http://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_gpu_async_output_matching/clubb_gpu_async_output_matchingclubb_gpu_async_output_matchingclubb_gpu_async_output_matchingclubb_gpu_async_output_matchinghttp://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/trueStarted by an SCM change37900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/master900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/master900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3722183242366725clubb_gpu_async_output_matching #3737false378063SUCCESS1788683289552http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/37/src/Microphys/KK_microphys/CMakeLists.txtsrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90src/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90src/Microphys/KK_microphys_module.F90src/SILHS/CMakeLists.txtsrc/CLUBB_core/stats_netcdf.F90src/Microphys/pdf_hydromet_microphys_wrapper.F90src/Microphys/advance_microphys_module.F90src/Microphys/lh_microphys_driver_module.F90src/Microphys/KK_microphys/KK_upscaled_covariances.F90src/Microphys/ice_dfsn_module.F90src/SILHS/est_kessler_microphys_module.F90src/Microphys/microphys_interface.incsrc/Microphys/cloud_sed_module.F90src/CLUBB_core/stats_clubb_utilities.F90src/SILHS/math_utilities.F90src/Microphys/estimate_scm_microphys_module.F90src/Microphys/CMakeLists.txtsrc/Microphys/Morrison_microphys/CMakeLists.txtsrc/SILHS/silhs_api_module.F90src/Microphys/mixed_moment_PDF_integrals.F90src/SILHS/latin_hypercube_driver_module.F90tests/run_silhs_test.pysrc/Microphys/morrison_microphys_module.F90src/Microphys/gfdl_activation.F90src/CLUBB_core/advance_xp2_xpyp_module.F90src/SILHS/lh_microphys_var_covar_module.F90src/clubb_driver.F90src/Microphys/silhs_category_variance_module.F90src/CLUBB_core/fill_holes.F90src/Microphys/microphys_driver.F90src/Radiation/radiation_module.F90src/Microphys/Microphys_utils/CMakeLists.txt900681c91bdbdf8d6cd069bab01663ebac1a32791788666832000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMicrophys loop push (#1355) * First set of loop pushes - feature addition to stats too to allow for calling stats_update multiple times in a timestep and averaging the results, which is quite nice for silhs and allows us to get rid of the special microphysics stats type * More loop pushes * Tiny changes to restore BFBness * Pushing loop into advance_microphys * Little more loop push * More basic loop pushing * More loop pushing, also found what seems to be a bug with additional columns, theres code that uses only the first one. Im leaving this in for now to maintain BFBness, but labeled the problem areas with TODOs * Potentially final batch of loop pushes * Adding acc fixes for microphys stuff - the 2D versions called are GPUized, so they need acc data statements surrounding them * Removing unneccesary single col versions of lots of things * Restoring some comments and formatting * A little more restoration, maybe unnecceary 2026-09-05 22:53:52 -0500900681c91bdbdf8d6cd069bab01663ebac1a3279Microphys loop push 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JAX (#1351) * Testing new porting shortcut by creating a jax version of advance_xm_wpxp.py - it wen't well. Also updating the porting shortcut with more tips. * Small update to porting shortcut * Iterative improvements to porting shortcut * Using porting script to port advance_xp2_xpyp in one go - still some issues that seems to require rerunning to fix issues, which is sad but maybe the best we can do with such a simple method * Little bug fixes * Updates to make the ports create better jax in the sense that it is more jit-ready * Adding a more general plan to also use CLUBB-JAX and using it on advance_xm_wpxp * Cleanup * More properly jax-izing the current jax ports * More formatting of ported jax code * More formatting of ported jax code * Updates in pursuit of full jit-compatibility * Adding jit compile test * Fully jitting advance_xp2_xpyp * Copying parameter_indices from CLUBB-JAX but subtracting 1 to avoid -1 in code * Little update to port shortcut * Jitting and formatting CLUBB-JAX * Mostly formatting * Updating jax code * Improving stats outputting * Compile mono flux range loops with JAX * Improvement to jax mixing length port * Organizing stats code * Making jax work on GPU * Improvements to prescribe forcings code * Mainly prescribe forcings formatting work * Small improvements, getting rid of unneccesary weird jit statement * Radiation porting completed. Bugsrad and silhs radiation were intentionally left out for now. * Removing stale code and adding a proposal.md file detailing a potential future feature to make the python_api work with current jax code * Proper port of model flags and parameters and constants and such - those there were all kinda put into one file before * new jenkinsfile added * Tiny cleanup and adding back some stats outputs for microphysics that we need for some reason * limited to only one process. Find out built time * made jenkins jax tests faster by running them not so extensively * Mainly working on README, also some other tiny things: changing default test stats list to standard instead of all_stats, and renaming run_jax.sh to run_jax_wrapper.sh --------- Co-authored-by: Daniel Ebel <debel@uwm.edu> 2026-09-02 13:15:01 -050053920ce2095c4b721f59936d5933dd6da8bcb590Clubb JAX 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by an SCM change352cd63f391364ece6bd63ccffa31f7c4b421ee5312cd63f391364ece6bd63ccffa31f7c4b421ee531refs/remotes/origin/master2cd63f391364ece6bd63ccffa31f7c4b421ee5312cd63f391364ece6bd63ccffa31f7c4b421ee531refs/remotes/origin/master2cd63f391364ece6bd63ccffa31f7c4b421ee5312cd63f391364ece6bd63ccffa31f7c4b421ee531refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3517164222366725clubb_gpu_async_output_matching #3535false357819SUCCESS1787992086097http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/35/jenkins_tests/run_bindiff_w_varying_flags_against_master/Jenkinsfile2cd63f391364ece6bd63ccffa31f7c4b421ee5311787963911000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduAdding -debug to branch vs master bindiff test, this is to turn off compiler optimizations that can cause innocent changes to cause tiny differences 2026-08-28 19:38:31 -05002cd63f391364ece6bd63ccffa31f7c4b421ee531Adding -debug to branch vs master bindiff test, this is to turn off compiler optimizations that can cause innocent changes to cause tiny differenceseditjenkins_tests/run_bindiff_w_varying_flags_against_master/Jenkinsfilegithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse36http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/36/34http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/34/Started by an SCM change343a5ea18d3acadfec92c6af657031dddb5c1cb6623a5ea18d3acadfec92c6af657031dddb5c1cb662refs/remotes/origin/master3a5ea18d3acadfec92c6af657031dddb5c1cb6623a5ea18d3acadfec92c6af657031dddb5c1cb662refs/remotes/origin/master3a5ea18d3acadfec92c6af657031dddb5c1cb6623a5ea18d3acadfec92c6af657031dddb5c1cb662refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3445942082366725clubb_gpu_async_output_matching #3434false347738SUCCESS1787819286674http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/34/run_scripts/run_scm_all.py3a5ea18d3acadfec92c6af657031dddb5c1cb6621787754687000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduAttempted fix for Jenkins clubb_BFB_gfortran_test to include "bomex_5day_4scam" (#1349) 2026-08-26 09:31:27 -05003a5ea18d3acadfec92c6af657031dddb5c1cb662Attempted fix for Jenkins clubb_BFB_gfortran_test to include "bomex_5day_4scam" (#1349)editrun_scripts/run_scm_all.pygithttp://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockfalse35http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/35/33http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/33/Started by an SCM change33639e840b79fd413417d16751d1556da5ebc0e5e0639e840b79fd413417d16751d1556da5ebc0e5e0refs/remotes/origin/master639e840b79fd413417d16751d1556da5ebc0e5e0639e840b79fd413417d16751d1556da5ebc0e5e0refs/remotes/origin/master639e840b79fd413417d16751d1556da5ebc0e5e0639e840b79fd413417d16751d1556da5ebc0e5e0refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3326551502366725clubb_gpu_async_output_matching #3333false337662SUCCESS1787732886893http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/33/run_scripts/run_scm_all.py49b28e58b3463c7c376bc4a49c6ba92b13c387391787681276000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduAdding 'bomex_5day_4scam' to MIN_CASES for Jenkins clubb_BFB_gfortran_test. This is BIT_CHANGING. 2026-08-25 13:07:56 -050049b28e58b3463c7c376bc4a49c6ba92b13c38739Adding 'bomex_5day_4scam' to MIN_CASES for Jenkins clubb_BFB_gfortran_test. This is BIT_CHANGING.editrun_scripts/run_scm_all.pyrun_scripts/run_scm_all.py313fc4213b88e04bcd664f3155adb4fbaa04a3f11787685286000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduAdded blank line in order to run Jenkins test 2026-08-25 14:14:46 -0500313fc4213b88e04bcd664f3155adb4fbaa04a3f1Added blank line in order to run Jenkins testeditrun_scripts/run_scm_all.pyrun_scripts/run_scm_all.py55a6f491250c667eb115fb97202275c81c6a5cdd1787692415000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comAdd blank line in order to trigger Jenkins tests 2026-08-25 16:13:35 -050055a6f491250c667eb115fb97202275c81c6a5cddAdd blank line in order to trigger Jenkins testseditrun_scripts/run_scm_all.pysrc/Benchmark_cases/time_dependent_input.F90639e840b79fd413417d16751d1556da5ebc0e5e01787697926000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduBug fix: the i in rho is the column dimension, not time dimension. Since this fixes a bug, it is technically BIT_CHANGING 2026-08-25 17:45:26 -0500639e840b79fd413417d16751d1556da5ebc0e5e0Bug fix: the i in rho is the column dimension, not time dimension. Since this fixes a bug, it is technically BIT_CHANGINGeditsrc/Benchmark_cases/time_dependent_input.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhttp://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockfalse34http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/34/32http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/32/Started by an SCM change32b2993e0082ef3958bb215698697b34655a20b1afb2993e0082ef3958bb215698697b34655a20b1afrefs/remotes/origin/masterb2993e0082ef3958bb215698697b34655a20b1afb2993e0082ef3958bb215698697b34655a20b1afrefs/remotes/origin/masterb2993e0082ef3958bb215698697b34655a20b1afb2993e0082ef3958bb215698697b34655a20b1afrefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3237445022366725clubb_gpu_async_output_matching #3232false327568SUCCESS1787646486867http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/32/clubb_python_api/clubb_f2py.pyfclubb_python_api/clubb_python/prescribe_forcings.pyclubb_python_api/f2py_fortran_wrappers/prescribe_forcings_module_wrapper.F90clubb_python_driver/advance_clubb_to_end.pyd7fa9a72d2b8d10690060876afe44fd1c96771311787602115000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comFixed clubb python (#1346) - Necessary changes to get 'clubb_python_test_branch' jenkins test to pass 2026-08-24 15:08:35 -0500d7fa9a72d2b8d10690060876afe44fd1c9677131Fixed clubb python (#1346)editclubb_python_api/f2py_fortran_wrappers/prescribe_forcings_module_wrapper.F90editclubb_python_driver/advance_clubb_to_end.pyeditclubb_python_api/clubb_python/prescribe_forcings.pyeditclubb_python_api/clubb_f2py.pyfsrc/CLUBB_core/advance_clubb_core_module.F90b2993e0082ef3958bb215698697b34655a20b1af1787604006000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comRemove a blank line in order to trigger nightly tests Removed unnecessary blank line at the beginning of the module. 2026-08-24 15:40:06 -0500b2993e0082ef3958bb215698697b34655a20b1afRemove a blank line in order to trigger nightly testseditsrc/CLUBB_core/advance_clubb_core_module.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse33http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/33/31http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/31/Started by an SCM change310c90d7040b1f163985b1f884eaf431e1c356cdf00c90d7040b1f163985b1f884eaf431e1c356cdf0refs/remotes/origin/master0c90d7040b1f163985b1f884eaf431e1c356cdf00c90d7040b1f163985b1f884eaf431e1c356cdf0refs/remotes/origin/master0c90d7040b1f163985b1f884eaf431e1c356cdf00c90d7040b1f163985b1f884eaf431e1c356cdf0refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3127314742366725clubb_gpu_async_output_matching #3131false317462SUCCESS1787387288671http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/31/readiopdata_core_module.F90bc3376036f8b43c5386c1b184bce90015fb8b1531630365994000http://carson.math.uwm.edu/jenkins/user/isenfireldcisenfireldcisenfireldc@gmail.comMove readiopdata_core_module.F90 to a subdirectory for use with git-subtree 2021-08-30 18:26:34 -0500bc3376036f8b43c5386c1b184bce90015fb8b153Move readiopdata_core_module.F90 to a subdirectory for use with git-subtreeaddreadiopdata_core_module.F90readiopdata_core_module.F907e7eac0320dbba47bc1ce08f1158fd9b55be22ed1787332097000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdates to readiopdata_core and corresponding calls (#178) - readiopdata can now take in w or omega * Necessary fixes and changes to work as well as be identical to clubb readiopdata_core_module 2026-08-21 12:08:17 -05007e7eac0320dbba47bc1ce08f1158fd9b55be22edUpdates to readiopdata_core and corresponding calls (#178)editreadiopdata_core_module.F90src/Benchmark_cases/arm_0003.F90input/case_setups/bomex_model.insrc/Benchmark_cases/arm_3year.F90src/Input_fields/CMakeLists.txtsrc/Input_fields/hydrostatic_module.F90input/case_setups/BOMEX_5day_4scam.ncsrc/Input_fields/input_interpret.F90clubb_python_driver/io/sounding.pysrc/Benchmark_cases/time_dependent_input.F90input/case_setups/bomex_5day_4scam_model.insrc/readiopdata_module.F90src/readiopdata_core/readiopdata_core_module.F90clubb_python_driver/clubb_case_initalization.pysrc/Benchmark_cases/bomex.F90src/clubb_driver.F90cmake/utils/CPPDefinitions.cmakeclubb_jax/io/sounding.pysrc/Benchmark_cases/sfc_flux.F90src/Input_fields/sounding.F90utilities/case_setup/sclr_sounding_conversion.F90src/Benchmark_cases/prescribe_forcings.F90clubb_jax/clubb_case_initalization.pyclubb_python_api/f2py_fortran_wrappers/prescribe_forcings_module_wrapper.F90src/Benchmark_cases/arm.F904aa411aa309abec014934f1589d435a83a9a4bec1787333459000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comBring readiopdata changes into master (#1343) * Brought changes from readiopdata2 onto modern master branch - Currently code successfully compiles but fails to run * Fixed errors, allowing for both cases to be run and plotted! - fixed variable names in .in files * Fixes, add ifdef UWM_MISC statements, and changed alt_type/theta_type * Added l_readiopdata into ALL bomex model.in files * Code improvements - Fixed source code compilation check warnings - Checked and updated parameter order - All code I changed now has intent in/out labeled on calls - Found more instances of alt_type and theta_type to be renamed in clubb_jax and clubb_python - readiopdata_core_module.F90 moved into a folder to prepare for git subtrees * Change to be identical to sam_clubb readiopdata_core_module and a fix in arm_0003 * Fix order of operations to fix cgils cases 2026-08-21 12:30:59 -05004aa411aa309abec014934f1589d435a83a9a4becBring readiopdata changes into master (#1343)addsrc/readiopdata_module.F90editsrc/Input_fields/hydrostatic_module.F90editclubb_python_api/f2py_fortran_wrappers/prescribe_forcings_module_wrapper.F90editsrc/Benchmark_cases/sfc_flux.F90editclubb_jax/io/sounding.pyeditsrc/Benchmark_cases/arm_3year.F90editsrc/Input_fields/CMakeLists.txtaddinput/case_setups/bomex_5day_4scam_model.ineditsrc/Benchmark_cases/prescribe_forcings.F90editsrc/Benchmark_cases/arm_0003.F90addinput/case_setups/BOMEX_5day_4scam.nceditinput/case_setups/bomex_model.ineditsrc/Input_fields/input_interpret.F90editcmake/utils/CPPDefinitions.cmakeeditsrc/clubb_driver.F90editclubb_jax/clubb_case_initalization.pyeditclubb_python_driver/clubb_case_initalization.pyeditclubb_python_driver/io/sounding.pyeditsrc/Input_fields/sounding.F90editutilities/case_setup/sclr_sounding_conversion.F90editsrc/Benchmark_cases/arm.F90addsrc/readiopdata_core/readiopdata_core_module.F90editsrc/Benchmark_cases/bomex.F90editsrc/Benchmark_cases/time_dependent_input.F90tests/run_silhs_test.pyutilities/create_case_namelist.pyutilities/pytests/test_create_case_namelist.pyrun_scripts/run_scm.py1f4ec8993842ad7859cefecdfab5e067b07c53fa1787333808000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduPrevious commit improved the robustness of -override option and teased out a couple bugs in tests, causing them to fail. This adds the ability to specify which namelist an override goes in if there's no associated key to replace, the failing tests can be fixed by making use of this. One test is fixed here, and the other needed a change in a BFB config hosted on the jenkins server. 2026-08-21 12:36:48 -05001f4ec8993842ad7859cefecdfab5e067b07c53faPrevious commit improved the robustness of -override option and teased out a couple bugs in tests, causing them to fail. This adds the ability to specify which namelist an override goes in if there's no associated key to replace, the failing tests can be fixed by making use of this. One test is fixed here, and the other needed a change in a BFB config hosted on the jenkins server.addutilities/pytests/test_create_case_namelist.pyeditrun_scripts/run_scm.pyedittests/run_silhs_test.pyeditutilities/create_case_namelist.pysrc/readiopdata_module.F901b17c7eb82913aa29b80cb94f5280c9a81fb162f1787335615000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving unused dependency that can cause compilation to fail - seems compiler/build system dependent 2026-08-21 13:06:55 -05001b17c7eb82913aa29b80cb94f5280c9a81fb162fRemoving unused dependency that can cause compilation to fail - seems compiler/build system dependenteditsrc/readiopdata_module.F90src/readiopdata_core/readiopdata_core_module.F90ec70668f175a08f982ca25797a9c7367f10e03d61787335778000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduRemoved readiopdata_core to prepare for git subtrees 2026-08-21 13:09:38 -0500ec70668f175a08f982ca25797a9c7367f10e03d6Removed readiopdata_core to prepare for git subtreesdeletesrc/readiopdata_core/readiopdata_core_module.F90readiopdata_core_module.F90e49f15da4a620fb2c6af3b83858ca3a692847f541787339796000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comAdd blank line to trigger gitUpdateScripts 2026-08-21 14:16:36 -0500e49f15da4a620fb2c6af3b83858ca3a692847f54Add blank line to trigger gitUpdateScriptseditreadiopdata_core_module.F901e0e2db32c6deda3a17097f6bd47ca31bed9c7491787339851000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comRemove blank line to trigger nightly tests and gitUpdateScripts 2026-08-21 14:17:31 -05001e0e2db32c6deda3a17097f6bd47ca31bed9c749Remove blank line to trigger nightly tests and gitUpdateScriptsgithttp://carson.math.uwm.edu/jenkins/user/isenfireldcisenfireldchttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhttp://carson.math.uwm.edu/jenkins/user/hancockTrevor 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Dash workflows and broker services (#1342) * Improve Dash workflows and broker services Streamline run telemetry and output-scoped admission, add build selection and pyplotgen export support, improve profile and tuning workflows, and make Tune failures column-local and recoverable. * A little cleanup * Simplification in SILHS to keep errors silent in debug=-1 mode, and removing accidental change in advance_clubb_core.F90 * Little dash fix and comment improvement * Replacing scipy usage in the adam initial point choosing with numpy * Removing l_rtm_nudge from flag set file used by run_bindiff_w_flags tests. 