+ python postprocessing/pyplotgen/pyplotgen.py -nproc 4 -l -c output/solver_compare/lapack_output output/solver_compare/custom_lu_output output/solver_compare/bicgstab_output -o output/88f0300_solver
Installing uv 0.11.32 in /home/jenkins/workspace/clubb_branch_plots@3/.clubb-python-tools/bin
downloading uv 0.11.32 x86_64-unknown-linux-gnu
installing to /home/jenkins/workspace/clubb_branch_plots@3/.clubb-python-tools/bin
uv
uvx
everything's installed!
Creating CLUBB virtualenv: /home/jenkins/workspace/clubb_branch_plots@3/.venv-python
Downloading cpython-3.12.13-linux-x86_64-gnu (download) (32.6MiB)
Downloaded cpython-3.12.13-linux-x86_64-gnu (download)
Using CPython 3.12.13
Creating virtual environment at: .venv-python
Activate with: source .venv-python/bin/activate
Installing plot requirements into /home/jenkins/workspace/clubb_branch_plots@3/.venv-python
Using Python 3.12.13 environment at: .venv-python
Resolved 25 packages in 3.37s
Building fpdf==1.7.2
Downloading opencv-python-headless (59.1MiB)
Downloading pygments (1.2MiB)
Downloading kiwisolver (1.4MiB)
Downloading fonttools (5.1MiB)
Downloading netcdf4 (9.7MiB)
Downloading cftime (1.6MiB)
Downloading numpy (15.9MiB)
Downloading meson (1.1MiB)
Downloading pillow (6.6MiB)
Downloading pandas (10.3MiB)
Downloading matplotlib (8.4MiB)
Built fpdf==1.7.2
Downloaded cftime
Downloaded kiwisolver
Downloaded pygments
Downloaded meson
Downloaded pillow
Downloaded fonttools
Downloaded netcdf4
Downloaded matplotlib
Downloaded opencv-python-headless
Downloaded numpy
Downloaded pandas
Prepared 25 packages in 6.36s
Installed 25 packages in 48ms
+ certifi==2026.7.22
+ cftime==1.6.6
+ contourpy==1.4.0
+ cycler==0.12.1
+ fonttools==4.66.1
+ fpdf==1.7.2
+ iniconfig==2.3.0
+ kiwisolver==1.5.1
+ matplotlib==3.10.9
+ meson==1.12.1
+ netcdf4==1.7.4
+ ninja==1.13.2
+ numpy==2.5.3
+ opencv-python-headless==4.14.0.94
+ packaging==26.3
+ pandas==3.0.6
+ pillow==12.3.0
+ pluggy==1.6.0
+ pygments==2.21.0
+ pyparsing==3.3.3
+ pytest==9.1.1
+ python-dateutil==2.9.0.post0
+ seaborn==0.13.2
+ six==1.17.0
+ tabulate==0.10.0
Ready: /home/jenkins/workspace/clubb_branch_plots@3/.venv-python/bin/python
/home/jenkins/workspace/clubb_branch_plots@3/postprocessing/pyplotgen/config/VariableGroupBase.py:480: SyntaxWarning: invalid escape sequence '\m'
'axis_title': 'bv_freq_sqd [$\mathrm{1/s^2}$]',
/home/jenkins/workspace/clubb_branch_plots@3/postprocessing/pyplotgen/config/VariableGroupBase.py:496: SyntaxWarning: invalid escape sequence '\m'
'axis_title': 'bv_freq_sqd_splat [$\mathrm{1/s^2}$]',
/home/jenkins/workspace/clubb_branch_plots@3/postprocessing/pyplotgen/src/interoperability.py:41: SyntaxWarning: invalid escape sequence '\$'
return re.sub("\$[^$]*\$",'',string)
/home/jenkins/workspace/clubb_branch_plots@3/postprocessing/pyplotgen/src/DataReader.py:590: SyntaxWarning: invalid escape sequence '\m'
units = "$\mathrm{" + raw_units + "}$" # $'s are used to format equations
*******************************************
Welcome to PyPlotGen.
*******************************************
Checking for model benchmark output...
Benchmark output found in /home/jenkins/workspace/clubb_branch_plots@3/input/les_and_clubb_benchmark_runs/.
-------------------------------------------
Running...
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NOTE: If processing multiple cases (ARM, BOMEX, etc.) with multithreading,
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-------------------------------------------
ARM: SUCCESS --> Images found.
ARM_97: SUCCESS --> Images found.
ATEX: SUCCESS --> Images found.
BOMEX: SUCCESS --> Images found.
CGILS_S11: SUCCESS --> Images found.
CGILS_S12: SUCCESS --> Images found.
CGILS_S6: SUCCESS --> Images found.
DYCOMS2_RF01: SUCCESS --> Images found.
DYCOMS2_RF01_FIXED_SST: SUCCESS --> Images found.
DYCOMS2_RF02_DS: SUCCESS --> Images found.
DYCOMS2_RF02_ND: SUCCESS --> Images found.
GABLS3_NIGHT: SUCCESS --> Images found.
LBA: SUCCESS --> Images found.
MPACE_B: SUCCESS --> Images found.
RICO: SUCCESS --> Images found.
TWP_ICE: SUCCESS --> Images found.
WANGARA: SUCCESS --> Images found.
-------------------------------------------
Output can be viewed at file:///home/jenkins/workspace/clubb_branch_plots@3/output/88f0300_solver/index.html with a web browser
Pyplotgen ran in 177 seconds.
See error.log in the output folder for detailed info including warnings.
error.log messages include:
26-10-02 17:06:25.505 proc_id: 3843385 Warning, unknown model detected. PyPlotgen doesn't know where this netcdf dependent_data is from. <class 'netCDF4.Dataset'>
