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+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv,
netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ ulimit -s 8388608
+ ./tests/run_jax_vs_fortran_cases.py -j 8
CLUBB JAX runtime:
  Environment: /home/jenkins/workspace/clubb_branch_jax/.venv-jax (Python 3.12)
  Accelerator: cpu
  JAX: 0.11.0 (jaxlib 0.11.0)
  Device: cpu:0

Run settings:
  Output: /home/jenkins/workspace/clubb_branch_jax/output/tests/jax_driver_test_results
  Statistics: input/stats/standard_stats.in
  Debug: case default
  Columns: 4
  Workers: 8
  Comparison limits: absolute 1e-07; percentage 1e-07%

Cases and flag sets:
  23 cases x 1 flag set = 23 JAX/Fortran pairs
  Flag sets:
    default
  Cases:
    arm (360 iterations)
    atex (360 iterations)
    bomex (native duration)
    cobra (360 iterations)
    dycoms2_rf01 (native duration)
    dycoms2_rf01_fixed_sst (300 iterations)
    dycoms2_rf02_nd (native duration)
    fire (native duration)
    gabls2 (360 iterations)
    gabls3_night (360 iterations)
    jun25_altocu (180 iterations)
    neutral (native duration)
    wangara (native duration)
    dycoms2_rf02_do (native duration)
    dycoms2_rf02_ds (240 iterations)
    lba_kk (360 iterations)
      - input case: lba
      - microphysics_setting.microphys_scheme = "khairoutdinov_kogan"
      - microphysics_setting.lh_microphys_type = "disabled"
      - microphysics_setting.l_ice_microphys = .false.
      - microphysics_setting.l_graupel = .false.
    rico (380 iterations)
      - dt_main: 60 s
    lba (93 iterations)
      - percentage limit: 0.001%
      - microphysics_setting.lh_microphys_type = "disabled"
    clex9_oct14 (73 iterations)
      - percentage limit: 0.001%
    nov11_altocu (62 iterations)
      - percentage limit: 0.001%
    rico_silhs (360 iterations)
      - dt_main: 60 s
      - configurable_silhs_flags_nl.l_lh_deterministic_test = .true.
      - configurable_silhs_flags_nl.l_lh_importance_sampling = .false.
      - configurable_silhs_flags_nl.l_random_k_lh_start = .false.
    lba_kk_silhs (275 iterations)
      - input case: lba
      - dt_main: 60 s
      - microphysics_setting.microphys_scheme = "khairoutdinov_kogan"
      - microphysics_setting.lh_microphys_type = "interactive"
      - microphysics_setting.l_local_kk = .true.
      - microphysics_setting.l_ice_microphys = .false.
      - microphysics_setting.l_graupel = .false.
      - configurable_silhs_flags_nl.l_lh_deterministic_test = .true.
      - configurable_silhs_flags_nl.l_lh_importance_sampling = .false.
      - configurable_silhs_flags_nl.l_random_k_lh_start = .false.
    lba_silhs (240 iterations)
      - percentage limit: 0.001%
      - input case: lba
      - dt_main: 60 s
      - configurable_silhs_flags_nl.l_lh_deterministic_test = .true.
      - configurable_silhs_flags_nl.l_lh_importance_sampling = .false.
      - configurable_silhs_flags_nl.l_random_k_lh_start = .false.

[Status        ] Flag set                 Case                       Timesteps    JAX (s)  Fortran (s)  Total (s)
-----------------------------------------------------------------------------------------------------------------
[match         ] default                  fire                       180 / 180      181.6          3.6      190.1
[match         ] default                  dycoms2_rf01_fixed_sst     300 / 300      238.7          4.0      248.9
[match         ] default                  dycoms2_rf01               240 / 240      256.2         20.3      293.7
[match         ] default                  dycoms2_rf02_nd            360 / 360      280.7          5.4      294.8
[match         ] default                  bomex                      360 / 360      284.8          7.6      302.2
[match         ] default                  arm                        360 / 360      284.7         10.5      306.5
[match         ] default                  cobra                      360 / 360      298.2          9.9      321.4
[match         ] default                  atex                       360 / 360      301.9         15.5      331.7
[match         ] default                  gabls3_night               360 / 360       91.5          7.1      102.0
[match         ] default                  gabls2                     360 / 360      136.7         22.0      166.2
[match         ] default                  jun25_altocu               180 / 180      183.6          8.6      200.4
[match         ] default                  neutral                    360 / 360      284.9          8.0      301.4
[match         ] default                  lba                          93 / 93      282.0          6.7      296.8
[match         ] default                  wangara                    480 / 480      343.8          7.6      362.8
[match         ] default                  rico                       380 / 380      336.0          9.6      349.7
[match         ] default                  clex9_oct14                  73 / 73      198.6          4.9      209.7
[match         ] default                  dycoms2_rf02_ds            240 / 240      440.6         24.1      472.8
[match         ] default                  nov11_altocu                 62 / 62      194.8          4.1      203.9
[match         ] default                  rico_silhs                 360 / 360      149.7          6.6      160.0
[match         ] default                  lba_kk                     360 / 360      580.2         17.5      606.6
[match         ] default                  dycoms2_rf02_do            360 / 360      621.8         29.3      660.5
[diff          ] default                  lba_kk_silhs               274 / 275      272.0         27.8      305.7
[diff          ] default                  lba_silhs                   78 / 240      775.0         56.7      840.7

Flag set default:
  Match Diff Failed
  ----- ---- ------
     21    2      0

Total time: 27m 5.1s
Results JSON: /home/jenkins/workspace/clubb_branch_jax/output/tests/jax_driver_test_results/case_compare_summary.json
Bindiff log: /home/jenkins/workspace/clubb_branch_jax/output/tests/jax_driver_test_results/final_bindiff.log [failed (exit 1)]