6b685d1frefs/remotes/origin/masterdf9e2152bc4889d33e801021a44c11fd6b685d1fdf9e2152bc4889d33e801021a44c11fd6b685d1frefs/remotes/origin/masterdf9e2152bc4889d33e801021a44c11fd6b685d1fdf9e2152bc4889d33e801021a44c11fd6b685d1frefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#25804032973990clubb_nvhpc_gpu_multi_col_avg_test #22false211654SUCCESS1759567628290http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/2/compile/config/linux_x86_64_gfortran.bashdf9e2152bc4889d33e801021a44c11fd6b685d1f1759522935000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduMust add -fopenmp back for now, since this is used for the openmp test and it also broke the BFB tests for an obnoxious reason - that test compiles each commit without cleaning the build, so the baseline commit had -fopenmp and compiled with openmp stuff enabled, but then the subsequent commits had it turned off, but no changes in the files, so it didn't recompile with it off, and only turned it off in the linking stage, causing a build error. RESOLVED:320551df13ee84bdb9280db0be788a36e1f03494 RESOLVED:6c0201d44694fadf7f4bb0d4d58c3a9871096a22 RESOLVED:26644de2ea83ee6335b273f54dd57afc8f6f4b0c 2025-10-03 15:22:15 -0500df9e2152bc4889d33e801021a44c11fd6b685d1fMust add -fopenmp back for now, since this is used for the openmp test and it also broke the BFB tests for an obnoxious reason - that test compiles each commit without cleaning the build, so the baseline commit had -fopenmp and compiled with openmp stuff enabled, but then the subsequent commits had it turned off, but no changes in the files, so it didn't recompile with it off, and only turned it off in the linking stage, causing a build error. 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trad coriolis (#1267) * Updating the clubb core and silhs version files * Fixing bug. qclvar copying is handled by the api, but we were deleting it with an unstructured data statement. I added this due as a fix before thinking qclvar was a local variable, which happened because I mixed up the CLUBB_CAM and CLUBBND_CAM flags. https://github.com/larson-group/cam/issues/175 * Fixing GPU bug. There is a vertical dependency with wpxp. This is what was breaking the ECT test, see larson-group/cam#175 * Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test. * Moving PosInf to clubb_model_settings.F90 * Updating the clubb core and silhs version files * Add flags for the Coriolis terms. * Pass fcory from api module into advance module * Implement the traditional Coriolis terms * Implement the nontraditional Coriolis terms * Add stats variables for the Coriolis terms * Compute Coriolis parameters from namelist latitude * Create the coriolis_test case * Tune the coriolis_test case. However, oscillation frequency is too slow * Correct a coefficient in Coriolis. "coriolis_test" matches analytical * Update advance_clubb_core_module.F90 Rename fcory as fcor_y and add description * Update advance_wp2_wp3_module.F90 Rename fcory as fcor_y and add description * Update advance_xm_wpxp_module.F90 Rename fcory as fcor_y and add description * Update advance_xp2_xpyp_module.F90 Rename fcory as fcor_y and add description * Update clubb_api_module.F90 Rename fcory as fcor_y and add description * Update spurious_source_test.F90 Rename fcory as fcor_y and add description * Update clubb_driver.F90 Rename fcor as fcor_y and add description. Also, add description for the coriolis_test * Update generalized_grid_test.F90 Rename fcory as fcor_y and add description. * Update coriolis_test_model.in Add description for the Coriolis test case * Stablize the cgils_s6 case with smaller time step * Create the ekman case * Tune the ekman case to match LES * Compute wp2up with PDF and pass along with wp2thvp * Implement the nontraditional Coriolis term for wp3 * Fine-tune parameters for the ekman case * Create the atex_long case * Retune ekman case with l_vary_convect_depth = .true. * Fine-tune the atex_long case * Add atex_long case to pyplotgen * Fine-tune atex_long case with less radical changes * Updating the clubb core and silhs version files * Small bug fix in the wp2up flip and adding new files to the cmakelist * Renmaing, moving some files, and reverting change to cgils_s6 timestep * Adding new flags to flag test file * Updating