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profiling tab (#1340) * Adding dash time to profile code * Little fix to benchmark output 2026-08-13 19:57:10 -0500e0ffe41f4e282a8f1686d43a2d7c881327408fe1Dash profiling tab 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Hueblerhuebler@uwm.eduDash improvement to how dash+broker is managed, also adding config save button to run tab 2026-08-11 12:28:48 -0500a2e1a527c4dec20d8256987ca0f93d97b40e2515Dash improvement to how dash+broker is managed, also adding config save button to run 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Hueblerhuebler@uwm.eduLittle bug fix for new save config feature 2026-08-11 12:44:42 -0500bdb4814bde210083394109eeecd6f61abf184bb2Little bug fix for new save config featureeditdash_app/pytests/test_tunable_config_save.pyeditdash_app/assets/37_workspace_persistence.jseditdash_app/run_tab/callbacks_settings.pyeditdash_app/run_tab/layout.pytests/run_clubb_conv_test.pytests/README992b33894af364d6a4b1d73923529dde389015b91786471215000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduLittle improvement to convergence test - it makes nicer plots and reports the 4 and 8 point fitted slopes. 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Hueblerhuebler@uwm.eduMainly dash updates and a little source changes to improve parameter/flag checking. See https://github.com/larson-group/clubb/pull/1336 for details 2026-08-04 12:50:19 -05004b6a1f233bafc1d0a52abf1924d830b2391a7407Mainly dash updates and a little source changes to improve parameter/flag checking. See https://github.com/larson-group/clubb/pull/1336 for 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plot_tab/plot_types/specs.pyedittuner/taylor_metrics.pyadddoc/reports/index.jsonadddash_app/pytests/test_custom_plot.pyeditjenkins_tests/clubb_gpu_async_output_matching/Jenkinsfileedittuner/tuning_worker.pyadddash_app/shared/broker_protocol.pyadddash_app/assets/19_tutorial_equations.csseditdash_app/run_tab/tab.pyadddash_app/pytests/test_run_runtime.pyadddoc/reports/README.mdadddash_app/pytests/test_callbacks_runs.pyadddash_app/tutorial_tab/clubb_equations_demo/components.pyadddash_app/assets/17_workspace_persistence.csseditdash_app/plot_tab/callbacks_params.pyeditdash_app/requirements.txtadddash_app/pytests/test_runtime_logging.pyadddash_app/pytests/test_output_discovery.pyadddash_app/shared/netcdf.pyadddoc/reports/sam-heatmap-coloring-examples-20h30/manifest.jsoneditdash_app/run_tab/runtime.pyeditdash_app/plot_tab/plot_types/profile_plot.pyadddash_app/pytests/test_agent_plot_actions.pyeditsrc/clubb_driver.F90editsrc/CLUBB_core/advance_xp2_xpyp_module.F90addutilities/output_paths.pyeditclubb_jax/clubb_case_initalization.pyadddash_app/pytests/test_agent_tab_registry.pyaddtests/run_clubb_settings_validation_test.pyeditclubb_python_api/f2py_fortran_wrappers/stats_netcdf_wrapper.F90adddash_app/pytests/test_param_disclosures.pyaddutilities/pytests/test_output_paths.pyadddash_app/reports_tab/__init__.pyeditsrc/CLUBB_core/parameters_tunable.F90adddash_app/shared/gateway.pyadddash_app/misc_tab/mixing_length_trajectories/analysis.pyadddash_app/shared/activity.pyadddash_app/tutorial_tab/clubb_equations_demo/__init__.pyadddash_app/tutorial_tab/clubb_equations_demo/content.pyadddash_app/tutorial_tab/welcome.pyeditjenkins_tests/clubb_plot_solver_compare/Jenkinsfileaddtests/run_pytests.shedittuner/job_runtime.pyadddash_app/pytests/test_two_gaussian_model.pyeditclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyeditutilities/create_case_namelist.pyadddash_app/shared/__init__.pyeditAGENTS.mdadddash_app/services/plots.pyedittuner/sample_history.pyadddash_app/pytests/test_equations.pyadddash_app/shared/runtime_logging.pyadddash_app/pytests/test_agent_integration.pyadddoc/reports/sam-heatmap-coloring-examples-20h30/figures/raw-sam-wrt-rc-vs-rt.pngadddash_app/persistence.pyadddash_app/pytests/test_scm_override.pyeditdash_app/plot_tab/plot_types/shared.pyadddash_app/reports_tab/publisher.pyadddoc/reports/sam-heatmap-coloring-examples-20h30/report.htmladddash_app/shared/background.pyeditrun_scripts/run_scm_loss.pyadddash_app/pytests/test_misc_tab.pyeditdash_app/run_tab/callbacks_settings.pyeditdash_app/tune_tab/layout.pyadddash_app/misc_tab/sam_w_rt_neighborhood/generation.pyadddash_app/pytests/test_plot_transitions.pyeditsrc/CLUBB_core/numerical_check.F90adddash_app/assets/25_tab_misc.cssdeletedash_app/tunable_configs.pyeditdash_app/assets/31_plots_ui_resize.jsadddash_app/assets/39_dashboard_tab_scroll.jsadddash_app/reports_tab/tab.pyadddash_app/misc_tab/registry.pyeditdash_app/plot_tab/state.pyadddash_app/shared/tab_registry.pyadddash_app/pytests/test_netcdf.pyeditrun_scripts/run_scm.pyadddash_app/pytests/test_pdf_contour_plot.pyeditdash_app/plot_tab/callbacks_grid.pyaddutilities/les_chi_moments.pyadddash_app/pytests/test_persistence.pyadddash_app/assets/28_misc_mixing_length_trajectories.csseditrun_scripts/README.mdeditdash_app/tune_tab/runtime.pyadddash_app/shared/broker_client.pyadddash_app/services/jobs.pyeditdash_app/assets/12_tab_plots_theme.cssadddash_app/shared/broker.pyadddash_app/agent_integration/broker_endpoint.pyeditdash_app/tune_tab/tab.pyadddash_app/shared/provenance.pyadddash_app/agent_integration/dashboard_lifecycle.pyadddash_app/pytests/test_atlas.pyadddash_app/pytests/test_state_persistence.pyadddash_app/pytests/test_agent_tuning.pyeditdash_app/tune_tab/discovery.pyadddoc/reports/sam-heatmap-coloring-examples-20h30/generate_color_signal_examples.pyeditrun_scripts/run_tuner_job.pyadddash_app/tutorial_tab/clubb_equations.pyeditdash_app/compile_tab/callbacks.pyeditdash_app/assets/37_run_console_state.jseditclubb_python_driver/README.mdeditutilities/create_multi_col_params.pyadddoc/reports/sam-heatmap-coloring-examples-20h30/figures/raw-sam-wrt-color-signals.pngadddash_app/assets/26_tab_reports.cssadddash_app/misc_tab/__init__.pyadddash_app/pytests/test_bivariate_heatmap.pyeditdash_app/plot_tab/layout.pyeditdash_app/assets/11_tab_run_theme.csseditclubb_python_api/clubb_python/CLUBB_core/numerical_check.pyeditclubb_python_driver/clubb_case_initalization.pyadddash_app/agent_integration/endpoint.pyaddtuner/presets.jsonaddutilities/clubb_settings_validation.pyeditdash_app/assets/34_run_param_clientside.jseditdash_app/plot_tab/callbacks_case.pyadddash_app/assets/22_tab_misc_labs.cssaddutilities/pytests/test_clubb_settings_resolution.pyeditclubb_python_api/clubb_python/clubb_api.pyadddash_app/tutorial_tab/clubb_equations_demo/app.pyadddash_app/pytests/test_reports_tab.pydeletedash_app/compile_tab/test_compile_tab_build_status.pyadddash_app/agent_integration/__init__.pyadddash_app/shared/actions.pyadddash_app/misc_tab/mixing_length_trajectories/__init__.pyedit.gitignoregithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse26http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/26/24http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/24/Started by an SCM change24034f61908b84f2574a06cc7da3db70d50696e69d034f61908b84f2574a06cc7da3db70d50696e69drefs/remotes/origin/master034f61908b84f2574a06cc7da3db70d50696e69d034f61908b84f2574a06cc7da3db70d50696e69drefs/remotes/origin/master034f61908b84f2574a06cc7da3db70d50696e69d034f61908b84f2574a06cc7da3db70d50696e69drefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#2446104072366725clubb_gpu_async_output_matching #2424false246715SUCCESS1785313686348http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/24/READMEc15480a71ed50936412eb66827a86bf69c490a371785258857000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRecently a commit removed the l_tke_aniso flag, which is BFB unless that flag is enabled. That flag was used in the clubb_BFB_varying_flags_gfortran_test, causing it to fail even though we don't care since it only failed for a removed flag, so RESOLVED:8ab3902e812c2883976b4f1f57c085d682666d92 2026-07-28 12:14:17 -0500c15480a71ed50936412eb66827a86bf69c490a37Recently a commit removed the l_tke_aniso flag, which is BFB unless that flag is enabled. That flag was used in the clubb_BFB_varying_flags_gfortran_test, causing it to fail even though we don't care since it only failed for a removed flag, so RESOLVED:8ab3902e812c2883976b4f1f57c085d682666d92editREADMEjenkins_tests/clubb_plot_solver_compare/Jenkinsfile034f61908b84f2574a06cc7da3db70d50696e69d1785260769000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduThe old mixing length calculation seems to be making dycoms2_rf02 fail when using the bicgstab solver. This case was always unstable with bicgstab, so it seemed more like luck before that it was passing. This change just removes the failed output data to prevent pyplotgen from crashing 2026-07-28 12:46:09 -0500034f61908b84f2574a06cc7da3db70d50696e69dThe old mixing length calculation seems to be making dycoms2_rf02 fail when using the bicgstab solver. This case was always unstable with bicgstab, so it seemed more like luck before that it was passing. This change just removes the failed output data to prevent pyplotgen from crashingeditjenkins_tests/clubb_plot_solver_compare/Jenkinsfilegithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse25http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/25/23http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/23/Started by an SCM change23765ae7c30cda88e01b27cd1ee4277d54e4fcb752765ae7c30cda88e01b27cd1ee4277d54e4fcb752refs/remotes/origin/master765ae7c30cda88e01b27cd1ee4277d54e4fcb752765ae7c30cda88e01b27cd1ee4277d54e4fcb752refs/remotes/origin/master765ae7c30cda88e01b27cd1ee4277d54e4fcb752765ae7c30cda88e01b27cd1ee4277d54e4fcb752refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#2330806752366725clubb_gpu_async_output_matching #2323false236627SUCCESS1785227289706http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/23/experimental/experimental_pdfs/doc/trivariate_transport_method_report.mdexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_mixed_moment_allocation.pyexperimental/experimental_pdfs/python/report_scripts/pdf10_arm_rt_thl_structure/generate_report.pyexperimental/experimental_pdfs/python/report_scripts/directional_lscale_pdf_coherence/generate_report.pyexperimental/experimental_pdfs/python/report_scripts/generate_pdf10_arm_noise_report.pyexperimental/experimental_pdfs/README.mdexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_refresh_pdf9_parcel_ensemble_lab.pyexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_transport_2g_prototype.pyexperimental/experimental_pdfs/src/CLUBB_core/pdf_closure_module.F90experimental/experimental_pdfs/python/dash_additions/utilities/refresh_pdf9_parcel_ensemble_lab.pyexperimental/experimental_pdfs/doc/pdf_method_investigation_report.mdexperimental/experimental_pdfs/src/G_unit_test_types/trivariate_transport_pdf_tests.F90experimental/experimental_pdfs/python/dash_additions/utilities/generate_pdf9_parcel_ensemble_diagnostics.pyexperimental/experimental_pdfs/python/report_scripts/pdf10_mixed_third_moment_decision/generate_report.pyexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_vertical_coherence.pyexperimental/experimental_pdfs/python/report_scripts/pdf10_flux_alignment_effect/generate_report.pyexperimental/experimental_pdfs/python/dash_additions/misc_labs/trivariate_transport_sam_lab.pyexperimental/experimental_pdfs/src/CLUBB_core/trivariate_transport_pdf.F90experimental/experimental_pdfs/python/dash_additions/misc_labs/vertical_coherence.pyexperimental/experimental_pdfs/python/dash_additions/misc_labs/pdf9_parcel_ensemble.pyexperimental/experimental_pdfs/python/dash_additions/misc_labs/sam_lscale.pyexperimental/experimental_pdfs/python/dash_additions/misc_labs/transport_2g_prototype.pyexperimental/experimental_pdfs/python/dash_additions/misc_labs/vertically_coherent_transport_sam_lab.pyexperimental/experimental_pdfs/python/report_scripts/pdf10_arm_xp3_budget_audit/generate_pdf10_arm_xp3_budget_report.pyexperimental/experimental_pdfs/python/report_scripts/pdf10_arm_scalar_third_moment_noise_audit/generate_pdf10_arm_noise_report.pyexperimental/experimental_pdfs/src/CLUBB_core/pdf_9_module.F90experimental/experimental_pdfs/src/CLUBB_core/advance_xp3_module.F90experimental/experimental_pdfs/python/report_scripts/generate_pdf10_arm_xp3_budget_report.pyexperimental/experimental_pdfs/python/dash_additions/src/pdf_9_module.F90experimental/experimental_pdfs/doc/vertically_coherent_pdf_diagnosis.mdexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_pdf9_parcel_ensemble_report.pyexperimental/experimental_pdfs/python/dash_additions/misc_labs/__init__.pybf9986a7c169085e4f89733f84407bd2220759341785203996000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduArchiving experimental files that were used to explore some crazy PDF diagnosis methods. Much of this is sporatic LLM generated code and reports. These two methods were tested and did work well when using LES input to model the PDF, but were extemely noisy and unstable in free running clubb. The 'parcel tracking' one performs a mixing-length-like calculation to evolve a persistent 3rd gaussian, then computes a residual ADG1 pair to balance everything out and adhere to clubbs predicted moments. The second one (dubbed trivariate even though they're technically all trivariate) is a 2 Gaussian method that allows for many more degrees of freedom in how we place Gaussian centers and allocate covariance - it does this in part by taking into account rt and thl skewness, which require calculating rtp3 and thlp3. This trivate actually does really well when modelled using LES data, but it's heavy reliance on xp3 terms makes it extremely noisy and bad in clubb - this is why this code also includes a much more sophisticated (and barely tested) advance_xp3_module.F90, as an attempt to make this less worse for the trivariate pdf. 2026-07-27 20:59:56 -0500bf9986a7c169085e4f89733f84407bd222075934Archiving experimental files that were used to explore some crazy PDF diagnosis methods. Much of this is sporatic LLM generated code and reports. These two methods were tested and did work well when using LES input to model the PDF, but were extemely noisy and unstable in free running clubb. The 'parcel tracking' one performs a mixing-length-like calculation to evolve a persistent 3rd gaussian, then computes a residual ADG1 pair to balance everything out and adhere to clubbs predicted moments. The second one (dubbed trivariate even though they're technically all trivariate) is a 2 Gaussian method that allows for many more degrees of freedom in how we place Gaussian centers and allocate covariance - it does this in part by taking into account rt and thl skewness, which require calculating rtp3 and thlp3. This trivate actually does really well when modelled using LES data, but it's heavy reliance on xp3 terms makes it extremely noisy and bad in clubb - this is why this code also includes a much more sophisticated (and barely tested) advance_xp3_module.F90, as an attempt to make this less worse for the trivariate pdf.addexperimental/experimental_pdfs/python/report_scripts/generate_pdf10_arm_xp3_budget_report.pyaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/pdf9_parcel_ensemble.pyaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/vertically_coherent_transport_sam_lab.pyaddexperimental/experimental_pdfs/src/CLUBB_core/trivariate_transport_pdf.F90addexperimental/experimental_pdfs/doc/trivariate_transport_method_report.mdaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/transport_2g_prototype.pyaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_mixed_moment_allocation.pyaddexperimental/experimental_pdfs/doc/vertically_coherent_pdf_diagnosis.mdaddexperimental/experimental_pdfs/python/report_scripts/pdf10_arm_rt_thl_structure/generate_report.pyaddexperimental/experimental_pdfs/python/report_scripts/pdf10_arm_scalar_third_moment_noise_audit/generate_pdf10_arm_noise_report.pyaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/sam_lscale.pyaddexperimental/experimental_pdfs/doc/pdf_method_investigation_report.mdaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_vertical_coherence.pyaddexperimental/experimental_pdfs/src/CLUBB_core/advance_xp3_module.F90addexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_refresh_pdf9_parcel_ensemble_lab.pyaddexperimental/experimental_pdfs/python/report_scripts/generate_pdf10_arm_noise_report.pyaddexperimental/experimental_pdfs/python/dash_additions/utilities/generate_pdf9_parcel_ensemble_diagnostics.pyaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/__init__.pyaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_transport_2g_prototype.pyaddexperimental/experimental_pdfs/src/CLUBB_core/pdf_9_module.F90addexperimental/experimental_pdfs/python/dash_additions/misc_labs/trivariate_transport_sam_lab.pyaddexperimental/experimental_pdfs/python/dash_additions/utilities/refresh_pdf9_parcel_ensemble_lab.pyaddexperimental/experimental_pdfs/python/report_scripts/pdf10_mixed_third_moment_decision/generate_report.pyaddexperimental/experimental_pdfs/python/dash_additions/misc_labs/tests/test_pdf9_parcel_ensemble_report.pyaddexperimental/experimental_pdfs/README.mdaddexperimental/experimental_pdfs/python/report_scripts/pdf10_arm_xp3_budget_audit/generate_pdf10_arm_xp3_budget_report.pyaddexperimental/experimental_pdfs/python/report_scripts/pdf10_flux_alignment_effect/generate_report.pyaddexperimental/experimental_pdfs/python/dash_additions/src/pdf_9_module.F90addexperimental/experimental_pdfs/src/G_unit_test_types/trivariate_transport_pdf_tests.F90addexperimental/experimental_pdfs/python/dash_additions/misc_labs/vertical_coherence.pyaddexperimental/experimental_pdfs/src/CLUBB_core/pdf_closure_module.F90addexperimental/experimental_pdfs/python/report_scripts/directional_lscale_pdf_coherence/generate_report.pysrc/CLUBB_core/advance_xp3_module.F90765ae7c30cda88e01b27cd1ee4277d54e4fcb7521785204361000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduFixing bug in advance_xp3 code. This is BFB because advance_xp3 is hardcoded to false. 2026-07-27 21:06:01 -0500765ae7c30cda88e01b27cd1ee4277d54e4fcb752Fixing bug in advance_xp3 code. This is BFB because advance_xp3 is hardcoded to false.editsrc/CLUBB_core/advance_xp3_module.F90githttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse24http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/24/22http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/22/Started by an SCM change227e9b710922cae26f2bcaf92b858ba00bc6b5f0407e9b710922cae26f2bcaf92b858ba00bc6b5f040refs/remotes/origin/master7e9b710922cae26f2bcaf92b858ba00bc6b5f0407e9b710922cae26f2bcaf92b858ba00bc6b5f040refs/remotes/origin/master7e9b710922cae26f2bcaf92b858ba00bc6b5f0407e9b710922cae26f2bcaf92b858ba00bc6b5f040refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#2244896862366725clubb_gpu_async_output_matching #2222false226529SUCCESS1785054487666http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/22/input/parameter_and_flag_configs/default/configurable_model_flags.ininput/flag_sets/run_bindiff_w_flags_config_core_flags.jsonsrc/CLUBB_core/model_flags.F9002babc6b5a46bda3075bf071426fa20bf200a43b1785002743000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduSetting l_diag_Lscale_from_tau to false by default, and changing it to true in the flag set list the run_bindiff_w_flags test uses so that we keep testing the tau code nightly. This flag changes answers, so this is BIT_CHANGING. 