Started by user Gunther Huebler Obtained jenkins_tests/clubb_new_tuner_test/Jenkinsfile from git https://github.com/larson-group/clubb.git [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor Running on mitch in /home/jenkins/workspace/clubb_new_tuner_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Fetching changes from the remote Git repository Checking out Revision 955aa780e3a47b6accf7af68d85f76ad53baff39 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/jenkins/workspace/clubb_new_tuner_test/.git # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' using GIT_ASKPASS to set credentials larsongroupsysadmin github token > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 955aa780e3a47b6accf7af68d85f76ad53baff39 # timeout=10 Commit message: "Removing unused variables" > git rev-list --no-walk 2ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fb # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Compile) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + ./compile.py -debug -python -- Compiling with double precision -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/include -- ENABLE_F2PY=ON with USE_NetCDF=ON: reusing CMake-built CLUBB libraries -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_new_tuner_test/build/gcc_DEBUG_PRECdouble_PYTHON Using inferred toolchain file: /home/jenkins/workspace/clubb_new_tuner_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_new_tuner_test/build/gcc_DEBUG_PRECdouble_PYTHON Setting CLUBB installation dir: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON about to cmnake /home/jenkins/workspace/clubb_new_tuner_test/build/gcc_DEBUG_PRECdouble_PYTHON Running CMake configure... Scanning dependencies of target scm_activation_lib [ 1%] Built target scm_activation_lib Scanning dependencies of target clubb_lapack_shared Scanning dependencies of target clubb_lapack_single [ 1%] Built target clubb_lapack_shared [ 17%] Built target clubb_lapack_single Scanning dependencies of target clubb_lapack_double [ 33%] Built target clubb_lapack_double [ 34%] Built target lapack_lib Scanning dependencies of target clubb_core_lib [ 35%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_wrap.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_closure_module.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o [ 37%] Linking Fortran static library libclubb_core_lib.a [ 47%] Built target clubb_core_lib Scanning dependencies of target microphys_utils_lib Scanning dependencies of target coamps_lib Scanning dependencies of target text_writer_lib [ 47%] Built target microphys_utils_lib Scanning dependencies of target bugsrad_lib [ 53%] Built target text_writer_lib [ 57%] Built target coamps_lib Scanning dependencies of target morrison_microphys_lib [ 62%] Built target bugsrad_lib Scanning dependencies of target KK_microphys_lib [ 62%] Built target morrison_microphys_lib [ 65%] Built target KK_microphys_lib Scanning dependencies of target silhs_lib [ 67%] Built target silhs_lib Scanning dependencies of target numerical_recipes_lib Scanning dependencies of target radiation_lib [ 70%] Built target numerical_recipes_lib [ 71%] Built target radiation_lib Scanning dependencies of target input_fields_lib [ 71%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o [ 71%] Linking Fortran static library libinput_fields_lib.a [ 73%] Built target input_fields_lib Scanning dependencies of target G_unit_test_lib Scanning dependencies of target microphys_lib Scanning dependencies of target benchmark_cases_lib [ 73%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o [ 73%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o [ 73%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o [ 79%] Built target benchmark_cases_lib [ 80%] Linking Fortran static library libmicrophys_lib.a [ 82%] Built target microphys_lib Scanning dependencies of target clubb_driver_lib [ 82%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o [ 83%] Linking Fortran static library libG_unit_test_lib.a [ 85%] Built target G_unit_test_lib Scanning dependencies of target G_unit_tests [ 85%] Linking Fortran executable G_unit_tests [ 85%] Built target G_unit_tests [ 85%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o [ 85%] Linking Fortran static library libclubb_driver_lib.a [ 85%] Built target clubb_driver_lib Scanning dependencies of target clubb_driver_test Scanning dependencies of target clubb_standalone Scanning dependencies of target clubb_thread_test Scanning dependencies of target clubb_standalone_loss Scanning dependencies of target clubb_loss_driver_test Scanning dependencies of target clubb_tuner [ 85%] Linking Fortran executable clubb_driver_test [ 86%] Linking Fortran executable clubb_standalone Scanning dependencies of target clubb_f2py_backend [ 86%] Linking Fortran executable clubb_standalone_loss [ 86%] Linking Fortran executable clubb_thread_test [ 86%] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o [ 86%] Linking Fortran executable clubb_loss_driver_test [ 87%] Building Fortran object clubb_python_api/CMakeFiles/clubb_f2py_backend.dir/f2py_fortran_wrappers/pdf_closure_module_wrapper.F90.o [ 87%] Building Fortran object clubb_python_api/CMakeFiles/clubb_f2py_backend.dir/f2py_fortran_wrappers/advance_windm_edsclrm_module_wrapper.F90.o [ 87%] Built target clubb_thread_test [ 87%] Linking Fortran shared library ../../../clubb_python_api/libclubb_f2py_backend.so [ 88%] Built target clubb_driver_test [ 88%] Built target clubb_loss_driver_test [ 88%] Built target clubb_standalone_loss [ 88%] Built target clubb_standalone [ 88%] Linking Fortran executable clubb_tuner [ 99%] Built target clubb_f2py_backend [ 99%] Building clubb_f2py extension via numpy.f2py (reusing CMake-built CLUBB libs) running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building extension "clubb_f2py" sources creating /tmp/tmpzptckvp_/src.linux-x86_64-3.10 f2py options: [] f2py: clubb_f2py.pyf [100%] Built target clubb_tuner rmbadname1: Replacing "flen" with "flen_bn". rmbadname1: Replacing "flen" with "flen_bn". rmbadname1: Replacing "flen" with "flen_bn". Reading fortran codes... Reading file 'clubb_f2py.pyf' (format:free) Post-processing... Block: clubb_f2py Block: set_grid Block: get_grid Block: set_sclr_idx Block: get_sclr_idx Block: set_nu_vert_res_dep Block: get_nu_vert_res_dep Block: get_err_info_dims Block: get_err_code Block: f2py_init_pressure Block: f2py_get_grid_dims Block: f2py_get_grid_shape Block: f2py_band_solve_multiple_rhs Block: f2py_tridiag_solve_single_rhs_multiple_lhs Block: f2py_tridiag_solve_multiple_rhs Block: f2py_lapack_gtsv Block: f2py_lapack_gtsvx Block: f2py_lapack_gbsv Block: f2py_lapack_gbsvx Block: f2py_lapack_potrf Block: f2py_lapack_poequ Block: f2py_lapack_laqsy Block: f2py_lapack_syev Block: f2py_lapack_tridiag_solve Block: f2py_lapack_tridiag_solvex Block: f2py_lapack_band_solve Block: f2py_lapack_band_solvex Block: f2py_penta_bicgstab_solve Block: f2py_penta_lu_solve_single_rhs_multiple_lhs Block: f2py_penta_lu_solve_multiple_rhs_lhs Block: f2py_tridiag_lu_solve_single_rhs_lhs Block: f2py_tridiag_lu_solve_single_rhs_multiple_lhs Block: f2py_tridiag_lu_solve_multiple_rhs_lhs Block: f2py_thlm2t_in_k_1d Block: f2py_init_err_info Block: f2py_set_default_config_flags Block: f2py_init_config_flags Block: f2py_setup_grid Block: f2py_get_nparams Block: f2py_init_clubb_params Block: f2py_get_param_names Block: f2py_init_clubb_params_file Block: f2py_calc_derrived_params Block: f2py_init_clubb_loss Block: f2py_get_clubb_params_all Block: f2py_clubb_get_loss_for_params Block: f2py_finalize_clubb_loss Block: f2py_init_pdf_params Block: f2py_init_pdf_params_zm Block: f2py_init_pdf_implicit Block: f2py_cubic_solve Block: f2py_quadratic_solve Block: get_pdf_params_dims Block: get_pdf_params_fields Block: set_pdf_params_fields Block: get_implicit_coefs_dims Block: get_implicit_coefs_fields Block: get_implicit_coefs_fields_2d Block: set_implicit_coefs_fields Block: set_implicit_coefs_fields_2d Block: f2py_stats_init Block: f2py_stats_init_with_params Block: f2py_stats_finalize Block: f2py_get_stats_config Block: f2py_get_stats_var_meta Block: f2py_get_stats_var_data Block: f2py_set_stats_var_data Block: f2py_stats_begin_timestep Block: f2py_stats_end_timestep Block: f2py_stats_update_scalar Block: f2py_stats_update_1d Block: f2py_stats_update_2d Block: f2py_stats_begin_budget_scalar Block: f2py_stats_begin_budget_1d Block: f2py_stats_begin_budget_2d Block: f2py_stats_update_budget_scalar Block: f2py_stats_update_budget_1d Block: f2py_stats_update_budget_2d Block: f2py_stats_finalize_budget_scalar Block: f2py_stats_finalize_budget_1d Block: f2py_stats_finalize_budget_2d Block: f2py_var_on_stats_list Block: f2py_stats_update_grid Block: f2py_stats_lh_samples_init Block: f2py_stats_lh_samples_write_ln Block: f2py_stats_lh_samples_write_u Block: f2py_prescribe_forcings Block: f2py_advance_clubb_core Block: f2py_calculate_thvm Block: f2py_hydrostatic Block: f2py_zt2zm_2d Block: f2py_zm2zt_2d Block: f2py_zt2zm2zt_2d Block: f2py_ddzm_2d Block: f2py_ddzt_2d Block: f2py_sat_mixrat_liq_2d Block: f2py_sat_mixrat_ice_2d Block: f2py_rcm_sat_adj Block: f2py_calculate_thlp2_rad Block: f2py_cos_solar_zen Block: f2py_set_simplified_radiation_params Block: f2py_sunray_sw Block: f2py_zero_pdf_params Block: f2py_zero_pdf_implicit_coefs_terms Block: f2py_check_clubb_settings Block: f2py_check_parameters Block: f2py_set_clubb_debug_level Block: f2py_cleanup_grid Block: f2py_setup_grid_heights Block: f2py_read_grid_heights Block: f2py_cleanup_err_info Block: f2py_set_err_info_values Block: f2py_get_err_info_values Block: f2py_reset_err_code Block: f2py_initialize_error_headers Block: f2py_file_read_1d Block: f2py_julian2gregorian_date Block: f2py_gregorian2julian_day Block: f2py_leap_year Block: f2py_lin_interpolate_two_points Block: f2py_mono_cubic_interp Block: f2py_zlinterp_fnc Block: f2py_calc_ri_zm Block: f2py_vertical_avg Block: f2py_vertical_integral Block: f2py_zm2zt2zm_2d Block: f2py_pvertinterp Block: f2py_compute_current_date Block: f2py_set_lscale_max Block: f2py_term_ma_zt_lhs Block: f2py_term_ma_zm_lhs Block: f2py_diffusion_zt_lhs Block: f2py_diffusion_zm_lhs Block: f2py_smooth_heaviside_peskin Block: f2py_smooth_max_scalar_array Block: f2py_smooth_max_array_scalar Block: f2py_smooth_min_scalar_array Block: f2py_smooth_min_array_scalar Block: f2py_calc_xpwp_2d Block: f2py_calc_ddzt_umvm_sqd Block: f2py_calc_wp3_on_wp2 Block: f2py_lscale_width_vert_avg Block: f2py_wp23_term_splat_lhs Block: f2py_smooth_corr_quotient Block: f2py_calc_comp_corrs_binormal Block: f2py_mean_l2n Block: f2py_stdev_l2n Block: f2py_corr_nn2nl Block: f2py_corr_nn2ll Block: f2py_compute_mean_binormal Block: f2py_compute_variance_binormal Block: f2py_calc_corr_chi_x Block: f2py_calc_corr_eta_x Block: f2py_nc_in_cloud_to_ncnm Block: f2py_cholesky_factor Block: f2py_mirror_lower_triangular_matrix Block: f2py_diagnose_correlations Block: f2py_calc_cholesky_corr_mtx_approx Block: f2py_skx_func Block: f2py_lg_2005_ansatz Block: f2py_xp3_lg_2005_ansatz Block: f2py_compute_gamma_skw Block: f2py_sponge_damp_xm Block: f2py_sponge_damp_xp2 Block: f2py_sponge_damp_xp3 Block: f2py_calculate_spurious_source Block: f2py_remap_vals_to_target_same_grid Block: f2py_sfc_varnce_check Block: f2py_parameterization_check Block: f2py_calc_wp4_pdf Block: f2py_calc_wp2xp_pdf Block: f2py_calc_wpxp2_pdf Block: f2py_calc_wpxpyp_pdf Block: f2py_calc_w_up_in_cloud Block: f2py_pdf_closure_check Block: f2py_length_check Block: f2py_assert_corr_symmetric Block: f2py_xpyp_term_ta_pdf_lhs Block: f2py_xpyp_term_ta_pdf_lhs_godunov Block: f2py_xpyp_term_ta_pdf_rhs Block: f2py_xpyp_term_ta_pdf_rhs_godunov Block: f2py_calc_sfc_varnce Block: f2py_stats_accumulate Block: f2py_pdf_closure_driver Block: f2py_calc_turb_adv_range Block: f2py_monotonic_turbulent_flux_limit Block: f2py_precip_fraction Block: f2py_calc_params_ly93 Block: f2py_ly93_driver Block: f2py_calc_setter_var_params Block: f2py_calc_responder_params Block: f2py_calc_limits_f_x_responder Block: f2py_calc_l_x_skx_fnc Block: f2py_calc_setter_parameters_tsdadg Block: f2py_calc_coef_wp4_implicit Block: f2py_calc_coef_wpxp2_implicit Block: f2py_calc_coefs_wp2xp_semiimpl Block: f2py_calc_coefs_wpxpyp_semiimpl Block: f2py_calc_luhar_params Block: f2py_close_luhar_pdf Block: f2py_adg1_w_closure Block: f2py_tsdadg_pdf_driver Block: f2py_adg2_pdf_driver Block: f2py_adg1_pdf_driver Block: f2py_luhar_3d_pdf_driver Block: f2py_calculate_w_params Block: f2py_calculate_responder_params Block: f2py_calculate_coef_wp4_implicit Block: f2py_calc_coef_wp2xp_implicit Block: f2py_calc_coefs_wpxp2_semiimpl Block: f2py_new_pdf_driver Block: f2py_new_hybrid_pdf_driver Block: f2py_compute_sigma_sqd_w Block: f2py_fill_holes_vertical Block: f2py_fill_holes_wp2_from_horz_tke Block: f2py_clip_rcm Block: f2py_clip_covar Block: f2py_clip_variance Block: f2py_pos_definite_adj Block: f2py_clip_skewness Block: f2py_clip_covars_denom Block: f2py_calc_brunt_vaisala_freq_sqd Block: f2py_compute_cx_fnc_richardson Block: f2py_calc_stability_correction Block: f2py_diagnose_lscale_from_tau Block: f2py_calc_lscale_directly Block: f2py_advance_xp3 Block: f2py_diagnose_xp3 Block: f2py_advance_wp2_wp3 Block: f2py_advance_windm_edsclrm Block: f2py_advance_xp2_xpyp Block: f2py_update_xp2_mc Block: f2py_advance_xm_wpxp Post-processing (stage 2)... Building modules... Building module "clubb_f2py"... Constructing wrapper function "set_grid"... set_grid(zm,zt,dzm,dzt,invrs_dzm,invrs_dzt,weights_zt2zm,weights_zm2zt,k_lb_zm,k_ub_zm,k_lb_zt,k_ub_zt,grid_dir_indx,grid_dir,[nzm,nzt,ngrdcol]) Constructing wrapper function "get_grid"... zm,zt,dzm,dzt,invrs_dzm,invrs_dzt,weights_zt2zm,weights_zm2zt,k_lb_zm,k_ub_zm,k_lb_zt,k_ub_zt,grid_dir_indx,grid_dir = get_grid(ngrdcol,nzm,nzt) Constructing wrapper function "set_sclr_idx"... set_sclr_idx(iisclr_rt,iisclr_thl,iisclr_co2,iiedsclr_rt,iiedsclr_thl,iiedsclr_co2) Constructing wrapper function "get_sclr_idx"... iisclr_rt,iisclr_thl,iisclr_co2,iiedsclr_rt,iiedsclr_thl,iiedsclr_co2 = get_sclr_idx() Constructing wrapper function "set_nu_vert_res_dep"... set_nu_vert_res_dep(nu1,nu2,nu6,nu8,nu9,nu10,nu_hm,[nzm]) Constructing wrapper function "get_nu_vert_res_dep"... nu1,nu2,nu6,nu8,nu9,nu10,nu_hm = get_nu_vert_res_dep(nzm) Constructing wrapper function "get_err_info_dims"... ngrdcol = get_err_info_dims() Constructing wrapper function "get_err_code"... err_code = get_err_code(ngrdcol) Constructing wrapper function "f2py_init_pressure"... p_in_Pa,exner,p_in_Pa_zm,exner_zm = f2py_init_pressure(nzm,thvm,p_sfc,[ngrdcol,nzt]) Constructing wrapper function "f2py_get_grid_dims"... nzm_out,nzt_out = f2py_get_grid_dims() Constructing wrapper function "f2py_get_grid_shape"... ngrdcol_out,nzm_out,nzt_out = f2py_get_grid_shape() Constructing wrapper function "f2py_band_solve_multiple_rhs"... lhs,rhs,soln,rcond = f2py_band_solve_multiple_rhs(solve_name,penta_solve_method,nsup,nsub,lhs,rhs,old_soln,use_rcond,[ngrdcol,ndim,nrhs]) Constructing wrapper function "f2py_tridiag_solve_single_rhs_multiple_lhs"... lhs,rhs,soln,rcond = f2py_tridiag_solve_single_rhs_multiple_lhs(solve_name,tridiag_solve_method,lhs,rhs,use_rcond,[ngrdcol,ndim]) Constructing wrapper function "f2py_tridiag_solve_multiple_rhs"... lhs,rhs,soln,rcond = f2py_tridiag_solve_multiple_rhs(solve_name,tridiag_solve_method,lhs,rhs,use_rcond,[ngrdcol,ndim,nrhs]) Constructing wrapper function "f2py_lapack_gtsv"... soln,info = f2py_lapack_gtsv(dl,d,du,b,[n,nrhs]) Constructing wrapper function "f2py_lapack_gtsvx"... soln,rcond,ferr,berr,info = f2py_lapack_gtsvx(dl,d,du,b,[n,nrhs]) Constructing wrapper function "f2py_lapack_gbsv"... soln,ipiv,info = f2py_lapack_gbsv(kl,ku,ab,b,[n,nrhs]) Constructing wrapper