Started by an SCM change Obtained jenkins_tests/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/Jenkinsfile from git https://github.com/larson-group/clubb.git Running in Durability level: MAX_SURVIVABILITY [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor Running on Jenkins in /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 1.8.3.1' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision e000e918d50566e48e2e35d43e7c7ad76a0e38cd (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f e000e918d50566e48e2e35d43e7c7ad76a0e38cd # timeout=10 Commit message: "Adding line to readme because previous commit will be BIT_CHANGING:108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 in the backwards compatibility run since it will prevent NaNs in the .nc files." > git rev-list --no-walk 1cda981a58d39a171f155a4987cec616db96d36b # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Clone SysAdmin to tmp) [Pipeline] sh + rm -rf /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin + git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin Cloning into '/home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin'... [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + python3 /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/bit_diff_clubb_bc_r8092_config ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_gfdlact.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32: 2520 | subroutine init_parameters_999( & | ^ Warning: ‘init_parameters_999’ defined but not used [-Wunused-function] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23: 139 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_param.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_lapack.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libmicrophys_utils.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_parabolic.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_KK_microphys.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_bugsrad.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62: 633 | do category=1, num_importance_categories | 2 ...... 638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then | 1 Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_coamps.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:327:13: 327 | rho_ds_zt, & ! Unused | 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libsilhs.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_morrison.a ../src/Benchmark_cases/cloud_sed_module.F90:168:44: 168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then | 1 Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination] ../src/KK_microphys_module.F90:43:35: 43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In | 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_other.a ../src/G_unit_test_types/w_up_in_cloud_tests.F90:24:8: 24 | use clubb_precision, only: & | 1 Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. 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Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/8072476e7423607a78acd991f13442ceb4bcd521. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/1cda981a58d39a171f155a4987cec616db96d36b. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files Diffing rico netCDF (*.nc) files Diffing twp_ice netCDF (*.nc) files Diffing wangara netCDF (*.nc) files There were no differences detected! ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32: 2520 | subroutine init_parameters_999( & | ^ Warning: ‘init_parameters_999’ defined but not used [-Wunused-function] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23: 139 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:327:13: 327 | rho_ds_zt, & ! Unused | 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ../src/KK_microphys_module.F90:43:35: 43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In | 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/31351cc3d78ba5f7fc722628e1f23889bd55ef14. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/8072476e7423607a78acd991f13442ceb4bcd521. Diffing arm netCDF (*.nc) files *** Differences detected in arm_zt.nc! *** *** Differences detected in arm_zm.nc! *** *** Differences detected in arm_sfc.nc! *** Diffing arm_97 netCDF (*.nc) files *** Differences detected in arm_97_zt.nc! *** *** Differences detected in arm_97_zm.nc! *** *** Differences detected in arm_97_sfc.nc! *** Diffing atex netCDF (*.nc) files *** Differences detected in atex_zt.nc! *** *** Differences detected in atex_zm.nc! *** *** Differences detected in atex_sfc.nc! *** Diffing bomex netCDF (*.nc) files *** Differences detected in bomex_zt.nc! *** *** Differences detected in bomex_zm.nc! *** *** Differences detected in bomex_sfc.nc! *** Diffing dycoms2_rf01 netCDF (*.nc) files *** Differences detected in dycoms2_rf01_zt.nc! *** *** Differences detected in dycoms2_rf01_zm.nc! *** *** Differences