2026-07-25 13:05:43 -050002babc6b5a46bda3075bf071426fa20bf200a43bSetting l_diag_Lscale_from_tau to false by default, and changing it to true in the flag set list the run_bindiff_w_flags test uses so that we keep testing the tau code nightly. This flag changes answers, so this is BIT_CHANGING.editinput/flag_sets/run_bindiff_w_flags_config_core_flags.jsoneditsrc/CLUBB_core/model_flags.F90editinput/parameter_and_flag_configs/default/configurable_model_flags.intests/run_python_vs_fortran_cases.pyafbbe1126523c6ff7a4bb8091f72a242280490ba1785004898000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduSetting l_diag_Lscale_from_tau to false caused dycoms2_rf01_fixed_sst to start failing the python vs fortran test. The differences were small and occured at a late timestep, so to fix the test I put a limiter on the number of timesteps the test runs. 2026-07-25 13:41:38 -0500afbbe1126523c6ff7a4bb8091f72a242280490baSetting l_diag_Lscale_from_tau to false caused dycoms2_rf01_fixed_sst to start failing the python vs fortran test. The differences were small and occured at a late timestep, so to fix the test I put a limiter on the number of timesteps the test runs.edittests/run_python_vs_fortran_cases.pyinput/parameter_and_flag_configs/e3sm_maint32/tunable_parameters.ininput/parameter_and_flag_configs/coriolis_cases/atex_long_parameters.insrc/CLUBB_core/advance_wp2_wp3_module.F90input/flag_sets/run_bindiff_w_flags_config_core_flags.jsoninput/parameter_and_flag_configs/coriolis_cases/coriolis_test_parameters.insrc/clubb_tuner.F90input/parameter_and_flag_configs/Lscale/configurable_model_flags.insrc/CLUBB_core/advance_windm_edsclrm_module.F90src/CLUBB_core/model_flags.F90clubb_python_driver/advance_clubb_core.pyclubb_python_api/tests/test_call_tree_advance_wp2_wp3.pysrc/G_unit_test_types/pdf_parameter_tests.F90clubb_python_api/f2py_fortran_wrappers/advance_windm_edsclrm_module_wrapper.F90clubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyclubb_python_api/clubb_python/CLUBB_core/advance_xm_wpxp.pyclubb_python_api/tests/test_call_tree_advance_xm_wpxp.pyclubb_python_api/clubb_python/CLUBB_core/advance_windm_edsclrm.pysrc/CLUBB_core/parameters_tunable.F90clubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyinput/case_setups/dycoms2_rf02_nd_model.LR.inclubb_python_api/f2py_fortran_wrappers/advance_xm_wpxp_module_wrapper.F90src/CLUBB_core/clip_explicit.F90input/parameter_and_flag_configs/tauMatchLscale/configurable_model_flags.ininput/parameter_and_flag_configs/e3sm_maint32/maint32_defaults_report.mdsrc/CLUBB_core/advance_xm_wpxp_module.F90clubb_python_driver/clubb_case_initalization.pyclubb_python_api/tests/test_advance_core_subs.pyinput/case_setups/dycoms2_rf02_so_model.LR.ininput/case_setups/dycoms2_rf02_do_model.HR.ininput/case_setups/dycoms2_rf02_ds_model.HR.inclubb_python_api/clubb_f2py.pyfinput/parameter_and_flag_configs/e3sm_maint32/configurable_model_flags.ininput/case_setups/dycoms2_rf02_do_model.LR.ininput/parameter_and_flag_configs/default/configurable_model_flags.inclubb_jax/advance_clubb_core.pyinput/case_setups/dycoms2_rf02_so_model.HR.inclubb_python_api/clubb_python/CLUBB_core/clip_explicit.pyinput/parameter_and_flag_configs/compatible_r8029/configurable_model_flags.ininput/parameter_and_flag_configs/e3sm/configurable_model_flags.insrc/Microphys/pdf_hydromet_microphys_wrapper.F90clubb_python_api/f2py_fortran_wrappers/advance_wp2_wp3_module_wrapper.F90input/flag_sets/run_bindiff_w_flags_config_host_flags.jsonclubb_jax/clubb_case_initalization.pyinput/case_setups/READMEinput/parameter_and_flag_configs/e3sm/tunable_parameters.insrc/G_unit_test_types/spurious_source_test.F90clubb_python_api/f2py_fortran_wrappers/clip_explicit_wrapper.F90input/parameter_and_flag_configs/default/tunable_parameters.inclubb_python_api/tests/test_init_sequence.pyinput/case_setups/dycoms2_rf02_nd_model.HR.ininput/parameter_and_flag_configs/coriolis_cases/ekman_parameters.insrc/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/constants_clubb.F90src/clubb_driver.F90input/case_setups/dycoms2_rf02_ds_model.LR.ininput/parameter_and_flag_configs/Lscale/tunable_parameters.ininput/parameter_and_flag_configs/compatible_r8029/tunable_parameters.inclubb_python_api/f2py_fortran_wrappers/model_flags_wrapper.F90clubb_python_api/clubb_python/derived_types/config_flags.py8ab3902e812c2883976b4f1f57c085d682666d921785005093000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving the l_tke_aniso flag 2026-07-25 13:44:53 -05008ab3902e812c2883976b4f1f57c085d682666d92Removing the l_tke_aniso flageditinput/parameter_and_flag_configs/e3sm_maint32/maint32_defaults_report.mdeditinput/parameter_and_flag_configs/e3sm_maint32/tunable_parameters.ineditsrc/CLUBB_core/advance_windm_edsclrm_module.F90editsrc/CLUBB_core/model_flags.F90editclubb_python_api/tests/test_call_tree_advance_xm_wpxp.pyeditsrc/CLUBB_core/clip_explicit.F90editsrc/G_unit_test_types/spurious_source_test.F90editinput/parameter_and_flag_configs/Lscale/tunable_parameters.ineditsrc/clubb_tuner.F90editinput/parameter_and_flag_configs/e3sm/configurable_model_flags.ineditclubb_python_api/f2py_fortran_wrappers/clip_explicit_wrapper.F90editsrc/CLUBB_core/advance_xm_wpxp_module.F90editsrc/CLUBB_core/advance_wp2_wp3_module.F90editclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyeditinput/flag_sets/run_bindiff_w_flags_config_core_flags.jsoneditinput/parameter_and_flag_configs/Lscale/configurable_model_flags.ineditsrc/Microphys/pdf_hydromet_microphys_wrapper.F90editinput/parameter_and_flag_configs/compatible_r8029/configurable_model_flags.ineditclubb_python_api/tests/test_init_sequence.pyeditclubb_python_api/f2py_fortran_wrappers/advance_wp2_wp3_module_wrapper.F90editclubb_python_driver/advance_clubb_core.pyeditinput/flag_sets/run_bindiff_w_flags_config_host_flags.jsoneditinput/parameter_and_flag_configs/e3sm/tunable_parameters.ineditinput/case_setups/dycoms2_rf02_do_model.HR.ineditinput/case_setups/dycoms2_rf02_ds_model.LR.ineditinput/parameter_and_flag_configs/coriolis_cases/atex_long_parameters.ineditinput/case_setups/READMEeditclubb_jax/advance_clubb_core.pyeditinput/case_setups/dycoms2_rf02_so_model.HR.ineditclubb_python_api/clubb_python/CLUBB_core/advance_windm_edsclrm.pyeditsrc/clubb_driver.F90editclubb_python_api/clubb_f2py.pyfeditclubb_python_driver/clubb_case_initalization.pyeditsrc/CLUBB_core/constants_clubb.F90editsrc/G_unit_test_types/pdf_parameter_tests.F90editinput/parameter_and_flag_configs/coriolis_cases/ekman_parameters.ineditinput/parameter_and_flag_configs/tauMatchLscale/configurable_model_flags.ineditclubb_python_api/clubb_python/CLUBB_core/advance_xm_wpxp.pyeditinput/case_setups/dycoms2_rf02_so_model.LR.ineditsrc/CLUBB_core/advance_clubb_core_module.F90editclubb_python_api/tests/test_call_tree_advance_wp2_wp3.pyeditclubb_python_api/f2py_fortran_wrappers/model_flags_wrapper.F90editinput/parameter_and_flag_configs/e3sm_maint32/configurable_model_flags.ineditclubb_python_api/f2py_fortran_wrappers/advance_xm_wpxp_module_wrapper.F90editinput/case_setups/dycoms2_rf02_ds_model.HR.ineditclubb_python_api/tests/test_advance_core_subs.pyeditclubb_python_api/clubb_python/derived_types/config_flags.pyeditclubb_jax/clubb_case_initalization.pyeditclubb_python_api/clubb_python/CLUBB_core/clip_explicit.pyeditinput/parameter_and_flag_configs/compatible_r8029/tunable_parameters.ineditinput/parameter_and_flag_configs/default/configurable_model_flags.ineditsrc/CLUBB_core/parameters_tunable.F90editinput/case_setups/dycoms2_rf02_nd_model.HR.ineditinput/parameter_and_flag_configs/coriolis_cases/coriolis_test_parameters.ineditclubb_python_api/f2py_fortran_wrappers/advance_windm_edsclrm_module_wrapper.F90editinput/case_setups/dycoms2_rf02_do_model.LR.ineditinput/case_setups/dycoms2_rf02_nd_model.LR.ineditinput/parameter_and_flag_configs/default/tunable_parameters.ineditclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyinput/case_setups/bomex_model.ininput/case_setups/fire_model.ininput/case_setups/dycoms2_rf01_model.ininput/case_setups/rico_silhs_model.ininput/case_setups/dycoms2_rf02_ds_model.ininput/case_setups/gabls2_model.ininput/case_setups/cgils_s12_model.ininput/case_setups/rico_model.ininput/case_setups/cgils_s11_model.ininput/case_setups/arm_model.ininput/case_setups/neutral_model.ininput/case_setups/dycoms2_rf02_do_model.ininput/case_setups/mpace_b_model.ininput/case_setups/dycoms2_rf02_nd_model.ininput/case_setups/cgils_s6_model.ininput/case_setups/twp_ice_model.ininput/case_setups/arm_97_model.ininput/case_setups/atex_long_model.ininput/case_setups/dycoms2_rf02_so_model.ininput/case_setups/lba_model.ininput/case_setups/atex_model.ininput/case_setups/gabls3_night_model.ininput/case_setups/wangara_model.ininput/case_setups/dycoms2_rf01_fixed_sst_model.inc743a1427c73d47a5515a8d34c6de40cc266a3fd1785011358000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduMaking les paths in _model.in files correct 2026-07-25 15:29:18 -0500c743a1427c73d47a5515a8d34c6de40cc266a3fdMaking les paths in _model.in files correcteditinput/case_setups/twp_ice_model.ineditinput/case_setups/dycoms2_rf02_so_model.ineditinput/case_setups/atex_model.ineditinput/case_setups/rico_model.ineditinput/case_setups/wangara_model.ineditinput/case_setups/cgils_s12_model.ineditinput/case_setups/neutral_model.ineditinput/case_setups/bomex_model.ineditinput/case_setups/dycoms2_rf01_fixed_sst_model.ineditinput/case_setups/dycoms2_rf01_model.ineditinput/case_setups/atex_long_model.ineditinput/case_setups/fire_model.ineditinput/case_setups/lba_model.ineditinput/case_setups/gabls3_night_model.ineditinput/case_setups/rico_silhs_model.ineditinput/case_setups/cgils_s6_model.ineditinput/case_setups/arm_97_model.ineditinput/case_setups/dycoms2_rf02_nd_model.ineditinput/case_setups/mpace_b_model.ineditinput/case_setups/cgils_s11_model.ineditinput/case_setups/arm_model.ineditinput/case_setups/dycoms2_rf02_do_model.ineditinput/case_setups/dycoms2_rf02_ds_model.ineditinput/case_setups/gabls2_model.inLLM_prompts/update_host_models_after_clubb_changes.mdLLM_prompts/SHORTCUTS.md7e9b710922cae26f2bcaf92b858ba00bc6b5f0401785030901000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduAdding prompt to automate updating host models 2026-07-25 20:55:01 -05007e9b710922cae26f2bcaf92b858ba00bc6b5f040Adding prompt to automate updating host modelseditLLM_prompts/SHORTCUTS.mdaddLLM_prompts/update_host_models_after_clubb_changes.mdgithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse23http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/23/21http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/21/Started by an SCM change210ccbf4f61f326437ea971ff5eca1eb570e8e47110ccbf4f61f326437ea971ff5eca1eb570e8e4711refs/remotes/origin/master0ccbf4f61f326437ea971ff5eca1eb570e8e47110ccbf4f61f326437ea971ff5eca1eb570e8e4711refs/remotes/origin/master0ccbf4f61f326437ea971ff5eca1eb570e8e47110ccbf4f61f326437ea971ff5eca1eb570e8e4711refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#2131098442366725clubb_gpu_async_output_matching #2121false216431SUCCESS1784622490829http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/21/CMakeLists.txt0ccbf4f61f326437ea971ff5eca1eb570e8e47111784573250000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comClarify that the SILHS preprocessor flag in CLUBB is connected to the same flag in sam_clubb. 2026-07-20 13:47:30 -05000ccbf4f61f326437ea971ff5eca1eb570e8e4711Clarify that the SILHS preprocessor flag in CLUBB is connected to the same flag in sam_clubb.editCMakeLists.txtgithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse22http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/22/20http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/20/Started by an SCM change205d01201f199f1883ab7f835dc441fbafdb686d675d01201f199f1883ab7f835dc441fbafdb686d67refs/remotes/origin/master5d01201f199f1883ab7f835dc441fbafdb686d675d01201f199f1883ab7f835dc441fbafdb686d67refs/remotes/origin/master5d01201f199f1883ab7f835dc441fbafdb686d675d01201f199f1883ab7f835dc441fbafdb686d67refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#2021720042366725clubb_gpu_async_output_matching #2020false206356SUCCESS1784104086466http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/20/CMakeLists.txt84b8d6700a274f2dcec4df60a67207e2808308e41784054609000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduFixing SILHS usage so clubb/sam_clubb are compatible 2026-07-14 13:43:29 -050084b8d6700a274f2dcec4df60a67207e2808308e4Fixing SILHS usage so clubb/sam_clubb are compatibleeditCMakeLists.txtsrc/Microphys/Morrison_microphys/microphysics.F905d01201f199f1883ab7f835dc441fbafdb686d671784065113000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduFixing error/diff with morrison microphysics 2026-07-14 16:38:33 -05005d01201f199f1883ab7f835dc441fbafdb686d67Fixing error/diff with morrison microphysicseditsrc/Microphys/Morrison_microphys/microphysics.F90githttp://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockfalse21http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/21/19http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/19/Started by an SCM change19406c3636fd5626566f8c184c71152f19157606b5406c3636fd5626566f8c184c71152f19157606b5refs/remotes/origin/master406c3636fd5626566f8c184c71152f19157606b5406c3636fd5626566f8c184c71152f19157606b5refs/remotes/origin/master406c3636fd5626566f8c184c71152f19157606b5406c3636fd5626566f8c184c71152f19157606b5refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1924376442366725clubb_gpu_async_output_matching #1919false196272SUCCESS1784017686687http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/19/microphysics.F9053dc29afa7900265d39acc9ed78e302153d2e9181783949205000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduRemoved option to disable silhs 2026-07-13 08:26:45 -050053dc29afa7900265d39acc9ed78e302153d2e918Removed option to disable silhseditmicrophysics.F90src/Microphys/Morrison_microphys/microphysics.F90c75d8e56d95be1eb4a5374351e1196ccb4aaa7281783949393000http://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockhancoct@uwm.eduRevert changes to src/Microphys/Morrison_microphys/microphysics.F90 - Changes to this file are supposed to be made in sam_clubb 2026-07-13 08:29:53 -0500c75d8e56d95be1eb4a5374351e1196ccb4aaa728Revert changes to src/Microphys/Morrison_microphys/microphysics.F90editsrc/Microphys/Morrison_microphys/microphysics.F90githttp://carson.math.uwm.edu/jenkins/user/hancockTrevor Hancockfalse20http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/20/18http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/18/Started by an SCM change188e88e823c01ff67c119c389266848c925611c3ca8e88e823c01ff67c119c389266848c925611c3carefs/remotes/origin/master8e88e823c01ff67c119c389266848c925611c3ca8e88e823c01ff67c119c389266848c925611c3carefs/remotes/origin/master8e88e823c01ff67c119c389266848c925611c3ca8e88e823c01ff67c119c389266848c925611c3carefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1839441112366725clubb_gpu_async_output_matching #1818false186183SUCCESS1783758490687http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/18/dash_app/compile_tab/layout.pycmake/utils/CPPDefinitions.cmakesrc/Radiation/BUGSrad/kinds.F90dash_app/compile_tab/runtime.pycompile.py2ed4d5c1c4a025e8245056b860266cab832fc5321783712644000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comRemoved quad precision option (#1330) 2026-07-10 14:44:04 -05002ed4d5c1c4a025e8245056b860266cab832fc532Removed quad precision option 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scriptedittests/run_thread_test.pyeditrun_scripts/run_tuner.pydash_app/README.md085d80ee0d2911eaf1df8845d1ab9f54a1e1bf6a1783452800000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate dash app README with alternative run command 2026-07-07 14:33:20 -0500085d80ee0d2911eaf1df8845d1ab9f54a1e1bf6aUpdate dash app README with alternative run commandeditdash_app/README.mddash_app/plot_tab/plot_types/shared.pydash_app/plot_tab/callbacks_controls.pydash_app/plot_tab/state.py.gitignoredash_app/compile_tab/discovery.pydash_app/app.pydash_app/compile_tab/runtime.pydash_app/assets/35_plot_slider_tooltips.jsdash_app/compile_tab/test_compile_tab_build_status.pydash_app/plot_tab/plot_types/profile_plot.pydash_app/README.mddash_app/assets/14_tab_compile_theme.cssdash_app/plot_tab/plot_types/subcolumn_plot.pydash_app/compile_tab/callbacks.pydash_app/compile_tab/layout.pydash_app/plot_tab/plot_types/budget_plot.pyREADMElaunch_dashboard.shdash_app/assets/12_tab_plots_theme.cssdash_app/requirements.txtdash_app/plot_tab/layout.pydash_app/plot_tab/callbacks_case.pydash_app/plot_tab/plot_types/timeheight_plot.pycompile.py488f449568c63db426704905c4900f5fad8bc25e1783483991000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comLocal python venv for dash app (#1329) * Little UI improvements to compile tab, and adding a dashboard launch script that installs the python dependencies for you in a local python venv * Little dash fixes to compile tab * Fixing little path bug in the old tuner script and the thread test script * Update dash app README with alternative run command * Little UI improvements to compile tab, and adding a dashboard launch script that installs the python dependencies for you in a local python venv * Little compile tab stlying and adding UI element to warn user of violated coding standards. Also improving README * Making the standards check error log viewable from the dash app * Little fix for mac * Plot updates, mainly default settings but a little slider UI * One more little default setting update --------- Co-authored-by: Vincent Larson <vlarson@users.noreply.github.com> 2026-07-07 23:13:11 -0500488f449568c63db426704905c4900f5fad8bc25eLocal python venv for dash app (#1329)editdash_app/plot_tab/layout.pyeditdash_app/compile_tab/test_compile_tab_build_status.pyedit.gitignoreeditdash_app/app.pyeditdash_app/assets/14_tab_compile_theme.cssaddlaunch_dashboard.sheditcompile.pyeditdash_app/plot_tab/plot_types/shared.pyadddash_app/assets/35_plot_slider_tooltips.jseditdash_app/plot_tab/plot_types/budget_plot.pyeditdash_app/requirements.txteditdash_app/plot_tab/plot_types/timeheight_plot.pyeditdash_app/compile_tab/discovery.pyeditdash_app/assets/12_tab_plots_theme.csseditdash_app/compile_tab/layout.pyeditdash_app/plot_tab/callbacks_controls.pyeditdash_app/compile_tab/callbacks.pyeditdash_app/plot_tab/state.pyeditREADMEeditdash_app/plot_tab/callbacks_case.pyeditdash_app/README.mdeditdash_app/plot_tab/plot_types/profile_plot.pyeditdash_app/plot_tab/plot_types/subcolumn_plot.pyeditdash_app/compile_tab/runtime.pygithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse18http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/18/16http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/16/Started by an SCM change16d2415bd01044655b03328e22070af55f99511a59d2415bd01044655b03328e22070af55f99511a59refs/remotes/origin/masterd2415bd01044655b03328e22070af55f99511a59d2415bd01044655b03328e22070af55f99511a59refs/remotes/origin/masterd2415bd01044655b03328e22070af55f99511a59d2415bd01044655b03328e22070af55f99511a59refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1637607912366725clubb_gpu_async_output_matching #1616false165969SUCCESS1783412890758http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/16/input/parameter_and_flag_configs/default/tunable_parameters.in0b2206b6fec8e02c7539b444e1ac3b9aabb04ac51783362268000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comRemove old SVN version control identifier ($Id$) from tunable_parameters.in 2026-07-06 13:24:28 -05000b2206b6fec8e02c7539b444e1ac3b9aabb04ac5Remove old SVN version control identifier ($Id$) from tunable_parameters.ineditinput/parameter_and_flag_configs/default/tunable_parameters.ininput/parameter_and_flag_configs/compatible_r8029/tunable_parameters.in1ebd57b3c3499139dc2d3424417ecd9edbf31e111783362399000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comRemove old SVN version control identifier from compatible_r8029/tunable_parameters.in Removed the version control identifier from the file. 2026-07-06 13:26:39 -05001ebd57b3c3499139dc2d3424417ecd9edbf31e11Remove old SVN version control identifier