function "f2py_lapack_gbsvx"... soln,rcond,ferr,berr,equed,info = f2py_lapack_gbsvx(kl,ku,ab,b,[n,nrhs]) Constructing wrapper function "f2py_lapack_potrf"... a_factor,info = f2py_lapack_potrf(uplo,a,[n]) Constructing wrapper function "f2py_lapack_poequ"... s,scond,amax,info = f2py_lapack_poequ(a,[n]) Constructing wrapper function "f2py_lapack_laqsy"... a_equed,equed = f2py_lapack_laqsy(uplo,a,s,scond,amax,[n]) Constructing wrapper function "f2py_lapack_syev"... a_out,w,info = f2py_lapack_syev(jobz,uplo,a,[n]) Constructing wrapper function "f2py_lapack_tridiag_solve"... soln = f2py_lapack_tridiag_solve(solve_type,lhs,rhs,[ndim,nrhs,ngrdcol]) Constructing wrapper function "f2py_lapack_tridiag_solvex"... soln,rcond = f2py_lapack_tridiag_solvex(solve_type,lhs,rhs,[ndim,nrhs,ngrdcol]) Constructing wrapper function "f2py_lapack_band_solve"... soln = f2py_lapack_band_solve(solve_type,nsup,nsub,lhs,rhs,[ndim,nrhs,ngrdcol]) Constructing wrapper function "f2py_lapack_band_solvex"... soln,rcond = f2py_lapack_band_solvex(solve_type,nsup,nsub,lhs,rhs,[ndim,nrhs,ngrdcol]) Constructing wrapper function "f2py_penta_bicgstab_solve"... soln,iters = f2py_penta_bicgstab_solve(lhs,rhs,[ndim,ngrdcol]) Constructing wrapper function "f2py_penta_lu_solve_single_rhs_multiple_lhs"... soln = f2py_penta_lu_solve_single_rhs_multiple_lhs(lhs,rhs,[ndim,ngrdcol]) Constructing wrapper function "f2py_penta_lu_solve_multiple_rhs_lhs"... soln = f2py_penta_lu_solve_multiple_rhs_lhs(lhs,rhs,[ndim,nrhs,ngrdcol]) Constructing wrapper function "f2py_tridiag_lu_solve_single_rhs_lhs"... soln = f2py_tridiag_lu_solve_single_rhs_lhs(lhs,rhs,[ndim]) Constructing wrapper function "f2py_tridiag_lu_solve_single_rhs_multiple_lhs"... soln = f2py_tridiag_lu_solve_single_rhs_multiple_lhs(lhs,rhs,[ndim,ngrdcol]) Constructing wrapper function "f2py_tridiag_lu_solve_multiple_rhs_lhs"... soln = f2py_tridiag_lu_solve_multiple_rhs_lhs(lhs,rhs,[ndim,nrhs,ngrdcol]) Constructing wrapper function "f2py_thlm2t_in_k_1d"... t_in_k = f2py_thlm2t_in_k_1d(thlm,exner,rcm,[nz]) Constructing wrapper function "f2py_init_err_info"... f2py_init_err_info(ngrdcol) Constructing wrapper function "f2py_set_default_config_flags"... iiPDF_type,ipdf_call_placement,penta_solve_method,tridiag_solve_method,saturation_formula,grid_remap_method,grid_adapt_in_time_method,fill_holes_type,l_use_precip_frac,l_predict_upwp_vpwp,l_ho_nontrad_coriolis,l_ho_trad_coriolis,l_min_wp2_from_corr_wx,l_min_xp2_from_corr_wx,l_C2_cloud_frac,l_diffuse_rtm_and_thlm,l_stability_correct_Kh_N2_zm,l_calc_thlp2_rad,l_upwind_xpyp_ta,l_upwind_xm_ma,l_uv_nudge,l_rtm_nudge,l_tke_aniso,l_vert_avg_closure,l_trapezoidal_rule_zt,l_trapezoidal_rule_zm,l_call_pdf_closure_twice,l_standard_term_ta,l_partial_upwind_wp3,l_godunov_upwind_wpxp_ta,l_godunov_upwind_xpyp_ta,l_use_cloud_cover,l_diagnose_correlations,l_calc_w_corr,l_const_Nc_in_cloud,l_fix_w_chi_eta_correlations,l_stability_correct_tau_zm,l_damp_wp2_using_em,l_do_expldiff_rtm_thlm,l_Lscale_plume_centered,l_diag_Lscale_from_tau,l_use_C7_Richardson,l_use_C11_Richardson,l_use_shear_Richardson,l_brunt_vaisala_freq_moist,l_use_thvm_in_bv_freq,l_rcm_supersat_adj,l_damp_wp3_Skw_squared,l_prescribed_avg_deltaz,l_lmm_stepping,l_e3sm_config,l_vary_convect_depth,l_use_tke_in_wp3_pr_turb_term,l_use_tke_in_wp2_wp3_K_dfsn,l_use_wp3_lim_with_smth_Heaviside,l_smooth_Heaviside_tau_wpxp,l_modify_limiters_for_cnvg_test,l_enable_relaxed_clipping,l_linearize_pbl_winds,l_mono_flux_lim_thlm,l_mono_flux_lim_rtm,l_mono_flux_lim_um,l_mono_flux_lim_vm,l_mono_flux_lim_spikefix,l_host_applies_sfc_fluxes,l_wp2_fill_holes_tke,l_add_dycore_grid = f2py_set_default_config_flags() Constructing wrapper function "f2py_init_config_flags"... f2py_init_config_flags(iiPDF_type,ipdf_call_placement,penta_solve_method,tridiag_solve_method,saturation_formula,grid_remap_method,grid_adapt_in_time_method,fill_holes_type,l_use_precip_frac,l_predict_upwp_vpwp,l_ho_nontrad_coriolis,l_ho_trad_coriolis,l_min_wp2_from_corr_wx,l_min_xp2_from_corr_wx,l_C2_cloud_frac,l_diffuse_rtm_and_thlm,l_stability_correct_Kh_N2_zm,l_calc_thlp2_rad,l_upwind_xpyp_ta,l_upwind_xm_ma,l_uv_nudge,l_rtm_nudge,l_tke_aniso,l_vert_avg_closure,l_trapezoidal_rule_zt,l_trapezoidal_rule_zm,l_call_pdf_closure_twice,l_standard_term_ta,l_partial_upwind_wp3,l_godunov_upwind_wpxp_ta,l_godunov_upwind_xpyp_ta,l_use_cloud_cover,l_diagnose_correlations,l_calc_w_corr,l_const_Nc_in_cloud,l_fix_w_chi_eta_correlations,l_stability_correct_tau_zm,l_damp_wp2_using_em,l_do_expldiff_rtm_thlm,l_Lscale_plume_centered,l_diag_Lscale_from_tau,l_use_C7_Richardson,l_use_C11_Richardson,l_use_shear_Richardson,l_brunt_vaisala_freq_moist,l_use_thvm_in_bv_freq,l_rcm_supersat_adj,l_damp_wp3_Skw_squared,l_prescribed_avg_deltaz,l_lmm_stepping,l_e3sm_config,l_vary_convect_depth,l_use_tke_in_wp3_pr_turb_term,l_use_tke_in_wp2_wp3_K_dfsn,l_use_wp3_lim_with_smth_Heaviside,l_smooth_Heaviside_tau_wpxp,l_modify_limiters_for_cnvg_test,l_enable_relaxed_clipping,l_linearize_pbl_winds,l_mono_flux_lim_thlm,l_mono_flux_lim_rtm,l_mono_flux_lim_um,l_mono_flux_lim_vm,l_mono_flux_lim_spikefix,l_host_applies_sfc_fluxes,l_wp2_fill_holes_tke,l_add_dycore_grid) Constructing wrapper function "f2py_setup_grid"... f2py_setup_grid(sfc_elevation,l_implemented,l_ascending_grid,grid_type,deltaz,zm_init,zm_top,momentum_heights,thermodynamic_heights,[nzmax,ngrdcol]) Constructing wrapper function "f2py_get_nparams"... nparams_out = f2py_get_nparams() Constructing wrapper function "f2py_init_clubb_params"... clubb_params = f2py_init_clubb_params(ngrdcol,iunit,filename,nparams) Constructing wrapper function "f2py_get_param_names"... param_names = f2py_get_param_names(nparams) Constructing wrapper function "f2py_init_clubb_params_file"... clubb_params = f2py_init_clubb_params_file(ngrdcol,filename,nparams,[flen_bn]) Constructing wrapper function "f2py_calc_derrived_params"... getarrdims:warning: assumed shape array, using 0 instead of '*' lmin,mixt_frac_max_mag = f2py_calc_derrived_params(grid_type,deltaz,clubb_params,l_prescribed_avg_deltaz,[ngrdcol]) Constructing wrapper function "f2py_init_clubb_loss"... num_variables,total_param_sets,num_time_windows,clubb_var_names = f2py_init_clubb_loss(runfile) Constructing wrapper function "f2py_get_clubb_params_all"... clubb_params = f2py_get_clubb_params_all(total_param_sets,nparams) Constructing wrapper function "f2py_clubb_get_loss_for_params"... scaled_rmse,correlation,std_ratio,centered_rmse_norm,bias_norm = f2py_clubb_get_loss_for_params(num_variables,num_time_windows,clubb_params_all,[total_param_sets,nparams]) Constructing wrapper function "f2py_finalize_clubb_loss"... f2py_finalize_clubb_loss() Constructing wrapper function "f2py_init_pdf_params"... f2py_init_pdf_params(nz,ngrdcol) Constructing wrapper function "f2py_init_pdf_params_zm"... f2py_init_pdf_params_zm(nz,ngrdcol) Constructing wrapper function "f2py_init_pdf_implicit"... f2py_init_pdf_implicit(nz,ngrdcol,sclr_dim) Constructing wrapper function "f2py_cubic_solve"... roots_real,roots_imag = f2py_cubic_solve(a_coef,b_coef,c_coef,d_coef,[nz]) Constructing wrapper function "f2py_quadratic_solve"... roots_real,roots_imag = f2py_quadratic_solve(a_coef,b_coef,c_coef,[nz]) Constructing wrapper function "get_pdf_params_dims"... ngrdcol,nz,ngrdcol_zm,nz_zm = get_pdf_params_dims() Constructing wrapper function "get_pdf_params_fields"... w_1,w_2,varnce_w_1,varnce_w_2,rt_1,rt_2,varnce_rt_1,varnce_rt_2,thl_1,thl_2,varnce_thl_1,varnce_thl_2,corr_w_rt_1,corr_w_rt_2,corr_w_thl_1,corr_w_thl_2,corr_rt_thl_1,corr_rt_thl_2,alpha_thl,alpha_rt,crt_1,crt_2,cthl_1,cthl_2,chi_1,chi_2,stdev_chi_1,stdev_chi_2,stdev_eta_1,stdev_eta_2,covar_chi_eta_1,covar_chi_eta_2,corr_w_chi_1,corr_w_chi_2,corr_w_eta_1,corr_w_eta_2,corr_chi_eta_1,corr_chi_eta_2,rsatl_1,rsatl_2,rc_1,rc_2,cloud_frac_1,cloud_frac_2,mixt_frac,ice_supersat_frac_1,ice_supersat_frac_2 = get_pdf_params_fields(ngrdcol,nz,which) Constructing wrapper function "set_pdf_params_fields"... set_pdf_params_fields(which,w_1,w_2,varnce_w_1,varnce_w_2,rt_1,rt_2,varnce_rt_1,varnce_rt_2,thl_1,thl_2,varnce_thl_1,varnce_thl_2,corr_w_rt_1,corr_w_rt_2,corr_w_thl_1,corr_w_thl_2,corr_rt_thl_1,corr_rt_thl_2,alpha_thl,alpha_rt,crt_1,crt_2,cthl_1,cthl_2,chi_1,chi_2,stdev_chi_1,stdev_chi_2,stdev_eta_1,stdev_eta_2,covar_chi_eta_1,covar_chi_eta_2,corr_w_chi_1,corr_w_chi_2,corr_w_eta_1,corr_w_eta_2,corr_chi_eta_1,corr_chi_eta_2,rsatl_1,rsatl_2,rc_1,rc_2,cloud_frac_1,cloud_frac_2,mixt_frac,ice_supersat_frac_1,ice_supersat_frac_2,[ngrdcol,nz]) Constructing wrapper function "get_implicit_coefs_dims"... ngrdcol,nz,sclr_dim = get_implicit_coefs_dims() Constructing wrapper function "get_implicit_coefs_fields"... coef_wp4_implicit,coef_wp2rtp_implicit,term_wp2rtp_explicit,coef_wp2thlp_implicit,term_wp2thlp_explicit,coef_wp2up_implicit,term_wp2up_explicit,coef_wp2vp_implicit,term_wp2vp_explicit,coef_wprtp2_implicit,term_wprtp2_explicit,coef_wpthlp2_implicit,term_wpthlp2_explicit,coef_wprtpthlp_implicit,term_wprtpthlp_explicit,coef_wpup2_implicit,term_wpup2_explicit,coef_wpvp2_implicit,term_wpvp2_explicit,coef_wp2sclrp_implicit,term_wp2sclrp_explicit,coef_wpsclrp2_implicit,term_wpsclrp2_explicit,coef_wprtpsclrp_implicit,term_wprtpsclrp_explicit,coef_wpthlpsclrp_implicit,term_wpthlpsclrp_explicit = get_implicit_coefs_fields(ngrdcol,nz,sclr_dim,[sclr_dim_transport]) Constructing wrapper function "get_implicit_coefs_fields_2d"... coef_wp4_implicit,coef_wp2rtp_implicit,term_wp2rtp_explicit,coef_wp2thlp_implicit,term_wp2thlp_explicit,coef_wp2up_implicit,term_wp2up_explicit,coef_wp2vp_implicit,term_wp2vp_explicit,coef_wprtp2_implicit,term_wprtp2_explicit,coef_wpthlp2_implicit,term_wpthlp2_explicit,coef_wprtpthlp_implicit,term_wprtpthlp_explicit,coef_wpup2_implicit,term_wpup2_explicit,coef_wpvp2_implicit,term_wpvp2_explicit = get_implicit_coefs_fields_2d(ngrdcol,nz) Constructing wrapper function "set_implicit_coefs_fields"... set_implicit_coefs_fields(sclr_dim,coef_wp4_implicit,coef_wp2rtp_implicit,term_wp2rtp_explicit,coef_wp2thlp_implicit,term_wp2thlp_explicit,coef_wp2up_implicit,term_wp2up_explicit,coef_wp2vp_implicit,term_wp2vp_explicit,coef_wprtp2_implicit,term_wprtp2_explicit,coef_wpthlp2_implicit,term_wpthlp2_explicit,coef_wprtpthlp_implicit,term_wprtpthlp_explicit,coef_wpup2_implicit,term_wpup2_explicit,coef_wpvp2_implicit,term_wpvp2_explicit,coef_wp2sclrp_implicit,term_wp2sclrp_explicit,coef_wpsclrp2_implicit,term_wpsclrp2_explicit,coef_wprtpsclrp_implicit,term_wprtpsclrp_explicit,coef_wpthlpsclrp_implicit,term_wpthlpsclrp_explicit,[ngrdcol,nz,sclr_dim_transport]) Constructing wrapper function "set_implicit_coefs_fields_2d"... set_implicit_coefs_fields_2d(coef_wp4_implicit,coef_wp2rtp_implicit,term_wp2rtp_explicit,coef_wp2thlp_implicit,term_wp2thlp_explicit,coef_wp2up_implicit,term_wp2up_explicit,coef_wp2vp_implicit,term_wp2vp_explicit,coef_wprtp2_implicit,term_wprtp2_explicit,coef_wpthlp2_implicit,term_wpthlp2_explicit,coef_wprtpthlp_implicit,term_wprtpthlp_explicit,coef_wpup2_implicit,term_wpup2_explicit,coef_wpvp2_implicit,term_wpvp2_explicit,[ngrdcol,nz]) Constructing wrapper function "f2py_stats_init"... f2py_stats_init(registry_path,output_path,ncol,stats_tsamp,stats_tout,dt_main,day_in,month_in,year_in,time_initial,stats_tstart,stats_tend,zt,zm,sclr_dim,edsclr_dim,[nzt,nzm]) Constructing wrapper function "f2py_stats_init_with_params"... getarrdims:warning: assumed shape array, using 0 instead of '*' getarrdims:warning: assumed shape array, using 0 instead of '*' f2py_stats_init_with_params(registry_path,output_path,stats_tsamp,stats_tout,dt_main,day_in,month_in,year_in,time_initial,stats_tstart,stats_tend,zt,zm,sclr_dim,edsclr_dim,clubb_params,param_names,[ncol,nzt,nzm]) Constructing wrapper function "f2py_stats_finalize"... f2py_stats_finalize() Constructing wrapper function "f2py_get_stats_config"... l_enabled,ncol,nvars,stats_nsamp,stats_nout,samples_per_write,time_index,l_sample,l_last_sample = f2py_get_stats_config() Constructing wrapper function "f2py_get_stats_var_meta"... name,grid_name,units,long_name,grid_id,nz = f2py_get_stats_var_meta(ivar) Constructing wrapper function "f2py_get_stats_var_data"... buffer,nsamples = f2py_get_stats_var_data(ivar,ncol,nz) Constructing wrapper function "f2py_set_stats_var_data"... f2py_set_stats_var_data(ivar,buffer,nsamples,[ncol,nz]) Constructing wrapper function "f2py_stats_begin_timestep"... f2py_stats_begin_timestep(itime) Constructing wrapper function "f2py_stats_end_timestep"... f2py_stats_end_timestep(time_value) Constructing wrapper function "f2py_stats_update_scalar"... f2py_stats_update_scalar(name,values,icol,level) Constructing wrapper function "f2py_stats_update_1d"... f2py_stats_update_1d(name,values,icol,[n]) Constructing wrapper function "f2py_stats_update_2d"... f2py_stats_update_2d(name,values,[ncol,nz]) Constructing wrapper function "f2py_stats_begin_budget_scalar"... f2py_stats_begin_budget_scalar(name,values,icol) Constructing wrapper function "f2py_stats_begin_budget_1d"... f2py_stats_begin_budget_1d(name,values,icol,[n]) Constructing wrapper function "f2py_stats_begin_budget_2d"... f2py_stats_begin_budget_2d(name,values,[ncol,nz]) Constructing wrapper function "f2py_stats_update_budget_scalar"... f2py_stats_update_budget_scalar(name,values,icol,level) Constructing wrapper function "f2py_stats_update_budget_1d"... f2py_stats_update_budget_1d(name,values,icol,[n]) Constructing wrapper function "f2py_stats_update_budget_2d"... f2py_stats_update_budget_2d(name,values,[ncol,nz]) Constructing wrapper function "f2py_stats_finalize_budget_scalar"... f2py_stats_finalize_budget_scalar(name,values,icol,l_count_sample) Constructing wrapper function "f2py_stats_finalize_budget_1d"... f2py_stats_finalize_budget_1d(name,values,icol,l_count,[n]) Constructing wrapper function "f2py_stats_finalize_budget_2d"... f2py_stats_finalize_budget_2d(name,values,l_count,[ncol,nz]) Constructing wrapper function "f2py_var_on_stats_list"... l_result = f2py_var_on_stats_list(name) Constructing wrapper function "f2py_stats_update_grid"... f2py_stats_update_grid(zt_src,zm_src,rho_vals,rho_levels,p_sfc,[ncol,nzt,nzm,nrho]) Constructing wrapper function "f2py_stats_lh_samples_init"... f2py_stats_lh_samples_init(num_samples,nl_names,u_names,zt_vals,[nzt,n_nl,n_u]) Constructing wrapper function "f2py_stats_lh_samples_write_ln"... f2py_stats_lh_samples_write_ln(samples,[ncol,nsamp,nzt,nvars]) Constructing wrapper function "f2py_stats_lh_samples_write_u"... f2py_stats_lh_samples_write_u(uniform_vals,mixture_comp,sample_weights,[ncol,nsamp,nzt,nvars]) Constructing wrapper function "f2py_prescribe_forcings"... rtm,wm_zm,wm_zt,ug,vg,um_ref,vm_ref,thlm_forcing,rtm_forcing,um_forcing,vm_forcing,wprtp_forcing,wpthlp_forcing,rtp2_forcing,thlp2_forcing,rtpthlp_forcing,wpsclrp,sclrm_forcing,edsclrm_forcing,wpthlp_sfc,wprtp_sfc,upwp_sfc,vpwp_sfc,t_sfc,p_sfc,sens_ht,latent_ht,wpsclrp_sfc,wpedsclrp_sfc = f2py_prescribe_forcings(sclr_dim,edsclr_dim,runtype,sfctype,time_current,time_initial,dt,um,vm,thlm,p_in_pa,exner,rho,rho_zm,thvm,zt_in,l_t_dependent,l_ignore_forcings,l_input_xpwp_sfc,l_modify_bc_for_cnvg_test,saturation_formula,l_add_dycore_grid,grid_remap_method,grid_adapt_in_time_method,rtm,wm_zm,wm_zt,ug,vg,um_ref,vm_ref,thlm_forcing,rtm_forcing,um_forcing,vm_forcing,wprtp_forcing,wpthlp_forcing,rtp2_forcing,thlp2_forcing,rtpthlp_forcing,wpsclrp,sclrm_forcing,edsclrm_forcing,wpthlp_sfc,wprtp_sfc,upwp_sfc,vpwp_sfc,t_sfc,p_sfc,sens_ht,latent_ht,wpsclrp_sfc,wpedsclrp_sfc,[nzm,nzt,ngrdcol,sclr_dim_transport,edsclr_dim_transport]) Constructing wrapper function "f2py_advance_clubb_core"... getarrdims:warning: assumed shape array, using 0 instead of '*' um,vm,up3,vp3,thlm,rtm,rtp3,thlp3,wp3,upwp,vpwp,up2,vp2,wprtp,wpthlp,rtp2,thlp2,rtpthlp,wp2,sclrm,sclrp3,wpsclrp,sclrp2,sclrprtp,sclrpthlp,p_in_pa,exner,rcm,cloud_frac,wp2thvp,wp2up,wpthvp,rtpthvp,thlpthvp,sclrpthvp,wp2rtp,wp2thlp,wpup2,wpvp2,ice_supersat_frac,uprcp,vprcp,rc_coef_zm,wp4,wp2up2,wp2vp2,um_pert,vm_pert,upwp_pert,vpwp_pert,edsclrm,rcm_in_layer,cloud_cover,w_up_in_cloud,w_down_in_cloud,cloudy_updraft_frac,cloudy_downdraft_frac,wprcp,invrs_tau_zm,kh_zt,kh_zm,thlprcp,lscale = f2py_advance_clubb_core(l_implemented,dt,fcor,fcor_y,sfc_elevation,hydromet_dim,edsclr_dim,sclr_tol,thlm_forcing,rtm_forcing,um_forcing,vm_forcing,sclrm_forcing,edsclrm_forcing,wprtp_forcing,wpthlp_forcing,rtp2_forcing,thlp2_forcing,rtpthlp_forcing,wm_zm,wm_zt,wpthlp_sfc,wprtp_sfc,upwp_sfc,vpwp_sfc,p_sfc,wpsclrp_sfc,wpedsclrp_sfc,upwp_sfc_pert,vpwp_sfc_pert,rtm_ref,thlm_ref,um_ref,vm_ref,ug,vg,rho_zm,rho,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,thv_ds_zm,thv_ds_zt,l_mix_rat_hm,rfrzm,wphydrometp,wp2hmp,rtphmp_zt,thlphmp_zt,host_dx,host_dy,clubb_params,lmin,mixt_frac_max_mag,t0_val,ts_nudge,rtm_min,rtm_nudge_max_altitude,um,vm,up3,vp3,thlm,rtm,rtp3,thlp3,wp3,upwp,vpwp,up2,vp2,wprtp,wpthlp,rtp2,thlp2,rtpthlp,wp2,sclrm,sclrp3,wpsclrp,sclrp2,sclrprtp,sclrpthlp,p_in_pa,exner,rcm,cloud_frac,wp2thvp,wp2up,wpthvp,rtpthvp,thlpthvp,sclrpthvp,wp2rtp,wp2thlp,wpup2,wpvp2,ice_supersat_frac,uprcp,vprcp,rc_coef_zm,wp4,wp2up2,wp2vp2,um_pert,vm_pert,upwp_pert,vpwp_pert,edsclrm,[nzm,nzt,ngrdcol,sclr_dim,hydromet_dim_transport,sclr_dim_transport,edsclr_dim_transport]) Constructing wrapper function "f2py_calculate_thvm"... thvm = f2py_calculate_thvm(thlm,rtm,rcm,exner,thv_ds_zt,[nzt,ngrdcol]) Constructing wrapper function "f2py_hydrostatic"... p_in_Pa,p_in_Pa_zm,exner,exner_zm,rho,rho_zm = f2py_hydrostatic(nzm,thvm,p_sfc,[ngrdcol,nzt]) Constructing wrapper function "f2py_zt2zm_2d"... azm = f2py_zt2zm_2d(nzm,azt,[nzt,ngrdcol]) Constructing wrapper function "f2py_zm2zt_2d"... azt = f2py_zm2zt_2d(nzt,azm,[nzm,ngrdcol]) Constructing wrapper function "f2py_zt2zm2zt_2d"... azt_smoothed = f2py_zt2zm2zt_2d(nzm,azt,zt_min,[nzt,ngrdcol]) Constructing wrapper function "f2py_ddzm_2d"... d_azm_dzt = f2py_ddzm_2d(nzt,azm,[nzm,ngrdcol]) Constructing wrapper function "f2py_ddzt_2d"... d_azt_dzm = f2py_ddzt_2d(nzm,azt,[nzt,ngrdcol]) Constructing wrapper function "f2py_sat_mixrat_liq_2d"... rsat = f2py_sat_mixrat_liq_2d(p_in_Pa,t_in_k,saturation_formula,[nz,ngrdcol]) Constructing wrapper function "f2py_sat_mixrat_ice_2d"... rsat = f2py_sat_mixrat_ice_2d(p_in_Pa,t_in_k,saturation_formula,[nz,ngrdcol]) Constructing wrapper function "f2py_rcm_sat_adj"... rcm_out = f2py_rcm_sat_adj(thlm,rtm,p_in_Pa,exner,saturation_formula) Constructing wrapper function "f2py_calculate_thlp2_rad"... getarrdims:warning: assumed shape array, using 0 instead of '*' thlp2_forcing = f2py_calculate_thlp2_rad(rcm,thlprcp,radht,clubb_params,thlp2_forcing,[ngrdcol,nzm,nzt]) Constructing wrapper function "f2py_cos_solar_zen"... cos_zen = f2py_cos_solar_zen(day,month,year,current_time,lat_vals,lon_vals) Constructing wrapper function "f2py_set_simplified_radiation_params"... f2py_set_simplified_radiation_params(f0_in,f1_in,kappa_in,eff_drop_radius_in,alvdr_in,gc_in,omega_in,l_rad_above_cloud_in,l_sw_radiation_in,l_fix_cos_solar_zen_in,nparam_in,fs_values_in,cos_solar_zen_values_in,cos_solar_zen_times_in) Constructing wrapper function "f2py_sunray_sw"... frad_sw = f2py_sunray_sw(fs0,amu0,rho,rcm,[ngrdcol,nzt]) Constructing wrapper function "f2py_zero_pdf_params"... f2py_zero_pdf_params(which) Constructing wrapper function "f2py_zero_pdf_implicit_coefs_terms"... f2py_zero_pdf_implicit_coefs_terms() Constructing wrapper function "f2py_check_clubb_settings"... getarrdims:warning: assumed shape array, using 0 instead of '*' f2py_check_clubb_settings(params,l_implemented,l_input_fields,[ngrdcol]) Constructing wrapper function "f2py_check_parameters"... getarrdims:warning: assumed shape array, using 0 instead of '*' f2py_check_parameters(clubb_params,lmin,[ngrdcol]) Constructing wrapper function "f2py_set_clubb_debug_level"... f2py_set_clubb_debug_level(level) Constructing wrapper function "f2py_cleanup_grid"... f2py_cleanup_grid() Constructing wrapper function "f2py_setup_grid_heights"... f2py_setup_grid_heights(l_implemented,l_ascending_grid,grid_type,deltaz,zm_init,momentum_heights,thermodynamic_heights,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_read_grid_heights"... momentum_heights,thermodynamic_heights = f2py_read_grid_heights(nzmax,grid_type,zm_grid_fname,zt_grid_fname,file_unit) Constructing wrapper function "f2py_cleanup_err_info"... f2py_cleanup_err_info() Constructing wrapper function "f2py_set_err_info_values"... f2py_set_err_info_values(chunk_idx,mpi_rank,lat,lon,[ngrdcol]) Constructing wrapper function "f2py_get_err_info_values"... chunk_idx,mpi_rank,lat,lon = f2py_get_err_info_values(ngrdcol) Constructing wrapper function "f2py_reset_err_code"... f2py_reset_err_code() Constructing wrapper function "f2py_initialize_error_headers"... f2py_initialize_error_headers() Constructing wrapper function "f2py_file_read_1d"... variable = f2py_file_read_1d(file_unit,path_and_filename,num_datapts,entries_per_line) Constructing wrapper function "f2py_julian2gregorian_date"... day,month,year = f2py_julian2gregorian_date(julian_date) Constructing wrapper function "f2py_gregorian2julian_day"... julian_day = f2py_gregorian2julian_day(day,month,year) Constructing wrapper function "f2py_leap_year"... is_leap_year = f2py_leap_year(year) Constructing wrapper function "f2py_lin_interpolate_two_points"... var_interp = f2py_lin_interpolate_two_points(height_int,height_high,height_low,var_high,var_low) Constructing wrapper function "f2py_mono_cubic_interp"... f_out = f2py_mono_cubic_interp(z_in,km1,k00,kp1,kp2,zm1,z00,zp1,zp2,fm1,f00,fp1,fp2) Constructing wrapper function "f2py_zlinterp_fnc"... var_out = f2py_zlinterp_fnc(grid_out,grid_src,var_src,[dim_out,dim_src]) Constructing wrapper function "f2py_calc_ri_zm"... ri_zm = f2py_calc_ri_zm(bv_freq_sqd,shear,lim_bv,lim_shear,[nzm,ngrdcol]) Constructing wrapper function "f2py_vertical_avg"... avg_out = f2py_vertical_avg(rho_ds,field,dz,[total_idx]) Constructing wrapper function "f2py_vertical_integral"... integral_out = f2py_vertical_integral(rho_ds,field,dz,[total_idx]) Constructing wrapper function "f2py_zm2zt2zm_2d"... azm_smoothed = f2py_zm2zt2zm_2d(nzt,azm,zm_min,[nzm,ngrdcol]) Constructing wrapper function "f2py_pvertinterp"... interp_var = f2py_pvertinterp(p_mid,p_out,input_var,[nzt,ngrdcol]) Constructing wrapper function "f2py_compute_current_date"... current_day,current_month,current_year,seconds_since_current_date = f2py_compute_current_date(previous_day,previous_month,previous_year,seconds_since_previous_date) Constructing wrapper function "f2py_set_lscale_max"... lscale_max = f2py_set_lscale_max(l_implemented,host_dx,host_dy,[ngrdcol]) Constructing wrapper function "f2py_term_ma_zt_lhs"... lhs_ma = f2py_term_ma_zt_lhs(wm_zt,weights_zt2zm,invrs_dzt,invrs_dzm,l_upwind_xm_ma,grid_dir,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_term_ma_zm_lhs"... lhs_ma = f2py_term_ma_zm_lhs(wm_zm,invrs_dzm,weights_zm2zt,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_diffusion_zt_lhs"... lhs = f2py_diffusion_zt_lhs(k_zm,k_zt,nu,invrs_rho_ds_zt,rho_ds_zm,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_diffusion_zm_lhs"... lhs = f2py_diffusion_zm_lhs(k_zt,k_zm,nu,invrs_rho_ds_zm,rho_ds_zt,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_smooth_heaviside_peskin"... smth_output = f2py_smooth_heaviside_peskin(input,smth_range,[nz,ngrdcol]) Constructing wrapper function "f2py_smooth_max_scalar_array"... output_var = f2py_smooth_max_scalar_array(input_var1,input_var2,smth_coef,[nz,ngrdcol]) Constructing wrapper function "f2py_smooth_max_array_scalar"... output_var = f2py_smooth_max_array_scalar(input_var1,input_var2,smth_coef,[nz,ngrdcol]) Constructing wrapper function "f2py_smooth_min_scalar_array"... output_var = f2py_smooth_min_scalar_array(input_var1,input_var2,smth_coef,[nz,ngrdcol]) Constructing wrapper function "f2py_smooth_min_array_scalar"... output_var = f2py_smooth_min_array_scalar(input_var1,input_var2,smth_coef,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_xpwp_2d"... xpwp = f2py_calc_xpwp_2d(km_zm,xm,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_calc_ddzt_umvm_sqd"... ddzt_umvm_sqd = f2py_calc_ddzt_umvm_sqd(nzm,um,vm,[nzt,ngrdcol]) Constructing wrapper function "f2py_calc_wp3_on_wp2"... wp3_on_wp2,wp3_on_wp2_zt = f2py_calc_wp3_on_wp2(wp2,wp3,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_lscale_width_vert_avg"... avg_out = f2py_lscale_width_vert_avg(smth_type,var_profile,lscale_zm,rho_ds_zm,var_below_ground_value,[nzm,ngrdcol]) Constructing wrapper function "f2py_wp23_term_splat_lhs"... lhs_splat_wp2,lhs_splat_wp3 = f2py_wp23_term_splat_lhs(nzt,c_wp2_splat,brunt_vaisala_freq_sqd_mixed,lscale_zm,rho_ds_zm,[nzm,ngrdcol]) Constructing wrapper function "f2py_smooth_corr_quotient"... quotient = f2py_smooth_corr_quotient(numerator,denominator,denom_thresh,[ngrdcol,nz]) Constructing wrapper function "f2py_calc_comp_corrs_binormal"... corr_x_y_1,corr_x_y_2 = f2py_calc_comp_corrs_binormal(xpyp,xm,ym,mu_x_1,mu_x_2,mu_y_1,mu_y_2,sigma_x_1_sqd,sigma_x_2_sqd,sigma_y_1_sqd,sigma_y_2_sqd,mixt_frac,[nz,ngrdcol]) Constructing wrapper function "f2py_mean_l2n"... mu_x_n = f2py_mean_l2n(mu_x,sigma2_on_mu2) Constructing wrapper function "f2py_stdev_l2n"... sigma_x_n = f2py_stdev_l2n(sigma2_on_mu2) Constructing wrapper function "f2py_corr_nn2nl"... corr_x_y = f2py_corr_nn2nl(corr_x_y_n,sigma_y_n,y_sigma2_on_mu2,[nz,ngrdcol]) Constructing wrapper function "f2py_corr_nn2ll"... corr_x_y = f2py_corr_nn2ll(corr_x_y_n,sigma_x_n,sigma_y_n,x_sigma2_on_mu2,y_sigma2_on_mu2,[nz,ngrdcol]) Constructing wrapper function "f2py_compute_mean_binormal"... xm = f2py_compute_mean_binormal(mu_x_1,mu_x_2,mixt_frac) Constructing wrapper function "f2py_compute_variance_binormal"... xp2 = f2py_compute_variance_binormal(xm,mu_x_1,mu_x_2,stdev_x_1,stdev_x_2,mixt_frac) Constructing wrapper function "f2py_calc_corr_chi_x"... corr_chi_x_i = f2py_calc_corr_chi_x(crt_i,cthl_i,sigma_rt_i,sigma_thl_i,sigma_chi_i,corr_rt_x_i,corr_thl_x_i) Constructing wrapper function "f2py_calc_corr_eta_x"... corr_eta_x_i = f2py_calc_corr_eta_x(crt_i,cthl_i,sigma_rt_i,sigma_thl_i,sigma_eta_i,corr_rt_x_i,corr_thl_x_i) Constructing wrapper function "f2py_nc_in_cloud_to_ncnm"... ncnm = f2py_nc_in_cloud_to_ncnm(mu_chi_1,mu_chi_2,sigma_chi_1,sigma_chi_2,mixt_frac,nc_in_cloud,cloud_frac_1,cloud_frac_2,const_ncnp2_on_ncnm2,const_corr_chi_ncn) Constructing wrapper function "f2py_cholesky_factor"... a_scaling,a_cholesky,l_scaled = f2py_cholesky_factor(a_input,[ndim]) Constructing wrapper function "f2py_mirror_lower_triangular_matrix"... matrix = f2py_mirror_lower_triangular_matrix(matrix,[nvars]) Constructing wrapper function "f2py_diagnose_correlations"... corr_array = f2py_diagnose_correlations(iipdf_w,corr_array_pre,l_calc_w_corr,[pdf_dim]) Constructing wrapper function "f2py_calc_cholesky_corr_mtx_approx"... corr_cholesky_mtx,corr_mtx_approx = f2py_calc_cholesky_corr_mtx_approx(iipdf_w,corr_matrix,[n_variables]) Constructing wrapper function "f2py_skx_func"... getarrdims:warning: assumed shape array, using 0 instead of '*' skx = f2py_skx_func(xp2,xp3,x_tol,clubb_params,[nz,ngrdcol]) Constructing wrapper function "f2py_lg_2005_ansatz"... skx = f2py_lg_2005_ansatz(skw,wpxp,wp2,xp2,beta,sigma_sqd_w,x_tol,[nz,ngrdcol]) Constructing wrapper function "f2py_xp3_lg_2005_ansatz"... getarrdims:warning: assumed shape array, using 0 instead of '*' xp3 = f2py_xp3_lg_2005_ansatz(skw_zt,wpxp_zt,wp2_zt,xp2_zt,sigma_sqd_w_zt,clubb_params,x_tol,[nzt,ngrdcol]) Constructing wrapper function "f2py_compute_gamma_skw"... getarrdims:warning: assumed shape array, using 0 instead of '*' gamma_skw_fnc,gamma_skw_fnc_zt = f2py_compute_gamma_skw(l_gamma_skw,skw_zm,clubb_params,skw_zt,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_sponge_damp_xm"... xm_p = f2py_sponge_damp_xm(dt,zt,zm,xm_ref,xm,tau_sponge_damp,sponge_layer_depth,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_sponge_damp_xp2"... xp2_damped = f2py_sponge_damp_xp2(dt,zm,xp2,x_tol_sqd,tau_sponge_damp,sponge_layer_depth,[nzm,ngrdcol]) Constructing wrapper function "f2py_sponge_damp_xp3"... xp3_damped = f2py_sponge_damp_xp3(dt,z,zm,xp3,tau_sponge_damp,sponge_layer_depth,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_calculate_spurious_source"... spurious_source = f2py_calculate_spurious_source(integral_after,integral_before,flux_top,flux_sfc,integral_forcing,dt) Constructing wrapper function "f2py_remap_vals_to_target_same_grid"... target_values = f2py_remap_vals_to_target_same_grid(nzm,nzt,source_values,target_values_idx,rho_lin_spline_vals,rho_lin_spline_levels,iv,p_sfc,grid_remap_method,l_zt_variable,[ngrdcol,source_values_idx,total_idx_rho_lin_spline]) Constructing wrapper function "f2py_sfc_varnce_check"... f2py_sfc_varnce_check(sclr_dim,wp2_sfc,up2_sfc,vp2_sfc,thlp2_sfc,rtp2_sfc,rtpthlp_sfc,sclrp2_sfc,sclrprtp_sfc,sclrpthlp_sfc,[sclr_dim_transport]) Constructing wrapper function "f2py_parameterization_check"... f2py_parameterization_check(sclr_dim,edsclr_dim,thlm_forcing,rtm_forcing,um_forcing,vm_forcing,wm_zm,wm_zt,p_in_pa,rho_zm,rho,exner,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,thv_ds_zm,thv_ds_zt,wpthlp_sfc,wprtp_sfc,upwp_sfc,vpwp_sfc,p_sfc,um,upwp,vm,vpwp,up2,vp2,rtm,wprtp,thlm,wpthlp,wp2,wp3,rtp2,thlp2,rtpthlp,prefix,wpsclrp_sfc,wpedsclrp_sfc,sclrm,wpsclrp,sclrp2,sclrprtp,sclrpthlp,sclrm_forcing,edsclrm,edsclrm_forcing,[nzm,nzt,ngrdcol,sclr_dim_transport,edsclr_dim_transport]) Constructing wrapper function "f2py_calc_wp4_pdf"... wp4 = f2py_calc_wp4_pdf(wm,w_1,w_2,varnce_w_1,varnce_w_2,mixt_frac,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_wp2xp_pdf"... wp2xp = f2py_calc_wp2xp_pdf(wm,xm,w_1,w_2,x_1,x_2,varnce_w_1,varnce_w_2,varnce_x_1,varnce_x_2,corr_w_x_1,corr_w_x_2,mixt_frac,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_wpxp2_pdf"... wpxp2 = f2py_calc_wpxp2_pdf(wm,xm,w_1,w_2,x_1,x_2,varnce_w_1,varnce_w_2,varnce_x_1,varnce_x_2,corr_w_x_1,corr_w_x_2,mixt_frac,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_wpxpyp_pdf"... wpxpyp = f2py_calc_wpxpyp_pdf(wm,xm,ym,w_1,w_2,x_1,x_2,y_1,y_2,varnce_w_1,varnce_w_2,varnce_x_1,varnce_x_2,varnce_y_1,varnce_y_2,corr_w_x_1,corr_w_x_2,corr_w_y_1,corr_w_y_2,corr_x_y_1,corr_x_y_2,mixt_frac,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_w_up_in_cloud"... w_up_in_cloud,w_down_in_cloud,cloudy_updraft_frac,cloudy_downdraft_frac = f2py_calc_w_up_in_cloud(mixt_frac,cloud_frac_1,cloud_frac_2,w_1,w_2,varnce_w_1,varnce_w_2,[nz,ngrdcol]) Constructing wrapper function "f2py_pdf_closure_check"... f2py_pdf_closure_check(sclr_dim,wp4,wprtp2,wp2rtp,wpthlp2,wp2thlp,cloud_frac,rcm,wpthvp,wp2thvp,wp2up,rtpthvp,thlpthvp,wprcp,wp2rcp,rtprcp,thlprcp,rcp2,wprtpthlp,crt_1,crt_2,cthl_1,cthl_2,sclrpthvp,sclrprcp,wpsclrp2,wpsclrprtp,wpsclrpthlp,wp2sclrp,[nz,sclr_dim_transport]) Constructing wrapper function "f2py_length_check"... f2py_length_check(lscale,lscale_up,lscale_down,[nzt]) Constructing wrapper function "f2py_assert_corr_symmetric"... f2py_assert_corr_symmetric(corr_array_n,[pdf_dim]) Constructing wrapper function "f2py_xpyp_term_ta_pdf_lhs"... lhs_ta = f2py_xpyp_term_ta_pdf_lhs(coef_wpxpyp_implicit,rho_ds_zt,rho_ds_zm,invrs_rho_ds_zm,l_upwind_xpyp_turbulent_adv,sgn_turbulent_vel,coef_wpxpyp_implicit_zm,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_xpyp_term_ta_pdf_lhs_godunov"... lhs_ta = f2py_xpyp_term_ta_pdf_lhs_godunov(coef_wpxpyp_implicit,invrs_rho_ds_zm,rho_ds_zm,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_xpyp_term_ta_pdf_rhs"... rhs_ta = f2py_xpyp_term_ta_pdf_rhs(term_wpxpyp_explicit,rho_ds_zt,rho_ds_zm,invrs_rho_ds_zm,l_upwind_xpyp_turbulent_adv,sgn_turbulent_vel,term_wpxpyp_explicit_zm,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_xpyp_term_ta_pdf_rhs_godunov"... rhs_ta = f2py_xpyp_term_ta_pdf_rhs_godunov(term_wpxpyp_explicit_zm,invrs_rho_ds_zm,sgn_turbulent_vel,rho_ds_zm,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_calc_sfc_varnce"... wp2,up2,vp2,thlp2,rtp2,rtpthlp,sclrp2,sclrprtp,sclrpthlp = f2py_calc_sfc_varnce(sclr_dim,dt,sfc_elevation,upwp_sfc,vpwp_sfc,wpthlp,wprtp_sfc,um,vm,lscale_up,wpsclrp_sfc,lhs_splat_wp2,tau_zm,l_vary_convect_depth,t0,up2_sfc_coef,a_const,wp2,up2,vp2,thlp2,rtp2,rtpthlp,sclrp2,sclrprtp,sclrpthlp,[nzm,nzt,ngrdcol,sclr_dim_transport]) Constructing wrapper function "f2py_stats_accumulate"... getarrdims:warning: assumed shape array, using 0 instead of '*' f2py_stats_accumulate(sclr_dim,edsclr_dim,invrs_dzm,zt,dzm,dzt,dt,k_lb_zm,k_ub_zm,l_implemented,l_host_applies_sfc_fluxes,l_stability_correct_tau_zm,clubb_params,um,vm,upwp,vpwp,up2,vp2,thlm,rtm,thlm_before,rtm_before,thlm_forcing,rtm_forcing,wpthlp_sfc,wprtp_sfc,wprtp,wpthlp,wp2,wp3,rtp2,rtp3,thlp2,thlp3,rtpthlp,wpthvp,wp2thvp,wp2up,rtpthvp,thlpthvp,p_in_pa,exner,rho,rho_zm,rho_ds_zm,rho_ds_zt,thv_ds_zm,thv_ds_zt,wm_zt,wm_zm,rcm,wprcp,rc_coef,rc_coef_zm,rcm_zm,rtm_zm,thlm_zm,cloud_frac,ice_supersat_frac,cloud_frac_zm,ice_supersat_frac_zm,rcm_in_layer,cloud_cover,rcm_supersat_adj,sigma_sqd_w,thvm,ug,vg,lscale,wpthlp2,wp2thlp,wprtp2,wp2rtp,lscale_up,lscale_down,kh_zt,wp2rcp,wprtpthlp,rsat,wpup2,wpvp2,wp2up2,wp2vp2,wp4,tau_zm,kh_zm,thlprcp,rtprcp,rcp2,em,wp3_on_wp2,wp3_on_wp2_zt,skw_velocity,ddzt_umvm_sqd,stability_correction,a3_coef,w_up_in_cloud,w_down_in_cloud,cloudy_updraft_frac,cloudy_downdraft_frac,sclrm,sclrp2,sclrprtp,sclrpthlp,sclrm_forcing,sclrpthvp,wpsclrp,sclrprcp,wp2sclrp,wpsclrp2,wpsclrprtp,wpsclrpthlp,wpedsclrp,edsclrm,edsclrm_forcing,saturation_formula,l_call_pdf_closure_twice,[nzm,nzt,ngrdcol,sclr_dim_transport,edsclr_dim_transport]) Constructing wrapper function "f2py_pdf_closure_driver"... getarrdims:warning: assumed shape array, using 0 instead of '*' rtm,rcm,cloud_frac,ice_supersat_frac,wprcp,sigma_sqd_w,wpthvp,wp2thvp,wp2up,rtpthvp,thlpthvp,rc_coef,rcm_in_layer,cloud_cover,rcp2_zt,thlprcp,rc_coef_zm,sclrpthvp,wpup2,wpvp2,wp2up2,wp2vp2,wp4,wp2rtp,wprtp2,wp2thlp,wpthlp2,wprtpthlp,wp2rcp,rtprcp,rcp2,uprcp,vprcp,w_up_in_cloud,w_down_in_cloud,cloudy_updraft_frac,cloudy_downdraft_frac,skw_velocity,cloud_frac_zm,ice_supersat_frac_zm,rtm_zm,thlm_zm,rcm_zm,rcm_supersat_adj,wp2sclrp,wpsclrp2,sclrprcp,wpsclrprtp,wpsclrpthlp = f2py_pdf_closure_driver(dt,hydromet_dim,sclr_dim,sclr_tol,wprtp,thlm,wpthlp,rtp2,rtp3,thlp2,thlp3,rtpthlp,wp2,wp3,wm_zm,wm_zt,um,up2,upwp,up3,vm,vp2,vpwp,vp3,p_in_pa,exner,thv_ds_zm,thv_ds_zt,rtm_ref,wphydrometp,wp2hmp,rtphmp_zt,thlphmp_zt,sclrm,wpsclrp,sclrp2,sclrprtp,sclrpthlp,sclrp3,p_sfc,l_samp_stats_in_pdf_call,mixt_frac_max_mag,ts_nudge,rtm_min,rtm_nudge_max_altitude,clubb_params,iipdf_type,saturation_formula,l_rtm_nudge,l_trapezoidal_rule_zt,l_trapezoidal_rule_zm,l_call_pdf_closure_twice,l_use_cloud_cover,l_rcm_supersat_adj,l_mix_rat_hm,rtm,[nzm,nzt,ngrdcol,hydromet_dim_transport,sclr_dim_transport]) Constructing wrapper function "f2py_calc_turb_adv_range"... low_lev_effect,high_lev_effect = f2py_calc_turb_adv_range(nzt,dt,w_1_zm,w_2_zm,varnce_w_1_zm,varnce_w_2_zm,mixt_frac_zm,[nzm,ngrdcol]) Constructing wrapper function "f2py_monotonic_turbulent_flux_limit"... xm,wpxp = f2py_monotonic_turbulent_flux_limit(solve_type,dt,xm_old,xp2,wm_zt,xm_forcing,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,xp2_threshold,xm_tol,l_implemented,low_lev_effect,high_lev_effect,tridiag_solve_method,l_upwind_xm_ma,l_mono_flux_lim_spikefix,xm,wpxp,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_precip_fraction"... getarrdims:warning: assumed shape array, using 0 instead of '*' precip_frac,precip_frac_1,precip_frac_2,precip_frac_tol = f2py_precip_fraction(hydromet_dim,hydromet,cloud_frac,cloud_frac_1,l_mix_rat_hm,l_frozen_hm,hydromet_tol,cloud_frac_2,ice_supersat_frac,ice_supersat_frac_1,ice_supersat_frac_2,mixt_frac,clubb_params,[nzt,ngrdcol,hydromet_dim_transport]) Constructing wrapper function "f2py_calc_params_ly93"... mu_x_1,mu_x_2,sigma_x_1_sqd,sigma_x_2_sqd = f2py_calc_params_ly93(xm,xp2,skx,mixt_frac,[nz,ngrdcol]) Constructing wrapper function "f2py_ly93_driver"... mu_w_1,mu_w_2,mu_rt_1,mu_rt_2,mu_thl_1,mu_thl_2,sigma_w_1_sqd,sigma_w_2_sqd,sigma_rt_1_sqd,sigma_rt_2_sqd,sigma_thl_1_sqd,sigma_thl_2_sqd,mixt_frac = f2py_ly93_driver(wm,rtm,thlm,wp2,rtp2,thlp2,skw,skrt,skthl,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_setter_var_params"... mu_x_1,mu_x_2,sigma_x_1,sigma_x_2,mixt_frac,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd = f2py_calc_setter_var_params(xm,xp2,skx,sgn_wpxp,f_x,zeta_x,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_responder_params"... mu_x_1,mu_x_2,sigma_x_1_sqd,sigma_x_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd = f2py_calc_responder_params(xm,xp2,skx,sgn_wpxp,f_x,mixt_frac,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_limits_f_x_responder"... min_f_x,max_f_x = f2py_calc_limits_f_x_responder(mixt_frac,skx,sgn_wpxp,max_skx2_pos_skx_sgn_wpxp,max_skx2_neg_skx_sgn_wpxp,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_l_x_skx_fnc"... big_l_x_1,big_l_x_2 = f2py_calc_l_x_skx_fnc(skx,sgn_wpxp,small_l_x_1,small_l_x_2) Constructing wrapper function "f2py_calc_setter_parameters_tsdadg"... mu_x_1,mu_x_2,sigma_x_1_sqd,sigma_x_2_sqd,mixt_frac,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd = f2py_calc_setter_parameters_tsdadg(xm,xp2,skx,sgn_wpxp,big_l_x_1,big_l_x_2) Constructing wrapper function "f2py_calc_coef_wp4_implicit"... coef_wp4_implicit = f2py_calc_coef_wp4_implicit(mixt_frac,f_w,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_coef_wpxp2_implicit"... coef_wpxp2_implicit = f2py_calc_coef_wpxp2_implicit(wp2,xp2,wpxp,sgn_wpxp,mixt_frac,f_w,f_x,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_coefs_wp2xp_semiimpl"... coef_wp2xp_implicit,term_wp2xp_explicit = f2py_calc_coefs_wp2xp_semiimpl(wp2,xp2,sgn_wpxp,mixt_frac,f_w,f_x,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_coefs_wpxpyp_semiimpl"... coef_wpxpyp_implicit,term_wpxpyp_explicit = f2py_calc_coefs_wpxpyp_semiimpl(wp2,xp2,yp2,wpxp,wpyp,sgn_wpxp,sgn_wpyp,mixt_frac,f_w,f_x,f_y,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd,coef_sigma_y_1_sqd,coef_sigma_y_2_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_luhar_params"... mixt_frac,big_m,small_m = f2py_calc_luhar_params(skx,wpxp,xp2,x_tol_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_close_luhar_pdf"... sigma_sqd_x_1,sigma_sqd_x_2,varnce_x_1,varnce_x_2,x_1_n,x_2_n,x_1,x_2 = f2py_close_luhar_pdf(xm,xp2,mixt_frac,small_m,wpxp,x_tol_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_adg1_w_closure"... w_1,w_2,w_1_n,w_2_n,varnce_w_1,varnce_w_2,mixt_frac = f2py_adg1_w_closure(wm,wp2,skw,sigma_sqd_w,sqrt_wp2,mixt_frac_max_mag,[nz,ngrdcol]) Constructing wrapper function "f2py_tsdadg_pdf_driver"... mu_w_1,mu_w_2,mu_rt_1,mu_rt_2,mu_thl_1,mu_thl_2,sigma_w_1_sqd,sigma_w_2_sqd,sigma_rt_1_sqd,sigma_rt_2_sqd,sigma_thl_1_sqd,sigma_thl_2_sqd,mixt_frac = f2py_tsdadg_pdf_driver(wm,rtm,thlm,wp2,rtp2,thlp2,skw,skrt,skthl,wprtp,wpthlp,[nz,ngrdcol]) Constructing wrapper function "f2py_adg2_pdf_driver"... w_1,w_2,rt_1,rt_2,thl_1,thl_2,varnce_w_1,varnce_w_2,varnce_rt_1,varnce_rt_2,varnce_thl_1,varnce_thl_2,mixt_frac,alpha_rt,alpha_thl,sigma_sqd_w,sclr_1,sclr_2,varnce_sclr_1,varnce_sclr_2,alpha_sclr = f2py_adg2_pdf_driver(sclr_dim,sclr_tol,wm,rtm,thlm,wp2,rtp2,thlp2,skw,wprtp,wpthlp,sqrt_wp2,beta,sclrm,sclrp2,wpsclrp,l_scalar_calc,[nz,ngrdcol,sclr_dim_transport]) Constructing wrapper function "f2py_adg1_pdf_driver"... w_1,w_2,rt_1,rt_2,thl_1,thl_2,u_1,u_2,v_1,v_2,varnce_w_1,varnce_w_2,varnce_rt_1,varnce_rt_2,varnce_thl_1,varnce_thl_2,varnce_u_1,varnce_u_2,varnce_v_1,varnce_v_2,mixt_frac,alpha_rt,alpha_thl,alpha_u,alpha_v,sclr_1,sclr_2,varnce_sclr_1,varnce_sclr_2,alpha_sclr = f2py_adg1_pdf_driver(sclr_dim,sclr_tol,wm,rtm,thlm,um,vm,wp2,rtp2,thlp2,up2,vp2,skw,wprtp,wpthlp,upwp,vpwp,sqrt_wp2,sigma_sqd_w,beta,mixt_frac_max_mag,sclrm,sclrp2,wpsclrp,l_scalar_calc,[nz,ngrdcol,sclr_dim_transport]) Constructing wrapper function "f2py_luhar_3d_pdf_driver"... w_1,w_2,rt_1,rt_2,thl_1,thl_2,varnce_w_1,varnce_w_2,varnce_rt_1,varnce_rt_2,varnce_thl_1,varnce_thl_2,mixt_frac = f2py_luhar_3d_pdf_driver(wm,rtm,thlm,wp2,rtp2,thlp2,skw,skrt,skthl,wprtp,wpthlp,[nz,ngrdcol]) Constructing wrapper function "f2py_calculate_w_params"... mu_w_1,mu_w_2,sigma_w_1,sigma_w_2,mixt_frac,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd = f2py_calculate_w_params(wm,wp2,skw,f_w,zeta_w,[nz,ngrdcol]) Constructing wrapper function "f2py_calculate_responder_params"... mu_x_1,mu_x_2,sigma_x_1_sqd,sigma_x_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd = f2py_calculate_responder_params(xm,xp2,skx,wpxp,wp2,f_w,mixt_frac,[nz,ngrdcol]) Constructing wrapper function "f2py_calculate_coef_wp4_implicit"... coef_wp4_implicit = f2py_calculate_coef_wp4_implicit(mixt_frac,f_w,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_coef_wp2xp_implicit"... coef_wp2xp_implicit = f2py_calc_coef_wp2xp_implicit(wp2,mixt_frac,f_w,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_calc_coefs_wpxp2_semiimpl"... coef_wpxp2_implicit,term_wpxp2_explicit = f2py_calc_coefs_wpxp2_semiimpl(wp2,wpxp,mixt_frac,f_w,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd,[nz,ngrdcol]) Constructing wrapper function "f2py_new_pdf_driver"... getarrdims:warning: assumed shape array, using 0 instead of '*' skrt,skthl,mu_w_1,mu_w_2,mu_rt_1,mu_rt_2,mu_thl_1,mu_thl_2,sigma_w_1_sqd,sigma_w_2_sqd,sigma_rt_1_sqd,sigma_rt_2_sqd,sigma_thl_1_sqd,sigma_thl_2_sqd,mixt_frac = f2py_new_pdf_driver(wm,rtm,thlm,wp2,rtp2,thlp2,skw,wprtp,wpthlp,rtpthlp,clubb_params,skrt,skthl,[nz,ngrdcol]) Constructing wrapper function "f2py_new_hybrid_pdf_driver"... skrt,skthl,sku,skv,sksclr,mu_w_1,mu_w_2,mu_rt_1,mu_rt_2,mu_thl_1,mu_thl_2,mu_u_1,mu_u_2,mu_v_1,mu_v_2,sigma_w_1_sqd,sigma_w_2_sqd,sigma_rt_1_sqd,sigma_rt_2_sqd,sigma_thl_1_sqd,sigma_thl_2_sqd,sigma_u_1_sqd,sigma_u_2_sqd,sigma_v_1_sqd,sigma_v_2_sqd,mu_sclr_1,mu_sclr_2,sigma_sclr_1_sqd,sigma_sclr_2_sqd,mixt_frac,sigma_sqd_w = f2py_new_hybrid_pdf_driver(sclr_dim,wm,rtm,thlm,um,vm,wp2,rtp2,thlp2,up2,vp2,skw,wprtp,wpthlp,upwp,vpwp,sclrm,sclrp2,wpsclrp,gamma_skw_fnc,slope_coef_spread_dg_means_w,pdf_component_stdev_factor_w,skrt,skthl,sku,skv,sksclr,[nz,ngrdcol,sclr_dim_transport]) Constructing wrapper function "f2py_compute_sigma_sqd_w"... getarrdims:warning: assumed shape array, using 0 instead of '*' sigma_sqd_w = f2py_compute_sigma_sqd_w(wp3,wp2,thlp2,rtp2,up2,vp2,wpthlp,wprtp,upwp,vpwp,clubb_params,l_predict_upwp_vpwp,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_fill_holes_vertical"... field = f2py_fill_holes_vertical(threshold,lower_hf_level,upper_hf_level,dz,rho_ds,grid_dir_indx,fill_holes_type,field,[nz,ngrdcol]) Constructing wrapper function "f2py_fill_holes_wp2_from_horz_tke"... wp2,up2,vp2 = f2py_fill_holes_wp2_from_horz_tke(threshold,lower_hf_level,upper_hf_level,wp2,up2,vp2,[nz,ngrdcol]) Constructing wrapper function "f2py_clip_rcm"... rcm = f2py_clip_rcm(rtm,message,rcm,[nzt,ngrdcol]) Constructing wrapper function "f2py_clip_covar"... xpyp,xpyp_chnge = f2py_clip_covar(solve_type,xp2,yp2,xpyp,[nzm,ngrdcol]) Constructing wrapper function "f2py_clip_variance"... xp2 = f2py_clip_variance(solve_type,dt,threshold_lo,xp2,[nzm,ngrdcol]) Constructing wrapper function "f2py_pos_definite_adj"... field_np1,flux_np1,field_pd,flux_pd = f2py_pos_definite_adj(dt,field_np1,flux_np1,field_n,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_clip_skewness"... wp3 = f2py_clip_skewness(dt,sfc_elevation,skw_max_mag,wp2_zt,l_use_wp3_lim_with_smth_heaviside,wp3,[nzt,ngrdcol]) Constructing wrapper function "f2py_clip_covars_denom"... wprtp_cl_num,wpthlp_cl_num,upwp_cl_num,vpwp_cl_num,wprtp,wpthlp,upwp,vpwp,wpsclrp,upwp_pert,vpwp_pert = f2py_clip_covars_denom(sclr_dim,dt,rtp2,thlp2,up2,vp2,wp2,sclrp2,l_tke_aniso,l_linearize_pbl_winds,l_predict_upwp_vpwp,wprtp_cl_num,wpthlp_cl_num,upwp_cl_num,vpwp_cl_num,wprtp,wpthlp,upwp,vpwp,wpsclrp,upwp_pert,vpwp_pert,[nzm,ngrdcol,sclr_dim_transport]) Constructing wrapper function "f2py_calc_brunt_vaisala_freq_sqd"... brunt_vaisala_freq_sqd,brunt_vaisala_freq_sqd_mixed,brunt_vaisala_freq_sqd_smth = f2py_calc_brunt_vaisala_freq_sqd(nzm,thlm,exner,rtm,rcm,p_in_Pa,thvm,ice_supersat_frac,saturation_formula,l_brunt_vaisala_freq_moist,l_use_thvm_in_bv_freq,l_modify_limiters_for_cnvg_test,bv_efold,T0,[nzt,ngrdcol]) Constructing wrapper function "f2py_compute_cx_fnc_richardson"... getarrdims:warning: assumed shape array, using 0 instead of '*' Cx_fnc_Richardson = f2py_compute_cx_fnc_richardson(nzt,Lscale_zm,ddzt_umvm_sqd,rho_ds_zm,brunt_vaisala_freq_sqd,brunt_vaisala_freq_sqd_mixed,clubb_params,l_use_shear_Richardson,l_modify_limiters_for_cnvg_test,[nzm,ngrdcol]) Constructing wrapper function "f2py_calc_stability_correction"... stability_correction = f2py_calc_stability_correction(brunt_vaisala_freq_sqd,lscale_zm,em,lambda0_stability_coef,[nzm,ngrdcol]) Constructing wrapper function "f2py_diagnose_lscale_from_tau"... getarrdims:warning: assumed shape array, using 0 instead of '*' invrs_tau_zt,invrs_tau_zm,invrs_tau_sfc,invrs_tau_no_n2_zm,invrs_tau_bkgnd,invrs_tau_shear,invrs_tau_n2_iso,invrs_tau_wp2_zm,invrs_tau_xp2_zm,invrs_tau_wp3_zm,invrs_tau_wp3_zt,invrs_tau_wpxp_zm,tau_max_zm,tau_max_zt,tau_zm,tau_zt,lscale,lscale_up,lscale_down = f2py_diagnose_lscale_from_tau(upwp_sfc,vpwp_sfc,ddzt_umvm_sqd,ice_supersat_frac,em,sqrt_em_zt,ufmin,tau_const,sfc_elevation,lscale_max,clubb_params,l_e3sm_config,l_smooth_heaviside_tau_wpxp,brunt_vaisala_freq_sqd_smth,ri_zm,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_calc_lscale_directly"... getarrdims:warning: assumed shape array, using 0 instead of '*' lscale,lscale_up,lscale_down = f2py_calc_lscale_directly(l_implemented,p_in_pa,exner,rtm,thlm,thvm,newmu,rtp2_zt,thlp2_zt,rtpthlp_zt,em,thv_ds_zt,lscale_max,lmin,clubb_params,saturation_formula,l_lscale_plume_centered,[ngrdcol,nzm,nzt]) Constructing wrapper function "f2py_advance_xp3"... getarrdims:warning: assumed shape array, using 0 instead of '*' rtp3,thlp3,sclrp3,up3,vp3 = f2py_advance_xp3(sclr_dim,sclr_tol,dt,rtm,thlm,rtp2,thlp2,wprtp,wpthlp,wprtp2,wpthlp2,rho_ds_zm,invrs_rho_ds_zt,invrs_tau_zt,tau_max_zt,sclrm,sclrp2,wpsclrp,wpsclrp2,wp2,wp3,upwp,vpwp,up2,vp2,thvm,sigma_sqd_w,clubb_params,l_lmm_stepping,rtp3,thlp3,sclrp3,up3,vp3,[nzm,nzt,ngrdcol,sclr_dim_transport]) Constructing wrapper function "f2py_diagnose_xp3"... getarrdims:warning: assumed shape array, using 0 instead of '*' rtp3,thlp3,up3,vp3,sclrp3 = f2py_diagnose_xp3(sclr_dim,sclr_tol,iipdf_type,clubb_params,wp2,wp3,thvm,wprtp,wpthlp,rtp2,thlp2,upwp,vpwp,up2,vp2,sigma_sqd_w,wpsclrp,sclrp2,rtp3,thlp3,up3,vp3,sclrp3,[nzm,nzt,ngrdcol,sclr_dim_transport]) Constructing wrapper function "f2py_advance_wp2_wp3"... getarrdims:warning: assumed shape array, using 0 instead of '*' up2,vp2,wp2,wp3,wp2_zt = f2py_advance_wp2_wp3(dt,sfc_elevation,fcor_y,sigma_sqd_w,wm_zm,wm_zt,wp3_on_wp2,wpup2,wpvp2,wp2up2,wp2vp2,wp4,wpthvp,wp2thvp,wp2up,um,vm,upwp,vpwp,em,kh_zm,kh_zt,invrs_tau_c4_zm,invrs_tau_wp3_zt,invrs_tau_c1_zm,skw_zm,skw_zt,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,thv_ds_zm,thv_ds_zt,mixt_frac,cx_fnc_richardson,lhs_splat_wp2,lhs_splat_wp3,wprtp,wpthlp,rtp2,thlp2,clubb_params,iipdf_type,penta_solve_method,fill_holes_type,l_min_wp2_from_corr_wx,l_upwind_xm_ma,l_tke_aniso,l_standard_term_ta,l_partial_upwind_wp3,l_damp_wp2_using_em,l_use_c11_richardson,l_damp_wp3_skw_squared,l_lmm_stepping,l_use_tke_in_wp3_pr_turb_term,l_use_tke_in_wp2_wp3_k_dfsn,l_use_wp3_lim_with_smth_heaviside,l_wp2_fill_holes_tke,l_ho_nontrad_coriolis,up2,vp2,wp2,wp3,wp2_zt,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_advance_windm_edsclrm"... getarrdims:warning: assumed shape array, using 0 instead of '*' upwp_cl_num,vpwp_cl_num,um,vm,thlm,rtm,edsclrm,upwp,vpwp,wpedsclrp,um_pert,vm_pert,upwp_pert,vpwp_pert = f2py_advance_windm_edsclrm(edsclr_dim,dt,wm_zt,kh_zm,clubb_params,ug,vg,um_ref,vm_ref,wp2,up2,vp2,um_forcing,vm_forcing,edsclrm_forcing,p_in_pa,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zt,fcor,l_implemented,ts_nudge,tridiag_solve_method,l_predict_upwp_vpwp,l_upwind_xm_ma,l_uv_nudge,l_tke_aniso,l_lmm_stepping,l_linearize_pbl_winds,l_do_expldiff_rtm_thlm,fill_holes_type,upwp_cl_num,vpwp_cl_num,um,vm,thlm,rtm,edsclrm,upwp,vpwp,wpedsclrp,um_pert,vm_pert,upwp_pert,vpwp_pert,[nzm,nzt,ngrdcol,edsclr_dim_transport]) Constructing wrapper function "f2py_advance_xp2_xpyp"... getarrdims:warning: assumed shape array, using 0 instead of '*' rtp2,thlp2,rtpthlp,up2,vp2,sclrp2,sclrprtp,sclrpthlp = f2py_advance_xp2_xpyp(sclr_dim,sclr_tol,invrs_tau_xp2_zm,invrs_tau_c4_zm,invrs_tau_c14_zm,wm_zm,rtm,wprtp,thlm,wpthlp,wpthvp,um,vm,wp2,wp2_zt,wp3,upwp,vpwp,sigma_sqd_w,wprtp2,wpthlp2,wprtpthlp,kh_zt,rtp2_forcing,thlp2_forcing,rtpthlp_forcing,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,thv_ds_zm,cloud_frac,wp3_on_wp2,wp3_on_wp2_zt,dt,fcor_y,sclrm,wpsclrp,wpsclrp2,wpsclrprtp,wpsclrpthlp,lhs_splat_wp2,clubb_params,iipdf_type,tridiag_solve_method,fill_holes_type,l_ho_nontrad_coriolis,l_min_xp2_from_corr_wx,l_c2_cloud_frac,l_upwind_xpyp_ta,l_godunov_upwind_xpyp_ta,l_lmm_stepping,rtp2,thlp2,rtpthlp,up2,vp2,sclrp2,sclrprtp,sclrpthlp,[nzm,nzt,ngrdcol,sclr_dim_transport]) Constructing wrapper function "f2py_update_xp2_mc"... rtp2_mc,thlp2_mc,wprtp_mc,wpthlp_mc,rtpthlp_mc = f2py_update_xp2_mc(dt,cloud_frac,rcm,rvm,thlm,wm,exner,rrm_evap,rtp2_mc,thlp2_mc,wprtp_mc,wpthlp_mc,rtpthlp_mc,[nzm,nzt,ngrdcol]) Constructing wrapper function "f2py_advance_xm_wpxp"... getarrdims:warning: assumed shape array, using 0 instead of '*' wprtp_cl_num,wpthlp_cl_num,upwp_cl_num,vpwp_cl_num,rtm,wprtp,thlm,wpthlp,sclrm,wpsclrp,um,upwp,vm,vpwp,um_pert,vm_pert,upwp_pert,vpwp_pert = f2py_advance_xm_wpxp(sclr_dim,sclr_tol,dt,sigma_sqd_w,wm_zm,wm_zt,wp2,lscale_zm,wp3_on_wp2,wp3_on_wp2_zt,kh_zt,kh_zm,stability_correction,invrs_tau_c6_zm,tau_max_zm,skw_zm,wp2rtp,rtpthvp,rtm_forcing,wprtp_forcing,rtm_ref,wp2thlp,thlpthvp,thlm_forcing,wpthlp_forcing,thlm_ref,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,thv_ds_zm,rtp2,thlp2,w_1_zm,w_2_zm,varnce_w_1_zm,varnce_w_2_zm,mixt_frac_zm,l_implemented,em,wp2sclrp,sclrpthvp,sclrm_forcing,sclrp2,cx_fnc_richardson,um_forcing,vm_forcing,ug,vg,wpthvp,fcor,fcor_y,um_ref,vm_ref,up2,vp2,uprcp,vprcp,rc_coef_zm,clubb_params,ts_nudge,iipdf_type,penta_solve_method,tridiag_solve_method,fill_holes_type,l_predict_upwp_vpwp,l_ho_nontrad_coriolis,l_ho_trad_coriolis,l_diffuse_rtm_and_thlm,l_stability_correct_kh_n2_zm,l_godunov_upwind_wpxp_ta,l_upwind_xm_ma,l_uv_nudge,l_tke_aniso,l_diag_lscale_from_tau,l_use_c7_richardson,l_lmm_stepping,l_enable_relaxed_clipping,l_linearize_pbl_winds,l_mono_flux_lim_thlm,l_mono_flux_lim_rtm,l_mono_flux_lim_um,l_mono_flux_lim_vm,l_mono_flux_lim_spikefix,wprtp_cl_num,wpthlp_cl_num,upwp_cl_num,vpwp_cl_num,rtm,wprtp,thlm,wpthlp,sclrm,wpsclrp,um,upwp,vm,vpwp,um_pert,vm_pert,upwp_pert,vpwp_pert,[nzm,nzt,ngrdcol,sclr_dim_transport]) Wrote C/API module "clubb_f2py" to file "/tmp/tmpzptckvp_/src.linux-x86_64-3.10/clubb_f2pymodule.c" adding '/tmp/tmpzptckvp_/src.linux-x86_64-3.10/fortranobject.c' to sources. adding '/tmp/tmpzptckvp_/src.linux-x86_64-3.10' to include_dirs. copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.c -> /tmp/tmpzptckvp_/src.linux-x86_64-3.10 copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.h -> /tmp/tmpzptckvp_/src.linux-x86_64-3.10 build_src: building npy-pkg config files running build_ext customize UnixCCompiler customize UnixCCompiler using build_ext building 'clubb_f2py' extension compiling C sources C compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-m5i6qvtqmd4lm4sd2zvpgk75ong5ehbm/bin/gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC creating /tmp/tmpzptckvp_/tmp creating /tmp/tmpzptckvp_/tmp/tmpzptckvp_ creating /tmp/tmpzptckvp_/tmp/tmpzptckvp_/src.linux-x86_64-3.10 compile options: '-DNPY_DISABLE_OPTIMIZATION=1 -I/tmp/tmpzptckvp_/src.linux-x86_64-3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c' gcc: /tmp/tmpzptckvp_/src.linux-x86_64-3.10/clubb_f2pymodule.c gcc: /tmp/tmpzptckvp_/src.linux-x86_64-3.10/fortranobject.c In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from /tmp/tmpzptckvp_/src.linux-x86_64-3.10/fortranobject.h:13, from /tmp/tmpzptckvp_/src.linux-x86_64-3.10/fortranobject.c:2: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from /tmp/tmpzptckvp_/src.linux-x86_64-3.10/fortranobject.h:13, from /tmp/tmpzptckvp_/src.linux-x86_64-3.10/clubb_f2pymodule.c:16: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ /tmp/tmpzptckvp_/src.linux-x86_64-3.10/clubb_f2pymodule.c:142:12: warning: 'f2py_size' defined but not used [-Wunused-function] 142 | static int f2py_size(PyArrayObject* var, ...) | ^~~~~~~~~ x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-rpath,$ORIGIN -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 /tmp/tmpzptckvp_/tmp/tmpzptckvp_/src.linux-x86_64-3.10/clubb_f2pymodule.o /tmp/tmpzptckvp_/tmp/tmpzptckvp_/src.linux-x86_64-3.10/fortranobject.o -L/home/jenkins/workspace/clubb_new_tuner_test/clubb_python_api -lclubb_f2py_backend -o ./clubb_f2py.cpython-310-x86_64-linux-gnu.so Removing build directory /tmp/tmpzptckvp_ [100%] Copying clubb_f2py extension into clubb_python_api/ [100%] Built target clubb_f2py Install the project... -- Install configuration: "Debug" -- Installing: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_tuner" to "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib" -- Installing: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/G_unit_tests" to "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib" -- Installing: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_thread_test" to "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib" -- Installing: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_standalone" to "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib" -- Installing: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_driver_test" to "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib" -- Installing: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_standalone_loss -- Set runtime path of "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib" -- Installing: /home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_loss_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_new_tuner_test/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types Build completed successfully, and all source code checks passed. [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Loss Driver Test) [Pipeline] sh + ulimit -s 8388608 + python run_scripts/run_scm_loss.py -driver_test -out_dir output/new_tuner_test/loss_driver_fortran -cases bomex -fields cloud_frac,rcm - using executable: /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/../install/latest/clubb_loss_driver_test - normalized benchmark: /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/loss_driver_fortran/bomex_normalized_benchmark.nc - loss timing: absolute_window=[10800, 21600] s, model_time_initial=0 s, model_time_final=21600 s, stats_tstart=10800 s, stats_tend=21600 s, stats_tsamp=60 s, stats_tout=10800 s, num_time_windows=1 =================== Running bomex loss =================== benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0093 CLUBB-TIMER time_clubb_advance = 0.6945 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7098 benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0094 CLUBB-TIMER time_clubb_advance = 0.6930 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7083 CLUBB-TIMER time_loop_init = 0.0093 CLUBB-TIMER time_clubb_advance = 0.6923 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7077 Manual loss BFB check passed benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0093 CLUBB-TIMER time_clubb_advance = 0.6936 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7089 Tweaked-parameter test passed benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0093 CLUBB-TIMER time_clubb_advance = 0.6928 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7081 benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0093 CLUBB-TIMER time_clubb_advance = 0.6926 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7078 Reinitialize loss BFB check passed variable scaled_rmse_col1 corr_col1 std_ratio_col1 crmse_norm_col1 bias_norm_col1 best_col cloud_frac 1.83763273E+00 9.41346842E-01 5.37700085E-01 5.26114843E-01 -4.01991405E-01 col1 rcm 1.23911211E+01 7.32714439E-01 5.07828973E-01 7.16730789E-01 -5.79131814E-01 col1 [Pipeline] sh + ulimit -s 8388608 + python run_scripts/run_scm_loss.py -python -driver_test -out_dir output/new_tuner_test/loss_driver_python -cases bomex -fields cloud_frac,rcm - using executable: /usr/bin/python -m tuner.clubb_loss_driver_test - normalized benchmark: /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/loss_driver_python/bomex_normalized_benchmark.nc - loss timing: absolute_window=[10800, 21600] s, model_time_initial=0 s, model_time_final=21600 s, stats_tstart=10800 s, stats_tend=21600 s, stats_tsamp=60 s, stats_tout=10800 s, num_time_windows=1 =================== Running bomex loss =================== benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0096 CLUBB-TIMER time_clubb_advance = 0.6941 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7096 benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0096 CLUBB-TIMER time_clubb_advance = 0.6925 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7079 CLUBB-TIMER time_loop_init = 0.0096 CLUBB-TIMER time_clubb_advance = 0.6918 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7073 benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0096 CLUBB-TIMER time_clubb_advance = 0.6931 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7085 benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0096 CLUBB-TIMER time_clubb_advance = 0.6925 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7080 benchmark timing:window 1 records 181 360 absolute_window 10800 21600 benchmark_window 10800.000000000000 21600.000000000000 matched_window 10860.000000000000 21600.000000000000 closing 65536 CLUBB-TIMER time_loop_init = 0.0096 CLUBB-TIMER time_clubb_advance = 0.6925 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.7079 Manual loss BFB check passed Tweaked-parameter test passed Reinitialize loss BFB check passed variable scaled_rmse_col1 corr_col1 std_ratio_col1 crmse_norm_col1 bias_norm_col1 best_col cloud_frac 1.83763273E+00 9.41346842E-01 5.37700085E-01 5.26114843E-01 -4.01991405E-01 col1 rcm 1.23911211E+01 7.32714439E-01 5.07828973E-01 7.16730789E-01 -5.79131814E-01 col1 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Simple Tuner Command) [Pipeline] sh + ulimit -s 8388608 + python run_scripts/run_tuner_job.py -cases bomex -fields cloud_frac -params C8:0.2:0.8 -run_top complete Tuner Job --------- job_dir /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/cli_bomex_20260626_011157_697945_2270386 request /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/cli_bomex_20260626_011157_697945_2270386/request.json log /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/cli_bomex_20260626_011157_697945_2270386/worker.log Configuration cases bomex default window, windows=default fields cloud_frac parameters C8 0.2 -> 0.8 run strategy random, max_samples=8 estimated_samples 8 batch_size 8 max_workers 1 loss centered_rmse_bias aggregation mean_max poll_interval 1 s post_run complete, top_n=1, out=/home/jenkins/workspace/clubb_new_tuner_test/output Launching tuner. Press Ctrl-C once for graceful stop, twice to terminate. state: created | samples: 0 | elapsed: 00:00 | workers active/idle/init: 0/0/0 | queued cases: 0 | best: -- state: running | samples: 0/8 | elapsed: 00:00 | workers active/idle/init: 0/1/1 | queued cases: 0 | best: -- state: running | samples: 0/8 | elapsed: 00:01 | workers active/idle/init: 1/0/1 | queued cases: 0 | best: -- state: running | samples: 0/8 | elapsed: 00:02 | workers active/idle/init: 1/0/1 | queued cases: 0 | best: -- state: running | samples: 0/8 | elapsed: 00:03 | workers active/idle/init: 1/0/1 | queued cases: 0 | best: -- state: finished | samples: 8/8 | elapsed: 00:03 | workers active/idle/init: 0/0/0 | queued cases: 0 | best: 0.749489 (C8=0.736775) Running top 1 result(s) with params: /home/jenkins/workspace/clubb_new_tuner_test/output/tuner_top_20260626_011202_732038_2270386_params.in + /usr/bin/python /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/run_scm.py -out_dir /home/jenkins/workspace/clubb_new_tuner_test/output -params /home/jenkins/workspace/clubb_new_tuner_test/output/tuner_top_20260626_011202_732038_2270386_params.in bomex /home/jenkins/workspace/clubb_new_tuner_test/output/bomex.in - using executable: /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/../install/latest/clubb_standalone =================== Running bomex =================== 2026/06/26 01:12:02 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 = 1.00000000000000000000 C1b = 1.00000000000000000000 C1c = 1.00000000000000000000 C2rt = 2.00000000000000000000 C2thl = 2.00000000000000000000 C2rtthl = 2.00000000000000000000 C4 = 2.00000000000000000000 C_uu_shr = 0.40000000000000002220 C_uu_buoy = 0.29999999999999998890 C6rt = 2.00000000000000000000 C6rtb = 2.00000000000000000000 C6rtc = 1.00000000000000000000 C6thl = 2.00000000000000000000 C6thlb = 2.00000000000000000000 C6thlc = 1.00000000000000000000 C7 = 0.50000000000000000000 C7b = 0.50000000000000000000 C7c = 0.50000000000000000000 C8 = 0.73677475697986094527 C8b = 0.02000000000000000042 C10 = 3.29999999999999982236 C11 = 0.40000000000000002220 C11b = 0.40000000000000002220 C11c = 0.50000000000000000000 C12 = 1.00000000000000000000 C13 = 0.10000000000000000555 C14 = 1.00000000000000000000 C_wp2_pr_dfsn = 0.00000000000000000000 C_wp3_pr_tp = 0.00000000000000000000 C_wp3_pr_turb = 1.00000000000000000000 C_wp3_pr_dfsn = 0.00000000000000000000 C_wp2_splat = 0.00000000000000000000 C6rt_Lscale0 = 14.00000000000000000000 C6thl_Lscale0 = 14.00000000000000000000 C7_Lscale0 = 0.84999999999999997780 wpxp_L_thresh = 60.00000000000000000000 c_K = 0.20000000000000001110 c_K1 = 0.20000000000000001110 nu1 = 20.00000000000000000000 c_K2 = 0.02500000000000000139 nu2 = 1.00000000000000000000 c_K6 = 0.37500000000000000000 nu6 = 5.00000000000000000000 c_K8 = 5.00000000000000000000 nu8 = 20.00000000000000000000 c_K9 = 0.10000000000000000555 nu9 = 10.00000000000000000000 nu10 = 0.00000000000000000000 c_K_hm = 0.75000000000000000000 c_K_hmb = 0.75000000000000000000 K_hm_min_coef = 0.10000000000000000555 nu_hm = 1.50000000000000000000 slope_coef_spread_DG_means_w = 21.00000000000000000000 pdf_component_stdev_factor_w = 1.00000000000000000000 coef_spread_DG_means_rt = 0.80000000000000004441 coef_spread_DG_means_thl = 0.80000000000000004441 gamma_coef = 0.25000000000000000000 gamma_coefb = 0.25000000000000000000 gamma_coefc = 5.00000000000000000000 mu = 0.00100000000000000002 beta = 1.00000000000000000000 lmin_coef = 0.50000000000000000000 omicron = 0.50000000000000000000 zeta_vrnce_rat = 0.00000000000000000000 upsilon_precip_frac_rat = 0.55000000000000004441 lambda0_stability_coef = 0.02999999999999999889 mult_coef = 0.50000000000000000000 taumin = 90.00000000000000000000 taumax = 3600.00000000000000000000 Lscale_mu_coef = 2.00000000000000000000 Lscale_pert_coef = 0.10000000000000000555 alpha_corr = 0.14999999999999999445 Skw_denom_coef = 4.00000000000000000000 c_K10 = 1.00000000000000000000 c_K10h = 1.00000000000000000000 thlp2_rad_coef = 1.00000000000000000000 thlp2_rad_cloud_frac_thresh = 0.10000000000000000555 up2_sfc_coef = 4.00000000000000000000 Skw_max_mag = 10.00000000000000000000 C_invrs_tau_bkgnd = 1.10000000000000008882 C_invrs_tau_sfc = 0.10000000000000000555 C_invrs_tau_shear = 0.14999999999999999445 C_invrs_tau_N2 = 0.40000000000000002220 C_invrs_tau_N2_wp2 = 0.20000000000000001110 C_invrs_tau_N2_xp2 = 0.05000000000000000278 C_invrs_tau_N2_wpxp = 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 = 1.00000000000000000000 C_invrs_tau_wpxp_Ri = 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh = 0.00033000000000000000 xp3_coef_base = 0.25000000000000000000 xp3_coef_slope = 0.01000000000000000021 altitude_threshold = 100.00000000000000000000 rtp2_clip_coef = 0.50000000000000000000 Cx_min = 0.33000000000000001554 Cx_max = 0.94999999999999995559 Richardson_num_min = 0.25000000000000000000 Richardson_num_max = 400.00000000000000000000 a3_coef_min = 1.00000000000000000000 a_const = 1.80000000000000004441 bv_efold = 5.00000000000000000000 wpxp_Ri_exp = 0.50000000000000000000 z_displace = 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DNETCDF enabled -DCOAMPS_MICRO enabled -DTUNER disabled -DSILHS enabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = bomex nzmax = 75 grid_type = 1 deltaz = 40.000000000000000 zm_init = 0.0000000000000000 zm_top = 3500.0000000000000 zt_grid_fname = zm_grid_fname = day = 22 month = 6 year = 1969 lat_vals = 15.000000000000000 lon_vals = -56.500000000000000 sfc_elevation = 0.0000000000000000 time_initial = 0.0000000000000000 time_final = 21600.