Started by an SCM change
Obtained jenkins_tests/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/Jenkinsfile from git <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a>
<span class="pipeline-new-node" nodeId="2" startId="2">[Pipeline] Start of Pipeline
</span><span class="pipeline-new-node" nodeId="3" startId="3" enclosingId="2">[Pipeline] node
</span><span class="pipeline-node-3">Running on <a href='/jenkins/computer/mitch/' class='jenkins-table__link model-link model-link--float'>mitch</a> in /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test
</span><span class="pipeline-new-node" nodeId="4" startId="4" enclosingId="3">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="5" startId="5" enclosingId="4">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="6" startId="6" enclosingId="5" label="Declarative: Checkout SCM">[Pipeline] { (Declarative: Checkout SCM)
</span><span class="pipeline-new-node" nodeId="7" enclosingId="6">[Pipeline] checkout
</span><span class="pipeline-node-7">The recommended git tool is: git
Cloning the remote Git repository
Cloning repository <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a>
 &gt; git init /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test # timeout=10
Fetching upstream changes from <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.34.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 &gt; git fetch --tags --force --progress -- <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
Checking out Revision de4b158da241ce4321c6fb9c3e2d3bdd0fff15ce (refs/remotes/origin/master)
Commit message: "Fixing the run agent to be carson, since it has the only GPU capable of running with openmp gpu offloading."
 &gt; git config remote.origin.url <a href='https://github.com/larson-group/clubb.git'>https://github.com/larson-group/clubb.git</a> # timeout=10
 &gt; git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 &gt; git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f de4b158da241ce4321c6fb9c3e2d3bdd0fff15ce # timeout=10
 &gt; git rev-list --no-walk 05c2978bb4fb2b7ec8e58ce73ff99ed7f94c3e32 # timeout=10
</span><span class="pipeline-new-node" nodeId="8" startId="6">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="9" startId="5">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="10" startId="10" enclosingId="4">[Pipeline] withEnv
</span><span class="pipeline-new-node" nodeId="11" startId="11" enclosingId="10">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="12" startId="12" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="13" startId="13" enclosingId="12" label="Clone SysAdmin to tmp">[Pipeline] { (Clone SysAdmin to tmp)
</span><span class="pipeline-new-node" nodeId="14" enclosingId="13">[Pipeline] sh
</span><span class="pipeline-node-14">+ rm -rf /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin
+ git clone <a href='https://github.com/larson-group/sys_admin.git'>https://github.com/larson-group/sys_admin.git</a> /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin
Cloning into '/home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin'...
</span><span class="pipeline-new-node" nodeId="15" startId="13">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="16" startId="12">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="17" startId="17" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="18" startId="18" enclosingId="17" label="Run Python Test">[Pipeline] { (Run Python Test)
</span><span class="pipeline-new-node" nodeId="19" enclosingId="18">[Pipeline] sh
</span><span class="pipeline-node-19">+ source /etc/profile.d/larson-group.sh
++ export PATH MANPATH LD_LIBRARY_PATH
++ export SVNROOT=<a href='http://carson.math.uwm.edu/repos'>http://carson.math.uwm.edu/repos</a>
++ SVNROOT=<a href='http://carson.math.uwm.edu/repos'>http://carson.math.uwm.edu/repos</a>
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z
++ LMOD_ROOT=/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z
++ source /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib
++ export GFORTRAN_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ GFORTRAN_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ export GFORTRAN_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ GFORTRAN_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ export GFORTRAN_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ GFORTRAN_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib
++ export IFORT_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ IFORT_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ export IFORT_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ IFORT_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ export IFORT_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ IFORT_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/usr/local/NETCDF-C-4.8.0-pgi/lib
+++ uname -s
+++ uname -m
++ export NVARCH=Linux_x86_64
++ NVARCH=Linux_x86_64
++ export NVCOMPILERS=/opt/nvidia/hpc_sdk
++ NVCOMPILERS=/opt/nvidia/hpc_sdk
++ export MANPATH=:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man
++ MANPATH=:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man
++ export CUDADIR=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/cuda/
++ CUDADIR=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/cuda/
++ export PGIFORTRAN_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ PGIFORTRAN_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ export PGI_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ PGI_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ export PGI_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ PGI_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ export PATH=/usr/lib/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ PATH=/usr/lib/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ export GNU_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ GNU_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ export GNU_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ GNU_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ export GNU_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ GNU_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ export INTEL_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ INTEL_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ export INTEL_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ INTEL_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ export INTEL_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ INTEL_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ export NVHPC_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ NVHPC_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ export NVHPC_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ NVHPC_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ export NVHPC_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ NVHPC_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl,
netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/bit_diff_clubb_bc_r8092_config

================== ERROR ==================
	There is no test type specified in the test configuration file

Please ensure '/home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/bit_diff_clubb_bc_r8092_config' has section and key:
		[Test Definitions]
		TestType = 'TEST TO RUN'

	Where 'TEST TO RUN' is one of the available tests.
	Run 'diff_test.py --list_available' to list available tests.
===========================================
</span><span class="pipeline-new-node" nodeId="20" startId="18">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="21" startId="17">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="22" startId="22" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="23" startId="23" enclosingId="22" label="Declarative: Post Actions">[Pipeline] { (Declarative: Post Actions)
</span><span class="pipeline-new-node" nodeId="24" startId="24" enclosingId="23">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="25" startId="25" enclosingId="24">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="26" enclosingId="25">[Pipeline] cleanWs
</span><span class="pipeline-node-26">[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
</span><span class="pipeline-new-node" nodeId="27" startId="25">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="28" startId="24">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="29" startId="29" enclosingId="23">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="30" startId="30" enclosingId="29">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="31" enclosingId="30">[Pipeline] emailext
</span><span class="pipeline-node-31">Sending email to: messnermet@uwm.edu
</span><span class="pipeline-new-node" nodeId="32" startId="30">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="33" startId="29">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="34" startId="23">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="35" startId="22">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="36" startId="11">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="37" startId="10">[Pipeline] // withEnv
</span><span class="pipeline-new-node" nodeId="38" startId="4">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="39" startId="3">[Pipeline] // node
</span><span class="pipeline-new-node" nodeId="40" startId="2">[Pipeline] End of Pipeline
</span>ERROR: script returned exit code 1
Finished: FAILURE