detected in dycoms2_rf01_sfc.nc! *** Diffing dycoms2_rf02_ds netCDF (*.nc) files *** Differences detected in dycoms2_rf02_ds_zt.nc! *** *** Differences detected in dycoms2_rf02_ds_zm.nc! *** *** Differences detected in dycoms2_rf02_ds_sfc.nc! *** Diffing gabls3_night netCDF (*.nc) files *** Differences detected in gabls3_night_zt.nc! *** *** Differences detected in gabls3_night_zm.nc! *** *** Differences detected in gabls3_night_sfc.nc! *** Diffing lba netCDF (*.nc) files *** Differences detected in lba_zt.nc! *** *** Differences detected in lba_zm.nc! *** *** Differences detected in lba_sfc.nc! *** Diffing rico netCDF (*.nc) files *** Differences detected in rico_zt.nc! *** *** Differences detected in rico_zm.nc! *** *** Differences detected in rico_sfc.nc! *** Diffing twp_ice netCDF (*.nc) files *** Differences detected in twp_ice_zt.nc! *** *** Differences detected in twp_ice_zm.nc! *** *** Differences detected in twp_ice_sfc.nc! *** Diffing wangara netCDF (*.nc) files *** Differences detected in wangara_zt.nc! *** *** Differences detected in wangara_zm.nc! *** *** Differences detected in wangara_sfc.nc! *** There were some differences detected! There were differences detected in netCDF (*.nc) files. ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/067d5ca5d065d2f62e06ea713ac73125ba692eaf. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/31351cc3d78ba5f7fc722628e1f23889bd55ef14. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files *** Differences detected in arm_97_zt.nc! *** *** Differences detected in arm_97_zm.nc! *** *** Differences detected in arm_97_sfc.nc! *** Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files *** Differences detected in dycoms2_rf02_ds_zt.nc! *** *** Differences detected in dycoms2_rf02_ds_zm.nc! *** *** Differences detected in dycoms2_rf02_ds_sfc.nc! *** Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files *** Differences detected in lba_zt.nc! *** *** Differences detected in lba_zm.nc! *** *** Differences detected in lba_sfc.nc! *** Diffing rico netCDF (*.nc) files *** Differences detected in rico_zt.nc! *** *** Differences detected in rico_zm.nc! *** *** Differences detected in rico_sfc.nc! *** Diffing twp_ice netCDF (*.nc) files *** Differences detected in twp_ice_zt.nc! *** *** Differences detected in twp_ice_zm.nc! *** *** Differences detected in twp_ice_sfc.nc! *** Diffing wangara netCDF (*.nc) files There were some differences detected! There were differences detected in netCDF (*.nc) files. ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32: 2520 | subroutine init_parameters_999( & | ^ Warning: ‘init_parameters_999’ defined but not used [-Wunused-function] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23: 139 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:327:13: 327 | rho_ds_zt, & ! Unused | 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ../src/KK_microphys_module.F90:43:35: 43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In | 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/3f4e66923a460e96c51d1473153aba6ce1c9c78a. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/067d5ca5d065d2f62e06ea713ac73125ba692eaf. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files Diffing rico netCDF (*.nc) files Diffing twp_ice netCDF (*.nc) files Diffing wangara netCDF (*.nc) files There were no differences detected! Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/3f4e66923a460e96c51d1473153aba6ce1c9c78a. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/067d5ca5d065d2f62e06ea713ac73125ba692eaf. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files Diffing rico netCDF (*.nc) files Diffing twp_ice netCDF (*.nc) files Diffing wangara netCDF (*.nc) files There were no differences detected! ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23: 139 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/108f6ea2c8b3d9357cf551b11a85a2d9a4becc47. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/3f4e66923a460e96c51d1473153aba6ce1c9c78a. Diffing arm netCDF (*.nc) files *** Differences detected in arm_zm.nc! *** Diffing arm_97 netCDF (*.nc) files *** Differences detected in arm_97_zm.nc! *** Diffing atex netCDF (*.nc) files *** Differences detected in atex_zm.nc! *** Diffing bomex netCDF (*.nc) files *** Differences detected in bomex_zm.nc! *** Diffing dycoms2_rf01 netCDF (*.nc) files *** Differences detected in dycoms2_rf01_zm.nc! *** Diffing dycoms2_rf02_ds netCDF (*.nc) files *** Differences detected in dycoms2_rf02_ds_zm.nc! *** Diffing gabls3_night netCDF (*.nc) files *** Differences detected in gabls3_night_zm.nc! *** Diffing lba netCDF (*.nc) files *** Differences detected in lba_zm.nc! *** Diffing rico netCDF (*.nc) files *** Differences detected in rico_zm.nc! *** Diffing twp_ice netCDF (*.nc) files *** Differences detected in twp_ice_zm.nc! *** Diffing wangara netCDF (*.nc) files *** Differences detected in wangara_zm.nc! *** There were some differences detected! There were differences detected in netCDF (*.nc) files. ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. =============================== Configuring Test =============================== Working directory set to: . Trying to clone repo... Cloned repo location: /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo Output Save Mode: none Using branch: master Commits to test vs the baseline (1cda981a58d39a171f155a4987cec616db96d36b) 8072476e7423607a78acd991f13442ceb4bcd521 31351cc3d78ba5f7fc722628e1f23889bd55ef14 bcb29622c6699771d244bab3345a7e7ea70ea323 067d5ca5d065d2f62e06ea713ac73125ba692eaf 3f4e66923a460e96c51d1473153aba6ce1c9c78a 108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 e000e918d50566e48e2e35d43e7c7ad76a0e38cd Making list from 'UnresolvedCommits': Run Output Path: repo/output Run commands: ['repo/compile/compile.bash', '\nrm -rf repo/output', 'mkdir repo/output', '\ncp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters', '\nrepo/run_scripts/run_scm_all.bash --min-cases'] Diffing command: repo/run_scripts/run_bindiff_all.bash =============================== Running Test =============================== Parsing message from commit: 8072476e7423607a78acd991f13442ceb4bcd521 Parsing message from commit: 31351cc3d78ba5f7fc722628e1f23889bd55ef14 Found: BIT_CHANGING Parsing message from commit: bcb29622c6699771d244bab3345a7e7ea70ea323 Parsing message from commit: 067d5ca5d065d2f62e06ea713ac73125ba692eaf Parsing message from commit: 3f4e66923a460e96c51d1473153aba6ce1c9c78a Found: BIT_CHANGING Parsing message from commit: 108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 Parsing message from commit: e000e918d50566e48e2e35d43e7c7ad76a0e38cd Found: BIT_CHANGING:108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 Checking Commit: 8072476e7423607a78acd991f13442ceb4bcd521 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 31351cc3d78ba5f7fc722628e1f23889bd55ef14 Checking out 8072476e7423607a78acd991f13442ceb4bcd521 Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Checking out 1cda981a58d39a171f155a4987cec616db96d36b Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Diffing: 'repo/run_scripts/run_bindiff_all.bash 8072476e7423607a78acd991f13442ceb4bcd521 1cda981a58d39a171f155a4987cec616db96d36b' Checking out 31351cc3d78ba5f7fc722628e1f23889bd55ef14 Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Output from 8072476e7423607a78acd991f13442ceb4bcd521 already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 31351cc3d78ba5f7fc722628e1f23889bd55ef14 8072476e7423607a78acd991f13442ceb4bcd521' Commit '31351cc3d78ba5f7fc722628e1f23889bd55ef14' is BIT_CHANGING and properly labelled as such. Checking Commit: bcb29622c6699771d244bab3345a7e7ea70ea323 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 067d5ca5d065d2f62e06ea713ac73125ba692eaf Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 3f4e66923a460e96c51d1473153aba6ce1c9c78a Checking out 067d5ca5d065d2f62e06ea713ac73125ba692eaf Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Output from 31351cc3d78ba5f7fc722628e1f23889bd55ef14 already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 067d5ca5d065d2f62e06ea713ac73125ba692eaf 31351cc3d78ba5f7fc722628e1f23889bd55ef14'  ISSUE WITH COMMIT DETECTED: 067d5ca5d065d2f62e06ea713ac73125ba692eaf differs from 31351cc3d78ba5f7fc722628e1f23889bd55ef14 Checking out 3f4e66923a460e96c51d1473153aba6ce1c9c78a Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Output from 067d5ca5d065d2f62e06ea713ac73125ba692eaf already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 3f4e66923a460e96c51d1473153aba6ce1c9c78a 067d5ca5d065d2f62e06ea713ac73125ba692eaf'  WARNING: commit '3f4e66923a460e96c51d1473153aba6ce1c9c78a' was supposed to be BIT_CHANGING, but is not. Checking Commit: 108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 Output from 3f4e66923a460e96c51d1473153aba6ce1c9c78a already saved Output from 067d5ca5d065d2f62e06ea713ac73125ba692eaf already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 3f4e66923a460e96c51d1473153aba6ce1c9c78a 067d5ca5d065d2f62e06ea713ac73125ba692eaf' Checking out 108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Output from 3f4e66923a460e96c51d1473153aba6ce1c9c78a already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 3f4e66923a460e96c51d1473153aba6ce1c9c78a' Commit '108f6ea2c8b3d9357cf551b11a85a2d9a4becc47' is BIT_CHANGING and properly labelled as such. Checking Commit: e000e918d50566e48e2e35d43e7c7ad76a0e38cd Running: final commit to check, not labelled BIT_CHANGING Checking out e000e918d50566e48e2e35d43e7c7ad76a0e38cd Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Output from 108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 already savedDirectory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/e000e918d50566e48e2e35d43e7c7ad76a0e38cd. