Started by an SCM change
Obtained jenkins_tests/clubb_BFB_varying_flags_gfortran_test/Jenkinsfile from git <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a>
<span class="pipeline-new-node" nodeId="2" startId="2">[Pipeline] Start of Pipeline
</span><span class="pipeline-new-node" nodeId="3" startId="3" enclosingId="2">[Pipeline] node
</span><span class="pipeline-node-3">Still waiting to schedule task
‘<a href='/jenkins/computer/condella/' class='jenkins-table__link model-link model-link--float'>condella</a>’ is offline
‘<a href='/jenkins/computer/malan/' class='jenkins-table__link model-link model-link--float'>malan</a>’ is offline
‘<a href='/jenkins/computer/overlie/' class='jenkins-table__link model-link model-link--float'>overlie</a>’ is offline
Running on <a href='/jenkins/computer/nelson/' class='jenkins-table__link model-link model-link--float'>nelson</a> in /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test
</span><span class="pipeline-new-node" nodeId="4" startId="4" enclosingId="3">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="5" startId="5" enclosingId="4">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="6" startId="6" enclosingId="5" label="Declarative: Checkout SCM">[Pipeline] { (Declarative: Checkout SCM)
</span><span class="pipeline-new-node" nodeId="7" enclosingId="6">[Pipeline] checkout
</span><span class="pipeline-node-7">The recommended git tool is: git
Wiping out workspace first.
Cloning the remote Git repository
Cloning repository <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a>
 &gt; git init /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test # timeout=10
Fetching upstream changes from <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.34.1'
 &gt; git fetch --tags --force --progress -- <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
Checking out Revision d4fbf466f74b11ca7b5a81575427768beebc3f5b (refs/remotes/origin/master)
Commit message: "Fixing bug that caused incorrect times to be written to netcdf in cases where stats_tout (output interval) &gt; dt_main (timestep). This is BIT_CHANGING because of that, but only for the time variable (no field differences), and only for cases where we don't output each timestep."
 &gt; git config remote.origin.url <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a> # timeout=10
 &gt; git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 &gt; git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f d4fbf466f74b11ca7b5a81575427768beebc3f5b # timeout=10
 &gt; git rev-list --no-walk a38df744233769a1888462f2616bd9d8c007fcf5 # timeout=10
</span><span class="pipeline-new-node" nodeId="8" startId="6">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="9" startId="5">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="10" startId="10" enclosingId="4">[Pipeline] withEnv
</span><span class="pipeline-new-node" nodeId="11" startId="11" enclosingId="10">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="12" startId="12" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="13" startId="13" enclosingId="12" label="Update sys_admin Repo">[Pipeline] { (Update sys_admin Repo)
</span><span class="pipeline-new-node" nodeId="14" enclosingId="13">[Pipeline] sh
</span><span class="pipeline-node-14">+ git -C /home/pub/jenkins_BFB_test_configs/sys_admin pull
Already up to date.
</span><span class="pipeline-new-node" nodeId="15" startId="13">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="16" startId="12">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="17" startId="17" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="18" startId="18" enclosingId="17" label="Run Python Test">[Pipeline] { (Run Python Test)
</span><span class="pipeline-new-node" nodeId="19" enclosingId="18">[Pipeline] sh
</span><span class="pipeline-node-19">+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7,
netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_varying_flags_gfortran_test_config
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/default
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/default
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag1
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag1
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag10
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag10
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag11
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag11
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag12
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag12
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag13
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag13
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag14
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag14
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag15
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag15
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag16
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag16
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag17
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag17
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag18
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag18
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag2
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag2
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag3
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag3
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag4
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag4
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag5
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag5
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag6
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag6
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag7
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag7
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag8
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag8
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']
Directory 1 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/d4fbf466f74b11ca7b5a81575427768beebc3f5b/flag9
Directory 2 is /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test/a38df744233769a1888462f2616bd9d8c007fcf5/flag9
Using reporting threshold:  0.0 


The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']


================================================ arm_97 ================================================
&gt;No differences detected by the linux diff in arm_97_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm_97.&lt;&lt;&lt;

=====================================================================================================

================================================ arm ================================================
&gt;No differences detected by the linux diff in arm_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case arm.&lt;&lt;&lt;

=====================================================================================================

================================================ atex ================================================
&gt;No differences detected by the linux diff in atex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case atex.&lt;&lt;&lt;

=====================================================================================================

================================================ bomex ================================================
&gt;No differences detected by the linux diff in bomex_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case bomex.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf01 ================================================
&gt;No differences detected by the linux diff in dycoms2_rf01_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.&lt;&lt;&lt;

=====================================================================================================

================================================ dycoms2_rf02_ds ================================================
&gt;No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.&lt;&lt;&lt;

=====================================================================================================

================================================ gabls3_night ================================================
&gt;The linux diff detected differences in gabls3_night_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file gabls3_night_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case gabls3_night&lt;&lt;&lt;