from compatible_r8029/tunable_parameters.ineditinput/parameter_and_flag_configs/compatible_r8029/tunable_parameters.insrc/CLUBB_core/CMakeLists.txt15e88d15a1d7fa8d7ab5761e084ebc1874e0bf291783372173000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comRemove blank line to test git update scripts 2026-07-06 16:09:33 -050015e88d15a1d7fa8d7ab5761e084ebc1874e0bf29Remove blank line to test git update scriptseditsrc/CLUBB_core/CMakeLists.txtsrc/generalized_grid_test.F90dash_app/compile_tab/runtime.pysrc/CLUBB_core/stats_netcdf.F90cmake/deps/GPTLDependency.cmakesrc/Microphys/pdf_hydromet_microphys_wrapper.F90run_scripts/run_scm.pysrc/CLUBB_core/code_timer_module.F90src/clubb_driver.F90clubb_python_api/run_pytests.shsrc/CLUBB_core/CMakeLists.txtREADMEdash_app/DEVELOPMENT.mdsrc/CMakeLists.txtdash_app/run_tab/callbacks_runs.pycmake/toolchains/linux_x86_64_nvhpc.cmakeclubb_python_api/CMakeLists.txtcompile.pyd2415bd01044655b03328e22070af55f99511a591783400577000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comClubb timer upgrade (#1328) * Upgrading CLUBBs timer system. Now we either can use gptl just by compiling with it, or we use a cpu_time based fallback that was designed to be a crude copy * Giving up on using the build system to detect stale build, switching to a method that just compares timestamps on directories * Fixing small UI bug and removing a bit of dead code in the dash app, also fixing a gptl compiling issue on mac * Little fix for python * Adding a bit about the new timing output in the output section of the README * Improving print statements and disabling timing and iteration prints when debug=-1 --------- Co-authored-by: Gunther Huebler <guntherhuebler@frankie.uits.uwm.edu> 2026-07-07 00:02:57 -0500d2415bd01044655b03328e22070af55f99511a59Clubb timer upgrade (#1328)editrun_scripts/run_scm.pyeditsrc/clubb_driver.F90editclubb_python_api/run_pytests.sheditREADMEeditsrc/generalized_grid_test.F90editsrc/CLUBB_core/stats_netcdf.F90editsrc/Microphys/pdf_hydromet_microphys_wrapper.F90editcmake/deps/GPTLDependency.cmakeeditcmake/toolchains/linux_x86_64_nvhpc.cmakeeditsrc/CLUBB_core/code_timer_module.F90editsrc/CMakeLists.txteditclubb_python_api/CMakeLists.txteditdash_app/run_tab/callbacks_runs.pyeditcompile.pyeditdash_app/compile_tab/runtime.pyeditsrc/CLUBB_core/CMakeLists.txtadddash_app/DEVELOPMENT.mdgithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse17http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/17/15http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/15/Started by user Gunther HueblerhueblerGunther Huebler15be5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterbe5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterbe5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1520342502366725clubb_gpu_async_output_matching #1515false155902SUCCESS1783265347992http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/15/http://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse16http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/16/14http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/14/Started by an SCM change14be5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterbe5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterbe5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1413884232366725clubb_gpu_async_output_matching #1414false145859FAILURE1783240090479http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/14/input_misc/tuner/error_rico.ininput_misc/tuner/error_gabls3_night.indash_app/plot_tab/case_definitions.pyclubb_python_api/clubb_python/CLUBB_core/lapack_interfaces.pyutilities/read_sam_moments/netcdf_var_collector.pyinput_misc/tuner/error_nov11_altocu.indash_app/assets/14_tab_compile_theme.cssinput_misc/tuner/error_dycoms2_rf01.ininput_misc/tuner/error_dycoms2_rf02_ds.inclubb_python_api/clubb_python/CLUBB_core/grid_class.pydash_app/compile_tab/callbacks.pyinput_misc/tuner/error_wangara.intuner/case_defaults.jsoninput_misc/tuner/error_dycoms2_rf02_do.inutilities/create_case_namelist.pyclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyinput_misc/tuner/error_dycoms2_rf02_nd.ininput_misc/tuner/error_arm.indash_app/compile_tab/runtime.pycmake/deps/GPTLDependency.cmakeclubb_python_api/tests/test_udt_return_contract.pydash_app/run_tab/layout.pyclubb_python_driver/io/sounding.pyclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyinput_misc/tuner/error_arm_97.inclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pydash_app/tune_tab/layout.pyinput_misc/tuner/error_fire.ininput_misc/tuner/error_gabls2.intuner/case_defaults.pyinput_misc/tuner/error_atex.intuner/job_runtime.pydash_app/compile_tab/discovery.pyclubb_python_api/clubb_python/prescribe_forcings.pydash_app/README.mdclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyinput_misc/tuner/error_four_cases.inpostprocessing/pyplotgen/config/Case_definitions.pydash_app/assets/11_tab_run_theme.cssclubb_python_api/CMakeLists.txtinput_misc/tuner/error_bomex.ininput_misc/tuner/error_bomex_fire.ininput/les_and_clubb_benchmark_runsdash_app/compile_tab/test_compile_tab_build_status.pyrun_scripts/run_scm.pyinput_misc/tuner/error_all.insrc/clubb_driver.F90input_misc/tuner/error_lba.inREADMEinput_misc/tuner/error_ticket_756.inbe5e217cd91196f514fb60f9668106e072c14c1b1783222022000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comTiny dash updates (#1327) * Cross-platform updates to help with running on Macs mainly. 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additions (#1324) * Starting new additions for tuner - specifically an overall history of all samples and loss metrics with the eventual goal of having fancy SVD and spline things we can do with that * Adding plots to tune tab to visualize data in the overall sample outputs * Adding the enhanced simulated annealed to the tuner. Only real tweak it that it runs workers x batch_size chains independently so that we can utilize the CPU fully * Filtering big values in parameter plot view and making default window length 3600s (1 hour) * Bug fix to metric report - a 0 correlation was able to throw things off, which could occur when a field from either result (clubb or LES) is all 0 without the other one being all zero. Also some small display improvements * Adding sensitivity plots * Updating flag/param selecting method by created a general input/tunable_parameters directory that contains subdirectories for different flag set combos. These can be used by passing in their name to run_scm.py with -config. Also updating references to these files since they moved and also making tests and scripts default to using -override instead of editting files with sed. * Adding buttons to select param/flag config in the tuner * Quality of life improvements for plot tab - now view settings and UI settings are retained when reloading the same case * Fixing missed comment change * Various small UI improvements * Improving tuner history check and little UI fix in run_tab * Fixing tuner environment setup * Fixing little netcdf version issue and adding new test for loss metrics consistency check * Renaming tunable_parameters to parameter_and_flag_configs, also adding -config example to run_scripts README 2026-07-02 23:06:14 -050095d5d12aef49035170773f0714a97f4109bcccddTuner additions 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by an SCM change1231446891daef22d1f1ac63262df21583933565b931446891daef22d1f1ac63262df21583933565b9refs/remotes/origin/master31446891daef22d1f1ac63262df21583933565b931446891daef22d1f1ac63262df21583933565b9refs/remotes/origin/master31446891daef22d1f1ac63262df21583933565b931446891daef22d1f1ac63262df21583933565b9refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1222269262366725clubb_gpu_async_output_matching #1212false125545SUCCESS1782980886205http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/12/dash_app/run_tab/tab.pydash_app/compile_tab/discovery.pydash_app/app.pydash_app/assets/10_theme.cssdash_app/compile_tab/runtime.pyclubb_python_api/README.mddash_app/run_tab/layout.pydash_app/assets/30_run_ui_resize.jsdash_app/compile_tab/tab.pydash_app/assets/14_tab_compile_theme.cssrun_scripts/run_scm.pydash_app/assets/20_autoscroll.jsdash_app/compile_tab/callbacks.pyrun_scripts/run_scm_loss.pydash_app/compile_tab/layout.pyclubb_python_api/run_pytests.shdash_app/plot_tab/plot_types/base_plot.pydash_app/tune_tab/layout.pydash_app/assets/11_tab_run_theme.cssdash_app/compile_tab/__init__.pyclubb_python_api/CMakeLists.txtdash_app/compile_tab/state.py31446891daef22d1f1ac63262df21583933565b91782963365000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comDash compile tab (#1323) * Fixing small UI issues and adding tab that currently only can compile, but the plan is to have to be compile + run tests * Improving compile tab - mainly implementing the ability to select existing builds to use as the version to run with. * Tiny fixes to run tab UI * Improvements to rebuilding - there were tiny bugs. * Updating method of installing python compiles - now we package the python .so libraries with the install build. This makes things simple to import and fixes compilation issues when switching between compilers * Cleanup - reverting various unneccesary things --------- Co-authored-by: Gunther Huebler <guntherhuebler@Gunthers-MacBook-Pro-2.local> 2026-07-01 22:36:05 -050031446891daef22d1f1ac63262df21583933565b9Dash compile tab (#1323)editdash_app/assets/10_theme.csseditrun_scripts/run_scm.pyadddash_app/compile_tab/tab.pyeditdash_app/plot_tab/plot_types/base_plot.pyadddash_app/assets/14_tab_compile_theme.cssadddash_app/compile_tab/runtime.pyeditdash_app/assets/11_tab_run_theme.csseditrun_scripts/run_scm_loss.pyeditclubb_python_api/run_pytests.shadddash_app/compile_tab/discovery.pyadddash_app/compile_tab/__init__.pyeditclubb_python_api/README.mdeditdash_app/app.pyeditdash_app/assets/20_autoscroll.jseditdash_app/run_tab/tab.pyadddash_app/compile_tab/layout.pyeditdash_app/assets/30_run_ui_resize.jseditdash_app/run_tab/layout.pyeditclubb_python_api/CMakeLists.txteditdash_app/tune_tab/layout.pyadddash_app/compile_tab/callbacks.pyadddash_app/compile_tab/state.pygithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse13http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/13/11http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/11/Started by an SCM change117c083496c42caa1b7d18c781134f0cc18ae947487c083496c42caa1b7d18c781134f0cc18ae94748refs/remotes/origin/master7c083496c42caa1b7d18c781134f0cc18ae947487c083496c42caa1b7d18c781134f0cc18ae94748refs/remotes/origin/master7c083496c42caa1b7d18c781134f0cc18ae947487c083496c42caa1b7d18c781134f0cc18ae94748refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1130280542366725clubb_gpu_async_output_matching #1111false115435SUCCESS1782548886080http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/11/clubb_jax/advance_clubb_core.pyclubb_jax/advance_clubb_to_end.pyclubb_python_api/clubb_python/CLUBB_core/stats_clubb_utilities.pyclubb_python_api/f2py_fortran_wrappers/advance_xp3_module_wrapper.F90clubb_python_api/tests/argument_list_enforcer/argument_contract_audit.pyclubb_python_api/clubb_python/CLUBB_core/numerical_check.pyclubb_python_api/f2py_fortran_wrappers/advance_wp2_wp3_module_wrapper.F90clubb_python_driver/advance_clubb_core.pyLLM_prompts/python_api_audit_handoff.mdclubb_python_api/tests/test_argument_contract_audit.pyclubb_python_api/tests/test_call_tree_advance_wp2_wp3.pyclubb_python_api/clubb_python/CLUBB_core/advance_xm_wpxp.pyclubb_python_api/clubb_python/CLUBB_core/advance_clubb_core.pyclubb_jax/clubb_case_initalization.pyclubb_python_api/tests/test_call_tree_advance_xm_wpxp.pyclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyclubb_python_api/f2py_fortran_wrappers/stats_clubb_utilities_wrapper.F90clubb_python_api/f2py_fortran_wrappers/advance_xm_wpxp_module_wrapper.F90clubb_python_api/f2py_fortran_wrappers/advance_xp2_xpyp_module_wrapper.F90LLM_prompts/update_python_api_and_drivers.mdclubb_python_api/tests/test_call_tree_advance_xp3.pyclubb_python_api/tests/test_call_tree_advance_xp2_xpyp.pyclubb_python_driver/advance_clubb_to_end.pyclubb_python_driver/clubb_case_initalization.pyclubb_python_api/clubb_python/CLUBB_core/advance_xp3.pyclubb_python_api/tests/test_call_tree_stats_accumulate.pyclubb_python_api/clubb_f2py.pyfclubb_python_api/tests/test_call_tree_advance_core.pyclubb_python_api/clubb_python/CLUBB_core/advance_xp2_xpyp.py1ba1f81f6b41e649dfe497947dc4c22c69f38f6c1782446549000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduUpdating python contract audit to better detect API arg list discrepancies from the underlying fortran arg lists. Also adding a temporary handoff file and improving the python api fix shortcut (cherry picked from commit 47106db56945d6d0c1f962cc77d205db99d60f4f) 2026-06-25 23:02:29 -05001ba1f81f6b41e649dfe497947dc4c22c69f38f6cUpdating python contract audit to better detect API arg list discrepancies from the underlying fortran arg lists. Also adding a temporary handoff file and improving the python api fix shortcuteditclubb_python_api/clubb_python/CLUBB_core/advance_xp2_xpyp.pyeditclubb_python_api/tests/test_call_tree_advance_xp2_xpyp.pyeditclubb_python_driver/advance_clubb_core.pyeditclubb_jax/advance_clubb_core.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_clubb_core.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_xp3.pyeditclubb_python_api/tests/test_call_tree_stats_accumulate.pyeditclubb_python_api/f2py_fortran_wrappers/advance_xp3_module_wrapper.F90editclubb_python_driver/clubb_case_initalization.pyeditclubb_python_api/clubb_f2py.pyfeditclubb_jax/clubb_case_initalization.pyeditclubb_python_api/tests/test_call_tree_advance_core.pyeditclubb_python_api/f2py_fortran_wrappers/advance_wp2_wp3_module_wrapper.F90editclubb_python_api/tests/argument_list_enforcer/argument_contract_audit.pyeditclubb_jax/advance_clubb_to_end.pyeditclubb_python_api/clubb_python/CLUBB_core/stats_clubb_utilities.pyeditclubb_python_api/tests/test_call_tree_advance_xp3.pyaddLLM_prompts/python_api_audit_handoff.mdeditclubb_python_driver/advance_clubb_to_end.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_xm_wpxp.pyeditclubb_python_api/tests/test_argument_contract_audit.pyeditclubb_python_api/clubb_python/CLUBB_core/numerical_check.pyeditclubb_python_api/f2py_fortran_wrappers/advance_xp2_xpyp_module_wrapper.F90editclubb_python_api/f2py_fortran_wrappers/advance_xm_wpxp_module_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyeditclubb_python_api/tests/test_call_tree_advance_wp2_wp3.pyeditclubb_python_api/f2py_fortran_wrappers/stats_clubb_utilities_wrapper.F90editLLM_prompts/update_python_api_and_drivers.mdeditclubb_python_api/tests/test_call_tree_advance_xm_wpxp.pyclubb_python_api/clubb_python/CLUBB_core/sigma_sqd_w_module.pyclubb_python_api/tests/test_call_tree_corr_varnce_module.pyclubb_python_api/clubb_python/CLUBB_core/stats_clubb_utilities.pyclubb_python_api/tests/test_call_tree_mixing_length.pyclubb_python_api/clubb_python/CLUBB_core/mixing_length.pyclubb_python_api/f2py_fortran_wrappers/ly93_pdf_wrapper.F90clubb_python_api/clubb_python/CLUBB_core/adg1_adg2_3d_luhar_pdf.pyclubb_python_api/clubb_python/CLUBB_core/penta_bicgstab_solver.pyclubb_python_api/clubb_python/CLUBB_core/new_tsdadg_pdf.pyclubb_python_api/clubb_python/CLUBB_core/grid_class.pyclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf_main.pyclubb_python_api/clubb_python/CLUBB_core/advance_xm_wpxp.pyclubb_python_driver/radiation.pyclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyclubb_python_api/clubb_python/CLUBB_core/advance_windm_edsclrm.pyclubb_python_api/clubb_python/CLUBB_core/saturation.pyclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyclubb_python_api/f2py_fortran_wrappers/radiation_module_wrapper.F90clubb_python_api/clubb_python/CLUBB_core/matrix_solver_wrapper.pyclubb_python_api/f2py_fortran_wrappers/adg1_adg2_3d_luhar_pdf_wrapper.F90clubb_python_api/clubb_python/CLUBB_core/remapping_module.pyclubb_python_api/clubb_python/CLUBB_core/diffusion.pyclubb_python_api/tests/test_advance_core_subs.pyclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pyclubb_python_api/tests/test_call_tree_numerical_check.pyclubb_python_api/clubb_python/CLUBB_core/pos_definite_module.pyclubb_python_api/clubb_f2py.pyfclubb_python_api/clubb_python/CLUBB_core/turbulent_adv_pdf.pyclubb_python_api/clubb_python/CLUBB_core/calc_pressure.pyclubb_python_api/f2py_fortran_wrappers/new_tsdadg_pdf_wrapper.F90clubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf.pyclubb_python_api/clubb_python/CLUBB_core/clip_explicit.pyclubb_python_api/clubb_python/CLUBB_core/sponge_layer_damping.pyclubb_python_api/tests/test_call_tree_splat.pyclubb_python_api/clubb_python/prescribe_forcings.pyclubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyclubb_python_api/clubb_python/CLUBB_core/sfc_varnce_module.pyclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyclubb_python_api/tests/argument_list_enforcer/argument_contract_audit.pyclubb_python_api/clubb_python/CLUBB_core/numerical_check.pyclubb_python_api/clubb_python/CLUBB_core/pdf_parameter_module.pyclubb_python_api/clubb_python/CLUBB_core/advance_helper.pyclubb_python_api/tests/test_argument_contract_audit.pyLLM_prompts/python_api_audit_handoff.mdclubb_python_api/clubb_python/CLUBB_core/corr_varnce_module.pyclubb_python_api/clubb_python/CLUBB_core/new_pdf.pyclubb_python_api/clubb_python/CLUBB_core/advance_clubb_core.pyclubb_python_api/f2py_fortran_wrappers/new_hybrid_pdf_wrapper.F90clubb_python_api/f2py_fortran_wrappers/new_pdf_wrapper.F90clubb_python_api/tests/test_call_tree_turbulent_adv_pdf.pyclubb_python_api/clubb_python/radiation.pyclubb_python_api/clubb_python/CLUBB_core/ly93_pdf.pyclubb_python_api/clubb_python/CLUBB_core/mono_flux_limiter.pyclubb_python_api/clubb_python/CLUBB_core/advance_xp3.pyclubb_python_api/f2py_fortran_wrappers/sponge_layer_damping_wrapper.F90clubb_python_api/clubb_python/CLUBB_core/new_pdf_main.pyclubb_python_api/clubb_python/CLUBB_core/skx_module.pyclubb_python_api/clubb_python/CLUBB_core/advance_xp2_xpyp.py0da14a07a2ef02d9517c80c18d0a3a285dc08d041782446642000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduOur argument_contract_audit.py script checks if the python_api matches the underlying fortran - this makes it more strict, and fixes many of the inconsistencies it found. (cherry picked from commit f5c3b99d56499acc2a706cf024dd802f73030dd2) 2026-06-25 23:04:02 -05000da14a07a2ef02d9517c80c18d0a3a285dc08d04Our argument_contract_audit.py script checks if the python_api matches the underlying fortran - this makes it more strict, and fixes many of the inconsistencies it found.editclubb_python_api/clubb_python/CLUBB_core/sponge_layer_damping.pyeditclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyeditclubb_python_api/clubb_python/CLUBB_core/turbulent_adv_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/penta_bicgstab_solver.pyeditclubb_python_api/clubb_python/CLUBB_core/adg1_adg2_3d_luhar_pdf.pyeditclubb_python_api/f2py_fortran_wrappers/new_pdf_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/matrix_solver_wrapper.pyeditclubb_python_api/clubb_python/prescribe_forcings.pyeditclubb_python_api/clubb_python/CLUBB_core/pos_definite_module.pyeditclubb_python_api/clubb_python/radiation.pyeditclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf_main.pyeditclubb_python_api/tests/test_advance_core_subs.pyeditclubb_python_api/clubb_python/CLUBB_core/mixing_length.pyeditclubb_python_api/clubb_python/CLUBB_core/pdf_parameter_module.pyeditclubb_python_api/clubb_python/CLUBB_core/new_tsdadg_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyeditclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyeditclubb_python_api/tests/test_call_tree_corr_varnce_module.