comment for fcor_y calculation explanation * Removing accidentally added file --------- Co-authored-by: pickett <larsongroupgithub@gmail.com> Co-authored-by: Hing Ong <hing.ong@anl.gov> Co-authored-by: Hing Ong <36782452+HingOng@users.noreply.github.com> 2026-01-08 14:23:44 -06004902a5ccf6c0da1bf588ea853aaadbc9a776dfa2Non trad coriolis 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#1212false12395FAILURE1767952027463http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/12/input/case_setups/atex_long_edsclr_sounding.ininput/stats/standard_stats.insrc/CLUBB_core/advance_wp2_wp3_module.F90input/case_setups/coriolis_test_edsclr_sounding.insrc/CLUBB_core/pdf_closure_module.F90input/case_setups/atex_long_sfc.ininput/tunable_parameters_coriolis_cases/ekman_parameters.ininput/tunable_parameters_coriolis_cases/atex_long_parameters.insrc/clubb_tuner.F90input/case_setups/coriolis_test_sfc.insrc/CLUBB_core/output_netcdf.F90src/CLUBB_core/model_flags.F90input/case_setups/cgils_s6_model.ininput/case_setups/coriolis_test_sounding.insrc/G_unit_test_types/pdf_parameter_tests.F90input/case_setups/ekman_sfc.ininput/stats/scalars_stats.insrc/generalized_grid_test.F90input/case_setups/coriolis_test_sclr_sounding.ininput/case_setups/ekman_edsclr_sounding.ininput/stats/all_stats.insrc/Benchmark_cases/ekman.F90src/CLUBB_core/advance_xp2_xpyp_module.F90src/CLUBB_core/advance_xm_wpxp_module.F90input/case_setups/ekman_sclr_sounding.ininput/tunable_parameters_coriolis_cases/coriolis_test_parameters.insrc/CLUBB_core/clubb_api_module.F90input/case_setups/coriolis_test_model.ininput/stats/nobudgets_nomicro_stats.insrc/Benchmark_cases/prescribe_forcings.F90input/tunable_parameters/configurable_model_flags.insrc/Benchmark_cases/atex_long.F90src/CLUBB_core/stats_variables.F90src/CLUBB_core/grid_adaptation_module.F90run_scripts/run_bindiff_w_flags_config_core_flags.jsoninput/case_setups/ekman_model.insrc/Benchmark_cases/CMakeLists.txtpostprocessing/pyplotgen/config/Case_definitions.pyinput/stats/host_budgets_stats.insrc/CLUBB_core/stats_clubb_utilities.F90input/case_setups/atex_long_model.ininput/stats/nobudgets_stats.insrc/G_unit_test_types/spurious_source_test.F90src/input_fields.F90input/case_setups/atex_long_sounding.insrc/CLUBB_core/numerical_check.F90compile/file_list/clubb_model_filessrc/CLUBB_core/stats_zm_module.F90src/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/constants_clubb.F90src/clubb_driver.F90src/CLUBB_core/stats_zt_module.F90input/case_setups/ekman_sounding.ininput/stats/nightly_stats.ininput/case_setups/atex_long_sclr_sounding.in4902a5ccf6c0da1bf588ea853aaadbc9a776dfa21767903824000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comNon trad coriolis (#1267) * Updating the clubb core and silhs version files * Fixing bug. qclvar copying is handled by the api, but we were deleting it with an unstructured data statement. I added this due as a fix before thinking qclvar was a local variable, which happened because I mixed up the CLUBB_CAM and CLUBBND_CAM flags. https://github.com/larson-group/cam/issues/175 * Fixing GPU bug. There is a vertical dependency with wpxp. This is what was breaking the ECT test, see larson-group/cam#175 * Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test. * Moving PosInf to clubb_model_settings.F90 * Updating the clubb core and silhs version files * Add flags for the Coriolis terms. * Pass fcory from api module into advance module * Implement the traditional Coriolis terms * Implement the nontraditional Coriolis terms * Add stats variables for the Coriolis terms * Compute Coriolis parameters from namelist latitude * Create the coriolis_test case * Tune the coriolis_test case. However, oscillation frequency is too slow * Correct a coefficient in Coriolis. "coriolis_test" matches analytical * Update advance_clubb_core_module.F90 Rename fcory as fcor_y and add description * Update advance_wp2_wp3_module.F90 Rename fcory as fcor_y and add description * Update advance_xm_wpxp_module.F90 Rename fcory as fcor_y and add description * Update advance_xp2_xpyp_module.F90 Rename fcory as fcor_y and add description * Update clubb_api_module.F90 Rename fcory as fcor_y and add description * Update spurious_source_test.F90 Rename fcory as fcor_y and add description * Update clubb_driver.F90 Rename fcor as fcor_y and add description. Also, add description for the coriolis_test * Update generalized_grid_test.F90 Rename fcory as fcor_y and add description. * Update coriolis_test_model.in Add description for the Coriolis test case * Stablize the cgils_s6 case with smaller time step * Create the ekman case * Tune the ekman case to match LES * Compute wp2up with PDF and pass along with wp2thvp * Implement the nontraditional Coriolis term for wp3 * Fine-tune parameters for the ekman case * Create the atex_long case * Retune ekman case with l_vary_convect_depth = .true. * Fine-tune the atex_long case * Add atex_long case to pyplotgen * Fine-tune atex_long case with less radical changes * Updating the clubb core and silhs version files * Small bug fix in the wp2up flip and adding new files to the cmakelist * Renmaing, moving some files, and reverting change to cgils_s6 timestep * Adding new flags to flag test file * Updating comment for fcor_y calculation explanation * Removing accidentally added file --------- Co-authored-by: pickett <larsongroupgithub@gmail.com> Co-authored-by: Hing Ong <hing.ong@anl.gov> Co-authored-by: Hing Ong <36782452+HingOng@users.noreply.github.com> 2026-01-08 14:23:44 -06004902a5ccf6c0da1bf588ea853aaadbc9a776dfa2Non trad coriolis (#1267)editsrc/CLUBB_core/model_flags.F90editsrc/CLUBB_core/pdf_closure_module.F90addinput/case_setups/ekman_model.ineditsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/generalized_grid_test.F90editinput/case_setups/cgils_s6_model.inaddinput/case_setups/atex_long_model.ineditinput/stats/standard_stats.ineditsrc/Benchmark_cases/CMakeLists.txteditsrc/clubb_driver.F90addinput/case_setups/atex_long_edsclr_sounding.inaddinput/case_setups/atex_long_sfc.ineditsrc/G_unit_test_types/pdf_parameter_tests.F90addinput/case_setups/ekman_sounding.inaddinput/case_setups/coriolis_test_sfc.ineditsrc/CLUBB_core/advance_xm_wpxp_module.F90addinput/case_setups/ekman_edsclr_sounding.ineditsrc/CLUBB_core/numerical_check.F90editsrc/CLUBB_core/advance_wp2_wp3_module.F90addinput/case_setups/ekman_sclr_sounding.inaddinput/case_setups/atex_long_sclr_sounding.ineditinput/stats/scalars_stats.inaddsrc/Benchmark_cases/ekman.F90addinput/tunable_parameters_coriolis_cases/coriolis_test_parameters.inaddinput/case_setups/coriolis_test_sounding.inaddsrc/Benchmark_cases/atex_long.F90editsrc/CLUBB_core/stats_variables.F90addinput/case_setups/atex_long_sounding.ineditsrc/Benchmark_cases/prescribe_forcings.F90editinput/stats/nightly_stats.inaddinput/case_setups/ekman_sfc.ineditpostprocessing/pyplotgen/config/Case_definitions.pyeditsrc/G_unit_test_types/spurious_source_test.F90editinput/stats/host_budgets_stats.ineditinput/stats/nobudgets_nomicro_stats.ineditsrc/CLUBB_core/advance_xp2_xpyp_module.F90addinput/case_setups/coriolis_test_edsclr_sounding.inaddinput/tunable_parameters_coriolis_cases/ekman_parameters.inaddinput/tunable_parameters_coriolis_cases/atex_long_parameters.ineditinput/stats/all_stats.ineditsrc/CLUBB_core/grid_adaptation_module.F90editcompile/file_list/clubb_model_fileseditrun_scripts/run_bindiff_w_flags_config_core_flags.jsoneditsrc/CLUBB_core/clubb_api_module.F90editsrc/CLUBB_core/stats_zm_module.F90addinput/case_setups/coriolis_test_sclr_sounding.ineditsrc/input_fields.F90editsrc/CLUBB_core/stats_clubb_utilities.F90editsrc/CLUBB_core/output_netcdf.F90editsrc/CLUBB_core/constants_clubb.F90editsrc/CLUBB_core/stats_zt_module.F90addinput/case_setups/coriolis_test_model.ineditsrc/clubb_tuner.F90editinput/stats/nobudgets_stats.ineditinput/tunable_parameters/configurable_model_flags.ininput/case_setups/cgils_s6_model.insrc/CLUBB_core/advance_wp2_wp3_module.F90src/CLUBB_core/advance_xp2_xpyp_module.F908033a1492b3b2ce6c8d314942d2fba00669188c31767951630000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduGPU fixed and cgils_s6 fix 2026-01-09 03:40:30 -06008033a1492b3b2ce6c8d314942d2fba00669188c3GPU fixed and cgils_s6 fixeditinput/case_setups/cgils_s6_model.ineditsrc/CLUBB_core/advance_wp2_wp3_module.F90editsrc/CLUBB_core/advance_xp2_xpyp_module.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse13http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/13/11http://carson.math.uwm.edu/jenkins/job/clubb_nvhpc_gpu_multi_col_avg_test/11/18truetruefalsefalse