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+ ulimit -s 8388608
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load nvhpc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_multi_col_gpu_nvhpc_test_config
CMake Warning:
  Manually-specified variables were not used by the project:

    NetCDF_C_INCLUDE_DIR
    NetCDF_C_LIBRARY
    NetCDF_Fortran_INCLUDE_DIR
    NetCDF_Fortran_LIBRARY


Directory 1 is a1acd2bad4630dc5f48adc31966bc720b915d0e5
Directory 2 is 77d989d6d7397187825e263ed404e956c7598749
Using reporting threshold:  0.0 


The following cases will be compared: ['arm', 'cobra', 'gabls3', 'mpace_b', 'rico_silhs']


================================================ arm ================================================
>The linux diff detected differences in arm_stats.nc<
>>Differences above threshold were detected in the common fields in file arm_stats.nc<<
>>>Differences in common variables detected for case arm<<<

=====================================================================================================

================================================ cobra ================================================
>The linux diff detected differences in cobra_stats.nc<
>>Differences above threshold were detected in the common fields in file cobra_stats.nc<<
>>>Differences in common variables detected for case cobra<<<

=====================================================================================================

================================================ gabls3 ================================================
>The linux diff detected differences in gabls3_stats.nc<
>>Differences above threshold were detected in the common fields in file gabls3_stats.nc<<
>>>Differences in common variables detected for case gabls3<<<

=====================================================================================================

================================================ mpace_b ================================================
>The linux diff detected differences in mpace_b_stats.nc<
>>Differences above threshold were detected in the common fields in file mpace_b_stats.nc<<
>>>Differences in common variables detected for case mpace_b<<<

=====================================================================================================

================================================ rico_silhs ================================================
>The linux diff detected differences in rico_silhs_stats.nc<
>>Differences above threshold were detected in the common fields in file rico_silhs_stats.nc<<
>>>Differences in common variables detected for case rico_silhs<<<

=====================================================================================================

SUMMARY:
There were differences detected in the common variables in netCDF (*.nc) files.
Pass: 0 cases []
Fail: 5 cases ['arm', 'cobra', 'gabls3', 'mpace_b', 'rico_silhs']

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test
Checking specified repo: /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test

Using /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test with origin https://github.com/larson-group/clubb.git

Output Save Mode: all

Using branch: master

Making list from 'UnresolvedCommits':

CheckRange = True: Getting commit range

Run Output Path: output

Run commands: ['python compile.py -gpu openacc -debug', '\nrm -rf output', '\nmkdir output', "\nsed -i 's:lh_straight_mc.*:lh_straight_mc = true:g' input/tunable_parameters/configurable_model_flags.in", "\nsed -i 's:penta_solve_method.*:penta_solve_method = 2:g' input/tunable_parameters/configurable_model_flags.in", "\nsed -i 's:tridiag_solve_method.*:tridiag_solve_method = 2:g' input/tunable_parameters/configurable_model_flags.in", '\npython run_scripts/create_multi_col_params.py -n 4 -out_file run_scripts/clubb_params_multi_col.in', '\npython run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in arm', '\npython run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in rico_silhs', '\npython run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in cobra', '\npython run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in mpace_b', '\npython run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in gabls3']

Diffing command: run_scripts/run_bindiff_all.py

=============================== Running Test ===============================

Parsing message from commit: a1acd2bad4630dc5f48adc31966bc720b915d0e5
	Found: BIT_CHANGING

Checking Commit: a1acd2bad4630dc5f48adc31966bc720b915d0e5
	Checking out a1acd2bad4630dc5f48adc31966bc720b915d0e5
	Running: 'python compile.py -gpu openacc -debug'
	Running: 'rm -rf output'
	Running: 'mkdir output'
	Running: 'sed -i 's:lh_straight_mc.*:lh_straight_mc = true:g' input/tunable_parameters/configurable_model_flags.in'
	Running: 'sed -i 's:penta_solve_method.*:penta_solve_method = 2:g' input/tunable_parameters/configurable_model_flags.in'
	Running: 'sed -i 's:tridiag_solve_method.*:tridiag_solve_method = 2:g' input/tunable_parameters/configurable_model_flags.in'
	Running: 'python run_scripts/create_multi_col_params.py -n 4 -out_file run_scripts/clubb_params_multi_col.in'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in arm'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in rico_silhs'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in cobra'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in mpace_b'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in gabls3'
	Checking out 77d989d6d7397187825e263ed404e956c7598749
	Running: 'python compile.py -gpu openacc -debug'
	Running: 'rm -rf output'
	Running: 'mkdir output'
	Running: 'sed -i 's:lh_straight_mc.*:lh_straight_mc = true:g' input/tunable_parameters/configurable_model_flags.in'
	Running: 'sed -i 's:penta_solve_method.*:penta_solve_method = 2:g' input/tunable_parameters/configurable_model_flags.in'
	Running: 'sed -i 's:tridiag_solve_method.*:tridiag_solve_method = 2:g' input/tunable_parameters/configurable_model_flags.in'
	Running: 'python run_scripts/create_multi_col_params.py -n 4 -out_file run_scripts/clubb_params_multi_col.in'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in arm'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in rico_silhs'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in cobra'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in mpace_b'
	Running: 'python run_scripts/run_scm.py -params run_scripts/clubb_params_multi_col.in gabls3'
	Diffing: 'run_scripts/run_bindiff_all.py a1acd2bad4630dc5f48adc31966bc720b915d0e5 77d989d6d7397187825e263ed404e956c7598749'
	Commit 'a1acd2bad4630dc5f48adc31966bc720b915d0e5' is BIT_CHANGING and properly labelled as such.

=============================== Test Results ===============================

Commit Range Checked = 77d989d6d7397187825e263ed404e956c7598749...a1acd2bad4630dc5f48adc31966bc720b915d0e5

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

No remaining Unresolved Commits.

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 

Saving into BaselineCommit: a1acd2bad4630dc5f48adc31966bc720b915d0e5

=============================== Cleanup ===============================

Not removing any generated output.
	RENAMING a1acd2bad4630dc5f48adc31966bc720b915d0e5 to latest_revision_validated_a1acd2bad4630dc5f48adc31966bc720b915d0e5

================== Unresolved Commit Status ==================

No remaining Unresolved Commits.

Exiting with code: 0