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_helper.pyeditclubb_python_api/clubb_python/CLUBB_core/mono_flux_limiter.pyeditclubb_python_api/f2py_fortran_wrappers/new_hybrid_pdf_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pyeditclubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyeditclubb_python_api/f2py_fortran_wrappers/ly93_pdf_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/advance_windm_edsclrm.pyeditclubb_python_api/clubb_python/CLUBB_core/sigma_sqd_w_module.pyeditclubb_python_api/f2py_fortran_wrappers/new_tsdadg_pdf_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyeditclubb_python_api/tests/test_argument_contract_audit.pyeditclubb_python_api/tests/test_call_tree_splat.pyeditclubb_python_api/f2py_fortran_wrappers/radiation_module_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/ly93_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/calc_pressure.pyeditclubb_python_api/tests/test_call_tree_turbulent_adv_pdf.pyeditclubb_python_api/tests/argument_list_enforcer/argument_contract_audit.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_xm_wpxp.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_xp3.pyeditclubb_python_api/clubb_python/CLUBB_core/corr_varnce_module.pyeditclubb_python_api/clubb_python/CLUBB_core/sfc_varnce_module.pydeleteLLM_prompts/python_api_audit_handoff.mdeditclubb_python_driver/radiation.pyeditclubb_python_api/clubb_python/CLUBB_core/skx_module.pyeditclubb_python_api/clubb_python/CLUBB_core/new_pdf_main.pyeditclubb_python_api/clubb_f2py.pyfeditclubb_python_api/clubb_python/CLUBB_core/advance_clubb_core.pyeditclubb_python_api/clubb_python/CLUBB_core/diffusion.pyeditclubb_python_api/clubb_python/CLUBB_core/grid_class.pyeditclubb_python_api/clubb_python/CLUBB_core/stats_clubb_utilities.pyeditclubb_python_api/tests/test_call_tree_numerical_check.pyeditclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/clip_explicit.pyeditclubb_python_api/f2py_fortran_wrappers/sponge_layer_damping_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/new_pdf.pyeditclubb_python_api/tests/test_call_tree_mixing_length.pyeditclubb_python_api/clubb_python/CLUBB_core/saturation.pyeditclubb_python_api/f2py_fortran_wrappers/adg1_adg2_3d_luhar_pdf_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/advance_xp2_xpyp.pyeditclubb_python_api/clubb_python/CLUBB_core/numerical_check.pyclubb_python_api/clubb_python/clubb_api.pyclubb_python_api/tests/test_call_tree_mixing_length.pyclubb_python_api/clubb_python/CLUBB_core/mixing_length.pyclubb_python_api/clubb_python/CLUBB_core/adg1_adg2_3d_luhar_pdf.pyclubb_python_api/clubb_python/CLUBB_core/new_tsdadg_pdf.pyclubb_python_api/tests/test_call_tree_transport.pyclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf_main.pyclubb_python_driver/advance_clubb_core.pyclubb_python_api/f2py_fortran_wrappers/mixing_length_wrapper.F90clubb_python_api/tests/test_call_tree_advance_wp2_wp3.pyclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyclubb_python_api/tests/test_call_tree_advance_xm_wpxp.pyclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyclubb_python_api/f2py_fortran_wrappers/pdf_closure_module_wrapper.F90clubb_python_api/tests/test_udt_return_contract.pyclubb_python_api/tests/test_init_pressure.pyclubb_python_api/tests/test_call_tree_advance_xp2_xpyp.pyclubb_python_api/clubb_python/CLUBB_core/matrix_solver_wrapper.pyclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyclubb_python_api/clubb_python/CLUBB_core/diffusion.pyclubb_python_driver/clubb_case_initalization.pyclubb_python_api/tests/test_advance_core_subs.pyclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pyclubb_python_api/tests/test_call_tree_stats_accumulate.pyclubb_python_api/tests/test_stats.pyclubb_python_api/clubb_f2py.pyfclubb_python_api/tests/test_call_tree_precipitation_fraction.pyclubb_python_api/clubb_python/CLUBB_core/calc_pressure.pyclubb_python_api/tests/test_call_tree_ly93.pyclubb_python_api/tests/test_call_tree_sponge.pyclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf.pyclubb_python_api/clubb_python/CLUBB_core/sponge_layer_damping.pyclubb_python_api/tests/test_call_tree_luhar.pyclubb_python_api/clubb_python/prescribe_forcings.pyclubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyclubb_python_api/tests/argument_list_enforcer/argument_contract_audit.pyclubb_python_api/clubb_python/CLUBB_core/pdf_parameter_module.pyclubb_python_api/f2py_fortran_wrappers/advance_wp2_wp3_module_wrapper.F90clubb_python_api/clubb_python/CLUBB_core/advance_helper.pyclubb_python_api/clubb_python/CLUBB_core/new_pdf.pyclubb_python_api/clubb_python/CLUBB_core/advance_clubb_core.pyclubb_python_api/tests/test_call_tree_skx.pyclubb_python_api/tests/test_call_tree_new_pdf.pyclubb_jax/clubb_case_initalization.pyclubb_python_api/tests/test_call_tree_new_hybrid_pdf.pyclubb_python_api/tests/test_call_tree_mono_flux.pyclubb_python_api/tests/test_call_tree_advance_xp3.pyclubb_python_api/clubb_python/radiation.pyclubb_python_driver/advance_clubb_to_end.pyclubb_python_api/clubb_python/CLUBB_core/ly93_pdf.pyclubb_python_api/f2py_fortran_wrappers/new_hybrid_pdf_main_wrapper.F90clubb_python_api/tests/test_call_tree_new_tsdadg.pyclubb_python_api/tests/test_call_tree_advance_core.pyclubb_python_api/tests/test_call_tree_remap.pyclubb_python_api/clubb_python/CLUBB_core/skx_module.pyclubb_python_api/clubb_python/CLUBB_core/advance_xp2_xpyp.pye73f5d17f344ccfbf4741d978a7e0dd60a06fb251782446735000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduadvance_clubb_core.py cleanup and removing strange compat_kwargs usages that seem like artifacts of laziness (cherry picked from commit 9056400901e270333b80ee8f66af055d395b8020) 2026-06-25 23:05:35 -0500e73f5d17f344ccfbf4741d978a7e0dd60a06fb25advance_clubb_core.py cleanup and removing strange compat_kwargs usages that seem like artifacts of lazinesseditclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyeditclubb_python_api/clubb_python/CLUBB_core/skx_module.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_clubb_core.pyeditclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_xp2_xpyp.pyeditclubb_python_api/clubb_python/CLUBB_core/diffusion.pyeditclubb_python_api/tests/test_stats.pyeditclubb_python_api/tests/test_call_tree_advance_xp2_xpyp.pyeditclubb_python_api/tests/test_call_tree_skx.pyeditclubb_python_api/tests/test_call_tree_new_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/sponge_layer_damping.pyeditclubb_python_api/tests/test_call_tree_advance_xp3.pyeditclubb_python_api/tests/test_call_tree_new_hybrid_pdf.pyeditclubb_python_api/clubb_f2py.pyfeditclubb_python_api/tests/test_call_tree_advance_xm_wpxp.pyeditclubb_python_api/tests/test_call_tree_mixing_length.pyeditclubb_python_api/clubb_python/radiation.pyeditclubb_python_api/tests/test_call_tree_transport.pyeditclubb_python_driver/advance_clubb_to_end.pyeditclubb_python_api/clubb_python/CLUBB_core/calc_pressure.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_helper.pyeditclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyeditclubb_python_api/tests/test_call_tree_advance_core.pyeditclubb_python_api/tests/test_call_tree_precipitation_fraction.pyeditclubb_python_api/clubb_python/CLUBB_core/mixing_length.pyeditclubb_python_api/clubb_python/CLUBB_core/pdf_parameter_module.pyeditclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyeditclubb_python_api/tests/test_call_tree_mono_flux.pyeditclubb_python_api/tests/test_udt_return_contract.pyeditclubb_python_api/tests/test_call_tree_ly93.pyeditclubb_python_driver/advance_clubb_core.pyeditclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pyeditclubb_python_api/tests/test_call_tree_sponge.pyeditclubb_python_driver/clubb_case_initalization.pyeditclubb_python_api/clubb_python/clubb_api.pyeditclubb_python_api/f2py_fortran_wrappers/pdf_closure_module_wrapper.F90editclubb_python_api/tests/argument_list_enforcer/argument_contract_audit.pyeditclubb_python_api/clubb_python/CLUBB_core/new_tsdadg_pdf.pyeditclubb_python_api/f2py_fortran_wrappers/advance_wp2_wp3_module_wrapper.F90editclubb_python_api/tests/test_call_tree_luhar.pyeditclubb_python_api/tests/test_call_tree_new_tsdadg.pyeditclubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyeditclubb_python_api/tests/test_advance_core_subs.pyeditclubb_python_api/clubb_python/CLUBB_core/ly93_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/new_pdf.pyeditclubb_python_api/tests/test_call_tree_stats_accumulate.pyeditclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf_main.pyeditclubb_python_api/tests/test_init_pressure.pyeditclubb_python_api/clubb_python/CLUBB_core/matrix_solver_wrapper.pyeditclubb_python_api/clubb_python/CLUBB_core/adg1_adg2_3d_luhar_pdf.pyeditclubb_jax/clubb_case_initalization.pyeditclubb_python_api/tests/test_call_tree_remap.pyeditclubb_python_api/tests/test_call_tree_advance_wp2_wp3.pyeditclubb_python_api/f2py_fortran_wrappers/new_hybrid_pdf_main_wrapper.F90editclubb_python_api/f2py_fortran_wrappers/mixing_length_wrapper.F90editclubb_python_api/clubb_python/prescribe_forcings.pyclubb_jax/advance_clubb_core.pyclubb_python_api/clubb_python/CLUBB_core/error_code.pyclubb_python_api/clubb_python/clubb_api.pyclubb_jax/advance_clubb_to_end.pyclubb_python_api/clubb_python/CLUBB_core/sponge_layer_damping.pyclubb_python_api/tests/test_call_tree_luhar.pyclubb_python_api/tests/test_call_tree_mixing_length.pyclubb_python_api/clubb_python/prescribe_forcings.pyclubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyclubb_python_api/clubb_python/CLUBB_core/mixing_length.pyclubb_python_api/clubb_python/CLUBB_core/adg1_adg2_3d_luhar_pdf.pyclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyclubb_python_api/tests/argument_list_enforcer/argument_contract_audit.pyLLM_prompts/port_underlying_fortran_to_other_languages.mdclubb_python_api/clubb_python/CLUBB_core/pdf_parameter_module.pyclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf_main.pyclubb_python_driver/advance_clubb_core.pyclubb_python_api/tests/test_argument_contract_audit.pyclubb_python_api/tests/test_call_tree_advance_wp2_wp3.pyclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyclubb_python_api/clubb_python/CLUBB_core/advance_clubb_core.pyclubb_python_api/tests/test_call_tree_new_pdf.pyclubb_python_api/clubb_python/CLUBB_core/loss_driver.pyLLM_prompts/SHORTCUTS.mdclubb_jax/clubb_case_initalization.pyclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyclubb_python_api/tests/test_call_tree_advance_xm_wpxp.pyclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyclubb_python_api/f2py_fortran_wrappers/clubb_loss_driver_wrapper.F90clubb_python_api/tests/test_call_tree_pdf_closure_driver.pyclubb_python_api/tests/test_call_tree_mono_flux.pyclubb_python_api/t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Hueblerhuebler@uwm.eduImproving audit script even more, fixing issues it found. Also making advance_clubb_core.py nice and making an LLM shortcut for how to repeat the process (cherry picked from commit 25b41435d7bfbbe03f2736440bdcbf4330f863ab) 2026-06-25 23:49:56 -05001fa8fdebc019e2807e0031f7233ef85243f80ad6Improving audit script even more, fixing issues it found. Also making advance_clubb_core.py nice and making an LLM shortcut for how to repeat the processeditclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyeditclubb_python_api/clubb_python/clubb_api.pyeditclubb_python_api/tests/test_call_tree_mixing_length.pyeditclubb_python_api/tests/test_call_tree_precipitation_fraction.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_wp2_wp3.pyeditclubb_python_api/tests/test_argument_contract_audit.pyeditclubb_jax/advance_clubb_core.pyeditclubb_python_api/tests/test_call_tree_advance_xp3.pyeditclubb_python_api/tests/test_call_tree_advance_xm_wpxp.pyeditclubb_python_api/tests/test_stats.pyeditclubb_python_driver/clubb_case_initalization.pyeditclubb_python_api/clubb_python/CLUBB_core/loss_driver.pyeditclubb_python_api/clubb_python/prescribe_forcings.pyeditclubb_python_api/tests/test_call_tree_advance_xp2_xpyp.pyeditclubb_python_api/clubb_python/CLUBB_core/mono_flux_limiter.pyeditclubb_python_api/clubb_python/CLUBB_core/new_hybrid_pdf_main.pyeditclubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyaddLLM_prompts/port_underlying_fortran_to_other_languages.mdeditLLM_prompts/SHORTCUTS.mdeditclubb_jax/advance_clubb_to_end.pyeditclubb_python_api/clubb_python/CLUBB_core/sponge_layer_damping.pyeditclubb_python_api/tests/test_call_tree_luhar.pyeditclubb_python_api/clubb_f2py.pyfeditclubb_python_api/clubb_python/CLUBB_core/adg1_adg2_3d_luhar_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/new_pdf_main.pyeditclubb_python_api/tests/test_call_tree_matrix_solver_wrapper.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_xp2_xpyp.pyeditclubb_python_api/tests/test_call_tree_mono_flux.pyeditclubb_python_api/clubb_python/CLUBB_core/mixing_length.pyeditclubb_python_api/clubb_python/CLUBB_core/diffusion.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_clubb_core.pyeditclubb_jax/clubb_case_initalization.pyeditclubb_python_driver/advance_clubb_core.pyeditclubb_python_api/tests/test_call_tree_advance_wp2_wp3.pyeditclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyeditclubb_python_api/clubb_python/CLUBB_core/matrix_solver_wrapper.pyeditclubb_python_api/tests/test_call_tree_pdf_closure_driver.pyeditclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyeditclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyeditclubb_python_api/tests/test_call_tree_stats_accumulate.pyeditclubb_python_api/f2py_fortran_wrappers/clubb_loss_driver_wrapper.F90editclubb_python_api/tests/test_advance_core_subs.pyeditclubb_python_driver/advance_clubb_to_end.pyeditclubb_python_api/clubb_python/CLUBB_core/pdf_parameter_module.pyeditclubb_python_api/tests/test_call_tree_new_pdf.pyeditclubb_python_api/clubb_python/CLUBB_core/error_code.pyeditclubb_python_api/tests/argument_list_enforcer/argument_contract_audit.pyrun_scripts/READMEtests/READMErun_scripts/run_bindiff_all.pytests/run_bindiff_w_flags.py7c083496c42caa1b7d18c781134f0cc18ae947481782494071000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduBuilding varying flags bindiff into run_bindiff_all.py, this just makes sense and helps fix the varying flags BFB test 2026-06-26 12:14:31 -05007c083496c42caa1b7d18c781134f0cc18ae94748Building varying flags bindiff into run_bindiff_all.py, this just makes sense and helps fix the varying flags BFB testeditrun_scripts/READMEedittests/run_bindiff_w_flags.pyedittests/READMEeditrun_scripts/run_bindiff_all.pygithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse12http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/12/10http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/10/Started by an SCM change10955aa780e3a47b6accf7af68d85f76ad53baff39955aa780e3a47b6accf7af68d85f76ad53baff39refs/remotes/origin/master955aa780e3a47b6accf7af68d85f76ad53baff39955aa780e3a47b6accf7af68d85f76ad53baff39refs/remotes/origin/master955aa780e3a47b6accf7af68d85f76ad53baff39955aa780e3a47b6accf7af68d85f76ad53baff39refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1089275752366725clubb_gpu_async_output_matching #1010false105341SUCCESS1782462489519http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/10/run_scripts/run_clubb_w_varying_flags.pyrun_scripts/run_tuner.pyjenkins_tests/clubb_restart_silhs_gfortran_test/Jenkinsfileclubb_python_driver/README.mdrun_scripts/time_scm_all.bashtests/test_monoflux_limiter_GPU.pyinput/flag_sets/run_bindiff_w_flags_config_example.jsoninput/flag_sets/run_bindiff_w_flags_config_core_flags.jsonrun_scripts/generate_seed.bashjenkins_tests/clubb_timestep_convergence_gfortran_test/Jenkinsfilerun_scripts/run_scm_loss.pyrun_scripts/run_G_unit_tests.bashclubb_jax/JAX_CONVERSION_PLAN.mdjenkins_tests/clubb_monoflux_CPU_vs_GPU_diff/Jenkinsfilesrc/generalized_grid_test.F90run_scripts/create_case_namelist.pyrun_scripts/ensemble_run/ensembles/.gitignoretuner/paths.pytests/run_thread_test.pyjenkins_tests/clubb_generalized_vertical_grid_test/Jenkinsfilerun_scripts/run_scm.bashrun_scripts/check_budget_balance.pyjenkins_tests/clubb_restart_gfortran_test/Jenkinsfilerun_scripts/run_scm_collect_suite.bashclubb_jax/README.mdjenkins_tests/clubb_nvhpc_gpu_column_mirror_test/Jenkinsfilerun_scripts/run_scm_collect.bashtests/run_restart_test.pyrun_scripts/run_silhs_test.bashrun_scripts/ensemble_run/create_output.bashtests/run_loss_output_consistency.pyrun_scripts/run_bindiff_w_flags_config_core_flags.jsontuner/test_tuning_strategy.pyrun_scripts/run_scm_debug.bashrun_scripts/test_fatal_error_handling.bashrun_scripts/run_stats_output_consistency.pyrun_scripts/run_bindiff_w_flags.pyrun_scripts/run_python_vs_fortran_cases.pytests/run_benchmark_converter_test.pyrun_scripts/run_clubb_and_pyplotgen.pyrun_scripts/run_clubb_conv_test.bashtests/run_stats_output_consistency.pyjenkins_tests/clubb_silhs_convergence_gfortran/Jenkinsfilejenkins_tests/clubb_stats_output_consistency_gfortran_test/Jenkinsfilerun_scripts/run_G_unit_tests.pyjenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfilejenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfilesrc/clubb_driver.F90run_scripts/test_fatal_error_handling.pyREADMEtuner/README.mdrun_scripts/run_silhs_test.pypostprocessing/timestep_convergence_test.bashjenkins_tests/clubb_G_unit_gfortran_tests/Jenkinsfiletests/test_fatal_error_handling.pyjenkins_tests/clubb_cmake_output_matching/Jenkinsfiletests/run_clubb_conv_test.pytests/run_timestep_tests.pyrun_scripts/run_bindiff_all.bashpostprocessing/latin_hypercube_plotting/variance_analysis_scripts/rms_vs_sample_points/silhs_varying_sp_output.shrun_scripts/ensemble_run/READMErun_scripts/ensemble_run/ensemble_run.bashtests/check_budget_balance.pyrun_scripts/ensemble_run/submission/.gitignorerun_scripts/READMEjenkins_tests/clubb_openmp_gfortran_test/Jenkinsfileutilities/create_case_namelist.pyrun_scripts/run_benchmark_converter_test.pytests/run_jax_vs_fortran_cases.pytests/READMEtests/test_fire_tuner.pytuner/tuning_worker.pyrun_scripts/run_scm_all.bashjenkins_tests/clubb_python_test/Jenkinsfilerun_scripts/run_bindiff_w_flags_config_host_flags.jsontests/check_mirrored_multi_col_output.pyrun_scripts/run_bindiff_w_flags_requirements.txtrun_scripts/create_multi_col_params.pyrun_scripts/run_loss_output_consistency.pyjenkins_tests/clubb_generalized_vert_grid_host_flags/Jenkinsfiletests/run_G_unit_tests.pyrun_scripts/fire_tuner.pypostprocessing/pyplotgen/pyplotgen.pysrc/int2txt.F90run_scripts/run_bindiff_w_flags_config_example.jsontests/run_python_vs_fortran_cases.pyrun_scripts/run_clubb_conv_test.pyrun_scripts/run_thread_test.bashrun_scripts/fill_holes.pyrun_scripts/check_mirrored_multi_col_output.pyrun_scripts/ensemble_run/input/.gitignorerun_scripts/RUN_CASESjenkins_tests/clubb_fire_tuning_gfortran_test/Jenkinsfiletests/run_bindiff_w_flags.pyrun_scripts/run_clubb_and_pyplotgen.bashjenkins_tests/run_bindiff_w_varying_flags_against_master/Jenkinsfilejenkins_tests/clubb_G_unit_reverse_dir_grid_test/Jenkinsfilerun_scripts/run_timestep_tests.bashinput/flag_sets/run_bindiff_w_flags_config_host_flags.jsonjenkins_tests/clubb_uninit_var_oracle_test/Jenkinsfilejenkins_tests/clubb_check_budget_balance_gfortran/Jenkinsfilerun_scripts/run_timestep_tests.pyjenkins_tests/clubb_timestep_gfortran_tests/Jenkinsfilerun_scripts/ensemble_run/output/.gitignorerun_scripts/run_tuner.bashLLM_prompts/update_python_api_and_drivers.mdtests/run_silhs_test.pydash_app/fill_holes.pyrun_scripts/diff_netcdf_outputs.pyrun_scripts/ensemble_run/ensemble_setup.bashrun_scripts/run_restart_test.pyrun_scripts/run_jax_vs_fortran_cases.pyrun_scripts/run_bindiff_varying_flags_output.pyrun_scripts/run_scm.pyrun_scripts/run_bindiff_all.pyutilities/create_multi_col_params.pyrun_scripts/run_thread_test.pyrun_scripts/test_monoflux_limiter_GPU.pysrc/CMakeLists.txtsrc/error.F90run_scripts/check_multi_col_error.pye04956358685c2869358db8b6d46d16cf9744b031782439617000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comCleaning