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 0 T_sfc = 288.00000000000000 p_sfc = 101500.00000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 3.7599999999999999E-005 fcor_y = 1.4087062250470739E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = T l_modify_ic_with_cubic_int = T l_modify_bc_for_cnvg_test = T l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/bomex time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_new_tuner_test/output/ fname_prefix = bomex stats_output_filename = bomex_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 0.0000000000000000 stats_tend = 21600.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- &microphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/bomex_corr_array_cloud.in and/or ../input/case_setups/bomex_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = simplified_bomex sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 100.00000000000000 F1 = 20.000000000000000 kappa = 119.00000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 2 penta_solve_method = 2 tridiag_solve_method = 2 grid_remap_method = 1 grid_adapt_in_time_method = 0 l_use_precip_frac = T l_predict_upwp_vpwp = T l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = T l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = T l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_tke_aniso = T l_vert_avg_closure = F l_trapezoidal_rule_zt = F l_trapezoidal_rule_zm = F l_call_pdf_closure_twice = F l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = F l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = F l_damp_wp2_using_em = T l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = T l_use_C7_Richardson = T l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = T l_damp_wp3_Skw_squared = T l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = T l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = T l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = F l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: bomex_sounding.in File exists? T Path to sclr_sounding: bomex_sclr_sounding.in File exists? T Path to edsclr_sounding: bomex_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 100.00000000000000 200.00000000000000 300.00000000000000 400.00000000000000 500.00000000000000 520.00000000000000 600.00000000000000 700.00000000000000 800.00000000000000 900.00000000000000 1000.0000000000000 1100.0000000000000 1200.0000000000000 1300.0000000000000 1400.0000000000000 1480.0000000000000 1500.0000000000000 1600.0000000000000 1700.0000000000000 1800.0000000000000 1900.0000000000000 2000.0000000000000 2099.9000000000001 2100.0000000000000 2200.0000000000000 2300.0000000000000 2400.0000000000000 2500.0000000000000 2600.0000000000000 2700.0000000000000 2800.0000000000000 2900.0000000000000 3000.0000000000000 3100.0000000000000 3200.0000000000000 3300.0000000000000 3400.0000000000000 3500.0000000000000 u = -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.5700000000000003 -8.3900000000000006 -8.2100000000000009 -8.0299999999999994 -7.8499999999999996 -7.6699999999999999 -7.4900000000000002 -7.3460000000000001 -7.3100000000000005 -7.1299999999999999 -6.9500000000000002 -6.7700000000000005 -6.5899999999999999 -6.4100000000000001 -6.2301799999999998 -6.2300000000000004 -6.0499999999999998 -5.8700000000000001 -5.6900000000000004 -5.5099999999999998 -5.3300000000000001 -5.1500000000000004 -4.9699999999999998 -4.7900000000000000 -4.6100000000000003 -4.4299999999999997 -4.2500000000000000 -4.0700000000000003 -3.8900000000000001 -3.7100000000000000 v = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 ug = -10.000000000000000 -9.8200000000000003 -9.6400000000000006 -9.4600000000000009 -9.2799999999999994 -9.0999999999999996 -9.0640000000000001 -8.9199999999999999 -8.7400000000000002 -8.5600000000000005 -8.3800000000000008 -8.1999999999999993 -8.0199999999999996 -7.8399999999999999 -7.6600000000000001 -7.4800000000000004 -7.3360000000000003 -7.3000000000000007 -7.1200000000000001 -6.9400000000000004 -6.7600000000000007 -6.5800000000000001 -6.4000000000000004 -6.2201800000000000 -6.2200000000000006 -6.0400000000000000 -5.8600000000000003 -5.6800000000000006 -5.5000000000000000 -5.3200000000000003 -5.1400000000000006 -4.9600000000000000 -4.7800000000000002 -4.6000000000000005 -4.4199999999999999 -4.2400000000000002 -4.0600000000000005 -3.8800000000000003 -3.7000000000000002 vg = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 theta = 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 298.69999999999999 299.00833333333333 299.39375000000001 299.77916666666670 300.16458333333333 300.55000000000001 300.93541666666664 301.32083333333333 301.70625000000001 302.09166666666664 302.39999999999998 302.63076923076920 303.78461538461534 304.93846153846152 306.09230769230766 307.24615384615385 308.39999999999998 308.75131499999998 308.75166666666667 309.10333333333330 309.45499999999998 309.80666666666667 310.15833333333330 310.50999999999999 310.86166666666668 311.21333333333331 311.56500000000000 311.91666666666669 312.26833333333332 312.62000000000000 312.97166666666669 313.32333333333332 313.67500000000001 rt = 1.7290000000000000E-002 1.7151538461538461E-002 1.7013076923076922E-002 1.6874615384615384E-002 1.6736153846153849E-002 1.6597692307692310E-002 1.6570000000000001E-002 1.6090000000000000E-002 1.5490000000000000E-002 1.4891282051282052E-002 1.4292564102564104E-002 1.3693846153846154E-002 1.3095128205128205E-002 1.2496410256410257E-002 1.1897692307692307E-002 1.1298974358974359E-002 1.0820000000000000E-002 1.0566153846153847E-002 9.2969230769230759E-003 8.0276923076923069E-003 6.7584615384615378E-003 5.4892307692307688E-003 4.2199999999999998E-003 4.0994539999999998E-003 4.0993333333333333E-003 3.9786666666666668E-003 3.8579999999999999E-003 3.7373333333333330E-003 3.6166666666666665E-003 3.4960000000000000E-003 3.3753333333333331E-003 3.2546666666666666E-003 3.1339999999999996E-003 3.0133333333333331E-003 2.8926666666666666E-003 2.7719999999999997E-003 2.6513333333333328E-003 2.5306666666666663E-003 2.4099999999999998E-003 p_in_Pa = -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 -4.3333331081081084E-004 -8.6666662162162168E-004 -1.2999999324324325E-003 -1.7333332432432434E-003 -2.1666665540540542E-003 -2.2533332162162165E-003 -2.5999998648648650E-003 -3.0333331756756759E-003 -3.4666664864864867E-003 -3.8999997972972975E-003 -4.3333331081081084E-003 -4.7666664189189188E-003 -5.1999997297297301E-003 -5.6333330405405405E-003 -6.0666663513513517E-003 -6.4133330000000002E-003 -6.4999999999999997E-003 -5.4166666111018502E-003 -4.3333332222037007E-003 -3.2499998333055508E-003 -2.1666664444074018E-003 -1.0833330555092523E-003 -1.0829999999998133E-006 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 When the l_diag_Lscale_from_tau flag is enabled, C2rt must have a value of 1. C2rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2thl must have a value of 1. C2thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rtthl must have a value of 1. C2rtthl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rt must have a value of 1. C6rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rtb must have a value of 1. C6rtb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thl must have a value of 1. C6thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thlb must have a value of 1. C6thlb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rt must have a value of 1. C2rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2thl must have a value of 1. C2thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rtthl must have a value of 1. C2rtthl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rt must have a value of 1. C6rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rtb must have a value of 1. C6rtb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thl must have a value of 1. C6thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thlb must have a value of 1. C6thlb = 2.0000000000000000 Warning in check_clubb_settings_api iteration: 1 / 360 -- time = 60.0 / 21600.0 iteration: 2 / 360 -- time = 120.0 / 21600.0 iteration: 3 / 360 -- time = 180.0 / 21600.0 iteration: 4 / 360 -- time = 240.0 / 21600.0 iteration: 5 / 360 -- time = 300.0 / 21600.0 iteration: 6 / 360 -- time = 360.0 / 21600.0 iteration: 7 / 360 -- time = 420.0 / 21600.0 iteration: 8 / 360 -- time = 480.0 / 21600.0 iteration: 9 / 360 -- time = 540.0 / 21600.0 iteration: 10 / 360 -- time = 600.0 / 21600.0 iteration: 11 / 360 -- time = 660.0 / 21600.0 iteration: 12 / 360 -- time = 720.0 / 21600.0 iteration: 13 / 360 -- time = 780.0 / 21600.0 iteration: 14 / 360 -- time = 840.0 / 21600.0 iteration: 15 / 360 -- time = 900.0 / 21600.0 iteration: 16 / 360 -- time = 960.0 / 21600.0 iteration: 17 / 360 -- time = 1020.0 / 21600.0 iteration: 18 / 360 -- time = 1080.0 / 21600.0 iteration: 19 / 360 -- time = 1140.0 / 21600.0 iteration: 20 / 360 -- time = 1200.0 / 21600.0 iteration: 21 / 360 -- 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/ 21600.0 iteration: 43 / 360 -- time = 2580.0 / 21600.0 iteration: 44 / 360 -- time = 2640.0 / 21600.0 iteration: 45 / 360 -- time = 2700.0 / 21600.0 iteration: 46 / 360 -- time = 2760.0 / 21600.0 iteration: 47 / 360 -- time = 2820.0 / 21600.0 iteration: 48 / 360 -- time = 2880.0 / 21600.0 iteration: 49 / 360 -- time = 2940.0 / 21600.0 iteration: 50 / 360 -- time = 3000.0 / 21600.0 iteration: 51 / 360 -- time = 3060.0 / 21600.0 iteration: 52 / 360 -- time = 3120.0 / 21600.0 iteration: 53 / 360 -- time = 3180.0 / 21600.0 iteration: 54 / 360 -- time = 3240.0 / 21600.0 iteration: 55 / 360 -- time = 3300.0 / 21600.0 iteration: 56 / 360 -- time = 3360.0 / 21600.0 iteration: 57 / 360 -- time = 3420.0 / 21600.0 iteration: 58 / 360 -- time = 3480.0 / 21600.0 iteration: 59 / 360 -- time = 3540.0 / 21600.0 iteration: 60 / 360 -- time = 3600.0 / 21600.0 iteration: 61 / 360 -- time = 3660.0 / 21600.0 iteration: 62 / 360 -- time = 3720.0 / 21600.0 iteration: 63 / 360 -- time = 3780.0 / 21600.0 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-- time = 6360.0 / 21600.0 iteration: 107 / 360 -- time = 6420.0 / 21600.0 iteration: 108 / 360 -- time = 6480.0 / 21600.0 iteration: 109 / 360 -- time = 6540.0 / 21600.0 iteration: 110 / 360 -- time = 6600.0 / 21600.0 iteration: 111 / 360 -- time = 6660.0 / 21600.0 iteration: 112 / 360 -- time = 6720.0 / 21600.0 iteration: 113 / 360 -- time = 6780.0 / 21600.0 iteration: 114 / 360 -- time = 6840.0 / 21600.0 iteration: 115 / 360 -- time = 6900.0 / 21600.0 iteration: 116 / 360 -- time = 6960.0 / 21600.0 iteration: 117 / 360 -- time = 7020.0 / 21600.0 iteration: 118 / 360 -- time = 7080.0 / 21600.0 iteration: 119 / 360 -- time = 7140.0 / 21600.0 iteration: 120 / 360 -- time = 7200.0 / 21600.0 iteration: 121 / 360 -- time = 7260.0 / 21600.0 iteration: 122 / 360 -- time = 7320.0 / 21600.0 iteration: 123 / 360 -- time = 7380.0 / 21600.0 iteration: 124 / 360 -- time = 7440.0 / 21600.0 iteration: 125 / 360 -- time = 7500.0 / 21600.0 iteration: 126 / 360 -- time = 7560.0 / 21600.0 iteration: 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-- time = 21120.0 / 21600.0 iteration: 353 / 360 -- time = 21180.0 / 21600.0 iteration: 354 / 360 -- time = 21240.0 / 21600.0 iteration: 355 / 360 -- time = 21300.0 / 21600.0 iteration: 356 / 360 -- time = 21360.0 / 21600.0 iteration: 357 / 360 -- time = 21420.0 / 21600.0 iteration: 358 / 360 -- time = 21480.0 / 21600.0 iteration: 359 / 360 -- time = 21540.0 / 21600.0 iteration: 360 / 360 -- time = 21600.0 / 21600.0 CLUBB-TIMER time_loop_init = 0.1169 CLUBB-TIMER time_clubb_advance = 3.0999 CLUBB-TIMER time_clubb_pdf = 0.0005 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 4.0362 Program exited normally Saved Output ------------ job_dir /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/cli_bomex_20260626_011157_697945_2270386 results /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/cli_bomex_20260626_011157_697945_2270386/results.json status /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/cli_bomex_20260626_011157_697945_2270386/status.json request /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/cli_bomex_20260626_011157_697945_2270386/request.json log /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/cli_bomex_20260626_011157_697945_2270386/worker.log complete_output /home/jenkins/workspace/clubb_new_tuner_test/output [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Complex Tuner Command) [Pipeline] sh + ulimit -s 8388608 + python run_scripts/run_tuner_job.py -cases arm:68400:72000:3600 bomex:7200:18000:2700 -fields cloud_frac rcm -params C8:0.2:0.8 C11:0.1:1.0 -strategy resolve:0.9 -batch_size 4 -max_workers 2 -seed 1 -loss_mode centered_rmse_bias -aggregation_mode mean_max -poll_interval 1 -output_root output_tuner/new_tuner_test/complex -run_top both -top_n 1 -run_out_dir output/new_tuner_test/complex Tuner Job --------- job_dir /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432 request /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432/request.json log /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432/worker.log Configuration cases arm 68400-72000 s, avg=3600 s, windows=1 bomex 7200-18000 s, avg=2700 s, windows=4 fields cloud_frac, rcm parameters C8 0.2 -> 0.8 C11 0.1 -> 1 run strategy resolve, spacing=0.9 estimated_samples 4 batch_size 4 max_workers 2 loss centered_rmse_bias aggregation mean_max poll_interval 1 s post_run both, top_n=1, out=/home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex Launching tuner. Press Ctrl-C once for graceful stop, twice to terminate. state: created | samples: 0 | elapsed: 00:00 | workers active/idle/init: 0/0/0 | queued cases: 0 | best: -- state: running | samples: 0/4 | elapsed: 00:00 | workers active/idle/init: 0/2/2 | queued cases: 0 | best: -- state: running | samples: 0/4 | elapsed: 00:01 | workers active/idle/init: 2/0/2 | queued cases: 0 | best: -- state: running | samples: 0/4 | elapsed: 00:02 | workers active/idle/init: 1/1/2 | queued cases: 0 | best: -- state: finished | samples: 4/4 | elapsed: 00:03 | workers active/idle/init: 0/0/0 | queued cases: 0 | best: 1.10915 (C11=1, C8=0.8) Running top 1 result(s) with params: /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/tuner_top_20260626_011212_020670_2270432_params.in + /usr/bin/python /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/run_scm_loss.py -out_dir /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/window -fields cloud_frac,rcm -cases arm,bomex -params /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/tuner_top_20260626_011212_020670_2270432_params.in -case_config_file /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432/request.json - using executable: /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/../install/latest/clubb_standalone_loss - normalized benchmark: /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/window/arm_normalized_benchmark.nc - loss timing: absolute_window=[68400, 72000] s, model_time_initial=41400 s, model_time_final=72000 s, stats_tstart=68400 s, stats_tend=72000 s, stats_tsamp=60 s, stats_tout=3600 s, num_time_windows=1 =================== Running arm loss =================== benchmark timing:window 1 records 451 510 absolute_window 68400 72000 benchmark_window 68400.000000000000 72000.000000000000 matched_window 68460.000000000000 72000.000000000000 closing 131072 CLUBB-TIMER time_loop_init = 0.0164 CLUBB-TIMER time_clubb_advance = 0.9234 CLUBB-TIMER time_clubb_pdf = 0.0007 CLUBB-TIMER time_SILHS = 0.0004 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.9441 variable scaled_rmse_col1 corr_col1 std_ratio_col1 crmse_norm_col1 bias_norm_col1 best_col cloud_frac 3.40631402E+00 8.45693866E-01 6.23883376E-01 5.77928870E-01 -2.97742736E-01 col1 rcm 1.04443001E+01 6.41641686E-01 4.79339760E-01 7.83988433E-01 -4.27826769E-01 col1 - normalized benchmark: /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/window/bomex_normalized_benchmark.nc - loss timing: absolute_window=[7200, 18000] s, model_time_initial=0 s, model_time_final=18000 s, stats_tstart=7200 s, stats_tend=18000 s, stats_tsamp=60 s, stats_tout=2700 s, num_time_windows=4 =================== Running bomex loss =================== benchmark timing:window 1 records 121 165 absolute_window 7200 9900 benchmark_window 7200.0000000000000 9900.0000000000000 matched_window 7260.0000000000000 9900.0000000000000 benchmark timing:window 2 records 166 210 absolute_window 9900 12600 benchmark_window 9900.0000000000000 12600.000000000000 matched_window 9960.0000000000000 12600.000000000000 benchmark timing:window 3 records 211 255 absolute_window 12600 15300 benchmark_window 12600.000000000000 15300.000000000000 matched_window 12660.000000000000 15300.000000000000 benchmark timing:window 4 records 256 300 absolute_window 15300 18000 benchmark_window 15300.000000000000 18000.000000000000 matched_window 15360.000000000000 18000.000000000000 closing 131072 CLUBB-TIMER time_loop_init = 0.0041 CLUBB-TIMER time_clubb_advance = 0.2602 CLUBB-TIMER time_clubb_pdf = 0.0002 CLUBB-TIMER time_SILHS = 0.0001 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.2672 CLUBB-TIMER time_loop_init = 0.0012 CLUBB-TIMER time_clubb_advance = 0.1232 CLUBB-TIMER time_clubb_pdf = 0.0001 CLUBB-TIMER time_SILHS = 0.0000 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.1252 CLUBB-TIMER time_loop_init = 0.0012 CLUBB-TIMER time_clubb_advance = 0.1234 CLUBB-TIMER time_clubb_pdf = 0.0001 CLUBB-TIMER time_SILHS = 0.0000 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.1254 CLUBB-TIMER time_loop_init = 0.0012 CLUBB-TIMER time_clubb_advance = 0.1231 CLUBB-TIMER time_clubb_pdf = 0.0001 CLUBB-TIMER time_SILHS = 0.0000 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 0.1252 variable window scaled_rmse_col1 corr_col1 std_ratio_col1 crmse_norm_col1 bias_norm_col1 best_col cloud_frac window1 1.14969160E+00 9.37561209E-01 6.79524415E-01 4.33084249E-01 -2.77543147E-01 col1 rcm window1 6.84178199E+00 7.78145471E-01 6.42408522E-01 6.42583959E-01 -4.64005854E-01 col1 cloud_frac window2 1.00047165E+00 9.44134830E-01 7.04255305E-01 4.07616988E-01 -2.64189865E-01 col1 rcm window2 7.21673235E+00 7.93727221E-01 6.37162678E-01 6.28099956E-01 -4.72921059E-01 col1 cloud_frac window3 1.12083169E+00 9.03256656E-01 7.85179150E-01 4.45050235E-01 -2.72111006E-01 col1 rcm window3 1.14258429E+01 6.10707591E-01 5.92800322E-01 7.92058652E-01 -5.59401413E-01 col1 cloud_frac window4 1.00626706E+00 9.34411287E-01 7.32725182E-01 4.09332178E-01 -2.77510724E-01 col1 rcm window4 9.58507324E+00 7.58539431E-01 6.08909655E-01 6.68585822E-01 -5.35743230E-01 col1 + /usr/bin/python /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/run_scm.py -out_dir /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/complete -params /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/tuner_top_20260626_011212_020670_2270432_params.in arm /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/complete/arm.in - using executable: /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/../install/latest/clubb_standalone =================== Running arm =================== 2026/06/26 01:12:14 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 = 1.00000000000000000000 C1b = 1.00000000000000000000 C1c = 1.00000000000000000000 C2rt = 2.00000000000000000000 C2thl = 2.00000000000000000000 C2rtthl = 2.00000000000000000000 C4 = 2.00000000000000000000 C_uu_shr = 0.40000000000000002220 C_uu_buoy = 0.29999999999999998890 C6rt = 2.00000000000000000000 C6rtb = 2.00000000000000000000 C6rtc = 1.00000000000000000000 C6thl = 2.00000000000000000000 C6thlb = 2.00000000000000000000 C6thlc = 1.00000000000000000000 C7 = 0.50000000000000000000 C7b = 0.50000000000000000000 C7c = 0.50000000000000000000 C8 = 0.80000000000000004441 C8b = 0.02000000000000000042 C10 = 3.29999999999999982236 C11 = 1.00000000000000000000 C11b = 0.40000000000000002220 C11c = 0.50000000000000000000 C12 = 1.00000000000000000000 C13 = 0.10000000000000000555 C14 = 1.00000000000000000000 C_wp2_pr_dfsn = 0.00000000000000000000 C_wp3_pr_tp = 0.00000000000000000000 C_wp3_pr_turb = 1.00000000000000000000 C_wp3_pr_dfsn = 0.00000000000000000000 C_wp2_splat = 0.00000000000000000000 C6rt_Lscale0 = 14.00000000000000000000 C6thl_Lscale0 = 14.00000000000000000000 C7_Lscale0 = 0.84999999999999997780 wpxp_L_thresh = 60.00000000000000000000 c_K = 0.20000000000000001110 c_K1 = 0.20000000000000001110 nu1 = 20.00000000000000000000 c_K2 = 0.02500000000000000139 nu2 = 1.00000000000000000000 c_K6 = 0.37500000000000000000 nu6 = 5.00000000000000000000 c_K8 = 5.00000000000000000000 nu8 = 20.00000000000000000000 c_K9 = 0.10000000000000000555 nu9 = 10.00000000000000000000 nu10 = 0.00000000000000000000 c_K_hm = 0.75000000000000000000 c_K_hmb = 0.75000000000000000000 K_hm_min_coef = 0.10000000000000000555 nu_hm = 1.50000000000000000000 slope_coef_spread_DG_means_w = 21.00000000000000000000 pdf_component_stdev_factor_w = 1.00000000000000000000 coef_spread_DG_means_rt = 0.80000000000000004441 coef_spread_DG_means_thl = 0.80000000000000004441 gamma_coef = 0.25000000000000000000 gamma_coefb = 0.25000000000000000000 gamma_coefc = 5.00000000000000000000 mu = 0.00100000000000000002 beta = 1.00000000000000000000 lmin_coef = 0.50000000000000000000 omicron = 0.50000000000000000000 zeta_vrnce_rat = 0.00000000000000000000 upsilon_precip_frac_rat = 0.55000000000000004441 lambda0_stability_coef = 0.02999999999999999889 mult_coef = 0.50000000000000000000 taumin = 90.00000000000000000000 taumax = 3600.00000000000000000000 Lscale_mu_coef = 2.00000000000000000000 Lscale_pert_coef = 0.10000000000000000555 alpha_corr = 0.14999999999999999445 Skw_denom_coef = 4.00000000000000000000 c_K10 = 1.00000000000000000000 c_K10h = 1.00000000000000000000 thlp2_rad_coef = 1.00000000000000000000 thlp2_rad_cloud_frac_thresh = 0.10000000000000000555 up2_sfc_coef = 4.00000000000000000000 Skw_max_mag = 10.00000000000000000000 C_invrs_tau_bkgnd = 1.10000000000000008882 C_invrs_tau_sfc = 0.10000000000000000555 C_invrs_tau_shear = 0.14999999999999999445 C_invrs_tau_N2 = 0.40000000000000002220 C_invrs_tau_N2_wp2 = 0.20000000000000001110 C_invrs_tau_N2_xp2 = 0.05000000000000000278 C_invrs_tau_N2_wpxp = 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 = 1.00000000000000000000 C_invrs_tau_wpxp_Ri = 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh = 0.00033000000000000000 xp3_coef_base = 0.25000000000000000000 xp3_coef_slope = 0.01000000000000000021 altitude_threshold = 100.00000000000000000000 rtp2_clip_coef = 0.50000000000000000000 Cx_min = 0.33000000000000001554 Cx_max = 0.94999999999999995559 Richardson_num_min = 0.25000000000000000000 Richardson_num_max = 400.00000000000000000000 a3_coef_min = 1.00000000000000000000 a_const = 1.80000000000000004441 bv_efold = 5.00000000000000000000 wpxp_Ri_exp = 0.50000000000000000000 z_displace = 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DNETCDF enabled -DCOAMPS_MICRO enabled -DTUNER disabled -DSILHS enabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = arm nzmax = 110 grid_type = 1 deltaz = 40.000000000000000 zm_init = 0.0000000000000000 zm_top = 5350.0000000000000 zt_grid_fname = zm_grid_fname = day = 21 month = 6 year = 1997 lat_vals = 36.619999999999997 lon_vals = -97.500000000000000 sfc_elevation = 0.0000000000000000 time_initial = 41400.000000000000 time_final = 93600.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 1 T_sfc = 288.00000000000000 p_sfc = 97000.000000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 8.5000000000000006E-005 fcor_y = 1.1705254096712995E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = F l_modify_ic_with_cubic_int = F l_modify_bc_for_cnvg_test = F l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/arm time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/complete/ fname_prefix = arm stats_output_filename = arm_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 41400.000000000000 stats_tend = 93600.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- &microphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/arm_corr_array_cloud.in and/or ../input/case_setups/arm_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = none sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 100.00000000000000 F1 = 20.000000000000000 kappa = 119.00000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 2 penta_solve_method = 2 tridiag_solve_method = 2 grid_remap_method = 1 grid_adapt_in_time_method = 0 l_use_precip_frac = T l_predict_upwp_vpwp = T l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = T l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = F l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_tke_aniso = T l_vert_avg_closure = F l_trapezoidal_rule_zt = F l_trapezoidal_rule_zm = F l_call_pdf_closure_twice = F l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = F l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = F l_damp_wp2_using_em = T l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = T l_use_C7_Richardson = T l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = T l_damp_wp3_Skw_squared = T l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = T l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = T l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = F l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: arm_sounding.in File exists? T Path to sclr_sounding: arm_sclr_sounding.in File exists? T Path to edsclr_sounding: arm_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 50.000000000000000 350.00000000000000 650.00000000000000 700.00000000000000 1300.0000000000000 2500.0000000000000 5500.0000000000000 u = 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 v = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 ug = 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 10.000000000000000 vg = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 theta = 299.00000000000000 301.50000000000000 302.50000000000000 303.52999999999997 303.69999999999999 307.13000000000000 314.00000000000000 343.19999999999999 rt = 1.5200000000000000E-002 1.5169999999999999E-002 1.4980000000000000E-002 1.4800000000000001E-002 1.4700000000000000E-002 1.3500000000000000E-002 3.0000000000000001E-003 3.0000000000000001E-003 p_in_Pa = -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 When the l_diag_Lscale_from_tau flag is enabled, C2rt must have a value of 1. C2rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2thl must have a value of 1. C2thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rtthl must have a value of 1. C2rtthl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rt must have a value of 1. C6rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rtb must have a value of 1. C6rtb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thl must have a value of 1. C6thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thlb must have a value of 1. C6thlb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rt must have a value of 1. C2rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2thl must have a value of 1. C2thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rtthl must have a value of 1. C2rtthl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rt must have a value of 1. C6rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rtb must have a value of 1. C6rtb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thl must have a value of 1. C6thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thlb must have a value of 1. 