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/108f6ea2c8b3d9357cf551b11a85a2d9a4becc47. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files Diffing rico netCDF (*.nc) files Diffing twp_ice netCDF (*.nc) files Diffing wangara netCDF (*.nc) files There were no differences detected! ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32: 2520 | subroutine init_parameters_999( & | ^ Warning: ‘init_parameters_999’ defined but not used [-Wunused-function] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23: 139 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:327:13: 327 | rho_ds_zt, & ! Unused | 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ../src/KK_microphys_module.F90:43:35: 43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In | 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/bcb29622c6699771d244bab3345a7e7ea70ea323. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/31351cc3d78ba5f7fc722628e1f23889bd55ef14. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files Diffing rico netCDF (*.nc) files Diffing twp_ice netCDF (*.nc) files Diffing wangara netCDF (*.nc) files There were no differences detected! Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/067d5ca5d065d2f62e06ea713ac73125ba692eaf. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/bcb29622c6699771d244bab3345a7e7ea70ea323. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files *** Differences detected in arm_97_zt.nc! *** *** Differences detected in arm_97_zm.nc! *** *** Differences detected in arm_97_sfc.nc! *** Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files *** Differences detected in dycoms2_rf02_ds_zt.nc! *** *** Differences detected in dycoms2_rf02_ds_zm.nc! *** *** Differences detected in dycoms2_rf02_ds_sfc.nc! *** Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files *** Differences detected in lba_zt.nc! *** *** Differences detected in lba_zm.nc! *** *** Differences detected in lba_sfc.nc! *** Diffing rico netCDF (*.nc) files *** Differences detected in rico_zt.nc! *** *** Differences detected in rico_zm.nc! *** *** Differences detected in rico_sfc.nc! *** Diffing twp_ice netCDF (*.nc) files *** Differences detected in twp_ice_zt.nc! *** *** Differences detected in twp_ice_zm.nc! *** *** Differences detected in twp_ice_sfc.nc! *** Diffing wangara netCDF (*.nc) files There were some differences detected! There were differences detected in netCDF (*.nc) files. Diffing: 'repo/run_scripts/run_bindiff_all.bash e000e918d50566e48e2e35d43e7c7ad76a0e38cd 108f6ea2c8b3d9357cf551b11a85a2d9a4becc47' Finding all BIT_CHANGING commits in range: 31351cc3d78ba5f7fc722628e1f23889bd55ef14...067d5ca5d065d2f62e06ea713ac73125ba692eaf Checking out bcb29622c6699771d244bab3345a7e7ea70ea323 Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Output from 31351cc3d78ba5f7fc722628e1f23889bd55ef14 already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash bcb29622c6699771d244bab3345a7e7ea70ea323 31351cc3d78ba5f7fc722628e1f23889bd55ef14' Output from 067d5ca5d065d2f62e06ea713ac73125ba692eaf already saved Output from bcb29622c6699771d244bab3345a7e7ea70ea323 already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 067d5ca5d065d2f62e06ea713ac73125ba692eaf bcb29622c6699771d244bab3345a7e7ea70ea323' Found: 067d5ca5d065d2f62e06ea713ac73125ba692eaf =============================== Test Results =============================== Commit Range Checked = 1cda981a58d39a171f155a4987cec616db96d36b...e000e918d50566e48e2e35d43e7c7ad76a0e38cd New Unresolved Commits: 067d5ca5d065d2f62e06ea713ac73125ba692eaf Fake BIT_CHANGING Commits: 3f4e66923a460e96c51d1473153aba6ce1c9c78a Remaining Unresolved Commits (oldest commit is listed first): 067d5ca5d065d2f62e06ea713ac73125ba692eaf =============================== Updating Config File =============================== Saving into UnresolvedCommits: 067d5ca5d065d2f62e06ea713ac73125ba692eaf Saving into BaselineCommit: e000e918d50566e48e2e35d43e7c7ad76a0e38cd =============================== Cleanup =============================== Removed repo. Removing all generated output REMOVING: 1cda981a58d39a171f155a4987cec616db96d36b REMOVING: 8072476e7423607a78acd991f13442ceb4bcd521 REMOVING: 31351cc3d78ba5f7fc722628e1f23889bd55ef14 REMOVING: bcb29622c6699771d244bab3345a7e7ea70ea323 REMOVING: 067d5ca5d065d2f62e06ea713ac73125ba692eaf REMOVING: 3f4e66923a460e96c51d1473153aba6ce1c9c78a REMOVING: 108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 REMOVING: e000e918d50566e48e2e35d43e7c7ad76a0e38cd ================== Unresolved Commit Status ================== Remaining Unresolved Commits (oldest commit is listed first): 067d5ca5d065d2f62e06ea713ac73125ba692eaf Exiting with code: 1 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] } [Pipeline] // script [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 1 Finished: FAILURE