up run_scripts (#1320) * Cleaning up run_scripts by removing old bash files, also moving many scripts into a new tests/ directory, since those are tests. Fixing a small bug in clubb_driver as well, just needed to move a print statement, otherwise it tries writing to a closed file. * A little cleanup and better READMEs for run_scripts and tests 2026-06-25 21:06:57 -0500e04956358685c2869358db8b6d46d16cf9744b03Cleaning up run_scripts (#1320)deleterun_scripts/run_bindiff_w_flags.pyedittuner/README.mdaddtests/run_thread_test.pyaddtests/test_fire_tuner.pyeditjenkins_tests/clubb_openmp_gfortran_test/Jenkinsfileeditjenkins_tests/clubb_G_unit_gfortran_tests/Jenkinsfileeditjenkins_tests/clubb_monoflux_CPU_vs_GPU_diff/Jenkinsfiledeleterun_scripts/ensemble_run/submission/.gitignoredeleterun_scripts/ensemble_run/create_output.bashdeleterun_scripts/run_scm_collect_suite.basheditsrc/clubb_driver.F90addtests/test_monoflux_limiter_GPU.pyeditsrc/error.F90addinput/flag_sets/run_bindiff_w_flags_config_example.jsonaddtests/run_restart_test.pydeleterun_scripts/run_python_vs_fortran_cases.pyaddtests/test_fatal_error_handling.pydeleterun_scripts/create_multi_col_params.pydeleterun_scripts/run_scm.bashdeleterun_scripts/run_silhs_test.pydeleterun_scripts/run_bindiff_varying_flags_output.pyeditjenkins_tests/run_bindiff_w_varying_flags_against_master/Jenkinsfileeditrun_scripts/run_bindiff_all.pyeditrun_scripts/READMEdeleterun_scripts/run_clubb_and_pyplotgen.basheditjenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfileeditjenkins_tests/clubb_fire_tuning_gfortran_test/Jenkinsfiledeleterun_scripts/run_G_unit_tests.bashaddtests/run_jax_vs_fortran_cases.pydeleterun_scripts/RUN_CASESeditjenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfiledeleterun_scripts/run_clubb_conv_test.basheditrun_scripts/run_clubb_w_varying_flags.pyaddinput/flag_sets/run_bindiff_w_flags_config_host_flags.jsondeleterun_scripts/run_bindiff_all.basheditpostprocessing/pyplotgen/pyplotgen.pyaddtests/run_clubb_conv_test.pydeleterun_scripts/ensemble_run/READMEeditrun_scripts/run_tuner.pydeleterun_scripts/fire_tuner.pydeleterun_scripts/create_case_namelist.pydeleterun_scripts/run_bindiff_w_flags_config_example.jsondeleterun_scripts/test_fatal_error_handling.basheditsrc/CMakeLists.txtdeleterun_scripts/ensemble_run/output/.gitignoreedittuner/tuning_worker.pyeditclubb_jax/README.mddeleterun_scripts/run_scm_debug.bashedittuner/test_tuning_strategy.pyadddash_app/fill_holes.pydeleterun_scripts/run_stats_output_consistency.pydeleterun_scripts/run_timestep_tests.basheditjenkins_tests/clubb_check_budget_balance_gfortran/Jenkinsfiledeleterun_scripts/run_clubb_conv_test.pydeletejenkins_tests/clubb_uninit_var_oracle_test/Jenkinsfiledeleterun_scripts/run_G_unit_tests.pydeleterun_scripts/test_fatal_error_handling.pydeleterun_scripts/ensemble_run/ensembles/.gitignoreeditclubb_jax/JAX_CONVERSION_PLAN.mdeditrun_scripts/run_scm.pyeditpostprocessing/timestep_convergence_test.bashdeleterun_scripts/run_timestep_tests.pyeditjenkins_tests/clubb_G_unit_reverse_dir_grid_test/Jenkinsfiledeleterun_scripts/check_mirrored_multi_col_output.pydeleterun_scripts/diff_netcdf_outputs.pydeleterun_scripts/run_scm_collect.basheditjenkins_tests/clubb_python_test/Jenkinsfileeditjenkins_tests/clubb_silhs_convergence_gfortran/Jenkinsfiledeleterun_scripts/fill_holes.pyeditjenkins_tests/clubb_timestep_gfortran_tests/Jenkinsfileedittuner/paths.pydeleterun_scripts/run_bindiff_w_flags_requirements.txtaddtests/run_stats_output_consistency.pyeditjenkins_tests/clubb_stats_output_consistency_gfortran_test/Jenkinsfiledeleterun_scripts/run_benchmark_converter_test.pydeletejenkins_tests/clubb_cmake_output_matching/Jenkinsfiledeleterun_scripts/check_multi_col_error.pyeditLLM_prompts/update_python_api_and_drivers.mddeleterun_scripts/ensemble_run/ensemble_setup.bashaddtests/check_mirrored_multi_col_output.pydeleterun_scripts/ensemble_run/ensemble_run.bashaddtests/check_budget_balance.pyaddtests/READMEdeleterun_scripts/run_bindiff_w_flags_config_core_flags.jsondeleterun_scripts/run_thread_test.basheditpostprocessing/latin_hypercube_plotting/variance_analysis_scripts/rms_vs_sample_points/silhs_varying_sp_output.shaddtests/run_benchmark_converter_test.pyaddtests/run_silhs_test.pyaddutilities/create_case_namelist.pyaddrun_scripts/run_clubb_and_pyplotgen.pyeditrun_scripts/run_scm_loss.pydeleterun_scripts/check_budget_balance.pydeleterun_scripts/run_bindiff_w_flags_config_host_flags.jsonaddtests/run_G_unit_tests.pyaddtests/run_python_vs_fortran_cases.pydeleterun_scripts/run_silhs_test.bashdeletesrc/int2txt.F90deleterun_scripts/run_tuner.bashdeleterun_scripts/ensemble_run/input/.gitignoredeleterun_scripts/run_scm_all.bashaddtests/run_timestep_tests.pydeleterun_scripts/test_monoflux_limiter_GPU.pydeleterun_scripts/run_loss_output_consistency.pyeditjenkins_tests/clubb_restart_gfortran_test/Jenkinsfileeditjenkins_tests/clubb_nvhpc_gpu_column_mirror_test/Jenkinsfiledeleterun_scripts/run_restart_test.pydeleterun_scripts/generate_seed.bashaddutilities/create_multi_col_params.pyaddinput/flag_sets/run_bindiff_w_flags_config_core_flags.jsoneditjenkins_tests/clubb_restart_silhs_gfortran_test/Jenkinsfileeditclubb_python_driver/README.mdaddtests/run_bindiff_w_flags.pyeditREADMEeditjenkins_tests/clubb_generalized_vertical_grid_test/Jenkinsfileeditsrc/generalized_grid_test.F90editjenkins_tests/clubb_timestep_convergence_gfortran_test/Jenkinsfiledeleterun_scripts/run_thread_test.pyeditjenkins_tests/clubb_generalized_vert_grid_host_flags/Jenkinsfiledeleterun_scripts/run_jax_vs_fortran_cases.pyaddtests/run_loss_output_consistency.pydeleterun_scripts/time_scm_all.bashrun_scripts/READMEsrc/CMakeLists.txtsrc/jacobian.F90run_scripts/run_jacobian.bashinput_misc/jacobian.inREADME5512bff0caa1b179b2a03a5512fc3de2c866b0cb1782441296000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving jacobian code - it has not worked in a long time 2026-06-25 21:34:56 -05005512bff0caa1b179b2a03a5512fc3de2c866b0cbRemoving jacobian code - it has not worked in a long timedeleterun_scripts/run_jacobian.basheditrun_scripts/READMEdeletesrc/jacobian.F90editsrc/CMakeLists.txtdeleteinput_misc/jacobian.ineditREADMEsrc/Input_fields/recl.ince1ca53920f7095d09c5dde5b9502f4056c481b481782441838000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving recl.inc, just dead code for an outdated issue 2026-06-25 21:43:58 -0500e1ca53920f7095d09c5dde5b9502f4056c481b48Removing recl.inc, just dead code for an outdated issuedeletesrc/Input_fields/recl.incsrc/CLUBB_core/lapack_wrap.F900ed15803474cd7d3d8228a642e9e2599a840707d1782442179000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving ifdefs that are only for E3SM and only on a specific machine 2026-06-25 21:49:39 -05000ed15803474cd7d3d8228a642e9e2599a840707dRemoving ifdefs that are only for E3SM and only on a specific machineeditsrc/CLUBB_core/lapack_wrap.F90src/CLUBB_core/advance_clubb_core_module.F90src/generalized_grid_test.F90src/CLUBB_core/clubb_api_module.F90src/CLUBB_core/mixing_length.F9086f7a6081cc525e6d953cebc42d4e5962d7e24f21782443428000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving the CLUBBND_CAM option, not sure what it was for, it's not defined in this repo or any of our host model repos 2026-06-25 22:10:28 -050086f7a6081cc525e6d953cebc42d4e5962d7e24f2Removing the CLUBBND_CAM option, not sure what it was for, it's not defined in this repo or any of our host model reposeditsrc/CLUBB_core/clubb_api_module.F90editsrc/generalized_grid_test.F90editsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/CLUBB_core/mixing_length.F90src/generalized_grid_test.F90src/CLUBB_core/pdf_closure_module.F90clubb_python_api/f2py_fortran_wrappers/pdf_closure_module_wrapper.F90src/Input_fields/input_fields.F90clubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyclubb_python_api/tests/test_call_tree_pdf_closure_driver.pysrc/Microphys/pdf_hydromet_microphys_wrapper.F90src/CLUBB_core/advance_clubb_core_module.F90src/CLUBB_core/advance_windm_edsclrm_module.F90src/clubb_driver.F90clubb_python_driver/advance_clubb_core.pyclubb_python_api/f2py_fortran_wrappers/advance_windm_edsclrm_module_wrapper.F90clubb_python_api/clubb_f2py.pyfclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyclubb_python_api/clubb_python/CLUBB_core/advance_windm_edsclrm.py955aa780e3a47b6accf7af68d85f76ad53baff391782445585000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRemoving unused variables 2026-06-25 22:46:25 -0500955aa780e3a47b6accf7af68d85f76ad53baff39Removing unused variableseditclubb_python_api/f2py_fortran_wrappers/advance_windm_edsclrm_module_wrapper.F90editclubb_python_api/clubb_python/CLUBB_core/pdf_closure.pyeditclubb_python_driver/advance_clubb_core.pyeditclubb_python_api/clubb_python/CLUBB_core/advance_windm_edsclrm.pyeditsrc/clubb_driver.F90editclubb_python_api/clubb_f2py.pyfeditsrc/Microphys/pdf_hydromet_microphys_wrapper.F90editclubb_python_api/f2py_fortran_wrappers/pdf_closure_module_wrapper.F90editclubb_python_api/tests/test_call_tree_advance_windm_edsclrm.pyeditclubb_python_api/tests/test_call_tree_pdf_closure_driver.pyeditsrc/CLUBB_core/advance_windm_edsclrm_module.F90editsrc/CLUBB_core/advance_clubb_core_module.F90editsrc/CLUBB_core/pdf_closure_module.F90editsrc/generalized_grid_test.F90editsrc/Input_fields/input_fields.F90githttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyhttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse11http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/11/9http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/9/Started by an SCM change92ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fb2ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fbrefs/remotes/origin/master2ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fb2ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fbrefs/remotes/origin/master2ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fb2ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fbrefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#924525072366725clubb_gpu_async_output_matching #99false95170SUCCESS1782289690466http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/9/README2ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fb1782247864000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduRecently clubb_BFB_varying_flags_gfortran_test failed due to a script bug, dispite it being BFB. RESOLVED:2a334f87922dfaceb7d3a37b1924d374f1b986d5 2026-06-23 15:51:04 -05002ca3ddc3ece9ae81f9b9acc08d3be93c4aab01fbRecently clubb_BFB_varying_flags_gfortran_test failed due to a script bug, dispite it being BFB. RESOLVED:2a334f87922dfaceb7d3a37b1924d374f1b986d5editREADMEgithttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse10http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/10/8http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/8/Started by an SCM change82a334f87922dfaceb7d3a37b1924d374f1b986d52a334f87922dfaceb7d3a37b1924d374f1b986d5refs/remotes/origin/master2a334f87922dfaceb7d3a37b1924d374f1b986d52a334f87922dfaceb7d3a37b1924d374f1b986d5refs/remotes/origin/master2a334f87922dfaceb7d3a37b1924d374f1b986d52a334f87922dfaceb7d3a37b1924d374f1b986d5refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#825006602366725clubb_gpu_async_output_matching #88false85052SUCCESS1781771287425http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/8/src/CLUBB_core/pdf_closure_module.F90clubb_python_api/clubb_python/clubb_api.pydash_app/assets/37_run_console_state.jsdash_app/tune_tab/__init__.pyclubb_python_api/f2py_fortran_wrappers/stats_netcdf_wrapper.F90dash_app/assets/13_tab_tune_theme.csssrc/clubb_loss_driver_test.F90dash_app/tune_tab/callbacks_display.pydash_app/run_tab/callbacks_console.pysrc/CLUBB_core/error_code.F90tuner/clubb_loss_driver.pydash_app/plot_tab/profile_loss.pytuner/taylor_metrics.pyrun_scripts/run_scm_loss.pysrc/clubb_driver_test.F90tuner/case_defaults.jsonrun_scripts/run_benchmark_converter_test.pyclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pydash_app/tune_tab/tab.pydash_app/plot_tab/plot_types/shared.pydash_app/tune_tab/runtime.pytuner/clubb_loss_driver_test.pytuner/tune_clubb.pytuner/tuning_worker.pyutilities/loss_metrics.pyrun_scripts/create_case_namelist.pyjenkins_tests/LLM_FAILURE_AUTOMATION_DESIGN.mdtuner/paths.pysrc/SILHS/latin_hypercube_driver_module.F90tuner/status.pydash_app/run_tab/layout.pydash_app/plot_tab/benchmark_overlay.pyclubb_python_driver/clubb_case_initalization.pyrun_scripts/create_multi_col_params.pyrun_scripts/run_loss_output_consistency.pydash_app/plot_tab/callbacks_grid.pysrc/CLUBB_core/clubb_api_module.F90dash_app/tune_tab/callbacks_runs.pydash_app/tune_tab/layout.pyclubb_python_api/clubb_f2py.pyfdash_app/requirements.txtdash_app/tune_tab/discovery.pyjenkins_tests/clubb_new_tuner_test/Jenkinsfilerun_scripts/run_tuner_job.pytuner/case_defaults.pydash_app/plot_tab/plot_types/timeheight_plot.pydash_app/assets/36_tune_ui_resize.jsdash_app/plot_tab/state.pytuner/job_runtime.pyutilities/__init__.pytuner/test_tuning_strategy.pysrc/CLUBB_core/stats_netcdf.F90tuner/__init__.pydash_app/tune_tab/callbacks_settings.pydash_app/README.mdtuner/tuning_strategy.pyrun_scripts/run_stats_output_consistency.pytuner/request.pyutilities/benchmark_converter.pydash_app/plot_tab/plot_types/budget_plot.pyclubb_python_api/clubb_python/_runtime_loader.pydash_app/plot_tab/layout.pyclubb_python_api/clubb_python/CLUBB_core/loss_driver.pydash_app/plot_tab/callbacks_controls.pydash_app/plot_tab/callbacks_params.pyclubb_python_api/f2py_fortran_wrappers/clubb_loss_driver_wrapper.F90dash_app/app.pyjenkins_tests/clubb_stats_output_consistency_gfortran_test/Jenkinsfileclubb_python_api/clubb_python/__init__.pydash_app/plot_tab/plot_types/profile_plot.pyclubb_python_driver/advance_clubb_to_end.pyrun_scripts/run_scm.pysrc/clubb_standalone_loss.F90dash_app/plot_tab/plot_types/subcolumn_plot.pyrun_scripts/run_bindiff_all.pysrc/clubb_driver.F90READMEtuner/tuning_scheduler.pydash_app/assets/12_tab_plots_theme.csssrc/CMakeLists.txttuner/README.mddash_app/plot_tab/callbacks_case.pysrc/clubb_loss_driver.F90dash_app/tune_tab/state.py2a334f87922dfaceb7d3a37b1924d374f1b986d51781756186000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comClubb loss driver (#1303) * First set of commits for the new loss driver. * Improvements * Batching capabilities * Lot's of cleanup, simplifications, and consolidation * More testing * Python interfaces for the loss driver * Interface for tuner and tuner with modes. * Nice updates * Missed file * Little updates to fix inconsistencies in the plots and averaging ranges * Adding a script that converts sam and coamps netcdf files to a clubb named version, including things that need to be calculated. This fixes a bug where fields were being averaged before being calculated, see https://github.com/larson-group/clubb/issues/1284, but is currently only wired up in the new tuner and the dash app plotter * Making some things public for nvhpc * Organization and consistency test fix * Adding taylor diagram to tune tab, this needs taylor metrics to be computed so the loss driver needed to output this info. * Adding more fancy loss functions based on Taylor metrics and a way to switch how the loss is computed in the dash tuner * Making NaN in code not an issue * Mostly dash app improvements to plotting, also made subwindows for tuning * Tuner tracking by case * Removing stats time-variance code * Simplifying loss driver output - now loss metrics are output explicitly rather than as packaged taylor_metrics and having different versions for subwindows and such * Mainly ui updates and small simplifications * Improving comments and cleaning things up a bit * Removing strictness on stats window vs output interval, and adding a stats consistency test to tests for issues with batch size and output frequency and the windowing mode * Fixing openmp bug and making incomplete stats intervals not output, as it was before * Making jenkins test use standard stats, and fixing tiny bug that caused error running with debug+no rcp2 stats * Adding gate around bindiff, there's an edge case where a cosmetic diff can trigger a full-diff even in a failed case, which should otherwise be considered BFB and skipped. * Adding some README entries for the dash app and a python requirements file * Adding comments and little bug fix to dash app * Update to loss consistency test, making it simpler since stats consistency test covers most things. Also adding it to the stats consistency jenkins test since it is still similar * Cleanup and code consolidation, new jenkins test for tuner * Adding comments * Fixing little bugs * Slight improvement to stats_api * Small bug fix * Consolidating stats time setting 2026-06-17 23:16:26 -05002a334f87922dfaceb7d3a37b1924d374f1b986d5Clubb loss driver (#1303)adddash_app/assets/36_tune_ui_resize.jseditdash_app/assets/12_tab_plots_theme.cssadddash_app/tune_tab/layout.pyeditdash_app/plot_tab/layout.pyeditdash_app/plot_tab/plot_types/shared.pyeditdash_app/plot_tab/callbacks_case.pyaddrun_scripts/create_case_namelist.pyaddtuner/taylor_metrics.pyaddtuner/tuning_scheduler.pyeditrun_scripts/create_multi_col_params.pyaddclubb_python_api/clubb_python/CLUBB_core/loss_driver.pyeditdash_app/plot_tab/plot_types/budget_plot.pyadddash_app/requirements.txtaddtuner/tuning_strategy.pyadddash_app/tune_tab/callbacks_settings.pyaddtuner/request.pyadddash_app/assets/13_tab_tune_theme.cssaddtuner/job_runtime.pyaddtuner/test_tuning_strategy.pyadddash_app/tune_tab/__init__.pyadddash_app/tune_tab/runtime.pyeditdash_app/run_tab/callbacks_console.pyeditsrc/CLUBB_core/stats_netcdf.F90addtuner/clubb_loss_driver.pyadddash_app/assets/37_run_console_state.jseditsrc/clubb_driver.F90addtuner/paths.pyaddutilities/__init__.pyeditclubb_python_api/clubb_f2py.pyfeditdash_app/plot_tab/state.pyaddtuner/clubb_loss_driver_test.pyaddutilities/benchmark_converter.pyeditrun_scripts/run_scm.pyaddsrc/clubb_standalone_loss.F90addtuner/tune_clubb.pyaddtuner/tuning_worker.pyaddjenkins_tests/clubb_new_tuner_test/Jenkinsfileaddrun_scripts/run_tuner_job.pyeditdash_app/plot_tab/plot_types/timeheight_plot.pyeditdash_app/app.pyeditsrc/CLUBB_core/pdf_closure_module.F90editclubb_python_api/f2py_fortran_wrappers/stats_netcdf_wrapper.F90addrun_scripts/run_benchmark_converter_test.pyaddrun_scripts/run_stats_output_consistency.pyeditsrc/CMakeLists.txtadddash_app/plot_tab/profile_loss.pyeditclubb_python_driver/clubb_case_initalization.pyaddrun_scripts/run_loss_output_consistency.pyaddsrc/clubb_loss_driver.F90adddash_app/tune_tab/state.pyeditclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyaddtuner/case_defaults.pyeditsrc/clubb_driver_test.F90editclubb_python_api/clubb_python/clubb_api.pyeditdash_app/plot_tab/callbacks_grid.pyeditdash_app/plot_tab/plot_types/subcolumn_plot.pyadddash_app/README.mdeditdash_app/plot_tab/benchmark_overlay.pyeditrun_scripts/run_bindiff_all.pyeditclubb_python_driver/advance_clubb_to_end.pyaddrun_scripts/run_scm_loss.pyaddtuner/__init__.pyaddtuner/status.pyadddash_app/tune_tab/tab.pyeditREADMEeditclubb_python_api/clubb_python/__init__.pyeditdash_app/plot_tab/callbacks_params.pyaddtuner/case_defaults.jsoneditdash_app/run_tab/layout.pyaddjenkins_tests/LLM_FAILURE_AUTOMATION_DESIGN.mdaddsrc/clubb_loss_driver_test.F90adddash_app/tune_tab/discovery.pyeditsrc/CLUBB_core/error_code.F90addutilities/loss_metrics.pyeditdash_app/plot_tab/plot_types/profile_plot.pyeditsrc/CLUBB_core/clubb_api_module.F90addjenkins_tests/clubb_stats_output_consistency_gfortran_test/Jenkinsfileaddclubb_python_api/clubb_python/_runtime_loader.pyaddtuner/README.mdadddash_app/tune_tab/callbacks_display.pyaddclubb_python_api/f2py_fortran_wrappers/clubb_loss_driver_wrapper.F90editsrc/SILHS/latin_hypercube_driver_module.F90adddash_app/tune_tab/callbacks_runs.pyeditdash_app/plot_tab/callbacks_controls.pygithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse9http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/9/7http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/7/Started by an SCM change7d4fbf466f74b11ca7b5a81575427768beebc3f5bd4fbf466f74b11ca7b5a81575427768beebc3f5brefs/remotes/origin/masterd4fbf466f74b11ca7b5a81575427768beebc3f5bd4fbf466f74b11ca7b5a81575427768beebc3f5brefs/remotes/origin/masterd4fbf466f74b11ca7b5a81575427768beebc3f5bd4fbf466f74b11ca7b5a81575427768beebc3f5brefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#727836232366725clubb_gpu_async_output_matching #77false74908SUCCESS1781684888833http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/7/src/clubb_driver.F90d4fbf466f74b11ca7b5a81575427768beebc3f5b1781661933000http://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerhuebler@uwm.eduFixing bug that caused incorrect times to be written to netcdf in cases where stats_tout (output interval) > dt_main (timestep). This is BIT_CHANGING because of that, but only for the time variable (no field differences), and only for cases where we don't output each timestep. 