+ ulimit -s 8388608
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load nvhpc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_multi_col_gpu_nvhpc_test_config
CMake Warning:
Manually-specified variables were not used by the project:
NetCDF_C_INCLUDE_DIR
NetCDF_C_LIBRARY
NetCDF_Fortran_INCLUDE_DIR
NetCDF_Fortran_LIBRARY
Directory 1 is 4b6a1f233bafc1d0a52abf1924d830b2391a7407
Directory 2 is 034f61908b84f2574a06cc7da3db70d50696e69d
Using reporting threshold: 0.0
The following cases will be compared: ['arm', 'cobra', 'gabls3', 'mpace_b', 'rico_silhs']
================================================ arm ================================================
>The linux diff detected differences in arm_stats.nc<
>>No differences detected in the common fields in file arm_stats.nc<<
>>>Differences in linux diff but no differences in common variables detected for case arm.<<<
=====================================================================================================
================================================ cobra ================================================
>The linux diff detected differences in cobra_stats.nc<
>>No differences detected in the common fields in file cobra_stats.nc<<
>>>Differences in linux diff but no differences in common variables detected for case cobra.<<<
=====================================================================================================
================================================ gabls3 ================================================
>The linux diff detected differences in gabls3_stats.nc<
>>No differences detected in the common fields in file gabls3_stats.nc<<
>>>Differences in linux diff but no differences in common variables detected for case gabls3.<<<
=====================================================================================================
================================================ mpace_b ================================================
>The linux diff detected differences in mpace_b_stats.nc<
>>No differences detected in the common fields in file mpace_b_stats.nc<<
>>>Differences in linux diff but no differences in common variables detected for case mpace_b.<<<
=====================================================================================================
================================================ rico_silhs ================================================
>The linux diff detected differences in rico_silhs_stats.nc<
>>No differences detected in the common fields in file rico_silhs_stats.nc<<
>>>Differences in linux diff but no differences in common variables detected for case rico_silhs.<<<
=====================================================================================================
SUMMARY:
Differences detected by linux diff but no differences in the common variables of the netCDF files compared.
Pass: 5 cases ['arm', 'cobra', 'gabls3', 'mpace_b', 'rico_silhs']
Fail: 0 cases []
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test
Checking specified repo: /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test
Using /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test with origin https://github.com/larson-group/clubb.git
Output Save Mode: all
Using branch: master
Making list from 'UnresolvedCommits':
CheckRange = True: Getting commit range
Run Output Path: output
Run commands: ['python compile.py -gpu openacc -debug', '\nrm -rf output', '\nmkdir output', '\npython run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 arm', '\npython run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 rico_silhs', '\npython run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 cobra', '\npython run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 mpace_b', '\npython run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 gabls3']
Diffing command: run_scripts/run_bindiff_all.py
=============================== Running Test ===============================
Parsing message from commit: 4b6a1f233bafc1d0a52abf1924d830b2391a7407
Checking Commit: 4b6a1f233bafc1d0a52abf1924d830b2391a7407
Running: final commit to check, not labelled BIT_CHANGING
Checking out 4b6a1f233bafc1d0a52abf1924d830b2391a7407
Running: 'python compile.py -gpu openacc -debug'
Running: 'rm -rf output'
Running: 'mkdir output'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 arm'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 rico_silhs'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 cobra'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 mpace_b'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 gabls3'
Checking out 034f61908b84f2574a06cc7da3db70d50696e69d
Running: 'python compile.py -gpu openacc -debug'
Running: 'rm -rf output'
Running: 'mkdir output'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 arm'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 rico_silhs'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 cobra'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 mpace_b'
Running: 'python run_scripts/run_scm.py -override lh_straight_mc=true -multicol 4 gabls3'
Diffing: 'run_scripts/run_bindiff_all.py 4b6a1f233bafc1d0a52abf1924d830b2391a7407 034f61908b84f2574a06cc7da3db70d50696e69d'
=============================== Test Results ===============================
Commit Range Checked = 034f61908b84f2574a06cc7da3db70d50696e69d...4b6a1f233bafc1d0a52abf1924d830b2391a7407
No new Unresolved commits found.
No fake BIT_CHANGING commits found.
No remaining Unresolved Commits.
=============================== Updating Config File ===============================
Saving into UnresolvedCommits:
Saving into BaselineCommit: 4b6a1f233bafc1d0a52abf1924d830b2391a7407
=============================== Cleanup ===============================
Not removing any generated output.
RENAMING 4b6a1f233bafc1d0a52abf1924d830b2391a7407 to latest_revision_validated_4b6a1f233bafc1d0a52abf1924d830b2391a7407
================== Unresolved Commit Status ==================
No remaining Unresolved Commits.
Exiting with code: 0
