Started by user Gunther Huebler
Checking out git https://github.com/larson-group/clubb.git into /home/jenkins/workspace/clubb_BFB_generalized_vertical_grid_test_branch@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 to read jenkins_tests/clubb_generalized_vertical_grid_test/Jenkinsfile
The recommended git tool is: git
Wiping out workspace first.
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
 > git init /home/jenkins/workspace/clubb_BFB_generalized_vertical_grid_test_branch@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
 > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 > git rev-parse refs/remotes/origin/grid_reverse_matrix_test^{commit} # timeout=10
Checking out Revision 04b2b95aa7271cb158ca6fe8efed3be5d7c4f4cb (refs/remotes/origin/grid_reverse_matrix_test)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 04b2b95aa7271cb158ca6fe8efed3be5d7c4f4cb # timeout=10
Commit message: "Making new flag l_force_descending_solves that forces us to use descending solves. Having it true keeps results BFB between ascending and descending when using -O0."
First time build. Skipping changelog.
[Pipeline] Start of Pipeline
[Pipeline] node
Running on nelson in /home/jenkins/workspace/clubb_BFB_generalized_vertical_grid_test_branch
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Wiping out workspace first.
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
 > git init /home/jenkins/workspace/clubb_BFB_generalized_vertical_grid_test_branch # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
 > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
Checking out Revision 04b2b95aa7271cb158ca6fe8efed3be5d7c4f4cb (refs/remotes/origin/grid_reverse_matrix_test)
Commit message: "Making new flag l_force_descending_solves that forces us to use descending solves. Having it true keeps results BFB between ascending and descending when using -O0."
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Enable Model Flag for Test)
[Pipeline] sh
 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/grid_reverse_matrix_test^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 04b2b95aa7271cb158ca6fe8efed3be5d7c4f4cb # timeout=10
+ sed -i 's:l_test_grid_generalization.*:l_test_grid_generalization = .true.:g' src/CLUBB_core/model_flags.F90
[Pipeline] sh
+ sed -i 's:l_force_descending_solves.*:l_force_descending_solves = .false.:g' src/CLUBB_core/model_flags.F90
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Turn Off Sponge Damping in Case Setups)
[Pipeline] sh
+ sed -i 's:thlm_sponge_damp_settings%l_sponge_damping.*:thlm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s6_model.in
[Pipeline] sh
+ sed -i 's:rtm_sponge_damp_settings%l_sponge_damping.*:rtm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s6_model.in
[Pipeline] sh
+ sed -i 's:thlm_sponge_damp_settings%l_sponge_damping.*:thlm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s11_model.in
[Pipeline] sh
+ sed -i 's:rtm_sponge_damp_settings%l_sponge_damping.*:rtm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s11_model.in
[Pipeline] sh
+ sed -i 's:thlm_sponge_damp_settings%l_sponge_damping.*:thlm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s12_model.in
[Pipeline] sh
+ sed -i 's:rtm_sponge_damp_settings%l_sponge_damping.*:rtm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s12_model.in
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Compile)
[Pipeline] sh
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load intel netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ compile/compile.py -debug
/home/jenkins/workspace/clubb_BFB_generalized_vertical_grid_test_branch@tmp/durable-2d88dc8d/script.sh.copy: line 3: compile/compile.py: No such file or directory
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Lapack)
Stage "Lapack" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Custom LU)
Stage "Custom LU" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 127
Finished: FAILURE