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#230</fullDisplayName><id>230</id><keepLog>false</keepLog><number>230</number><queueId>15716</queueId><result>SUCCESS</result><timestamp>1654157467490</timestamp><url>http://carson.math.uwm.edu/jenkins/job/clubb_G_unit_gfortran_tests/230/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/clubb_bin_diff_regression_gfortran_test_old/Jenkinsfile</affectedPath><commitId>d3e945d16e887b46b07827c135f73d33831fa900</commitId><timestamp>1654109323000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/pbroels</absoluteUrl><fullName>pbroels</fullName></author><authorEmail>pbroels@uwm.edu</authorEmail><comment>Changed clubb_bin_diff_regression_gfortran_test_new to clubb_bin_diff_regression_gfortran_test and clubb_bin_diff_regression_gfortran_test to clubb_bin_diff_regression_gfortran_test_old to reflect current usage.
</comment><date>2022-06-01 13:48:43 -0500</date><id>d3e945d16e887b46b07827c135f73d33831fa900</id><msg>Changed clubb_bin_diff_regression_gfortran_test_new to clubb_bin_diff_regression_gfortran_test and clubb_bin_diff_regression_gfortran_test to clubb_bin_diff_regression_gfortran_test_old to reflect current usage.</msg><path><editType>edit</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test_old/Jenkinsfile</file></path><path><editType>delete</editType><file>jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>README</affectedPath><commitId>291e87da51321a48b5c9d5c46e6b4459b51ab2a4</commitId><timestamp>1654109959000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>This commit is not bit changing
</comment><date>2022-06-01 13:59:19 -0500</date><id>291e87da51321a48b5c9d5c46e6b4459b51ab2a4</id><msg>This commit is not bit changing</msg><path><editType>edit</editType><file>README</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>README</affectedPath><commitId>0ff480f574ef756272df942a2cd6e217fba760e2</commitId><timestamp>1654110299000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>This commt is not bit changing

But commit e4f125ba067ba8083f917e0e06b6b2398483d3e4 was BIT_CHANGING for simulations that use silhs
</comment><date>2022-06-01 14:04:59 -0500</date><id>0ff480f574ef756272df942a2cd6e217fba760e2</id><msg>This commt is not bit changing</msg><path><editType>edit</editType><file>README</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/new_hybrid_pdf_main.F90</affectedPath><affectedPath>src/G_unit_test_types/pdf_parameter_tests.F90</affectedPath><affectedPath>src/G_unit_test_types/spurious_source_test.F90</affectedPath><affectedPath>src/CLUBB_core/new_pdf_main.F90</affectedPath><commitId>aa26820b4f080d4a8721dd0f578737344061f9a3</commitId><timestamp>1654112656000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>The G_unit tests never allocated pdf_implicit_coefs_terms. It's unclear to me how these were working before, but it seems that something about making these 2D allocatable arrays exposed the bug.
</comment><date>2022-06-01 14:44:16 -0500</date><id>aa26820b4f080d4a8721dd0f578737344061f9a3</id><msg>The G_unit tests never allocated pdf_implicit_coefs_terms. It's unclear to me how these were working before, but it seems that something about making these 2D allocatable arrays exposed the bug.</msg><path><editType>edit</editType><file>src/G_unit_test_types/spurious_source_test.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/new_pdf_main.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/new_hybrid_pdf_main.F90</file></path><path><editType>edit</editType><file>src/G_unit_test_types/pdf_parameter_tests.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><commitId>b736467752bbdc37c77ea2504d0b4ffcc7383ac8</commitId><timestamp>1654117361000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Making zt2zm calls with pdf_implicit_coefs_terms use the 2D version.
</comment><date>2022-06-01 16:02:41 -0500</date><id>b736467752bbdc37c77ea2504d0b4ffcc7383ac8</id><msg>Making zt2zm calls with pdf_implicit_coefs_terms use the 2D version.</msg><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><commitId>8b9b43ecb1c82b2a06882613bbe7e2e61b86e0af</commitId><timestamp>1654122180000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Removing setup_grid and setup_parameters functionality from setup_clubb_core. This is beacuse in host models the required grid information may not be known during the setup process, resulting in dummy arguments for setup_clubb_core and the grid and paramters being setup during runtime anyway. Now, in the host models we can call these subroutines immediately after setup_clubb_core to maintain identical functionality (sam, wrf), and in others we can wait to call these until the main timestepping procedure (cam,e3sm).
</comment><date>2022-06-01 17:23:00 -0500</date><id>8b9b43ecb1c82b2a06882613bbe7e2e61b86e0af</id><msg>Removing setup_grid and setup_parameters functionality from setup_clubb_core. This is beacuse in host models the required grid information may not be known during the setup process, resulting in dummy arguments for setup_clubb_core and the grid and paramters being setup during runtime anyway. Now, in the host models we can call these subroutines immediately after setup_clubb_core to maintain identical functionality (sam, wrf), and in others we can wait to call these until the main timestepping procedure (cam,e3sm).</msg><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/parameters_tunable.F90</affectedPath><affectedPath>src/G_unit_test_types/spurious_source_test.F90</affectedPath><affectedPath>src/CLUBB_core/grid_class.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><commitId>ed85915bbcd00d1dba9b17752de763547bfa429b</commitId><timestamp>1654129942000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Making 2D versions of setup_grid and setup_parameters.
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_class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/new_hybrid_pdf_main.F90</affectedPath><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp3_module.F90</affectedPath><affectedPath>src/CLUBB_core/pdf_closure_module.F90</affectedPath><affectedPath>src/CLUBB_core/grid_class.F90</affectedPath><affectedPath>src/CLUBB_core/adg1_adg2_3d_luhar_pdf.F90</affectedPath><affectedPath>src/CLUBB_core/sponge_layer_damping.F90</affectedPath><affectedPath>src/CLUBB_core/stats_type_utilities.F90</affectedPath><affectedPath>src/CLUBB_core/mixing_length.F90</affectedPath><affectedPath>src/microphys_driver.F90</affectedPath><affectedPath>src/CLUBB_core/advance_windm_edsclrm_module.F90</affectedPath><affectedPath>src/advance_microphys_module.F90</affectedPath><affectedPath>src/CLUBB_core/stats_clubb_utilities.F90</affectedPath><affectedPath>src/CLUBB_core/mono_flux_limiter.F90</affectedPath><affectedPath>src/G_unit_test_types/pdf_parameter_tests.F90</affectedPath><affectedPath>src/CLUBB_core/advance_helper_module.F90</affectedPath><affectedPath>src/CLUBB_core/new_tsdadg_pdf.F90</affectedPath><affectedPath>src/CLUBB_core/LY93_pdf.F90</affectedPath><affectedPath>src/CLUBB_core/clip_explicit.F90</affectedPath><affectedPath>src/CLUBB_core/numerical_check.F90</affectedPath><affectedPath>src/CLUBB_core/new_pdf.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xm_wpxp_module.F90</affectedPath><affectedPath>src/CLUBB_core/turbulent_adv_pdf.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/setup_clubb_pdf_params.F90</affectedPath><affectedPath>src/CLUBB_core/fill_holes.F90</affectedPath><affectedPath>src/CLUBB_core/new_pdf_main.F90</affectedPath><affectedPath>src/CLUBB_core/pos_definite_module.F90</affectedPath><commitId>e8deb21c70b21643aee441c04fa17278ac8d7c91</commitId><timestamp>1654031468000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Almost final loop pushes (#1012)

* Pushing loop into clip_rcm

* Pushing column loop into trapezoid routines.

* Pushing column loop into clip_covar routines.

* Pushing column loop into clip_variance and clip_skewness.

* Replacing sgn_turbulent_velocity with built in fortran sign

* Removing gr from argument list of stats calls, replacing with just nz

* Replacing some usages of gr with just the number of vertical levels

* Replacing some usages of gr with just the number of vertical levels again

* Missed a couple files to commit

* Pushing some loops and removing need for gr to be passed into some routines.

* Pushing loop into advance_xp3

* Pushing loop into mixing length

* Some more loop pushing

* Pushing some loops into mono_flux limit, skipping the lhs routine since it's a bit tricky at the moment, will do after change to grid class.

* Removing gr from argument list of stats accumulate

* Precalculating zt2zm so that we can use 2d version

* Precalculating um/vm ddzt so that we can use 2d version

* Precalculating things to use 2d version of zt2zm

* Making 2d version of cubic interp for grid class

* Small modifications to sponge damping code argument lists

* Renaming some variables
</comment><date>2022-05-31 16:11:08 -0500</date><id>e8deb21c70b21643aee441c04fa17278ac8d7c91</id><msg>Almost final loop pushes (#1012)</msg><path><editType>edit</editType><file>src/CLUBB_core/new_pdf.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/new_pdf_main.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/pdf_closure_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_helper_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/LY93_pdf.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/numerical_check.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/pos_definite_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/adg1_adg2_3d_luhar_pdf.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_type_utilities.F90</file></path><path><editType>edit</editType><file>src/microphys_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>src/advance_microphys_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/grid_class.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clip_explicit.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_xp3_module.F90</file></path><path><editType>edit</editType><file>src/clubb_driver.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/fill_holes.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/mixing_length.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/new_tsdadg_pdf.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/clubb_api_module.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/new_hybrid_pdf_main.F90</file></path><path><editType>edit</editType><file>src/G_unit_test_types/pdf_parameter_tests.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/turbulent_adv_pdf.F90</file></path><path><editType>edit</editType><file>src/CLUBB_core/sponge_layer_damping.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>microphysics.F90</affectedPath><commitId>7a9a332ece44f0a0ee2210d5fa63d63fb93a19b8</commitId><timestamp>1654040073000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Making compatible with latest clubb change.
</comment><date>2022-05-31 18:34:33 -0500</date><id>7a9a332ece44f0a0ee2210d5fa63d63fb93a19b8</id><msg>Making compatible with latest clubb change.</msg><path><editType>edit</editType><file>microphysics.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/CLUBB_core/new_hybrid_pdf_main.F90</affectedPath><affectedPath>src/CLUBB_core/advance_clubb_core_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xm_wpxp_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_wp2_wp3_module.F90</affectedPath><affectedPath>src/G_unit_test_types/spurious_source_test.F90</affectedPath><affectedPath>src/clubb_driver.F90</affectedPath><affectedPath>src/CLUBB_core/clubb_api_module.F90</affectedPath><affectedPath>src/CLUBB_core/pdf_closure_module.F90</affectedPath><affectedPath>src/G_unit_test_types/pdf_parameter_tests.F90</affectedPath><affectedPath>src/CLUBB_core/new_pdf_main.F90</affectedPath><affectedPath>src/CLUBB_core/pdf_parameter_module.F90</affectedPath><affectedPath>src/CLUBB_core/advance_xp2_xpyp_module.F90</affectedPath><commitId>1e537bac5d385007334ca3a6f2b16a17ae0016e2</commitId><timestamp>1654040788000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Making pdf_implicit_coefs_terms a type containing 2D arrays. (#1014)

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