=====================================================================================================

================================================ lba ================================================
&gt;No differences detected by the linux diff in lba_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case lba.&lt;&lt;&lt;

=====================================================================================================

================================================ rico ================================================
&gt;No differences detected by the linux diff in rico_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case rico.&lt;&lt;&lt;

=====================================================================================================

================================================ twp_ice ================================================
&gt;The linux diff detected differences in twp_ice_stats.nc&lt;
&gt;&gt;Differences above threshold were detected in the common fields in file twp_ice_stats.nc&lt;&lt;
&gt;&gt;&gt;Differences in common variables detected for case twp_ice&lt;&lt;&lt;

=====================================================================================================

================================================ wangara ================================================
&gt;No differences detected by the linux diff in wangara_stats.nc&lt;
&gt;&gt;&gt;The linux diff could not detect any differences in the file pairs for case wangara.&lt;&lt;&lt;

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 9 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'lba', 'rico', 'wangara']
Fail: 2 cases ['gabls3_night', 'twp_ice']

Comparing flag set: default

Comparing flag set: flag1

Comparing flag set: flag10

Comparing flag set: flag11

Comparing flag set: flag12

Comparing flag set: flag13

Comparing flag set: flag14

Comparing flag set: flag15

Comparing flag set: flag16

Comparing flag set: flag17

Comparing flag set: flag18

Comparing flag set: flag2

Comparing flag set: flag3

Comparing flag set: flag4

Comparing flag set: flag5

Comparing flag set: flag6

Comparing flag set: flag7

Comparing flag set: flag8

Comparing flag set: flag9

DIFFERENCE SUMMARY:
  default:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag1:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag10:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag11:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag12:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag13:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag14:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag15:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag16:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag17:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag18:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag2:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag3:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag4:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag5:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag6:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag7:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag8:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ
  flag9:
    gabls3_night: NetCDF values differ
    twp_ice: NetCDF values differ

SUMMARY: differences were detected across varying-flags output.

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test
Checking specified repo: /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test

Using /home/jenkins/workspace/clubb_BFB_varying_flags_gfortran_test with origin <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a>

Output Save Mode: none

Using branch: master

Making list from 'UnresolvedCommits':

CheckRange = True: Getting commit range

Run Output Path: output

Run commands: ['python compile.py -debug', '\nrm -rf output', '\nmkdir output', '\npython run_scripts/run_clubb_w_varying_flags.py --min-cases -max_iters=360 -f run_scripts/run_bindiff_w_flags_config_core_flags.json']

Diffing command: run_scripts/run_bindiff_varying_flags_output.py

=============================== Running Test ===============================

Parsing message from commit: d4fbf466f74b11ca7b5a81575427768beebc3f5b
	Found: BIT_CHANGING

Checking Commit: d4fbf466f74b11ca7b5a81575427768beebc3f5b
	Checking out d4fbf466f74b11ca7b5a81575427768beebc3f5b
	Running: 'python compile.py -debug'
	Running: 'rm -rf output'
	Running: 'mkdir output'
	Running: 'python run_scripts/run_clubb_w_varying_flags.py --min-cases -max_iters=360 -f run_scripts/run_bindiff_w_flags_config_core_flags.json'
	Checking out a38df744233769a1888462f2616bd9d8c007fcf5
	Running: 'python compile.py -debug'
	Running: 'rm -rf output'
	Running: 'mkdir output'
	Running: 'python run_scripts/run_clubb_w_varying_flags.py --min-cases -max_iters=360 -f run_scripts/run_bindiff_w_flags_config_core_flags.json'
	Diffing: 'run_scripts/run_bindiff_varying_flags_output.py d4fbf466f74b11ca7b5a81575427768beebc3f5b a38df744233769a1888462f2616bd9d8c007fcf5'
	Commit 'd4fbf466f74b11ca7b5a81575427768beebc3f5b' is BIT_CHANGING and properly labelled as such.

=============================== Test Results ===============================

Commit Range Checked = a38df744233769a1888462f2616bd9d8c007fcf5...d4fbf466f74b11ca7b5a81575427768beebc3f5b

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

No remaining Unresolved Commits.

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 

Saving into BaselineCommit: d4fbf466f74b11ca7b5a81575427768beebc3f5b

=============================== Cleanup ===============================

Removing all generated output
	REMOVING: a38df744233769a1888462f2616bd9d8c007fcf5
	REMOVING: d4fbf466f74b11ca7b5a81575427768beebc3f5b

================== Unresolved Commit Status ==================

No remaining Unresolved Commits.

Exiting with code: 0
</span><span class="pipeline-new-node" nodeId="20" startId="18">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="21" startId="17">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="22" startId="11">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="23" startId="10">[Pipeline] // withEnv
</span><span class="pipeline-new-node" nodeId="24" startId="4">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="25" startId="3">[Pipeline] // node
</span><span class="pipeline-new-node" nodeId="26" startId="2">[Pipeline] End of Pipeline
</span>Finished: SUCCESS