2026-06-16 21:05:33 -0500d4fbf466f74b11ca7b5a81575427768beebc3f5bFixing bug that caused incorrect times to be written to netcdf in cases where stats_tout (output interval) > dt_main (timestep). This is BIT_CHANGING because of that, but only for the time variable (no field differences), and only for cases where we don't output each timestep.editsrc/clubb_driver.F90githttp://carson.math.uwm.edu/jenkins/user/hueblerGunther Hueblerfalse8http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/8/6http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/6/Started by an SCM change6a38df744233769a1888462f2616bd9d8c007fcf5a38df744233769a1888462f2616bd9d8c007fcf5refs/remotes/origin/mastera38df744233769a1888462f2616bd9d8c007fcf5a38df744233769a1888462f2616bd9d8c007fcf5refs/remotes/origin/mastera38df744233769a1888462f2616bd9d8c007fcf5a38df744233769a1888462f2616bd9d8c007fcf5refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#646576702366725clubb_gpu_async_output_matching #66false64790SUCCESS1781252887586http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/6/jenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfilea38df744233769a1888462f2616bd9d8c007fcf51781191186000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate Jenkinsfile to match moved file - utilities/convert_acc_to_omp.bash 2026-06-11 10:19:46 -0500a38df744233769a1888462f2616bd9d8c007fcf5Update Jenkinsfile to match moved fileeditjenkins_tests/clubb_nvhpc_gpu_vs_cpu_diffness/Jenkinsfilegithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse7http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/7/5http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/5/Started by an SCM 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#55false54709SUCCESS1781166488005http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/5/compile/config/linux_x86_64_ifort_compy.bashutilities/convert_acc_to_omp.bashcompile/file_list/jacobian_filescompile/file_list/clubb_parabolic_filesdocs/license.htmlcompile/config/linux_x86_64_ifort_optimizing.bashcompile/config/READMEcompile/clean_all.bashcompile/config/linux_x86_64_ifort_r4.bashcompile/config/linux_x86_64_gfortran_ubuntu.bashcompile/config/linux_ia64_ifort.bashcompile/Makefilecompile/file_list/clubb_morrison_filescompile/compiler_tests.bashcompile/file_list/clubb_KK_microphys_filesobj/.gitignorecompile/config/linux_x86_64_nvhpc.bashcompile/mkmfdocs/about.htmlcompile/config/linux_x86_64_oracle_debug.bashcompile/config/linux_x86_64_ifort_debug.bashdocs/images/static/pgbk.gifcompile/config/linux_x86_64_ifort_anvil.bashcompile/file_list/clubb_bugsrad_filescompile/config/macosx_x86_64_gfortran.bashcompile/file_list/int2txt_filesdocs/images/dynamic/buttonset1/subnav1hover.gifcompile/config/linux_x86_64_open64_debug.bashcompile/config/linux_x86_64_gfortran_NCAR.bashcompile/config/linux_x86_64_ifort_hd1.bashcompile/READMEcompile/config/linux_x86_64_gfortran.bashcompile/config/linux_x86_64_nvhpc_debug.bashdocs/index.htmlcompile/config/linux_x86_64_gfortran_debug.bashcompile/file_list/G_unit_tests_fileslib/.gitignoredocs/images/dynamic/key_visual1.jpgcompile/config/linux_x86_64_ifort_r4_debug.bashcompile/convert_acc_to_omp.bashcompile/config/linux_x86_64_absoft.bashcompile/config/linux_x86_64_ifort_hd1_debug.bashcompile/config/linux_x86_64_nvhpc_gpu_openmp.bashdocs/_config.ymlcompile/config/mswin_mingw_x86_gfortran.bashbin/.gitignoredocs/images/dynamic/buttonset1/subnav1.gifcompile/config/mswin_cygwin_i686_gfortran.bashcompile/config/linux_x86_64_cray_frontier.bashcompile/config/linux_x86_64_oracle_optimize.bashdocs/style/style.cssdocs/faq.htmlcompile/file_list/clubb_tuner_filescompile/config/linux_x86_64_ifort.bashcompile/config/linux_x86_64_open64.bashdocs/images/dynamic/buttonset1/n1activeitem.gifcompile/config/linux_x86_64_ifort_gpu_openmp.bashcompile/file_list/clubb_model_filescompile/config/gfdl_wks.bashcompile/config/linux_x86_64_gfortran_compy.bashdocs/style/colorscheme.csscompile/config/linux_x86_64_gfortran_hd1.bashcompile/config/solaris_generic_oracle.bashcompile/config/linux_x86_64_nvhpc_gpu_openacc.bashdocs/style/main.csscompile/file_list/clubb_standalone_filescompile/compile.bashcompile/file_list/clubb_thread_test_filescompile/config/linux_x86_64_gfortran_r4.bashbeffd89a659bcbddc72da2c23fa57ff0bd34a4241781117467000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comDeleted the old compile directory and docs directory (#1315) - The old mkmf/make compile directory, the bash based compile scripts are no longer needed now that we have CMake - Moved `convert_acc_to_omp.bash` to utilities/ directory - The docs directory had an old copy of the website, but the website is backed up to a local drive on Carson 2026-06-10 13:51:07 -0500beffd89a659bcbddc72da2c23fa57ff0bd34a424Deleted the old compile directory and docs directory (#1315)deletecompile/file_list/G_unit_tests_filesdeletecompile/Makefileaddutilities/convert_acc_to_omp.bashdeletecompile/config/linux_x86_64_ifort_compy.bashdeletecompile/config/linux_x86_64_ifort_gpu_openmp.bashdeletecompile/config/macosx_x86_64_gfortran.bashdeletecompile/file_list/clubb_standalone_filesdeletecompile/config/linux_x86_64_gfortran_ubuntu.bashdeletecompile/compile.bashdeletecompile/config/linux_x86_64_ifort_r4_debug.bashdeletecompile/config/linux_x86_64_open64.bashdeletecompile/convert_acc_to_omp.bashdeletecompile/clean_all.bashdeletecompile/file_list/clubb_model_filesdeletecompile/config/gfdl_wks.bashdeletecompile/file_list/clubb_morrison_filesdeletecompile/config/linux_x86_64_nvhpc_debug.bashdeletecompile/file_list/int2txt_filesdeletedocs/faq.htmldeletecompile/file_list/clubb_bugsrad_filesdeletecompile/config/linux_x86_64_ifort_hd1_debug.bashdeletecompile/file_list/clubb_tuner_filesdeletecompile/config/linux_x86_64_oracle_debug.bashdeletecompile/READMEdeletecompile/config/linux_x86_64_ifort_optimizing.bashdeletecompile/config/linux_x86_64_gfortran_compy.bashdeletedocs/images/dynamic/buttonset1/n1activeitem.gifdeletecompile/config/linux_x86_64_nvhpc.bashdeletecompile/file_list/clubb_thread_test_filesdeletecompile/config/mswin_cygwin_i686_gfortran.bashdeletecompile/config/linux_x86_64_gfortran_r4.bashdeletedocs/license.htmldeletedocs/style/main.cssdeletecompile/mkmfdeletedocs/style/style.cssdeletecompile/config/linux_x86_64_ifort_debug.bashdeletecompile/config/linux_x86_64_gfortran_debug.bashdeletecompile/config/linux_x86_64_cray_frontier.bashdeletecompile/compiler_tests.bashdeletedocs/style/colorscheme.cssdeletecompile/file_list/clubb_KK_microphys_filesdeletecompile/file_list/jacobian_filesdeletecompile/config/READMEdeletecompile/config/linux_x86_64_absoft.bashdeletecompile/config/linux_x86_64_nvhpc_gpu_openacc.bashdeletedocs/images/static/pgbk.gifdeletecompile/config/linux_x86_64_ifort_anvil.bashdeletecompile/config/solaris_generic_oracle.bashdeletelib/.gitignoredeleteobj/.gitignoredeletecompile/config/linux_x86_64_ifort_hd1.bashdeletecompile/config/linux_x86_64_oracle_optimize.bashdeletecompile/config/linux_x86_64_ifort.bashdeletecompile/config/linux_x86_64_nvhpc_gpu_openmp.bashdeletedocs/_config.ymldeletecompile/config/linux_x86_64_ifort_r4.bashdeletecompile/config/linux_ia64_ifort.bashdeletedocs/images/dynamic/buttonset1/subnav1.gifdeletedocs/images/dynamic/buttonset1/subnav1hover.gifdeletecompile/config/linux_x86_64_gfortran_hd1.bashdeletecompile/config/mswin_mingw_x86_gfortran.bashdeletedocs/index.htmldeletecompile/config/linux_x86_64_open64_debug.bashdeletecompile/config/linux_x86_64_gfortran.bashdeletecompile/config/linux_x86_64_gfortran_NCAR.bashdeletedocs/images/dynamic/key_visual1.jpgdeletebin/.gitignoredeletedocs/about.htmldeletecompile/file_list/clubb_parabolic_filesBUILD.mdpostprocessing/pyplotgen/README.mdREADMEcompile.pyf6b2bf7d9b01b55a68c5101649d8a157ee17921f1781120524000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comUpdate README, BUILD.md, and pyplotgen README.md (#1309) 2026-06-10 14:42:04 -0500f6b2bf7d9b01b55a68c5101649d8a157ee17921fUpdate README, BUILD.md, and pyplotgen README.md (#1309)editBUILD.mdeditREADMEeditcompile.pyeditpostprocessing/pyplotgen/README.mdgithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse6http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/6/4http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/4/Started by an SCM change47945eaacac73eb9bbf7dc2b21dd6187c724a8fbf7945eaacac73eb9bbf7dc2b21dd6187c724a8fbfrefs/remotes/origin/master7945eaacac73eb9bbf7dc2b21dd6187c724a8fbf7945eaacac73eb9bbf7dc2b21dd6187c724a8fbfrefs/remotes/origin/master7945eaacac73eb9bbf7dc2b21dd6187c724a8fbf7945eaacac73eb9bbf7dc2b21dd6187c724a8fbfrefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#431842212366725clubb_gpu_async_output_matching 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outdated Matlab files (#1313) - Removed plotting, utility, and post-processing Matlab scripts 2026-06-09 14:30:35 -0500e969f3be4e23a0ed4932c6c7c34baa05cca9e136Removed/deleted outdated Matlab files 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GrADS (.ctl, .dat) file format and reference to it (#1310) - Made updates to Input Fields to remove GrADS. Master branch only worked for a small number of input variables, and after the changes when testing, worked just as well as the master branch. 2026-06-09 14:48:03 -05007945eaacac73eb9bbf7dc2b21dd6187c724a8fbfRemoved/Deleted GrADS (.ctl, .dat) file format and reference to it 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by user Trevor HancockhancockTrevor Hancock3039f9da10548eff43e3aa9c2d928cbed34689600039f9da10548eff43e3aa9c2d928cbed34689600refs/remotes/origin/master039f9da10548eff43e3aa9c2d928cbed34689600039f9da10548eff43e3aa9c2d928cbed34689600refs/remotes/origin/master039f9da10548eff43e3aa9c2d928cbed34689600039f9da10548eff43e3aa9c2d928cbed34689600refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#370175312366725clubb_gpu_async_output_matching #33false34491SUCCESS1780693607612http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/3/utilities/CLUBBStandardsCheck.plutilities/README039f9da10548eff43e3aa9c2d928cbed346896001780693246000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comRemoved perl and references to it (#1311) * Removed perl and references to it * Reverting changes to files/directories as requested 2026-06-05 16:00:46 -0500039f9da10548eff43e3aa9c2d928cbed34689600Removed perl and references to it 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plotgen (#1312) * Removed entire plotgen directory 2026-06-04 13:47:50 -050053893cabfda88eccc92204a3471b3855a4716aa6Removed plotgen 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#3737false378063SUCCESS1788683289552http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/37/src/Microphys/KK_microphys/CMakeLists.txtsrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90src/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90src/Microphys/KK_microphys_module.F90src/SILHS/CMakeLists.txtsrc/CLUBB_core/stats_netcdf.F90src/Microphys/pdf_hydromet_microphys_wrapper.F90src/Microphys/advance_microphys_module.F90src/Microphys/lh_microphys_driver_module.F90src/Microphys/KK_microphys/KK_upscaled_covariances.F90src/Microphys/ice_dfsn_module.F90src/SILHS/est_kessler_microphys_module.F90src/Microphys/microphys_interface.incsrc/Microphys/cloud_sed_module.F90src/CLUBB_core/stats_clubb_utilities.F90src/SILHS/math_utilities.F90src/Microphys/estimate_scm_microphys_module.F90src/Microphys/CMakeLists.txtsrc/Microphys/Morrison_microphys/CMakeLists.txtsrc/SILHS/silhs_api_module.F90src/Microphys/mixed_moment_PDF_integrals.F90src/SILHS/latin_hypercube_driver_module.F90tests/run_silhs_test.pysrc/Microphys/morrison_microphys_module.F90src/Microphys/gfdl_activation.F90src/CLUBB_core/advance_xp2_xpyp_module.F90src/SILHS/lh_microphys_var_covar_module.F90src/clubb_driver.F90src/Microphys/silhs_category_variance_module.F90src/CLUBB_core/fill_holes.F90src/Microphys/microphys_driver.F90src/Radiation/radiation_module.F90src/Microphys/Microphys_utils/CMakeLists.txt900681c91bdbdf8d6cd069bab01663ebac1a32791788666832000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMicrophys loop push (#1355) * First set of loop pushes - feature addition to stats too to allow for calling stats_update multiple times in a timestep and averaging the results, which is quite nice for silhs and allows us to get rid of the special microphysics stats type * More loop pushes * Tiny changes to restore BFBness * Pushing loop into advance_microphys * Little more loop push * More basic loop pushing * More loop pushing, also found what seems to be a bug with additional columns, theres code that uses only the first one. Im leaving this in for now to maintain BFBness, but labeled the problem areas with TODOs * Potentially final batch of loop pushes * Adding acc fixes for microphys stuff - the 2D versions called are GPUized, so they need acc data statements surrounding them * Removing unneccesary single col versions of lots of things * Restoring some comments and formatting * A little more restoration, maybe unnecceary 2026-09-05 22:53:52 -0500900681c91bdbdf8d6cd069bab01663ebac1a3279Microphys loop push (#1355)editsrc/CLUBB_core/stats_netcdf.F90deletesrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90deletesrc/Microphys/Microphys_utils/CMakeLists.txteditsrc/Microphys/morrison_microphys_module.F90editsrc/clubb_driver.F90editsrc/Radiation/radiation_module.F90editsrc/Microphys/pdf_hydromet_microphys_wrapper.F90editsrc/SILHS/lh_microphys_var_covar_module.F90editsrc/Microphys/ice_dfsn_module.F90editsrc/SILHS/silhs_api_module.F90editsrc/Microphys/KK_microphys/CMakeLists.txteditsrc/Microphys/CMakeLists.txteditsrc/Microphys/silhs_category_variance_module.F90editsrc/SILHS/math_utilities.F90editsrc/SILHS/est_kessler_microphys_module.F90editsrc/Microphys/lh_microphys_driver_module.F90editsrc/SILHS/latin_hypercube_driver_module.F90editsrc/Microphys/gfdl_activation.F90editsrc/Microphys/mixed_moment_PDF_integrals.F90editsrc/Microphys/microphys_driver.F90editsrc/Microphys/KK_microphys/KK_upscaled_covariances.F90editsrc/Microphys/advance_microphys_module.F90editsrc/Microphys/estimate_scm_microphys_module.F90editsrc/Microphys/microphys_interface.inceditsrc/Microphys/cloud_sed_module.F90editsrc/CLUBB_core/stats_clubb_utilities.F90editsrc/Microphys/KK_microphys_module.F90edittests/run_silhs_test.pyeditsrc/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90editsrc/CLUBB_core/advance_xp2_xpyp_module.F90editsrc/SILHS/CMakeLists.txteditsrc/CLUBB_core/fill_holes.F90editsrc/Microphys/Morrison_microphys/CMakeLists.txtgithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse36http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/36/Started by an SCM change37900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/master900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/master900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3722183242366725clubb_gpu_async_output_matching #3737false378063SUCCESS1788683289552http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/37/src/Microphys/KK_microphys/CMakeLists.txtsrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90src/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90src/Microphys/KK_microphys_module.F90src/SILHS/CMakeLists.txtsrc/CLUBB_core/stats_netcdf.F90src/Microphys/pdf_hydromet_microphys_wrapper.F90src/Microphys/advance_microphys_module.F90src/Microphys/lh_microphys_driver_module.F90src/Microphys/KK_microphys/KK_upscaled_covariances.F90src/Microphys/ice_dfsn_module.F90src/SILHS/est_kessler_microphys_module.F90src/Microphys/microphys_interface.incsrc/Microphys/cloud_sed_module.F90src/CLUBB_core/stats_clubb_utilities.F90src/SILHS/math_utilities.F90src/Microphys/estimate_scm_microphys_module.F90src/Microphys/CMakeLists.txtsrc/Microphys/Morrison_microphys/CMakeLists.txtsrc/SILHS/silhs_api_module.F90src/Microphys/mixed_moment_PDF_integrals.F90src/SILHS/latin_hypercube_driver_module.F90tests/run_silhs_test.pysrc/Microphys/morrison_microphys_module.F90src/Microphys/gfdl_activation.F90src/CLUBB_core/advance_xp2_xpyp_module.F90src/SILHS/lh_microphys_var_covar_module.F90src/clubb_driver.F90src/Microphys/silhs_category_variance_module.F90src/CLUBB_core/fill_holes.F90src/Microphys/microphys_driver.F90src/Radiation/radiation_module.F90src/Microphys/Microphys_utils/CMakeLists.txt900681c91bdbdf8d6cd069bab01663ebac1a32791788666832000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMicrophys loop push (#1355) * First set of loop pushes - feature addition to stats too to allow for calling stats_update multiple times in a timestep and averaging the results, which is quite nice for silhs and allows us to get rid of the special microphysics stats type * More loop pushes * Tiny changes to restore BFBness * Pushing loop into advance_microphys * Little more loop push * More basic loop pushing * More loop pushing, also found what seems to be a bug with additional columns, theres code that uses only the first one. Im leaving this in for now to maintain BFBness, but labeled the problem areas with TODOs * Potentially final batch of loop pushes * Adding acc fixes for microphys stuff - the 2D versions called are GPUized, so they need acc data statements surrounding them * Removing unneccesary single col versions of lots of things * Restoring some comments and formatting * A little more restoration, maybe unnecceary 2026-09-05 22:53:52 -0500900681c91bdbdf8d6cd069bab01663ebac1a3279Microphys loop push (#1355)editsrc/CLUBB_core/stats_netcdf.F90deletesrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90deletesrc/Microphys/Microphys_utils/CMakeLists.txteditsrc/Microphys/morrison_microphys_module.F90editsrc/clubb_driver.F90editsrc/Radiation/radiation_module.F90editsrc/Microphys/pdf_hydromet_microphys_wrapper.F90editsrc/SILHS/lh_microphys_var_covar_module.F90editsrc/Microphys/ice_dfsn_module.F90editsrc/SILHS/silhs_api_module.F90editsrc/Microphys/KK_microphys/CMakeLists.txteditsrc/Microphys/CMakeLists.txteditsrc/Microphys/silhs_category_variance_module.F90editsrc/SILHS/math_utilities.F90editsrc/SILHS/est_kessler_microphys_module.F90editsrc/Microphys/lh_microphys_driver_module.F90editsrc/SILHS/latin_hypercube_driver_module.F90editsrc/Microphys/gfdl_activation.F90editsrc/Microphys/mixed_moment_PDF_integrals.F90editsrc/Microphys/microphys_driver.F90editsrc/Microphys/KK_microphys/KK_upscaled_covariances.F90editsrc/Microphys/advance_microphys_module.F90editsrc/Microphys/estimate_scm_microphys_module.F90editsrc/Microphys/microphys_interface.inceditsrc/Microphys/cloud_sed_module.F90editsrc/CLUBB_core/stats_clubb_utilities.F90editsrc/Microphys/KK_microphys_module.F90edittests/run_silhs_test.pyeditsrc/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90editsrc/CLUBB_core/advance_xp2_xpyp_module.F90editsrc/SILHS/CMakeLists.txteditsrc/CLUBB_core/fill_holes.F90editsrc/Microphys/Morrison_microphys/CMakeLists.txtgithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse36http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/36/Started by an SCM change14be5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterbe5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterbe5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1413884232366725clubb_gpu_async_output_matching #1414false145859FAILURE1783240090479http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/14/input_misc/tuner/error_rico.ininput_misc/tuner/error_gabls3_night.indash_app/plot_tab/case_definitions.pyclubb_python_api/clubb_python/CLUBB_core/lapack_interfaces.pyutilities/read_sam_moments/netcdf_var_collector.pyinput_misc/tuner/error_nov11_altocu.indash_app/assets/14_tab_compile_theme.cssinput_misc/tuner/error_dycoms2_rf01.ininput_misc/tuner/error_dycoms2_rf02_ds.inclubb_python_api/clubb_python/CLUBB_core/grid_class.pydash_app/compile_tab/callbacks.pyinput_misc/tuner/error_wangara.intuner/case_defaults.jsoninput_misc/tuner/error_dycoms2_rf02_do.inutilities/create_case_namelist.pyclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyinput_misc/tuner/error_dycoms2_rf02_nd.ininput_misc/tuner/error_arm.indash_app/compile_tab/runtime.pycmake/deps/GPTLDependency.cmakeclubb_python_api/tests/test_udt_return_contract.pydash_app/run_tab/layout.pyclubb_python_driver/io/sounding.pyclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyinput_misc/tuner/error_arm_97.inclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pydash_app/tune_tab/layout.pyinput_misc/tuner/error_fire.ininput_misc/tuner/error_gabls2.intuner/case_defaults.pyinput_misc/tuner/error_atex.intuner/job_runtime.pydash_app/compile_tab/discovery.pyclubb_python_api/clubb_python/prescribe_forcings.pydash_app/README.mdclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyinput_misc/tuner/error_four_cases.inpostprocessing/pyplotgen/config/Case_definitions.pydash_app/assets/11_tab_run_theme.cssclubb_python_api/CMakeLists.txtinput_misc/tuner/error_bomex.ininput_misc/tuner/error_bomex_fire.ininput/les_and_clubb_benchmark_runsdash_app/compile_tab/test_compile_tab_build_status.pyrun_scripts/run_scm.pyinput_misc/tuner/error_all.insrc/clubb_driver.F90input_misc/tuner/error_lba.inREADMEinput_misc/tuner/error_ticket_756.inbe5e217cd91196f514fb60f9668106e072c14c1b1783222022000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comTiny dash updates (#1327) * Cross-platform updates to help with running on Macs mainly. The biggest difference is that now our code expects the les data in input/, and I've added a symlink that points to the normal pub directory for it. This makes everything work the same, but also makes it so someone can download the les data and store it anywhere, then just change the symlink. * Little UI improvements * Small UI fix * Small fix needed for a different python version and a little UI update * Another tiny cross platform fix * Updating build removal method and adding a mac specific bit for GPTL compiling that fixes environment issues * Removing accidentally added file 2026-07-04 22:27:02 -0500be5e217cd91196f514fb60f9668106e072c14c1bTiny dash updates (#1327)editclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyeditinput_misc/tuner/error_bomex.ineditdash_app/compile_tab/runtime.pyeditinput_misc/tuner/error_dycoms2_rf02_nd.ineditutilities/read_sam_moments/netcdf_var_collector.pyeditsrc/clubb_driver.F90editinput_misc/tuner/error_fire.ineditrun_scripts/run_scm.pyeditdash_app/README.mdeditinput_misc/tuner/error_dycoms2_rf01.ineditinput_misc/tuner/error_nov11_altocu.ineditclubb_python_api/clubb_python/CLUBB_core/lapack_interfaces.pyeditinput_misc/tuner/error_dycoms2_rf02_ds.ineditinput_misc/tuner/error_dycoms2_rf02_do.ineditclubb_python_api/CMakeLists.txteditdash_app/compile_tab/discovery.pyeditdash_app/tune_tab/layout.pyeditinput_misc/tuner/error_gabls2.ineditcmake/deps/GPTLDependency.cmakeeditclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyeditdash_app/assets/11_tab_run_theme.csseditinput_misc/tuner/error_wangara.ineditclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pyeditclubb_python_api/tests/test_udt_return_contract.pyeditREADMEeditutilities/create_case_namelist.pyeditdash_app/run_tab/layout.pyeditinput_misc/tuner/error_atex.ineditinput_misc/tuner/error_gabls3_night.ineditinput_misc/tuner/error_bomex_fire.inaddinput/les_and_clubb_benchmark_runseditinput_misc/tuner/error_lba.ineditinput_misc/tuner/error_rico.ineditclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyeditdash_app/assets/14_tab_compile_theme.cssedittuner/case_defaults.jsoneditinput_misc/tuner/error_arm_97.inadddash_app/compile_tab/test_compile_tab_build_status.pyedittuner/job_runtime.pyedittuner/case_defaults.pyeditinput_misc/tuner/error_ticket_756.ineditinput_misc/tuner/error_all.ineditclubb_python_driver/io/sounding.pyeditclubb_python_api/clubb_python/CLUBB_core/grid_class.pyeditclubb_python_api/clubb_python/prescribe_forcings.pyeditdash_app/plot_tab/case_definitions.pyeditinput_misc/tuner/error_arm.ineditinput_misc/tuner/error_four_cases.ineditdash_app/compile_tab/callbacks.pyeditpostprocessing/pyplotgen/config/Case_definitions.pygithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse15http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/15/13http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/13/Started by an SCM change37900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/master900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/master900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3722183242366725clubb_gpu_async_output_matching #3737false378063SUCCESS1788683289552http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/37/src/Microphys/KK_microphys/CMakeLists.txtsrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90src/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90src/Microphys/KK_microphys_module.F90src/SILHS/CMakeLists.txtsrc/CLUBB_core/stats_netcdf.F90src/Microphys/pdf_hydromet_microphys_wrapper.F90src/Microphys/advance_microphys_module.F90src/Microphys/lh_microphys_driver_module.F90src/Microphys/KK_microphys/KK_upscaled_covariances.F90src/Microphys/ice_dfsn_module.F90src/SILHS/est_kessler_microphys_module.F90src/Microphys/microphys_interface.incsrc/Microphys/cloud_sed_module.F90src/CLUBB_core/stats_clubb_utilities.F90src/SILHS/math_utilities.F90src/Microphys/estimate_scm_microphys_module.F90src/Microphys/CMakeLists.txtsrc/Microphys/Morrison_microphys/CMakeLists.txtsrc/SILHS/silhs_api_module.F90src/Microphys/mixed_moment_PDF_integrals.F90src/SILHS/latin_hypercube_driver_module.F90tests/run_silhs_test.pysrc/Microphys/morrison_microphys_module.F90src/Microphys/gfdl_activation.F90src/CLUBB_core/advance_xp2_xpyp_module.F90src/SILHS/lh_microphys_var_covar_module.F90src/clubb_driver.F90src/Microphys/silhs_category_variance_module.F90src/CLUBB_core/fill_holes.F90src/Microphys/microphys_driver.F90src/Radiation/radiation_module.F90src/Microphys/Microphys_utils/CMakeLists.txt900681c91bdbdf8d6cd069bab01663ebac1a32791788666832000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMicrophys loop push (#1355) * First set of loop pushes - feature addition to stats too to allow for calling stats_update multiple times in a timestep and averaging the results, which is quite nice for silhs and allows us to get rid of the special microphysics stats type * More loop pushes * Tiny changes to restore BFBness * Pushing loop into advance_microphys * Little more loop push * More basic loop pushing * More loop pushing, also found what seems to be a bug with additional columns, theres code that uses only the first one. Im leaving this in for now to maintain BFBness, but labeled the problem areas with TODOs * Potentially final batch of loop pushes * Adding acc fixes for microphys stuff - the 2D versions called are GPUized, so they need acc data statements surrounding them * Removing unneccesary single col versions of lots of things * Restoring some comments and formatting * A little more restoration, maybe unnecceary 2026-09-05 22:53:52 -0500900681c91bdbdf8d6cd069bab01663ebac1a3279Microphys loop push (#1355)editsrc/CLUBB_core/stats_netcdf.F90deletesrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90deletesrc/Microphys/Microphys_utils/CMakeLists.txteditsrc/Microphys/morrison_microphys_module.F90editsrc/clubb_driver.F90editsrc/Radiation/radiation_module.F90editsrc/Microphys/pdf_hydromet_microphys_wrapper.F90editsrc/SILHS/lh_microphys_var_covar_module.F90editsrc/Microphys/ice_dfsn_module.F90editsrc/SILHS/silhs_api_module.F90editsrc/Microphys/KK_microphys/CMakeLists.txteditsrc/Microphys/CMakeLists.txteditsrc/Microphys/silhs_category_variance_module.F90editsrc/SILHS/math_utilities.F90editsrc/SILHS/est_kessler_microphys_module.F90editsrc/Microphys/lh_microphys_driver_module.F90editsrc/SILHS/latin_hypercube_driver_module.F90editsrc/Microphys/gfdl_activation.F90editsrc/Microphys/mixed_moment_PDF_integrals.F90editsrc/Microphys/microphys_driver.F90editsrc/Microphys/KK_microphys/KK_upscaled_covariances.F90editsrc/Microphys/advance_microphys_module.F90editsrc/Microphys/estimate_scm_microphys_module.F90editsrc/Microphys/microphys_interface.inceditsrc/Microphys/cloud_sed_module.F90editsrc/CLUBB_core/stats_clubb_utilities.F90editsrc/Microphys/KK_microphys_module.F90edittests/run_silhs_test.pyeditsrc/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90editsrc/CLUBB_core/advance_xp2_xpyp_module.F90editsrc/SILHS/CMakeLists.txteditsrc/CLUBB_core/fill_holes.F90editsrc/Microphys/Morrison_microphys/CMakeLists.txtgithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse36http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/36/Started by an SCM change37900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/master900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/master900681c91bdbdf8d6cd069bab01663ebac1a3279900681c91bdbdf8d6cd069bab01663ebac1a3279refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#3722183242366725clubb_gpu_async_output_matching #3737false378063SUCCESS1788683289552http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/37/src/Microphys/KK_microphys/CMakeLists.txtsrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90src/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90src/Microphys/KK_microphys_module.F90src/SILHS/CMakeLists.txtsrc/CLUBB_core/stats_netcdf.F90src/Microphys/pdf_hydromet_microphys_wrapper.F90src/Microphys/advance_microphys_module.F90src/Microphys/lh_microphys_driver_module.F90src/Microphys/KK_microphys/KK_upscaled_covariances.F90src/Microphys/ice_dfsn_module.F90src/SILHS/est_kessler_microphys_module.F90src/Microphys/microphys_interface.incsrc/Microphys/cloud_sed_module.F90src/CLUBB_core/stats_clubb_utilities.F90src/SILHS/math_utilities.F90src/Microphys/estimate_scm_microphys_module.F90src/Microphys/CMakeLists.txtsrc/Microphys/Morrison_microphys/CMakeLists.txtsrc/SILHS/silhs_api_module.F90src/Microphys/mixed_moment_PDF_integrals.F90src/SILHS/latin_hypercube_driver_module.F90tests/run_silhs_test.pysrc/Microphys/morrison_microphys_module.F90src/Microphys/gfdl_activation.F90src/CLUBB_core/advance_xp2_xpyp_module.F90src/SILHS/lh_microphys_var_covar_module.F90src/clubb_driver.F90src/Microphys/silhs_category_variance_module.F90src/CLUBB_core/fill_holes.F90src/Microphys/microphys_driver.F90src/Radiation/radiation_module.F90src/Microphys/Microphys_utils/CMakeLists.txt900681c91bdbdf8d6cd069bab01663ebac1a32791788666832000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMicrophys loop push (#1355) * First set of loop pushes - feature addition to stats too to allow for calling stats_update multiple times in a timestep and averaging the results, which is quite nice for silhs and allows us to get rid of the special microphysics stats type * More loop pushes * Tiny changes to restore BFBness * Pushing loop into advance_microphys * Little more loop push * More basic loop pushing * More loop pushing, also found what seems to be a bug with additional columns, theres code that uses only the first one. Im leaving this in for now to maintain BFBness, but labeled the problem areas with TODOs * Potentially final batch of loop pushes * Adding acc fixes for microphys stuff - the 2D versions called are GPUized, so they need acc data statements surrounding them * Removing unneccesary single col versions of lots of things * Restoring some comments and formatting * A little more restoration, maybe unnecceary 2026-09-05 22:53:52 -0500900681c91bdbdf8d6cd069bab01663ebac1a3279Microphys loop push (#1355)editsrc/CLUBB_core/stats_netcdf.F90deletesrc/Microphys/Microphys_utils/microphys_stats_vars_module.F90deletesrc/Microphys/Microphys_utils/CMakeLists.txteditsrc/Microphys/morrison_microphys_module.F90editsrc/clubb_driver.F90editsrc/Radiation/radiation_module.F90editsrc/Microphys/pdf_hydromet_microphys_wrapper.F90editsrc/SILHS/lh_microphys_var_covar_module.F90editsrc/Microphys/ice_dfsn_module.F90editsrc/SILHS/silhs_api_module.F90editsrc/Microphys/KK_microphys/CMakeLists.txteditsrc/Microphys/CMakeLists.txteditsrc/Microphys/silhs_category_variance_module.F90editsrc/SILHS/math_utilities.F90editsrc/SILHS/est_kessler_microphys_module.F90editsrc/Microphys/lh_microphys_driver_module.F90editsrc/SILHS/latin_hypercube_driver_module.F90editsrc/Microphys/gfdl_activation.F90editsrc/Microphys/mixed_moment_PDF_integrals.F90editsrc/Microphys/microphys_driver.F90editsrc/Microphys/KK_microphys/KK_upscaled_covariances.F90editsrc/Microphys/advance_microphys_module.F90editsrc/Microphys/estimate_scm_microphys_module.F90editsrc/Microphys/microphys_interface.inceditsrc/Microphys/cloud_sed_module.F90editsrc/CLUBB_core/stats_clubb_utilities.F90editsrc/Microphys/KK_microphys_module.F90edittests/run_silhs_test.pyeditsrc/Microphys/KK_microphys/KK_upscaled_turbulent_sed.F90editsrc/CLUBB_core/advance_xp2_xpyp_module.F90editsrc/SILHS/CMakeLists.txteditsrc/CLUBB_core/fill_holes.F90editsrc/Microphys/Morrison_microphys/CMakeLists.txtgithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse36http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/36/Started by an SCM change14be5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterbe5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterbe5e217cd91196f514fb60f9668106e072c14c1bbe5e217cd91196f514fb60f9668106e072c14c1brefs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#1413884232366725clubb_gpu_async_output_matching #1414false145859FAILURE1783240090479http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/14/input_misc/tuner/error_rico.ininput_misc/tuner/error_gabls3_night.indash_app/plot_tab/case_definitions.pyclubb_python_api/clubb_python/CLUBB_core/lapack_interfaces.pyutilities/read_sam_moments/netcdf_var_collector.pyinput_misc/tuner/error_nov11_altocu.indash_app/assets/14_tab_compile_theme.cssinput_misc/tuner/error_dycoms2_rf01.ininput_misc/tuner/error_dycoms2_rf02_ds.inclubb_python_api/clubb_python/CLUBB_core/grid_class.pydash_app/compile_tab/callbacks.pyinput_misc/tuner/error_wangara.intuner/case_defaults.jsoninput_misc/tuner/error_dycoms2_rf02_do.inutilities/create_case_namelist.pyclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyinput_misc/tuner/error_dycoms2_rf02_nd.ininput_misc/tuner/error_arm.indash_app/compile_tab/runtime.pycmake/deps/GPTLDependency.cmakeclubb_python_api/tests/test_udt_return_contract.pydash_app/run_tab/layout.pyclubb_python_driver/io/sounding.pyclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyinput_misc/tuner/error_arm_97.inclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pydash_app/tune_tab/layout.pyinput_misc/tuner/error_fire.ininput_misc/tuner/error_gabls2.intuner/case_defaults.pyinput_misc/tuner/error_atex.intuner/job_runtime.pydash_app/compile_tab/discovery.pyclubb_python_api/clubb_python/prescribe_forcings.pydash_app/README.mdclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyinput_misc/tuner/error_four_cases.inpostprocessing/pyplotgen/config/Case_definitions.pydash_app/assets/11_tab_run_theme.cssclubb_python_api/CMakeLists.txtinput_misc/tuner/error_bomex.ininput_misc/tuner/error_bomex_fire.ininput/les_and_clubb_benchmark_runsdash_app/compile_tab/test_compile_tab_build_status.pyrun_scripts/run_scm.pyinput_misc/tuner/error_all.insrc/clubb_driver.F90input_misc/tuner/error_lba.inREADMEinput_misc/tuner/error_ticket_756.inbe5e217cd91196f514fb60f9668106e072c14c1b1783222022000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comTiny dash updates (#1327) * Cross-platform updates to help with running on Macs mainly. The biggest difference is that now our code expects the les data in input/, and I've added a symlink that points to the normal pub directory for it. This makes everything work the same, but also makes it so someone can download the les data and store it anywhere, then just change the symlink. * Little UI improvements * Small UI fix * Small fix needed for a different python version and a little UI update * Another tiny cross platform fix * Updating build removal method and adding a mac specific bit for GPTL compiling that fixes environment issues * Removing accidentally added file 2026-07-04 22:27:02 -0500be5e217cd91196f514fb60f9668106e072c14c1bTiny dash updates (#1327)editclubb_python_api/clubb_python/CLUBB_core/stats_netcdf.pyeditinput_misc/tuner/error_bomex.ineditdash_app/compile_tab/runtime.pyeditinput_misc/tuner/error_dycoms2_rf02_nd.ineditutilities/read_sam_moments/netcdf_var_collector.pyeditsrc/clubb_driver.F90editinput_misc/tuner/error_fire.ineditrun_scripts/run_scm.pyeditdash_app/README.mdeditinput_misc/tuner/error_dycoms2_rf01.ineditinput_misc/tuner/error_nov11_altocu.ineditclubb_python_api/clubb_python/CLUBB_core/lapack_interfaces.pyeditinput_misc/tuner/error_dycoms2_rf02_ds.ineditinput_misc/tuner/error_dycoms2_rf02_do.ineditclubb_python_api/CMakeLists.txteditdash_app/compile_tab/discovery.pyeditdash_app/tune_tab/layout.pyeditinput_misc/tuner/error_gabls2.ineditcmake/deps/GPTLDependency.cmakeeditclubb_python_api/clubb_python/CLUBB_core/remapping_module.pyeditdash_app/assets/11_tab_run_theme.csseditinput_misc/tuner/error_wangara.ineditclubb_python_api/clubb_python/CLUBB_core/err_info_type_module.pyeditclubb_python_api/tests/test_udt_return_contract.pyeditREADMEeditutilities/create_case_namelist.pyeditdash_app/run_tab/layout.pyeditinput_misc/tuner/error_atex.ineditinput_misc/tuner/error_gabls3_night.ineditinput_misc/tuner/error_bomex_fire.inaddinput/les_and_clubb_benchmark_runseditinput_misc/tuner/error_lba.ineditinput_misc/tuner/error_rico.ineditclubb_python_api/clubb_python/CLUBB_core/parameters_tunable.pyeditdash_app/assets/14_tab_compile_theme.cssedittuner/case_defaults.jsoneditinput_misc/tuner/error_arm_97.inadddash_app/compile_tab/test_compile_tab_build_status.pyedittuner/job_runtime.pyedittuner/case_defaults.pyeditinput_misc/tuner/error_ticket_756.ineditinput_misc/tuner/error_all.ineditclubb_python_driver/io/sounding.pyeditclubb_python_api/clubb_python/CLUBB_core/grid_class.pyeditclubb_python_api/clubb_python/prescribe_forcings.pyeditdash_app/plot_tab/case_definitions.pyeditinput_misc/tuner/error_arm.ineditinput_misc/tuner/error_four_cases.ineditdash_app/compile_tab/callbacks.pyeditpostprocessing/pyplotgen/config/Case_definitions.pygithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse15http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/15/13http://carson.math.uwm.edu/jenkins/job/clubb_gpu_async_output_matching/13/38truefalsefalsefalse