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-- time = 92880.0 / 93600.0 iteration: 859 / 870 -- time = 92940.0 / 93600.0 iteration: 860 / 870 -- time = 93000.0 / 93600.0 iteration: 861 / 870 -- time = 93060.0 / 93600.0 iteration: 862 / 870 -- time = 93120.0 / 93600.0 iteration: 863 / 870 -- time = 93180.0 / 93600.0 iteration: 864 / 870 -- time = 93240.0 / 93600.0 iteration: 865 / 870 -- time = 93300.0 / 93600.0 iteration: 866 / 870 -- time = 93360.0 / 93600.0 iteration: 867 / 870 -- time = 93420.0 / 93600.0 iteration: 868 / 870 -- time = 93480.0 / 93600.0 iteration: 869 / 870 -- time = 93540.0 / 93600.0 iteration: 870 / 870 -- time = 93600.0 / 93600.0 CLUBB-TIMER time_loop_init = 0.4071 CLUBB-TIMER time_clubb_advance = 8.2340 CLUBB-TIMER time_clubb_pdf = 0.0013 CLUBB-TIMER time_SILHS = 0.0007 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 11.0922 Program exited normally + /usr/bin/python /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/run_scm.py -out_dir /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/complete -params /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/tuner_top_20260626_011212_020670_2270432_params.in bomex /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/complete/bomex.in - using executable: /home/jenkins/workspace/clubb_new_tuner_test/run_scripts/../install/latest/clubb_standalone =================== Running bomex =================== 2026/06/26 01:12:25 -------------------------------------------------- Latest git log entry -------------------------------------------------- A detailed git diff can be found at the end of this file -------------------------------------------------- Tunable Parameters: -------------------------------------------------- Parameter Value --------- ----- C1 = 1.00000000000000000000 C1b = 1.00000000000000000000 C1c = 1.00000000000000000000 C2rt = 2.00000000000000000000 C2thl = 2.00000000000000000000 C2rtthl = 2.00000000000000000000 C4 = 2.00000000000000000000 C_uu_shr = 0.40000000000000002220 C_uu_buoy = 0.29999999999999998890 C6rt = 2.00000000000000000000 C6rtb = 2.00000000000000000000 C6rtc = 1.00000000000000000000 C6thl = 2.00000000000000000000 C6thlb = 2.00000000000000000000 C6thlc = 1.00000000000000000000 C7 = 0.50000000000000000000 C7b = 0.50000000000000000000 C7c = 0.50000000000000000000 C8 = 0.80000000000000004441 C8b = 0.02000000000000000042 C10 = 3.29999999999999982236 C11 = 1.00000000000000000000 C11b = 0.40000000000000002220 C11c = 0.50000000000000000000 C12 = 1.00000000000000000000 C13 = 0.10000000000000000555 C14 = 1.00000000000000000000 C_wp2_pr_dfsn = 0.00000000000000000000 C_wp3_pr_tp = 0.00000000000000000000 C_wp3_pr_turb = 1.00000000000000000000 C_wp3_pr_dfsn = 0.00000000000000000000 C_wp2_splat = 0.00000000000000000000 C6rt_Lscale0 = 14.00000000000000000000 C6thl_Lscale0 = 14.00000000000000000000 C7_Lscale0 = 0.84999999999999997780 wpxp_L_thresh = 60.00000000000000000000 c_K = 0.20000000000000001110 c_K1 = 0.20000000000000001110 nu1 = 20.00000000000000000000 c_K2 = 0.02500000000000000139 nu2 = 1.00000000000000000000 c_K6 = 0.37500000000000000000 nu6 = 5.00000000000000000000 c_K8 = 5.00000000000000000000 nu8 = 20.00000000000000000000 c_K9 = 0.10000000000000000555 nu9 = 10.00000000000000000000 nu10 = 0.00000000000000000000 c_K_hm = 0.75000000000000000000 c_K_hmb = 0.75000000000000000000 K_hm_min_coef = 0.10000000000000000555 nu_hm = 1.50000000000000000000 slope_coef_spread_DG_means_w = 21.00000000000000000000 pdf_component_stdev_factor_w = 1.00000000000000000000 coef_spread_DG_means_rt = 0.80000000000000004441 coef_spread_DG_means_thl = 0.80000000000000004441 gamma_coef = 0.25000000000000000000 gamma_coefb = 0.25000000000000000000 gamma_coefc = 5.00000000000000000000 mu = 0.00100000000000000002 beta = 1.00000000000000000000 lmin_coef = 0.50000000000000000000 omicron = 0.50000000000000000000 zeta_vrnce_rat = 0.00000000000000000000 upsilon_precip_frac_rat = 0.55000000000000004441 lambda0_stability_coef = 0.02999999999999999889 mult_coef = 0.50000000000000000000 taumin = 90.00000000000000000000 taumax = 3600.00000000000000000000 Lscale_mu_coef = 2.00000000000000000000 Lscale_pert_coef = 0.10000000000000000555 alpha_corr = 0.14999999999999999445 Skw_denom_coef = 4.00000000000000000000 c_K10 = 1.00000000000000000000 c_K10h = 1.00000000000000000000 thlp2_rad_coef = 1.00000000000000000000 thlp2_rad_cloud_frac_thresh = 0.10000000000000000555 up2_sfc_coef = 4.00000000000000000000 Skw_max_mag = 10.00000000000000000000 C_invrs_tau_bkgnd = 1.10000000000000008882 C_invrs_tau_sfc = 0.10000000000000000555 C_invrs_tau_shear = 0.14999999999999999445 C_invrs_tau_N2 = 0.40000000000000002220 C_invrs_tau_N2_wp2 = 0.20000000000000001110 C_invrs_tau_N2_xp2 = 0.05000000000000000278 C_invrs_tau_N2_wpxp = 0.00000000000000000000 C_invrs_tau_N2_clear_wp3 = 1.00000000000000000000 C_invrs_tau_wpxp_Ri = 0.34999999999999997780 C_invrs_tau_wpxp_N2_thresh = 0.00033000000000000000 xp3_coef_base = 0.25000000000000000000 xp3_coef_slope = 0.01000000000000000021 altitude_threshold = 100.00000000000000000000 rtp2_clip_coef = 0.50000000000000000000 Cx_min = 0.33000000000000001554 Cx_max = 0.94999999999999995559 Richardson_num_min = 0.25000000000000000000 Richardson_num_max = 400.00000000000000000000 a3_coef_min = 1.00000000000000000000 a_const = 1.80000000000000004441 bv_efold = 5.00000000000000000000 wpxp_Ri_exp = 0.50000000000000000000 z_displace = 25.00000000000000000000 -------------------------------------------------- Preprocessing Directives: -------------------------------------------------- -DNETCDF enabled -DCOAMPS_MICRO enabled -DTUNER disabled -DSILHS enabled -Dnooverlap enabled -Draoffline enabled -DUSE_BUGSrad_ocast_random disabled -------------------------------------------------- &model_setting -------------------------------------------------- runtype = bomex nzmax = 75 grid_type = 1 deltaz = 40.000000000000000 zm_init = 0.0000000000000000 zm_top = 3500.0000000000000 zt_grid_fname = zm_grid_fname = day = 22 month = 6 year = 1969 lat_vals = 15.000000000000000 lon_vals = -56.500000000000000 sfc_elevation = 0.0000000000000000 time_initial = 0.0000000000000000 time_final = 21600.000000000000 dt_main = 60.000000000000000 dt_rad = 60.000000000000000 sfctype = 0 T_sfc = 288.00000000000000 p_sfc = 101500.00000000000 sens_ht = 0.0000000000000000 latent_ht = 0.0000000000000000 fcor = 3.7599999999999999E-005 fcor_y = 1.4087062250470739E-004 T0 = 300.00000000000000 ts_nudge = 86400.000000000000 forcings_file_path = l_t_dependent = T l_ignore_forcings = T l_modify_ic_with_cubic_int = T l_modify_bc_for_cnvg_test = T l_input_xpwp_sfc = F saturation_formula = 3 thlm_sponge_damp_settings%l_sponge_damping = F rtm_sponge_damp_settings%l_sponge_damping = F uv_sponge_damp_settings%l_sponge_damping = F wp2_sponge_damp_settings%l_sponge_damping = F wp3_sponge_damp_settings%l_sponge_damping = F up2_vp2_sponge_damp_settings%l_sponge_damping = F thlm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 thlm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 rtm_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 uv_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 uv_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 uv_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 wp3_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.000000000000000 up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.0000000000000 up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.25000000000000000 l_soil_veg = F l_restart = F l_input_fields = F restart_path_case = restart/bomex time_restart = 0.0000000000000000 debug_level = 2 sclr_dim = 0 edsclr_dim = 0 iisclr_thl = -2 iisclr_rt = -1 iisclr_CO2 = -1 sclr_tol = -------------------------------------------------- &stats_setting -------------------------------------------------- l_stats = T output_dir = /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/complete/ fname_prefix = bomex stats_output_filename = bomex_stats.nc stats_tsamp = 60.000000000000000 stats_tout = 60.000000000000000 stats_tstart = 0.0000000000000000 stats_tend = 21600.000000000000 l_allow_small_stats_tout = F Constant flags: l_pos_def = F l_gamma_Skw = T Constant tolerances [units] rt_tol [kg/kg] = 1.0000000000000000E-008 thl_tol [K] = 1.0000000000000000E-002 w_tol [m/s] = 2.0000000000000000E-002 -------------------------------------------------- &microphysics_setting -------------------------------------------------- microphys_scheme = none l_cloud_sed = F sigma_g = 1.5000000000000000 l_graupel = F l_hail = F l_seifert_beheng = F l_predict_Nc = F l_const_Nc_in_cloud = F specify_aerosol = morrison_lognormal l_subgrid_w = T l_arctic_nucl = F l_cloud_edge_activation = F l_fix_pgam = F l_in_cloud_Nc_diff = T l_var_covar_src = F l_upwind_diff_sed = F lh_microphys_type = disabled lh_num_samples = 2 lh_sequence_length = 1 lh_seed = 5489 l_fix_w_chi_eta_correlations = T l_silhs_KK_convergence_adj_mean = F importance_prob_thresh = 1.0000000000000000E-008 host_dx = 1000000.0000000000 host_dy = 1000000.0000000000 hmp2_ip_on_hmm2_ip_slope%rr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%ri = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rs = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%rg = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Nr = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ni = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_slope%Ng = 2.1200000000000000E-005 hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.54000000000000004 hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.54000000000000004 Ncnp2_on_Ncnm2 = 1.0000000000000000 C_evap = 0.85999999999999999 r_0 = 2.5000000000000001E-005 microphys_start_time = 0.0000000000000000 Nc0_in_cloud = 100000000.00000000 ccnconst = 120.00000000000000 ccnexpnt = 0.40000000596046448 aer_rm1 = 1.1000000021965661E-008 aer_rm2 = 5.9999997858994902E-008 aer_n1 = 125000000.00000000 aer_n2 = 65000000.000000000 aer_sig1 = 1.2000000476837158 aer_sig2 = 1.7000000476837158 pgam_fixed = 5.0000000000000000 precip_frac_calc_type = 2 -------------------------------------------------- &SILHS_setting -------------------------------------------------- Warning: missing correlation input file(s): ../input/case_setups/bomex_corr_array_cloud.in and/or ../input/case_setups/bomex_corr_array_below.in The default correlation arrays will be used. -------------------------------------------------- &radiation_setting -------------------------------------------------- rad_scheme = simplified_bomex sol_const = 1367.0000000000000 alvdr = 0.10000000000000001 alvdf = 0.10000000000000001 alndr = 0.10000000000000001 alndf = 0.10000000000000001 radiation_top = 50000.000000000000 F0 = 100.00000000000000 F1 = 20.000000000000000 kappa = 119.00000000000000 gc = 0.85999999999999999 omega = 0.99650000000000005 slr = 1.0000000000000000 l_rad_above_cloud = F l_sw_radiation = F l_fix_cos_solar_zen = F l_use_default_std_atmosphere = T Fs_values = 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 cos_solar_zen_values = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 cos_solar_zen_times = -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 -999.00000000000000 eff_drop_radius = 1.0000000000000001E-005 -------------------------------------------------- &configurable_clubb_flags_nl -------------------------------------------------- iiPDF_type = 1 ipdf_call_placement = 2 penta_solve_method = 2 tridiag_solve_method = 2 grid_remap_method = 1 grid_adapt_in_time_method = 0 l_use_precip_frac = T l_predict_upwp_vpwp = T l_ho_nontrad_coriolis = F l_ho_trad_coriolis = F l_min_wp2_from_corr_wx = F l_min_xp2_from_corr_wx = T l_C2_cloud_frac = F l_diffuse_rtm_and_thlm = F l_stability_correct_Kh_N2_zm = F l_calc_thlp2_rad = T l_upwind_xpyp_ta = T l_upwind_xm_ma = T l_uv_nudge = F l_rtm_nudge = F l_tke_aniso = T l_vert_avg_closure = F l_trapezoidal_rule_zt = F l_trapezoidal_rule_zm = F l_call_pdf_closure_twice = F l_standard_term_ta = F l_partial_upwind_wp3 = F l_godunov_upwind_wpxp_ta = F l_godunov_upwind_xpyp_ta = F l_use_cloud_cover = F l_diagnose_correlations = F l_calc_w_corr = F l_const_Nc_in_cloud = F l_fix_w_chi_eta_correlations = T l_stability_correct_tau_zm = F l_damp_wp2_using_em = T l_do_expldiff_rtm_thlm = F l_Lscale_plume_centered = F l_diag_Lscale_from_tau = T l_use_C7_Richardson = T l_use_C11_Richardson = F l_use_shear_Richardson = F l_brunt_vaisala_freq_moist = F l_use_thvm_in_bv_freq = F l_rcm_supersat_adj = T l_damp_wp3_Skw_squared = T l_prescribed_avg_deltaz = F l_lmm_stepping = F l_e3sm_config = F l_vary_convect_depth = F l_use_tke_in_wp3_pr_turb_term = T l_use_tke_in_wp2_wp3_K_dfsn = F l_use_wp3_lim_with_smth_Heaviside = F l_smooth_Heaviside_tau_wpxp = T l_modify_limiters_for_cnvg_test = F l_enable_relaxed_clipping = F l_linearize_pbl_winds = F l_mono_flux_lim_thlm = T l_mono_flux_lim_rtm = T l_mono_flux_lim_um = T l_mono_flux_lim_vm = T l_mono_flux_lim_spikefix = T l_host_applies_sfc_fluxes = F l_wp2_fill_holes_tke = T l_add_dycore_grid = F -------------------------------------------------- git diff src/ -------------------------------------------------- See *setup.txt file in output folder Path to sounding: bomex_sounding.in File exists? T Path to sclr_sounding: bomex_sclr_sounding.in File exists? T Path to edsclr_sounding: bomex_edsclr_sounding.in File exists? T Reading in sounding information z = 0.0000000000000000 100.00000000000000 200.00000000000000 300.00000000000000 400.00000000000000 500.00000000000000 520.00000000000000 600.00000000000000 700.00000000000000 800.00000000000000 900.00000000000000 1000.0000000000000 1100.0000000000000 1200.0000000000000 1300.0000000000000 1400.0000000000000 1480.0000000000000 1500.0000000000000 1600.0000000000000 1700.0000000000000 1800.0000000000000 1900.0000000000000 2000.0000000000000 2099.9000000000001 2100.0000000000000 2200.0000000000000 2300.0000000000000 2400.0000000000000 2500.0000000000000 2600.0000000000000 2700.0000000000000 2800.0000000000000 2900.0000000000000 3000.0000000000000 3100.0000000000000 3200.0000000000000 3300.0000000000000 3400.0000000000000 3500.0000000000000 u = -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.7500000000000000 -8.5700000000000003 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-999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 -999.89999999999998 subs = 0.0000000000000000 -4.3333331081081084E-004 -8.6666662162162168E-004 -1.2999999324324325E-003 -1.7333332432432434E-003 -2.1666665540540542E-003 -2.2533332162162165E-003 -2.5999998648648650E-003 -3.0333331756756759E-003 -3.4666664864864867E-003 -3.8999997972972975E-003 -4.3333331081081084E-003 -4.7666664189189188E-003 -5.1999997297297301E-003 -5.6333330405405405E-003 -6.0666663513513517E-003 -6.4133330000000002E-003 -6.4999999999999997E-003 -5.4166666111018502E-003 -4.3333332222037007E-003 -3.2499998333055508E-003 -2.1666664444074018E-003 -1.0833330555092523E-003 -1.0829999999998133E-006 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 When the l_diag_Lscale_from_tau flag is enabled, C2rt must have a value of 1. C2rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2thl must have a value of 1. C2thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rtthl must have a value of 1. C2rtthl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rt must have a value of 1. C6rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rtb must have a value of 1. C6rtb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thl must have a value of 1. C6thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thlb must have a value of 1. C6thlb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rt must have a value of 1. C2rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2thl must have a value of 1. C2thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C2rtthl must have a value of 1. C2rtthl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rt must have a value of 1. C6rt = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6rtb must have a value of 1. C6rtb = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thl must have a value of 1. C6thl = 2.0000000000000000 Warning in check_clubb_settings_api When the l_diag_Lscale_from_tau flag is enabled, C6thlb must have a value of 1. 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-- time = 21120.0 / 21600.0 iteration: 353 / 360 -- time = 21180.0 / 21600.0 iteration: 354 / 360 -- time = 21240.0 / 21600.0 iteration: 355 / 360 -- time = 21300.0 / 21600.0 iteration: 356 / 360 -- time = 21360.0 / 21600.0 iteration: 357 / 360 -- time = 21420.0 / 21600.0 iteration: 358 / 360 -- time = 21480.0 / 21600.0 iteration: 359 / 360 -- time = 21540.0 / 21600.0 iteration: 360 / 360 -- time = 21600.0 / 21600.0 CLUBB-TIMER time_loop_init = 0.1112 CLUBB-TIMER time_clubb_advance = 3.1025 CLUBB-TIMER time_clubb_pdf = 0.0006 CLUBB-TIMER time_SILHS = 0.0003 CLUBB-TIMER time_microphys_scheme = 0.0000 CLUBB-TIMER time_microphys_advance = 0.0000 CLUBB-TIMER time_loop_end = 0.0000 CLUBB-TIMER time_adapt_grid = 0.0000 CLUBB-TIMER time_total = 4.0302 Program exited normally Saved Output ------------ job_dir /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432 results /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432/results.json status /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432/status.json request /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432/request.json log /home/jenkins/workspace/clubb_new_tuner_test/output_tuner/new_tuner_test/complex/cli_arm_bomex_20260626_011207_984933_2270432/worker.log window_output /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/window complete_output /home/jenkins/workspace/clubb_new_tuner_test/output/new_tuner_test/complex/complete [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS